F383889

General Info

Members Datasets Scaffolds Average Seq Length
280 188 560 320

Family's Representative Sequence

Representative Sequence 3300047320|Ga0495672_0010025|Ga0495672_0010025_5293_6444
Length 383
Sequence MTDASRTSQWLQLRSTADTVNESKHRGANARSIGRCDHPLYTQAGFTGESVMRSRLIISMVGVVMVSGPVLAQTPKQQRLNPVIGLLEQKQPVMGLYRPSNRQHGPATAAPVPAPQKSPLELAAQTVAYKSSDFVFDGSMEGNFDEAFPEFSAFAGALKQAGPLSRTPFLHLAHPMIVKIPLIAPDPSKAVTHISQQLNLGVSGVMFVGVESAEEVRQGLAAMRFKSKGGTRPDSVGTAPAFWGMSEQEYRQKADVWPLNPQGELINWTIVESKEGLQHVREIAAVKGIGVLWPGAGTLRQVFSTTGPDGKRVLDQAAWEAAIQQVLSACKEFNVPCGFPATPSDIEMRMKQGFSVFVMNWGDAGFTAAEIGRKAANRPTTNE

Samples

Sample ID Description Type Environment
1 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
130 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
137 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
138 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
139 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
140 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
141 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
142 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
143 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
144 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
145 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
146 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
147 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
148 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
149 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
150 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
151 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
152 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
153 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
154 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
155 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
156 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
157 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
158 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
159 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
160 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
165 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.64
Nodule 0
Rhizoplane 0.36
Rhizosphere 94.64
Stem 0
Stem Tuber 0
Unclassified 20.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495672_0010025 3300047320 Bacteria 6792
2 Ga0070683_100037750 3300005329 Bacteria 4423
3 Ga0070690_100073913 3300005330 Bacteria 2219
4 Ga0070670_100036378 3300005331 Bacteria 4236
5 Ga0070677_10062746 3300005333 Unclassified 1538
6 Ga0068869_100006341 3300005334 Bacteria 7492
7 Ga0070680_100005989 3300005336 Bacteria 9223
8 Ga0070680_100020364 3300005336 Bacteria 5266
9 Ga0070680_100083023 3300005336 Unclassified 2646
10 Ga0070680_100318954 3300005336 Unclassified 1319
11 Ga0070682_100016948 3300005337 Bacteria 4241
12 Ga0068868_100034192 3300005338 Bacteria 3924
13 Ga0070660_100022081 3300005339 Unclassified 4702
14 Ga0070660_100039263 3300005339 Bacteria 3598
15 Ga0070689_100016751 3300005340 Bacteria 5369
16 Ga0070661_100009004 3300005344 Bacteria 6907
17 Ga0070692_10087281 3300005345 Bacteria 1690
18 Ga0070692_10111418 3300005345 Unclassified 1514
19 Ga0070668_100354273 3300005347 Bacteria 1243
20 Ga0070669_100329709 3300005353 Bacteria 1234
21 Ga0070675_100000320 3300005354 Bacteria 32325
22 Ga0070675_100009605 3300005354 Bacteria 7528
23 Ga0070671_100013699 3300005355 Bacteria 6539
24 Ga0070674_100003928 3300005356 Bacteria 8420
25 Ga0070674_100015326 3300005356 Bacteria 4784
26 Ga0070688_100017574 3300005365 Unclassified 4107
27 Ga0070659_100008899 3300005366 Bacteria 7360
28 Ga0070701_10043225 3300005438 Unclassified 2304
29 Ga0070694_100093776 3300005444 Bacteria 2111
