F384292

General Info

Members Datasets Scaffolds Average Seq Length
281 201 562 544

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10139112|Ga0157369_101391122
Length 585
Sequence MQPDAALSDVCDWTDWPYLSCRAFDTFQSIASEDPTGDKPMDLFGQMMYAPLLLSSLLQQAARHSSKVEIVSRRVEGDIHRYTYRDCHIRSMQLANALTAYGIQPGDRIGTLAWNGYRHMEMYYGVSGIGAVCHTINPRLFAEQIAYIVNHAQDRFICFDMSFAPLVEQIAHQCPLVEKWIMLCDESALPETFAVPLESYETLIAGQPQAFDWPRFDEQRAAVLCYTSGTTGNPKGVLYSHRSLSLMAYGSALPDTLCLSATDTVAPVVPMFHVNAWGLPFSAPLVGAKLVLPGPKLDGESLWTLFEQEGVTFSAGVPTIWLGLVDYMRRAGKHSTHFKRAIVGGSACPPQLASSLRELGIKAVHAWGMTELSPLGTVCSPSHGYEEKSAEEQKCIEAKQGRAVPGIDLKIVGSGGVELPWDGKSAGDLMARGHWVLDRYYGVEQTALEDGWFSTGDVATIDSDGYMQITDRSKDVIKSGGEWISSIELEHVAMSHPEIESAACIGCEHPKWDERPLLIAVRRAGSTLSAQQLLAFYDGKVAKWWIPDDVVFVPEMPLTATGKLQKLVLKQRFGKYLVDAAKPSA

