F384235

General Info

Members Datasets Scaffolds Average Seq Length
281 186 562 316

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100001385|Ga0075436_10000138512
Length 371
Sequence MQGTLVARDSVKELPAMMLPSQGLIALPPAPHEAGPCLRKERLQLDVGAKMQIQPTISTIREAQKFLAKYFAPTRLIAAPFLSQRMGRKVFLKLETELPTGSFKVRGAFYALAERMKKSSVRRVVASSTGNHGAAVAYAAKEFGIAARIFLPAHCNPVKRGRIAGLGAEIVESGGSDLASAFELASEQAKQPGVCFLNDATDLDLPAGPATIACEVLEQLPKTTAILVPMGDTALIRGIAAATKQLAPHVRIIGVQAERAPAYYLSWKEGKVVGTETCDTIADGLATRTPEAANVQDVKNLVDDVVLVSEEGMLQAMGALVMEEHVVAEPAGAASTAALLKSSDGCGERPVLIVSGANVSREVLKRAIQTA

Samples

Sample ID Description Type Environment
1 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
29 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
30 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
31 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
32 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
39 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
40 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
47 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
48 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
49 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
52 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
53 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
54 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
55 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
56 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
57 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
58 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
59 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
60 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
61 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
62 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
63 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
64 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
65 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
66 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
67 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
68 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
69 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
70 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
71 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
72 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
77 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
78 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
79 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
80 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
81 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
84 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
85 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
89 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
90 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
91 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
92 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
93 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
94 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
95 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
96 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
97 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
98 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
99 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