30 Ga0070694_100214053 3300005444 Bacteria 1443
31 Ga0070662_100073587 3300005457 Bacteria 2525
32 Ga0070662_100113346 3300005457 Bacteria 2069
33 Ga0070681_10006700 3300005458 Bacteria 11207
34 Ga0068867_100040887 3300005459 Bacteria 3386
35 Ga0068867_100058759 3300005459 Unclassified 2850
36 Ga0070698_100062407 3300005471 Unclassified 3760
37 Ga0070698_100246020 3300005471 Unclassified 1721
38 Ga0070698_100336973 3300005471 Bacteria 1440
39 Ga0070679_100004096 3300005530 Bacteria 13442
40 Ga0070684_100122764 3300005535 Bacteria 2337
41 Ga0068853_100055903 3300005539 Bacteria 3402
42 Ga0070672_100033369 3300005543 Bacteria 3898
43 Ga0070695_100008373 3300005545 Bacteria 6136
44 Ga0070693_100021397 3300005547 Bacteria 3426
45 Ga0070665_100208885 3300005548 Bacteria 1953
46 Ga0068855_100005774 3300005563 Bacteria 15104
47 Ga0068855_100093578 3300005563 Bacteria 3466
48 Ga0068854_100021077 3300005578 Bacteria 4418
49 Ga0068856_100047389 3300005614 Bacteria 4233
50 Ga0068856_100148799 3300005614 Unclassified 2350
51 Ga0070702_100003310 3300005615 Bacteria 7188
52 Ga0068852_100115147 3300005616 Bacteria 2451
53 Ga0068852_100235866 3300005616 Bacteria 1746
54 Ga0068859_100018627 3300005617 Bacteria 6979
55 Ga0068864_100005418 3300005618 Bacteria 10458
56 Ga0068864_100096977 3300005618 Unclassified 2610
57 Ga0068861_100064209 3300005719 Bacteria 2824
58 Ga0068861_100293250 3300005719 Unclassified 1405
59 Ga0068863_100016669 3300005841 Bacteria 7050
60 Ga0068860_100111502 3300005843 Bacteria 2616
61 Ga0068862_100233372 3300005844 Unclassified 1670
62 Ga0075365_10027397 3300006038 Bacteria 3626
63 Ga0075364_10094242 3300006051 Bacteria 1989
64 Ga0075367_10039031 3300006178 Bacteria 2767
65 Ga0075366_10015345 3300006195 Bacteria 4388
66 Ga0097621_100024128 3300006237 Bacteria 4745
67 Ga0075370_10010972 3300006353 Bacteria 4750
68 Ga0075428_100242870 3300006844 Unclassified 1943
69 Ga0075431_100089117 3300006847 Unclassified 3185
70 Ga0075433_10027592 3300006852 Bacteria 4817
71 Ga0075434_100003453 3300006871 Bacteria 14125
72 Ga0075429_100139312 3300006880 Unclassified 2124
73 Ga0068865_100066133 3300006881 Bacteria 2550
74 Ga0068865_100427299 3300006881 Unclassified 1090
75 Ga0075436_100007975 3300006914 Bacteria 7251
76 Ga0075436_100035178 3300006914 Unclassified 3456
77 Ga0097620_100018627 3300006931 Bacteria 6979
78 Ga0075435_100013705 3300007076 Bacteria 6040
79 Ga0075435_100027259 3300007076 Bacteria 4467
80 Ga0111539_10000499 3300009094 Bacteria 49976
81 Ga0111539_10005672 3300009094 Bacteria 16149
82 Ga0111539_10041943 3300009094 Bacteria 5498
83 Ga0111539_10058719 3300009094 Bacteria 4563
84 Ga0111539_10139880 3300009094 Unclassified 2834
85 Ga0111539_10312430 3300009094 Bacteria 1829
86 Ga0111539_10314523 3300009094 Bacteria 1822
87 Ga0105245_10022195 3300009098 Bacteria 5572
88 Ga0105245_10079061 3300009098 Unclassified 3002
89 Ga0105245_10401579 3300009098 Bacteria 1370
90 Ga0114129_10001222 3300009147 Bacteria 34134
91 Ga0114129_10004112 3300009147 Bacteria 20568
92 Ga0114129_10167427 3300009147 Bacteria 2998
93 Ga0114129_10504826 3300009147 Bacteria 1579
94 Ga0105243_10005559 3300009148 Bacteria 9818
95 Ga0105243_10016009 3300009148 Bacteria 5673
96 Ga0105243_10261422 3300009148 Bacteria 1550
97 Ga0105243_10412422 3300009148 Unclassified 1257
98 Ga0105242_10010632 3300009176 Bacteria 7066
99 Ga0105242_10110079 3300009176 Unclassified 2346
100 Ga0105242_10247049 3300009176 Bacteria 1606
101 Ga0105242_10460825 3300009176 Bacteria 1200
102 Ga0105248_10032105 3300009177 Bacteria 5868
103 Ga0105248_10036702 3300009177 Bacteria 5481
104 Ga0105248_10075526 3300009177 Bacteria 3788
105 Ga0105237_10036543 3300009545 Bacteria 4971