Samples

Sample ID Description Type Environment
1 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
32 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
84 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
88 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
100 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
107 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
108 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
114 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
115 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
119 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
129 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
130 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
133 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
142 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
143 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
148 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
149 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
150 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
151 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
152 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
153 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
154 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
155 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
156 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
157 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
182 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
183 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
184 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
189 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
190 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
191 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
192 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
193 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
194 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
195 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
196 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
197 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
198 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
199 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
200 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
201 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.09
Metatranscriptomes 0
Isolates 3.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.05
Nodule 1.42
Rhizoplane 6.05
Rhizosphere 79.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157369_10139112 3300013105 Bacteria 2569
2 JGI24737J22298_10010279 3300001990 Bacteria 3093
3 JGI24735J21928_10000081 3300002067 Bacteria 37373
4 Ga0055539_1000536 3300003752 Bacteria 11499
5 Ga0055529_1000897 3300003763 Bacteria 16606
6 Ga0065714_10078633 3300005288 Bacteria 2566
7 Ga0065715_10109605 3300005293 Bacteria 2661
8 Ga0070676_10006675 3300005328 Bacteria 6180
9 Ga0070670_100006278 3300005331 Bacteria 10062
10 Ga0070669_100005685 3300005353 Bacteria 8992
11 Ga0070675_100002409 3300005354 Bacteria 13948
12 Ga0070671_100002372 3300005355 Bacteria 14545
13 Ga0070673_100000783 3300005364 Bacteria 17703
14 Ga0070667_100008578 3300005367 Bacteria 8470
15 Ga0070705_100034321 3300005440 Bacteria 2835
16 Ga0070663_100090528 3300005455 Bacteria 2266
17 Ga0070678_100000813 3300005456 Bacteria 15768
18 Ga0068867_100000267 3300005459 Bacteria 34224
19 Ga0068867_100054842 3300005459 Bacteria 2945
20 Ga0070698_100169463 3300005471 Bacteria 2125
21 Ga0070672_100000327 3300005543 Bacteria 27160
22 Ga0068852_100000682 3300005616 Bacteria 22285