143 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
144 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
145 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
146 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
147 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
148 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
149 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
150 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
151 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
152 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
153 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
154 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
155 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
156 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
157 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
158 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
159 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
160 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
161 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
162 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
176 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
180 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
181 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
184 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 6.05
Rhizosphere 93.59
Stem 0
Stem Tuber 0
Unclassified 14.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075436_100001385 3300006914 Bacteria 16483
2 MBSR1b_contig_9459148 2162886012 Bacteria 1816
3 JGI24752J21851_1001038 3300001976 Bacteria 3781
4 JGI24751J29686_10001566 3300002459 Bacteria 4725
5 Ga0065715_10092140 3300005293 Bacteria 5307
6 Ga0070683_100000496 3300005329 Bacteria 27786
7 Ga0070690_100001738 3300005330 Bacteria 11509
8 Ga0070670_100085018 3300005331 Bacteria 2718
9 Ga0068869_100043169 3300005334 Bacteria 3237
10 Ga0070666_10055185 3300005335 Bacteria 2681
11 Ga0070666_10195715 3300005335 Bacteria 1421
12 Ga0070682_100016556 3300005337 Bacteria 4289
13 Ga0068868_100132102 3300005338 Bacteria 2043
14 Ga0068868_100400483 3300005338 Bacteria 1184
15 Ga0070660_100003218 3300005339 Bacteria 11221
16 Ga0070660_100331494 3300005339 Unclassified 1251
17 Ga0070689_100005423 3300005340 Bacteria 8702
18 Ga0070687_100001786 3300005343 Bacteria 7773
19 Ga0070661_100043252 3300005344 Bacteria 3290
20 Ga0070692_10244045 3300005345 Unclassified 1072
21 Ga0070669_100033109 3300005353 Unclassified 3736
22 Ga0070669_100038564 3300005353 Bacteria 3469
23 Ga0070675_100017619 3300005354 Bacteria 5679
24 Ga0070675_100144874 3300005354 Bacteria 2033
25 Ga0070671_100126753 3300005355 Bacteria 2149
26 Ga0070674_100089650 3300005356 Bacteria 2216
27 Ga0070674_100245663 3300005356 Bacteria 1403
28 Ga0070673_100022037 3300005364 Bacteria 4630
29 Ga0070659_100003187 3300005366 Bacteria 11679
30 Ga0070659_100292610 3300005366 Bacteria 1356
31 Ga0070667_100026900 3300005367 Unclassified 4787
32 Ga0070667_100118902 3300005367 Unclassified 2297
33 Ga0070709_10205203 3300005434 Unclassified 1398
34 Ga0070714_100004540 3300005435 Bacteria 10462
35 Ga0070713_100045673 3300005436 Bacteria 3591
36 Ga0070713_100291782 3300005436 Bacteria 1499
37 Ga0070711_100008213 3300005439 Bacteria 6384
38 Ga0070705_100000538 3300005440 Bacteria 21910