106 Ga0105238_10059258 3300009551 Unclassified 3835
107 Ga0105238_10075947 3300009551 Bacteria 3352
108 Ga0105238_10210830 3300009551 Bacteria 1919
109 Ga0105249_10108554 3300009553 Unclassified 2620
110 Ga0105239_10006153 3300010375 Bacteria 13964
111 Ga0105246_10021809 3300011119 Bacteria 4126
112 Ga0157374_10147681 3300013296 Bacteria 2284
113 Ga0157378_10202750 3300013297 Unclassified 1877
114 Ga0157378_10236635 3300013297 Bacteria 1743
115 Ga0163162_10112273 3300013306 Unclassified 2824
116 Ga0157372_10003544 3300013307 Bacteria 16820
117 Ga0157372_10006679 3300013307 Bacteria 12270
118 Ga0163163_10021375 3300014325 Bacteria 6106
119 Ga0157380_10046953 3300014326 Bacteria 3394
120 Ga0157380_10060938 3300014326 Bacteria 3017
121 Ga0157380_10204164 3300014326 Bacteria 1756
122 Ga0157377_10008245 3300014745 Bacteria 5073
123 Ga0157376_10088039 3300014969 Bacteria 2681
124 Ga0207697_10024319 3300025315 Bacteria 2480
125 Ga0207642_10029394 3300025899 Bacteria 2275
126 Ga0207680_10162546 3300025903 Bacteria 1499
127 Ga0207645_10012662 3300025907 Bacteria 5718
128 Ga0207645_10052837 3300025907 Bacteria 2597
129 Ga0207645_10060145 3300025907 Bacteria 2426
130 Ga0207643_10047197 3300025908 Bacteria 2436
131 Ga0207705_10066256 3300025909 Unclassified 2612
132 Ga0207707_10004084 3300025912 Bacteria 12931
133 Ga0207695_10124144 3300025913 Bacteria 2546
134 Ga0207660_10025148 3300025917 Bacteria 4039
135 Ga0207660_10026383 3300025917 Bacteria 3956
136 Ga0207662_10030133 3300025918 Unclassified 3147
137 Ga0207662_10095596 3300025918 Unclassified 1834
138 Ga0207657_10016557 3300025919 Bacteria 7106
139 Ga0207657_10020581 3300025919 Bacteria 6230
140 Ga0207649_10040544 3300025920 Unclassified 2830
141 Ga0207652_10006926 3300025921 Bacteria 9129
142 Ga0207652_10151507 3300025921 Bacteria 2076
143 Ga0207681_10065567 3300025923 Bacteria 2511
144 Ga0207694_10250408 3300025924 Unclassified 1449
145 Ga0207694_10262139 3300025924 Bacteria 1416
146 Ga0207650_10017352 3300025925 Bacteria 5040
147 Ga0207659_10000798 3300025926 Bacteria 18626
148 Ga0207659_10006234 3300025926 Bacteria 7295
149 Ga0207687_10012925 3300025927 Bacteria 5456
150 Ga0207687_10107411 3300025927 Unclassified 2065
151 Ga0207644_10107638 3300025931 Unclassified 2103
152 Ga0207644_10150265 3300025931 Bacteria 1802
153 Ga0207690_10184055 3300025932 Bacteria 1575
154 Ga0207706_10033159 3300025933 Bacteria 4597
155 Ga0207706_10105129 3300025933 Bacteria 2484
156 Ga0207686_10011497 3300025934 Bacteria 4849
157 Ga0207686_10012218 3300025934 Bacteria 4717
158 Ga0207686_10045637 3300025934 Bacteria 2697
159 Ga0207709_10161082 3300025935 Bacteria 1565
160 Ga0207670_10149390 3300025936 Unclassified 1732
161 Ga0207670_10278988 3300025936 Bacteria 1302
162 Ga0207669_10024156 3300025937 Bacteria 3262
163 Ga0207669_10100316 3300025937 Unclassified 1912
164 Ga0207669_10281791 3300025937 Bacteria 1254
165 Ga0207704_10218484 3300025938 Unclassified 1408
166 Ga0207691_10013976 3300025940 Bacteria 7659
167 Ga0207691_10043635 3300025940 Bacteria 4131
168 Ga0207711_10024400 3300025941 Bacteria 5065
169 Ga0207711_10044373 3300025941 Unclassified 3795
170 Ga0207689_10006155 3300025942 Bacteria 10620
171 Ga0207689_10459908 3300025942 Unclassified 1064
172 Ga0207661_10013842 3300025944 Bacteria 5895
173 Ga0207679_10013291 3300025945 Bacteria 5396
174 Ga0207667_10133897 3300025949 Bacteria 2552
175 Ga0207651_10005006 3300025960 Bacteria 6756
176 Ga0207712_10358152 3300025961 Unclassified 1215
177 Ga0207668_10144799 3300025972 Bacteria 1832
178 Ga0207640_10007697 3300025981 Bacteria 5955
179 Ga0207658_10221580 3300025986 Unclassified 1592
180 Ga0207677_10112569 3300026023 Unclassified 2030
181 Ga0207703_10109532 3300026035 Unclassified 2354