23 Ga0068861_100012378 3300005719 Bacteria 5949
24 Ga0068860_100000833 3300005843 Bacteria 34495
25 Ga0068862_100014165 3300005844 Bacteria 6611
26 Ga0075364_10017448 3300006051 Bacteria 4485
27 Ga0075432_10000132 3300006058 Bacteria 17091
28 Ga0075432_10003809 3300006058 Bacteria 5139
29 Ga0075432_10005930 3300006058 Bacteria 4156
30 Ga0075432_10017062 3300006058 Bacteria 2477
31 Ga0075362_10007594 3300006177 Bacteria 4117
32 Ga0097621_100002555 3300006237 Bacteria 12459
33 Ga0075370_10002247 3300006353 Bacteria 8890
34 Ga0075370_10063179 3300006353 Bacteria 2110
35 Ga0068871_100018893 3300006358 Bacteria 5252
36 Ga0068871_100043098 3300006358 Bacteria 3625
37 Ga0079104_1000276 3300006946 Bacteria 66810
38 Ga0105251_10000208 3300009011 Bacteria 59264
39 Ga0105251_10008585 3300009011 Bacteria 6130
40 Ga0105251_10023968 3300009011 Bacteria 3140
41 Ga0105240_10026514 3300009093 Bacteria 7604
42 Ga0105248_10041813 3300009177 Bacteria 5139
43 Ga0157374_10042466 3300013296 Bacteria 4194
44 Ga0157378_10011466 3300013297 Bacteria 7757
45 Ga0163162_10004915 3300013306 Bacteria 12885
46 Ga0163162_10006475 3300013306 Bacteria 11338
47 Ga0157375_10051270 3300013308 Bacteria 4052
48 Ga0182008_10000821 3300014497 Bacteria 21644
49 Ga0157376_10113951 3300014969 Bacteria 2385
50 Ga0182005_1001143 3300015265 Bacteria 11010
51 Ga0163161_10016729 3300017792 Bacteria 5125
52 Ga0213872_10000003 3300021361 Bacteria 366948
53 Ga0213872_10000008 3300021361 Bacteria 226283
54 Ga0213872_10001721 3300021361 Bacteria 13758
55 Ga0209566_100771 3300025225 Bacteria 17156
56 Ga0209674_101972 3300025226 Bacteria 4777
57 Ga0209672_101971 3300025228 Bacteria 5763
58 Ga0209258_103604 3300025242 Bacteria 3266
59 Ga0209677_100060 3300025253 Bacteria 155728
60 Ga0209455_1000481 3300025272 Bacteria 29736
61 Ga0209455_1000557 3300025272 Bacteria 25222
62 Ga0207426_1002308 3300025302 Bacteria 12536
63 Ga0209051_1004874 3300025303 Bacteria 8053
64 Ga0207697_10002987 3300025315 Bacteria 8532
65 Ga0207713_1001310 3300025735 Bacteria 20440
66 Ga0207713_1008157 3300025735 Bacteria 6064
67 Ga0207682_10001118 3300025893 Bacteria 12410
68 Ga0207688_10013230 3300025901 Bacteria 4485
69 Ga0207647_10014697 3300025904 Bacteria 5391
70 Ga0207643_10024438 3300025908 Bacteria 3334
71 Ga0207695_10073835 3300025913 Bacteria 3474
72 Ga0207681_10011662 3300025923 Bacteria 5403
73 Ga0207650_10000149 3300025925 Bacteria 83837
74 Ga0207659_10001012 3300025926 Bacteria 16727
75 Ga0207644_10014753 3300025931 Bacteria 5234
76 Ga0207691_10057601 3300025940 Bacteria 3536
77 Ga0207691_10081396 3300025940 Bacteria 2911
78 Ga0207711_10062271 3300025941 Bacteria 3218
79 Ga0207711_10091761 3300025941 Bacteria 2672
80 Ga0207679_10033183 3300025945 Bacteria 3631
81 Ga0207651_10003320 3300025960 Bacteria 7889
82 Ga0207658_10007387 3300025986 Bacteria 7494
83 Ga0207648_10000585 3300026089 Bacteria 40840
84 Ga0207675_100001560 3300026118 Bacteria 22970
85 Ga0207683_10003916 3300026121 Bacteria 12908
86 Ga0207698_10051490 3300026142 Bacteria 3148
87 Ga0209281_1000055 3300027111 Bacteria 308297
88 Ga0268264_10036756 3300028381 Bacteria 4035
89 Ga0307515_10001108 3300028794 Bacteria 61619
90 Ga0265327_10000035 3300031251 Bacteria 314419
91 Ga0265327_10009564 3300031251 Bacteria 6974
92 Ga0307408_100056085 3300031548 Bacteria 2856
93 Ga0307408_100118692 3300031548 Bacteria 2046
94 Ga0307516_10010503 3300031730 Bacteria 10168
95 Ga0307410_10045727 3300031852 Bacteria 2917
96 Ga0307409_100020704 3300031995 Bacteria 4490
97 Ga0373925_0002038 3300037068 Bacteria 16693
98 Ga0373925_0046012 3300037068 Bacteria 3243
99 Ga0395905_0040119 3300037471 Bacteria 4391
100 Ga0395905_0137265 3300037471 Bacteria 2301