39 Ga0070700_100098520 3300005441 Bacteria 1922
40 Ga0070694_100004840 3300005444 Bacteria 8105
41 Ga0070694_100113054 3300005444 Bacteria 1937
42 Ga0070708_100001975 3300005445 Bacteria 15803
43 Ga0070708_100002035 3300005445 Bacteria 15568
44 Ga0070663_100223154 3300005455 Bacteria 1480
45 Ga0070663_100371948 3300005455 Unclassified 1162
46 Ga0070662_100005457 3300005457 Bacteria 8124
47 Ga0068867_100003018 3300005459 Bacteria 11867
48 Ga0068867_100044903 3300005459 Bacteria 3238
49 Ga0070685_10023621 3300005466 Bacteria 3368
50 Ga0070706_100002569 3300005467 Bacteria 18253
51 Ga0070706_100003042 3300005467 Bacteria 16607
52 Ga0070707_100032950 3300005468 Bacteria 4938
53 Ga0070707_100158331 3300005468 Bacteria 2206
54 Ga0070707_100242059 3300005468 Bacteria 1756
55 Ga0070698_100004457 3300005471 Bacteria 15390
56 Ga0070698_100047838 3300005471 Unclassified 4372
57 Ga0070698_100224007 3300005471 Bacteria 1814
58 Ga0070699_100019617 3300005518 Bacteria 5824
59 Ga0070679_100107441 3300005530 Bacteria 2776
60 Ga0070684_100014252 3300005535 Bacteria 6433
61 Ga0070697_100001154 3300005536 Bacteria 20011
62 Ga0070697_100001898 3300005536 Bacteria 15979
63 Ga0070697_100065128 3300005536 Bacteria 2977
64 Ga0070697_100083827 3300005536 Unclassified 2629
65 Ga0068853_100085737 3300005539 Bacteria 2761
66 Ga0070672_100022386 3300005543 Bacteria 4642
67 Ga0070672_100142622 3300005543 Bacteria 1977
68 Ga0070686_100052869 3300005544 Bacteria 2591
69 Ga0070686_100159360 3300005544 Bacteria 1588
70 Ga0070695_100009001 3300005545 Bacteria 5934
71 Ga0070695_100023130 3300005545 Bacteria 3816
72 Ga0070696_100000576 3300005546 Bacteria 23446
73 Ga0070704_100002877 3300005549 Bacteria 9759
74 Ga0070704_100009062 3300005549 Bacteria 6003
75 Ga0068855_100105288 3300005563 Unclassified 3243
76 Ga0070664_100132448 3300005564 Bacteria 2190
77 Ga0070664_100286930 3300005564 Unclassified 1485
78 Ga0068857_100006445 3300005577 Bacteria 10063
79 Ga0068854_100067905 3300005578 Bacteria 2599
80 Ga0068854_100254335 3300005578 Unclassified 1404
81 Ga0068856_100084537 3300005614 Unclassified 3152
82 Ga0070702_100000146 3300005615 Bacteria 22142
83 Ga0068852_100084020 3300005616 Bacteria 2832
84 Ga0068859_100181047 3300005617 Bacteria 2190
85 Ga0068859_100296240 3300005617 Bacteria 1711
86 Ga0068864_100006601 3300005618 Bacteria 9495
87 Ga0068866_10002657 3300005718 Bacteria 7383
88 Ga0068866_10012558 3300005718 Bacteria 3693
89 Ga0068861_100001178 3300005719 Bacteria 16275
90 Ga0068861_100003279 3300005719 Bacteria 10708
91 Ga0068870_10011733 3300005840 Unclassified 4074
92 Ga0068870_10131741 3300005840 Unclassified 1453
93 Ga0068863_100006273 3300005841 Bacteria 11676
94 Ga0068863_100013534 3300005841 Bacteria 7870
95 Ga0068863_100074237 3300005841 Bacteria 3217
96 Ga0068860_100006885 3300005843 Bacteria 11399
97 Ga0068860_100044511 3300005843 Bacteria 4230
98 Ga0068862_100005112 3300005844 Bacteria 11027
99 Ga0070717_10110446 3300006028 Bacteria 2345
100 Ga0070716_100002673 3300006173 Bacteria 8242
101 Ga0070712_100120045 3300006175 Unclassified 1977
102 Ga0075430_100019588 3300006846 Bacteria 5756
103 Ga0075430_100023221 3300006846 Bacteria 5276
104 Ga0075430_100130084 3300006846 Unclassified 2098
105 Ga0075433_10070073 3300006852 Bacteria 3081
106 Ga0075433_10099973 3300006852 Bacteria 2567
107 Ga0075434_100010759 3300006871 Archaea 8592
108 Ga0075434_100061359 3300006871 Bacteria 3740