101 Ga0436361_0001950 3300039447 Bacteria 15059
102 Ga0436361_0108557 3300039447 Bacteria 30764
103 Ga0436361_0449949 3300039447 Bacteria 9376
104 Ga0436361_0456054 3300039447 Bacteria 43376
105 Ga0450898_001565 3300042134 Bacteria 3048
106 Ga0450902_001424 3300042137 Bacteria 3261
107 Ga0450902_002125 3300042137 Bacteria 2789
108 Ga0451577_0007557 3300042876 Bacteria 10658
109 Ga0466969_0017456 3300044656 Bacteria 3746
110 Ga0466973_0015618 3300044659 Bacteria 7182
111 Ga0466965_0000166 3300044683 Bacteria 20014
112 Ga0466966_0005753 3300044684 Bacteria 8163
113 Ga0466961_0000559 3300044693 Bacteria 23654
114 Ga0466961_0004990 3300044693 Bacteria 8341
115 Ga0466963_0001135 3300044694 Bacteria 13912
116 Ga0453684_0000691 3300044712 Bacteria 120087
117 Ga0466971_0006192 3300044719 Bacteria 5200
118 Ga0466957_0078336 3300044842 Bacteria 2055
119 Ga0466959_0044590 3300045049 Bacteria 3267
120 Ga0466959_0075572 3300045049 Bacteria 2433
121 Ga0466958_0054119 3300045836 Bacteria 2433
122 Ga0495617_000164 3300046452 Bacteria 42308
123 Ga0495617_000274 3300046452 Bacteria 29813
124 Ga0495603_0004219 3300046455 Bacteria 8561
125 Ga0495590_0000178 3300046457 Bacteria 37358
126 Ga0495590_0003560 3300046457 Bacteria 6341
127 Ga0495591_000070 3300046458 Bacteria 116421
128 Ga0495629_0002672 3300046459 Bacteria 13643
129 Ga0495638_0002721 3300046460 Bacteria 14218
130 Ga0495638_0003529 3300046460 Bacteria 12274
131 Ga0495638_0005806 3300046460 Bacteria 9080
132 Ga0495651_0084564 3300046462 Bacteria 2390
133 Ga0495650_0001326 3300046471 Bacteria 24868
134 Ga0495650_0004411 3300046471 Bacteria 9664
135 Ga0495650_0017427 3300046471 Bacteria 3602
136 Ga0495580_0000183 3300046472 Bacteria 47213
137 Ga0495580_0025803 3300046472 Bacteria 4291
138 Ga0495580_0039009 3300046472 Bacteria 3398
139 Ga0495580_0059634 3300046472 Bacteria 2682
140 Ga0495605_0011603 3300046474 Bacteria 4905
141 Ga0495605_0014429 3300046474 Bacteria 4328
142 Ga0495639_0000882 3300046475 Bacteria 13586
143 Ga0495662_0021546 3300046476 Bacteria 3114
144 Ga0495664_0018762 3300046477 Bacteria 3969
145 Ga0495584_0003249 3300046491 Bacteria 9011
146 Ga0495585_0003142 3300046492 Bacteria 11312
147 Ga0495585_0003785 3300046492 Bacteria 10085
148 Ga0495585_0006848 3300046492 Bacteria 7031
149 Ga0495594_0015016 3300046499 Bacteria 4064
150 Ga0495596_0000036 3300046500 Bacteria 95842
151 Ga0495607_0014563 3300046501 Bacteria 5114
152 Ga0495607_0017643 3300046501 Bacteria 4574
153 Ga0495583_0000539 3300046506 Bacteria 53229
154 Ga0495583_0001677 3300046506 Bacteria 21430
155 Ga0495606_0002348 3300046507 Bacteria 22240
156 Ga0495606_0009935 3300046507 Bacteria 7965
157 Ga0495610_0003328 3300046512 Bacteria 12614
158 Ga0495610_0003441 3300046512 Bacteria 12326
159 Ga0495610_0008625 3300046512 Bacteria 6572
160 Ga0495616_0005638 3300046513 Bacteria 7664
161 Ga0495616_0013999 3300046513 Bacteria 4507
162 Ga0495620_0002045 3300046515 Bacteria 11750
163 Ga0495628_0029921 3300046516 Bacteria 4412
164 Ga0495630_0032638 3300046517 Bacteria 3880
165 Ga0495632_0008144 3300046519 Bacteria 6480
166 Ga0495632_0013744 3300046519 Bacteria 4606
167 Ga0495637_0000044 3300046520 Bacteria 111531
168 Ga0495637_0011951 3300046520 Bacteria 4161
169 Ga0495644_0000150 3300046523 Bacteria 33028
170 Ga0495644_0000187 3300046523 Bacteria 29107
171 Ga0495648_0002026 3300046524 Bacteria 19212
172 Ga0495648_0006624 3300046524 Bacteria 9392
173 Ga0495666_0005146 3300046526 Bacteria 6608
174 Ga0495666_0010105 3300046526 Bacteria 4707
175 Ga0495642_0008578 3300046528 Bacteria 3911
176 Ga0495642_0017674 3300046528 Bacteria 2786
177 Ga0495642_0017703 3300046528 Bacteria 2784
178 Ga0495654_0002014 3300046530 Bacteria 13376
179 Ga0495609_0003599 3300046538 Bacteria 8809
180 Ga0495609_0006840 3300046538 Bacteria 5762
181 Ga0495597_0001039 3300046542 Bacteria 21205
182 Ga0495597_0001458 3300046542 Bacteria 16938
183 Ga0495645_0002267 3300046543 Bacteria 13087
184 Ga0495645_0015143 3300046543 Bacteria 5482
185 Ga0495633_0000203 3300046558 Bacteria 75474
186 Ga0495633_0001691 3300046558 Bacteria 16581
187 Ga0495656_0000859 3300046615 Bacteria 9821
188 Ga0495656_0003074 3300046615 Bacteria 5607
189 Ga0495668_0000215 3300046616 Bacteria 83847
190 Ga0495611_0000624 3300046648 Bacteria 20400
191 Ga0495625_0008988 3300046660 Bacteria 8436
192 Ga0495625_0016569 3300046660 Bacteria 5794
193 Ga0495625_0105283 3300046660 Bacteria 1933
194 Ga0495588_0008625 3300046674 Bacteria 4684
195 Ga0495588_0059287 3300046674 Bacteria 1980
196 Ga0495599_0055625 3300046678 Bacteria 2477
197 Ga0495623_0027410 3300046679 Bacteria 3666
198 Ga0495646_0043877 3300046680 Bacteria 2736
199 Ga0495624_0011905 3300046690 Bacteria 5963
200 Ga0495624_0018401 3300046690 Bacteria 4672
201 Ga0495670_0000134 3300046691 Bacteria 31849
202 Ga0495670_0000960 3300046691 Bacteria 13963
203 Ga0495671_0002203 3300046692 Bacteria 12408
204 Ga0495671_0007580 3300046692 Bacteria 6173
205 Ga0495671_0020718 3300046692 Bacteria 3462
206 Ga0495649_0007790 3300046694 Bacteria 6497
207 Ga0495589_0003066 3300046794 Bacteria 9158
208 Ga0495660_0005711 3300046810 Bacteria 7428
209 Ga0495660_0033834 3300046810 Bacteria 2862
210 Ga0495581_0025452 3300047315 Bacteria 3431
211 Ga0495604_0044626 3300047317 Bacteria 3461
212 Ga0495674_0068772 3300047319 Bacteria 3064
213 Ga0495672_0000651 3300047320 Bacteria 38596
214 Ga0495672_0019540 3300047320 Bacteria 4466
215 Ga0495672_0022388 3300047320 Bacteria 4109
216 Ga0495680_0016772 3300047322 Bacteria 6280
217 Ga0495680_0028950 3300047322 Bacteria 4539
218 Ga0495683_0009195 3300047323 Bacteria 5266
219 Ga0495687_000022 3300047443 Bacteria 327353
220 Ga0495687_000289 3300047443 Bacteria 66117
221 Ga0495687_000580 3300047443 Bacteria 42930
222 Ga0495687_000680 3300047443 Bacteria 38646
223 Ga0495687_001189 3300047443 Bacteria 24990
224 Ga0495687_014411 3300047443 Bacteria 4073
225 Ga0495679_003110 3300047446 Bacteria 8123
226 Ga0495685_000087 3300047447 Bacteria 33971
227 Ga0495673_0002575 3300047469 Bacteria 12616
228 Ga0495681_0000328 3300047470 Bacteria 37644
229 Ga0495614_0014117 3300048089 Bacteria 3501
230 Ga0495626_0000167 3300048091 Bacteria 81076
231 Ga0495626_0001216 3300048091 Bacteria 21211
232 Ga0496100_0003378 3300048903 Bacteria 8315
233 Ga0496100_0012639 3300048903 Bacteria 4847
234 Ga0496101_0070579 3300048904 Bacteria 2558
235 Ga0496102_0001631 3300048905 Bacteria 19770
236 Ga0496102_0021883 3300048905 Bacteria 5660
237 Ga0496103_0000507 3300048906 Bacteria 32142
238 Ga0496104_0009943 3300048907 Bacteria 8491
239 Ga0496105_0023472 3300048908 Bacteria 5003
240 Ga0496106_0027304 3300048909 Bacteria 4251
241 Ga0496110_0024014 3300048913 Bacteria 5194
242 Ga0496110_0025439 3300048913 Bacteria 5058
243 Ga0496111_0001434 3300048914 Bacteria 13609
244 Ga0496113_0003311 3300048916 Bacteria 9620
245 Ga0496114_0008000 3300048917 Bacteria 8365
246 Ga0496114_0042002 3300048917 Bacteria 3789
247 Ga0496115_0091341 3300048918 Bacteria 2488
248 Ga0496116_0008773 3300048919 Bacteria 8720
249 Ga0496117_0031779 3300048920 Bacteria 4024
250 Ga0496118_0016289 3300048921 Bacteria 6826
251 Ga0496121_0001721 3300048924 Bacteria 35775
252 Ga0496122_0001147 3300048925 Bacteria 45447
253 Ga0496123_0024088 3300048926 Bacteria 4637
254 Ga0496124_0011453 3300048927 Bacteria 8865
255 Ga0496125_0002067 3300048928 Bacteria 27093
256 Ga0496125_0090231 3300048928 Bacteria 2301