109 Ga0075434_100298823 3300006871 Bacteria 1630
110 Ga0075429_100025667 3300006880 Bacteria 5116
111 Ga0075429_100385604 3300006880 Bacteria 1227
112 Ga0068865_100309305 3300006881 Unclassified 1267
113 Ga0097620_100181037 3300006931 Bacteria 2190
114 Ga0097620_100296232 3300006931 Bacteria 1711
115 Ga0099794_10001957 3300007265 Bacteria 7415
116 Ga0099794_10016936 3300007265 Bacteria 3240
117 Ga0099794_10094584 3300007265 Bacteria 1486
118 Ga0111539_10046906 3300009094 Bacteria 5166
119 Ga0111539_10069879 3300009094 Bacteria 4146
120 Ga0111539_10109750 3300009094 Bacteria 3238
121 Ga0111539_10180889 3300009094 Unclassified 2462
122 Ga0105245_10011067 3300009098 Bacteria 7855
123 Ga0105245_10552402 3300009098 Unclassified 1174
124 Ga0114129_10001099 3300009147 Bacteria 35539
125 Ga0114129_10013715 3300009147 Bacteria 11549
126 Ga0114129_10214331 3300009147 Bacteria 2601
127 Ga0105243_10017293 3300009148 Bacteria 5452
128 Ga0105241_10055484 3300009174 Bacteria 3036
129 Ga0105242_10005259 3300009176 Bacteria 9991
130 Ga0105248_10005003 3300009177 Bacteria 14643
131 Ga0105248_10244567 3300009177 Bacteria 2019
132 Ga0105237_10064409 3300009545 Bacteria 3662
133 Ga0105249_10188793 3300009553 Bacteria 2010
134 Ga0105249_10307726 3300009553 Bacteria 1592
135 Ga0105239_10005619 3300010375 Bacteria 14660
136 Ga0105246_10002261 3300011119 Bacteria 11622
137 Ga0157373_10057297 3300013100 Bacteria 2764
138 Ga0157371_10007887 3300013102 Bacteria 8546
139 Ga0157374_10088497 3300013296 Bacteria 2949
140 Ga0157374_10218035 3300013296 Unclassified 1872
141 Ga0157378_10000589 3300013297 Bacteria 34091
142 Ga0163162_10047421 3300013306 Bacteria 4306
143 Ga0157372_10042527 3300013307 Bacteria 5026
144 Ga0157375_10050359 3300013308 Bacteria 4085
145 Ga0157375_10316880 3300013308 Bacteria 1724
146 Ga0163163_10003303 3300014325 Bacteria 13677
147 Ga0157380_10017455 3300014326 Bacteria 5311
148 Ga0182008_10013703 3300014497 Bacteria 4260
149 Ga0157377_10027206 3300014745 Bacteria 3068
150 Ga0157377_10059267 3300014745 Bacteria 2181
151 Ga0157379_10042214 3300014968 Bacteria 4072
152 Ga0163161_10002477 3300017792 Bacteria 13166
153 Ga0207697_10005534 3300025315 Bacteria 5856
154 Ga0207682_10056109 3300025893 Bacteria 1639
155 Ga0207692_10250881 3300025898 Unclassified 1060
156 Ga0207688_10033160 3300025901 Bacteria 2855
157 Ga0207680_10084354 3300025903 Bacteria 2004
158 Ga0207647_10001115 3300025904 Bacteria 20674
159 Ga0207685_10159873 3300025905 Unclassified 1028
160 Ga0207699_10222008 3300025906 Unclassified 1290
161 Ga0207645_10000471 3300025907 Bacteria 33296
162 Ga0207643_10000375 3300025908 Bacteria 30034
163 Ga0207684_10000859 3300025910 Bacteria 34855
164 Ga0207684_10011760 3300025910 Bacteria 7634
165 Ga0207654_10077662 3300025911 Bacteria 1991
166 Ga0207693_10000020 3300025915 Bacteria 132847
167 Ga0207693_10050547 3300025915 Bacteria 3264
168 Ga0207662_10001466 3300025918 Bacteria 11455
169 Ga0207657_10016000 3300025919 Bacteria 7242
170 Ga0207649_10000233 3300025920 Bacteria 45406
171 Ga0207646_10001994 3300025922 Bacteria 24538
172 Ga0207646_10029971 3300025922 Bacteria 4939
173 Ga0207646_10082281 3300025922 Unclassified 2879
174 Ga0207681_10006057 3300025923 Bacteria 7419
175 Ga0207681_10008795 3300025923 Bacteria 6169
176 Ga0207681_10176619 3300025923 Bacteria 1623
177 Ga0207650_10000107 3300025925 Bacteria 109863