257 Ga0496126_0015760 3300048929 Bacteria 7594
258 Ga0495678_000317 3300049459 Bacteria 51603
259 Ga0495678_001280 3300049459 Bacteria 20347
260 Ga0495678_004523 3300049459 Bacteria 8016
261 Ga0495682_0000013 3300049460 Bacteria 259670
262 Ga0495682_0000016 3300049460 Bacteria 233668
263 Ga0501298_002831 3300049521 Bacteria 2659
264 Ga0501032_0020401 3300049569 Bacteria 4616
265 Ga0501257_003518 3300049686 Bacteria 3368
266 Ga0501035_0005329 3300049822 Bacteria 12167
267 Ga0501044_0000485 3300049823 Bacteria 48260
268 nmdc:mga00v17_4949_c1 3300050491 Bacteria 5033
269 nmdc:mga07m45_62900_c1 3300050496 Bacteria 2104
270 Ga0466962_0000835 3300061719 Bacteria 13888
271 2537876980 2537561587 Bacteria 5425293
272 2599741973 2599185239 Bacteria 8686614
273 2643953310 2643221589 Bacteria 6250934
274 2644021050 2643221602 Bacteria 6249926
275 2644302548 2643221654 Bacteria 5273570
276 2739199323 2738543004 Bacteria 6381073
277 2776912555 2775507049 Bacteria 6284736
278 2842488998 2842482326 Bacteria 7212537
279 2870076795 2870068957 Bacteria 8925310
280 8002395505 8002392321 Bacteria 4159911
281 8055308114 8055301274 Bacteria 8587385
282 Ga0157369_10139112
283 JGI24737J22298_10010279
284 JGI24735J21928_10000081
285 Ga0055539_1000536
286 Ga0055529_1000897
287 Ga0065714_10078633
288 Ga0065715_10109605
289 Ga0070676_10006675
290 Ga0070670_100006278
291 Ga0070669_100005685
292 Ga0070675_100002409
293 Ga0070671_100002372
294 Ga0070673_100000783
295 Ga0070667_100008578
296 Ga0070705_100034321
297 Ga0070663_100090528
298 Ga0070678_100000813
299 Ga0068867_100000267
300 Ga0068867_100054842
301 Ga0070698_100169463
302 Ga0070672_100000327
303 Ga0068852_100000682
304 Ga0068861_100012378
305 Ga0068860_100000833
306 Ga0068862_100014165
307 Ga0075364_10017448
308 Ga0075432_10000132
309 Ga0075432_10003809
310 Ga0075432_10005930
311 Ga0075432_10017062
312 Ga0075362_10007594
313 Ga0097621_100002555
314 Ga0075370_10002247
315 Ga0075370_10063179
316 Ga0068871_100018893
317 Ga0068871_100043098
318 Ga0079104_1000276
319 Ga0105251_10000208
320 Ga0105251_10008585
321 Ga0105251_10023968
322 Ga0105240_10026514
323 Ga0105248_10041813
324 Ga0157374_10042466
325 Ga0157378_10011466
326 Ga0163162_10004915
327 Ga0163162_10006475
328 Ga0157375_10051270
329 Ga0182008_10000821
330 Ga0157376_10113951
331 Ga0182005_1001143
332 Ga0163161_10016729
333 Ga0213872_10000003
334 Ga0213872_10000008
335 Ga0213872_10001721
336 Ga0209566_100771
337 Ga0209674_101972
338 Ga0209672_101971
339 Ga0209258_103604
340 Ga0209677_100060
341 Ga0209455_1000481
342 Ga0209455_1000557
343 Ga0207426_1002308
344 Ga0209051_1004874
345 Ga0207697_10002987
346 Ga0207713_1001310
347 Ga0207713_1008157
348 Ga0207682_10001118
349 Ga0207688_10013230
350 Ga0207647_10014697
351 Ga0207643_10024438
352 Ga0207695_10073835
353 Ga0207681_10011662
354 Ga0207650_10000149
355 Ga0207659_10001012
356 Ga0207644_10014753
357 Ga0207691_10057601
358 Ga0207691_10081396
359 Ga0207711_10062271
360 Ga0207711_10091761
361 Ga0207679_10033183
362 Ga0207651_10003320
363 Ga0207658_10007387
364 Ga0207648_10000585
365 Ga0207675_100001560
366 Ga0207683_10003916
367 Ga0207698_10051490
368 Ga0209281_1000055
369 Ga0268264_10036756
370 Ga0307515_10001108
371 Ga0265327_10000035
372 Ga0265327_10009564
373 Ga0307408_100056085
374 Ga0307408_100118692
375 Ga0307516_10010503
376 Ga0307410_10045727
377 Ga0307409_100020704
378 Ga0373925_0002038
379 Ga0373925_0046012
380 Ga0395905_0040119
381 Ga0395905_0137265
382 Ga0436361_0001950
383 Ga0436361_0108557
384 Ga0436361_0449949
385 Ga0436361_0456054
386 Ga0450898_001565
387 Ga0450902_001424
388 Ga0450902_002125
389 Ga0451577_0007557
390 Ga0466969_0017456
391 Ga0466973_0015618