178 Ga0207659_10172896 3300025926 Bacteria 1705
179 Ga0207687_10153016 3300025927 Bacteria 1762
180 Ga0207644_10017005 3300025931 Bacteria 4902
181 Ga0207644_10018020 3300025931 Unclassified 4774
182 Ga0207706_10000238 3300025933 Bacteria 60595
183 Ga0207706_10397212 3300025933 Bacteria 1196
184 Ga0207670_10006347 3300025936 Bacteria 6551
185 Ga0207704_10087726 3300025938 Bacteria 2033
186 Ga0207665_10000089 3300025939 Bacteria 59318
187 Ga0207665_10024191 3300025939 Bacteria 4004
188 Ga0207665_10053579 3300025939 Unclassified 2719
189 Ga0207665_10057709 3300025939 Unclassified 2623
190 Ga0207665_10167921 3300025939 Bacteria 1583
191 Ga0207691_10000751 3300025940 Bacteria 32082
192 Ga0207691_10008711 3300025940 Bacteria 9732
193 Ga0207691_10041010 3300025940 Bacteria 4276
194 Ga0207711_10006412 3300025941 Bacteria 9914
195 Ga0207689_10003153 3300025942 Bacteria 15125
196 Ga0207689_10155025 3300025942 Unclassified 1888
197 Ga0207661_10000138 3300025944 Bacteria 46093
198 Ga0207679_10000058 3300025945 Bacteria 101602
199 Ga0207679_10040466 3300025945 Bacteria 3337
200 Ga0207640_10264765 3300025981 Bacteria 1341
201 Ga0207658_10186605 3300025986 Bacteria 1720
202 Ga0207677_10072608 3300026023 Bacteria 2433
203 Ga0207678_10001492 3300026067 Bacteria 21439
204 Ga0207678_10093448 3300026067 Bacteria 2570
205 Ga0207641_10000163 3300026088 Bacteria 94033
206 Ga0207641_10001282 3300026088 Bacteria 25011
207 Ga0207641_10547589 3300026088 Bacteria 1128
208 Ga0207648_10062720 3300026089 Bacteria 3240
209 Ga0207674_10000336 3300026116 Bacteria 60214
210 Ga0207675_100004820 3300026118 Bacteria 12989
211 Ga0207675_100007961 3300026118 Bacteria 9994
212 Ga0207675_100294444 3300026118 Bacteria 1579
213 Ga0207683_10002065 3300026121 Bacteria 17759
214 Ga0207683_10168082 3300026121 Bacteria 1985
215 Ga0209588_1000377 3300027671 Bacteria 11613
216 Ga0209588_1000441 3300027671 Bacteria 10676
217 Ga0268265_10003363 3300028380 Bacteria 11528
218 Ga0268265_10009646 3300028380 Bacteria 6517
219 Ga0268264_10019207 3300028381 Bacteria 5585
220 Ga0268264_10160969 3300028381 Bacteria 2022
221 Ga0373946_0001091 3300035171 Bacteria 9371
222 Ga0373955_0079187 3300035172 Bacteria 1853
223 Ga0373927_0000199 3300035695 Bacteria 48441
224 Ga0373947_0010772 3300035725 Bacteria 5245
225 Ga0373937_0041978 3300036401 Unclassified 4174
226 Ga0373925_0000193 3300037068 Bacteria 66246
227 Ga0395905_0024153 3300037471 Bacteria 5737
228 Ga0395901_0454786 3300038443 Bacteria 1309
229 Ga0450896_012943 3300042133 Unclassified 1184
230 Ga0439434_0024061 3300042435 Bacteria 1836
231 Ga0495580_0041243 3300046472 Bacteria 3292
232 Ga0495580_0059635 3300046472 Bacteria 2682
233 Ga0495582_0064694 3300046473 Bacteria 2020
234 Ga0495662_0008427 3300046476 Bacteria 5071
235 Ga0495594_0030469 3300046499 Bacteria 2920
236 Ga0495666_0068667 3300046526 Bacteria 1687
237 Ga0495665_0131555 3300046531 Unclassified 1310
238 Ga0495640_0030408 3300046533 Unclassified 3866
239 Ga0495586_0005703 3300046535 Bacteria 6659
240 Ga0495587_0034759 3300046536 Unclassified 3038
241 Ga0495635_0072417 3300046663 Bacteria 2361
242 Ga0495581_0015262 3300047315 Bacteria 4459
243 Ga0495581_0089880 3300047315 Bacteria 1781
244 Ga0495684_0143254 3300047471 Unclassified 1791
245 Ga0496100_0045284 3300048903 Unclassified 2823
246 Ga0496101_0174248 3300048904 Unclassified 1654
247 Ga0496102_0037833 3300048905 Unclassified 4353