392 Ga0466965_0000166
393 Ga0466966_0005753
394 Ga0466961_0000559
395 Ga0466961_0004990
396 Ga0466963_0001135
397 Ga0453684_0000691
398 Ga0466971_0006192
399 Ga0466957_0078336
400 Ga0466959_0044590
401 Ga0466959_0075572
402 Ga0466958_0054119
403 Ga0495617_000164
404 Ga0495617_000274
405 Ga0495603_0004219
406 Ga0495590_0000178
407 Ga0495590_0003560
408 Ga0495591_000070
409 Ga0495629_0002672
410 Ga0495638_0002721
411 Ga0495638_0003529
412 Ga0495638_0005806
413 Ga0495651_0084564
414 Ga0495650_0001326
415 Ga0495650_0004411
416 Ga0495650_0017427
417 Ga0495580_0000183
418 Ga0495580_0025803
419 Ga0495580_0039009
420 Ga0495580_0059634
421 Ga0495605_0011603
422 Ga0495605_0014429
423 Ga0495639_0000882
424 Ga0495662_0021546
425 Ga0495664_0018762
426 Ga0495584_0003249
427 Ga0495585_0003142
428 Ga0495585_0003785
429 Ga0495585_0006848
430 Ga0495594_0015016
431 Ga0495596_0000036
432 Ga0495607_0014563
433 Ga0495607_0017643
434 Ga0495583_0000539
435 Ga0495583_0001677
436 Ga0495606_0002348
437 Ga0495606_0009935
438 Ga0495610_0003328
439 Ga0495610_0003441
440 Ga0495610_0008625
441 Ga0495616_0005638
442 Ga0495616_0013999
443 Ga0495620_0002045
444 Ga0495628_0029921
445 Ga0495630_0032638
446 Ga0495632_0008144
447 Ga0495632_0013744
448 Ga0495637_0000044
449 Ga0495637_0011951
450 Ga0495644_0000150
451 Ga0495644_0000187
452 Ga0495648_0002026
453 Ga0495648_0006624
454 Ga0495666_0005146
455 Ga0495666_0010105
456 Ga0495642_0008578
457 Ga0495642_0017674
458 Ga0495642_0017703
459 Ga0495654_0002014
460 Ga0495609_0003599
461 Ga0495609_0006840
462 Ga0495597_0001039
463 Ga0495597_0001458
464 Ga0495645_0002267
465 Ga0495645_0015143
466 Ga0495633_0000203
467 Ga0495633_0001691
468 Ga0495656_0000859
469 Ga0495656_0003074
470 Ga0495668_0000215
471 Ga0495611_0000624
472 Ga0495625_0008988
473 Ga0495625_0016569
474 Ga0495625_0105283
475 Ga0495588_0008625
476 Ga0495588_0059287
477 Ga0495599_0055625
478 Ga0495623_0027410
479 Ga0495646_0043877
480 Ga0495624_0011905
481 Ga0495624_0018401
482 Ga0495670_0000134
483 Ga0495670_0000960
484 Ga0495671_0002203
485 Ga0495671_0007580
486 Ga0495671_0020718
487 Ga0495649_0007790
488 Ga0495589_0003066
489 Ga0495660_0005711
490 Ga0495660_0033834
491 Ga0495581_0025452
492 Ga0495604_0044626
493 Ga0495674_0068772
494 Ga0495672_0000651
495 Ga0495672_0019540
496 Ga0495672_0022388
497 Ga0495680_0016772
498 Ga0495680_0028950
499 Ga0495683_0009195
500 Ga0495687_000022
501 Ga0495687_000289
502 Ga0495687_000580
503 Ga0495687_000680
504 Ga0495687_001189
505 Ga0495687_014411
506 Ga0495679_003110
507 Ga0495685_000087
508 Ga0495673_0002575
509 Ga0495681_0000328
510 Ga0495614_0014117
511 Ga0495626_0000167
512 Ga0495626_0001216
513 Ga0496100_0003378
514 Ga0496100_0012639
515 Ga0496101_0070579
516 Ga0496102_0001631
517 Ga0496102_0021883
518 Ga0496103_0000507
519 Ga0496104_0009943
520 Ga0496105_0023472
521 Ga0496106_0027304
522 Ga0496110_0024014
523 Ga0496110_0025439
524 Ga0496111_0001434
525 Ga0496113_0003311
526 Ga0496114_0008000
527 Ga0496114_0042002
528 Ga0496115_0091341
529 Ga0496116_0008773
530 Ga0496117_0031779
531 Ga0496118_0016289
532 Ga0496121_0001721
533 Ga0496122_0001147
534 Ga0496123_0024088
535 Ga0496124_0011453
536 Ga0496125_0002067
537 Ga0496125_0090231
538 Ga0496126_0015760
539 Ga0495678_000317
540 Ga0495678_001280
541 Ga0495678_004523
542 Ga0495682_0000013
543 Ga0495682_0000016
544 Ga0501298_002831
545 Ga0501032_0020401
546 Ga0501257_003518
547 Ga0501035_0005329
548 Ga0501044_0000485
549 nmdc:mga00v17_4949_c1
550 nmdc:mga07m45_62900_c1
551 Ga0466962_0000835
552 2537876980
553 2599741973
554 2643953310
555 2644021050
556 2644302548
557 2739199323
558 2776912555
559 2842488998
560 2870076795
561 8002395505
562 8055308114