248 Ga0496106_0014495 3300048909 Bacteria 5824
249 Ga0496106_0307508 3300048909 Bacteria 1272
250 Ga0496107_0056109 3300048910 Bacteria 2846
251 Ga0496108_0000082 3300048911 Bacteria 101998
252 Ga0496108_0341857 3300048911 Bacteria 1306
253 Ga0496109_0000148 3300048912 Bacteria 69299
254 Ga0496110_0000377 3300048913 Bacteria 29876
255 Ga0496111_0000789 3300048914 Bacteria 16936
256 Ga0496112_0000151 3300048915 Bacteria 43735
257 Ga0496112_0203426 3300048915 Bacteria 1938
258 Ga0496112_0229299 3300048915 Bacteria 1812
259 Ga0496113_0001130 3300048916 Bacteria 14502
260 Ga0496115_0002849 3300048918 Bacteria 12449
261 Ga0496115_0006477 3300048918 Bacteria 8585
262 Ga0501069_0219770 3300049585 Bacteria 1104
263 nmdc:mga00v17_25803_c1 3300050491 Bacteria 3418
264 nmdc:mga05p37_1428_c1 3300050507 Bacteria 27771
265 nmdc:mga05p37_18442_c1 3300050507 Bacteria 8430
266 nmdc:mga09592_223115_c1 3300050508 Unclassified 1633
267 nmdc:mga0qj67_137873_c1 3300050509 Bacteria 1977
268 nmdc:mga0qj67_197369_c1 3300050509 Unclassified 1635
269 nmdc:mga0qj67_20228_c1 3300050509 Bacteria 5095
270 nmdc:mga08y16_201397_c1 3300050511 Bacteria 2063
271 nmdc:mga08y16_43518_c1 3300050511 Bacteria 4706
272 nmdc:mga0n895_129824_c1 3300050512 Bacteria 2545
273 nmdc:mga0n895_30958_c1 3300050512 Bacteria 5118
274 nmdc:mga0n895_4323_c1 3300050512 Bacteria 11644
275 nmdc:mga0rr50_10887_c1 3300050513 Bacteria 5798
276 nmdc:mga08x19_15577_c1 3300050514 Bacteria 4626
277 nmdc:mga08x19_930_c1 3300050514 Bacteria 18425
278 nmdc:mga0a205_119445_c1 3300050515 Bacteria 2535
279 nmdc:mga0a205_151181_c1 3300050515 Unclassified 2221
280 nmdc:mga0a205_41129_c1 3300050515 Bacteria 4451
281 Ga0495619_0291301 3300053085 Bacteria 1131
282 Ga0075436_100001385
283 MBSR1b_contig_9459148
284 JGI24752J21851_1001038
285 JGI24751J29686_10001566
286 Ga0065715_10092140
287 Ga0070683_100000496
288 Ga0070690_100001738
289 Ga0070670_100085018
290 Ga0068869_100043169
291 Ga0070666_10055185
292 Ga0070666_10195715
293 Ga0070682_100016556
294 Ga0068868_100132102
295 Ga0068868_100400483
296 Ga0070660_100003218
297 Ga0070660_100331494
298 Ga0070689_100005423
299 Ga0070687_100001786
300 Ga0070661_100043252
301 Ga0070692_10244045
302 Ga0070669_100033109
303 Ga0070669_100038564
304 Ga0070675_100017619
305 Ga0070675_100144874
306 Ga0070671_100126753
307 Ga0070674_100089650
308 Ga0070674_100245663
309 Ga0070673_100022037
310 Ga0070659_100003187
311 Ga0070659_100292610
312 Ga0070667_100026900
313 Ga0070667_100118902
314 Ga0070709_10205203
315 Ga0070714_100004540
316 Ga0070713_100045673
317 Ga0070713_100291782
318 Ga0070711_100008213
319 Ga0070705_100000538
320 Ga0070700_100098520
321 Ga0070694_100004840
322 Ga0070694_100113054
323 Ga0070708_100001975
324 Ga0070708_100002035
325 Ga0070663_100223154
326 Ga0070663_100371948
327 Ga0070662_100005457
328 Ga0068867_100003018
329 Ga0068867_100044903
330 Ga0070685_10023621
331 Ga0070706_100002569
332 Ga0070706_100003042
333 Ga0070707_100032950
334 Ga0070707_100158331
335 Ga0070707_100242059
336 Ga0070698_100004457
337 Ga0070698_100047838
338 Ga0070698_100224007
339 Ga0070699_100019617
340 Ga0070679_100107441
341 Ga0070684_100014252
342 Ga0070697_100001154
343 Ga0070697_100001898
344 Ga0070697_100065128
345 Ga0070697_100083827
346 Ga0068853_100085737
347 Ga0070672_100022386
348 Ga0070672_100142622
349 Ga0070686_100052869
350 Ga0070686_100159360
351 Ga0070695_100009001
352 Ga0070695_100023130
353 Ga0070696_100000576
354 Ga0070704_100002877
355 Ga0070704_100009062
356 Ga0068855_100105288
357 Ga0070664_100132448
358 Ga0070664_100286930
359 Ga0068857_100006445
360 Ga0068854_100067905
361 Ga0068854_100254335
362 Ga0068856_100084537
363 Ga0070702_100000146
364 Ga0068852_100084020
365 Ga0068859_100181047
366 Ga0068859_100296240
367 Ga0068864_100006601
368 Ga0068866_10002657
369 Ga0068866_10012558
370 Ga0068861_100001178
371 Ga0068861_100003279
372 Ga0068870_10011733
373 Ga0068870_10131741
374 Ga0068863_100006273
375 Ga0068863_100013534
376 Ga0068863_100074237
377 Ga0068860_100006885
378 Ga0068860_100044511
379 Ga0068862_100005112
380 Ga0070717_10110446
381 Ga0070716_100002673
382 Ga0070712_100120045
383 Ga0075430_100019588
384 Ga0075430_100023221
385 Ga0075430_100130084
386 Ga0075433_10070073
387 Ga0075433_10099973
388 Ga0075434_100010759
389 Ga0075434_100061359
390 Ga0075434_100298823
391 Ga0075429_100025667
392 Ga0075429_100385604
393 Ga0068865_100309305
394 Ga0097620_100181037
395 Ga0097620_100296232
396 Ga0099794_10001957
397 Ga0099794_10016936
398 Ga0099794_10094584
399 Ga0111539_10046906
400 Ga0111539_10069879
401 Ga0111539_10109750
402 Ga0111539_10180889
403 Ga0105245_10011067
404 Ga0105245_10552402
405 Ga0114129_10001099
406 Ga0114129_10013715
407 Ga0114129_10214331
408 Ga0105243_10017293
409 Ga0105241_10055484
410 Ga0105242_10005259
411 Ga0105248_10005003
412 Ga0105248_10244567
413 Ga0105237_10064409
414 Ga0105249_10188793
415 Ga0105249_10307726
416 Ga0105239_10005619
417 Ga0105246_10002261
418 Ga0157373_10057297
419 Ga0157371_10007887
420 Ga0157374_10088497
421 Ga0157374_10218035
422 Ga0157378_10000589
423 Ga0163162_10047421
424 Ga0157372_10042527
425 Ga0157375_10050359
426 Ga0157375_10316880
427 Ga0163163_10003303
428 Ga0157380_10017455
429 Ga0182008_10013703
430 Ga0157377_10027206
431 Ga0157377_10059267
432 Ga0157379_10042214
433 Ga0163161_10002477
434 Ga0207697_10005534
435 Ga0207682_10056109
436 Ga0207692_10250881
437 Ga0207688_10033160
438 Ga0207680_10084354
439 Ga0207647_10001115
440 Ga0207685_10159873
441 Ga0207699_10222008
442 Ga0207645_10000471
443 Ga0207643_10000375
444 Ga0207684_10000859
445 Ga0207684_10011760
446 Ga0207654_10077662
447 Ga0207693_10000020
448 Ga0207693_10050547
449 Ga0207662_10001466
450 Ga0207657_10016000
451 Ga0207649_10000233
452 Ga0207646_10001994
453 Ga0207646_10029971
454 Ga0207646_10082281
455 Ga0207681_10006057
456 Ga0207681_10008795
457 Ga0207681_10176619
458 Ga0207650_10000107
459 Ga0207659_10172896
460 Ga0207687_10153016
461 Ga0207644_10017005
462 Ga0207644_10018020
463 Ga0207706_10000238
464 Ga0207706_10397212
465 Ga0207670_10006347
466 Ga0207704_10087726
467 Ga0207665_10000089
468 Ga0207665_10024191
469 Ga0207665_10053579
470 Ga0207665_10057709
471 Ga0207665_10167921
472 Ga0207691_10000751
473 Ga0207691_10008711
474 Ga0207691_10041010
475 Ga0207711_10006412
476 Ga0207689_10003153
477 Ga0207689_10155025
478 Ga0207661_10000138
479 Ga0207679_10000058
480 Ga0207679_10040466
481 Ga0207640_10264765
482 Ga0207658_10186605
483 Ga0207677_10072608
484 Ga0207678_10001492
485 Ga0207678_10093448
486 Ga0207641_10000163
487 Ga0207641_10001282
488 Ga0207641_10547589
489 Ga0207648_10062720
490 Ga0207674_10000336
491 Ga0207675_100004820
492 Ga0207675_100007961
493 Ga0207675_100294444
494 Ga0207683_10002065
495 Ga0207683_10168082