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

488

563

0.98

PF00501

AMP-binding

AMP-binding enzyme

57

441

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ijb-assembly1.cif.gz_B structure of 3-methylmercaptopropionate coa ligase mutant k523a in complex with amp and mmpa 0.8813 5 521
6ijb-assembly1.cif.gz_B structure of 3-methylmercaptopropionate coa ligase mutant k523a in complex with amp and mmpa 0.8594 5 521
8g0r-assembly1.cif.gz_A crystal structure of acetyl-coa synthetase in complex with a cyclopentyl ester amp inhibitor from cryptococcus neoformans h99 0.8439 13 521
8g0v-assembly1.cif.gz_C crystal structure of acetyl-coa synthetase in complex with a propyne ester amp inhibitor from cryptococcus neoformans h99 0.842 13 519
7kdn-assembly3.cif.gz_C crystal structure of acetyl-coa synthetase in complex with adenosine-5'-propylphosphate from aspergillus fumigatus 0.8409 15 416
ID Description Score Start End Superfamily
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9592 420 517 3.30.300.30
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9524 422 487 3.30.300.30
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9496 419 516 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9488 420 513 3.30.300.30
af_Q2G2V3_396_492_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9474 418 513 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A3D5MRC7-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9615 416 519 GO:0016405
AF-A0A6J1WNS3-F1-model_v4 Luciferin 4-monooxygenase-like 0.9529 415 519 GO:0016405
AF-J1ZYK7-F1-model_v4 4-coumarate:CoA ligase 0.9324 428 521 GO:0016405
AF-A0A847A0P0-F1-model_v4 ATP-dependent acyl-CoA ligase 0.9297 394 516 GO:0016874
AF-A0A0B2ULI6-F1-model_v4 Acetyl-coenzyme A synthetase 0.9275 395 509 GO:0003987
GO:0006085

Map