496 Ga0209588_1000377
497 Ga0209588_1000441
498 Ga0268265_10003363
499 Ga0268265_10009646
500 Ga0268264_10019207
501 Ga0268264_10160969
502 Ga0373946_0001091
503 Ga0373955_0079187
504 Ga0373927_0000199
505 Ga0373947_0010772
506 Ga0373937_0041978
507 Ga0373925_0000193
508 Ga0395905_0024153
509 Ga0395901_0454786
510 Ga0450896_012943
511 Ga0439434_0024061
512 Ga0495580_0041243
513 Ga0495580_0059635
514 Ga0495582_0064694
515 Ga0495662_0008427
516 Ga0495594_0030469
517 Ga0495666_0068667
518 Ga0495665_0131555
519 Ga0495640_0030408
520 Ga0495586_0005703
521 Ga0495587_0034759
522 Ga0495635_0072417
523 Ga0495581_0015262
524 Ga0495581_0089880
525 Ga0495684_0143254
526 Ga0496100_0045284
527 Ga0496101_0174248
528 Ga0496102_0037833
529 Ga0496106_0014495
530 Ga0496106_0307508
531 Ga0496107_0056109
532 Ga0496108_0000082
533 Ga0496108_0341857
534 Ga0496109_0000148
535 Ga0496110_0000377
536 Ga0496111_0000789
537 Ga0496112_0000151
538 Ga0496112_0203426
539 Ga0496112_0229299
540 Ga0496113_0001130
541 Ga0496115_0002849
542 Ga0496115_0006477
543 Ga0501069_0219770
544 nmdc:mga00v17_25803_c1
545 nmdc:mga05p37_1428_c1
546 nmdc:mga05p37_18442_c1
547 nmdc:mga09592_223115_c1
548 nmdc:mga0qj67_137873_c1
549 nmdc:mga0qj67_197369_c1
550 nmdc:mga0qj67_20228_c1
551 nmdc:mga08y16_201397_c1
552 nmdc:mga08y16_43518_c1
553 nmdc:mga0n895_129824_c1
554 nmdc:mga0n895_30958_c1
555 nmdc:mga0n895_4323_c1
556 nmdc:mga0rr50_10887_c1
557 nmdc:mga08x19_15577_c1
558 nmdc:mga08x19_930_c1
559 nmdc:mga0a205_119445_c1
560 nmdc:mga0a205_151181_c1
561 nmdc:mga0a205_41129_c1
562 Ga0495619_0291301

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

67

356

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ve5-assembly1.cif.gz_A crystal structure of t.th. hb8 threonine deaminase 0.9306 3 305
5ybw-assembly1.cif.gz_A crystal structure of pyridoxal 5'-phosphate-dependent aspartate racemase 0.9296 3 308
5cvc-assembly1.cif.gz_A structure of maize serine racemase 0.9284 1 315
2gn2-assembly1.cif.gz_A crystal structure of tetrameric biodegradative threonine deaminase (tdcb) from salmonella typhimurium in complex with cmp at 2.5a resolution (hexagonal form) 0.9275 1 319
5ybw-assembly1.cif.gz_B crystal structure of pyridoxal 5'-phosphate-dependent aspartate racemase 0.9259 3 309
ID Description Score Start End Superfamily
1ve5C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9161 3 304 3.40.50.1100
1ve5C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9119 3 304 3.40.50.1100
2gn0D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9115 1 316 3.40.50.1100
af_P09367_100_172_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9111 75 138 3.40.50.1100
af_Q2FWJ9_55_154_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9065 51 145 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A2V9UZN2-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.9755 172 318 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
AF-X0SAI2-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.9626 74 315 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
AF-A0A832JTI1-F1-model_v4 deleted 0.9613 3 315
AF-A0A2T0B842-F1-model_v4 L-threonine dehydratase catabolic TdcB (EC 4.3.1.19) 0.9578 1 315 GO:0003941
GO:0004794
GO:0006565
GO:0009097
GO:0030170
GO:0070689
AF-A0A5K7YKM0-F1-model_v4 threonine ammonia-lyase (EC 4.3.1.19) 0.9576 80 253 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097

Map