182 Ga0207639_10272475 3300026041 Bacteria 1485
183 Ga0207678_10152080 3300026067 Bacteria 1976
184 Ga0207708_10002822 3300026075 Bacteria 12768
185 Ga0207708_10046024 3300026075 Bacteria 3324
186 Ga0207708_10236569 3300026075 Bacteria 1468
187 Ga0207702_10049050 3300026078 Bacteria 3562
188 Ga0207641_10000800 3300026088 Bacteria 33612
189 Ga0207641_10027166 3300026088 Bacteria 4726
190 Ga0207648_10001812 3300026089 Bacteria 23431
191 Ga0207648_10010367 3300026089 Bacteria 8838
192 Ga0207648_10019061 3300026089 Bacteria 6195
193 Ga0207676_10035079 3300026095 Bacteria 3803
194 Ga0207674_10016760 3300026116 Bacteria 8008
195 Ga0207675_100001911 3300026118 Bacteria 20781
196 Ga0207675_100029323 3300026118 Bacteria 5128
197 Ga0207675_100149660 3300026118 Bacteria 2221
198 Ga0207683_10185054 3300026121 Unclassified 1890
199 Ga0207698_10053523 3300026142 Bacteria 3099
200 Ga0207698_10205616 3300026142 Bacteria 1767
201 Ga0207428_10005300 3300027907 Bacteria 12038
202 Ga0207428_10040725 3300027907 Unclassified 3765
203 Ga0268265_10034366 3300028380 Bacteria 3694
204 Ga0268265_10209390 3300028380 Unclassified 1698
205 Ga0268264_10191843 3300028381 Bacteria 1863
206 Ga0307408_100100564 3300031548 Unclassified 2202
207 Ga0307406_10241051 3300031901 Unclassified 1356
208 Ga0307407_10050458 3300031903 Unclassified 2381
209 Ga0307416_100022267 3300032002 Bacteria 4570
210 Ga0307416_100476058 3300032002 Bacteria 1308
211 Ga0307414_10044376 3300032004 Bacteria 3036
212 Ga0307411_10035163 3300032005 Bacteria 3125
213 Ga0373934_0009075 3300035086 Bacteria 3720
214 Ga0373957_0006324 3300035120 Bacteria 3724
215 Ga0373927_0002420 3300035695 Bacteria 13605
216 Ga0373937_0000632 3300036401 Bacteria 30801
217 Ga0451853_3197293 3300041512 Bacteria 2476
218 Ga0439441_026331 3300042001 Bacteria 1103
219 Ga0495638_0008875 3300046460 Bacteria 7094
220 Ga0495651_0015038 3300046462 Bacteria 5982
221 Ga0495580_0041892 3300046472 Bacteria 3263
222 Ga0495582_0003298 3300046473 Bacteria 9069
223 Ga0495594_0106079 3300046499 Bacteria 1582
224 Ga0495628_0103346 3300046516 Bacteria 2197
225 Ga0495652_0061038 3300046529 Bacteria 3184
226 Ga0495586_0016975 3300046535 Bacteria 3872
227 Ga0495586_0064342 3300046535 Bacteria 1998
228 Ga0495587_0030667 3300046536 Bacteria 3260
229 Ga0495621_0050322 3300046539 Bacteria 1489
230 Ga0495645_0000814 3300046543 Bacteria 21311
231 Ga0495667_0051012 3300046559 Unclassified 2730
232 Ga0495625_0008631 3300046660 Bacteria 8668
233 Ga0495588_0022416 3300046674 Unclassified 3122
234 Ga0495623_0057948 3300046679 Bacteria 2436
235 Ga0495600_0004449 3300046809 Bacteria 8387
236 Ga0495684_0058696 3300047471 Bacteria 2930
237 Ga0496104_0063159 3300048907 Bacteria 3512
238 Ga0501032_0174866 3300049569 Bacteria 1407
239 Ga0501042_0335147 3300049578 Bacteria 1093
240 Ga0501071_0068368 3300049587 Bacteria 2585
241 Ga0501071_0116746 3300049587 Bacteria 1976
242 Ga0501072_0097717 3300049588 Bacteria 2334
243 Ga0501073_0015414 3300049589 Bacteria 5545
244 Ga0501074_0332908 3300049590 Bacteria 1078
245 Ga0501076_0174524 3300049592 Bacteria 1752
246 Ga0501076_0303264 3300049592 Bacteria 1309
247 Ga0501045_0011232 3300049824 Bacteria 6283
248 Ga0501045_0057679 3300049824 Bacteria 2842
249 nmdc:mga03683_6079_c1 3300050489 Bacteria 4117
250 nmdc:mga00v17_4218_c1 3300050491 Bacteria 7459
251 nmdc:mga00v17_46163_c1 3300050491 Bacteria 2635
252 nmdc:mga0yw44_12303_c1 3300050492 Bacteria 4454
253 nmdc:mga0k408_16151_c1 3300050493 Bacteria 4138
254 nmdc:mga06z11_10593_c1 3300050494 Bacteria 3937
255 nmdc:mga07m45_47741_c1 3300050496 Bacteria 2407
256 nmdc:mga05p37_21032_c1 3300050507 Bacteria 7896
257 nmdc:mga05p37_432727_c1 3300050507 Bacteria 1528
258 nmdc:mga05p37_507860_c1 3300050507 Bacteria 1382
259 nmdc:mga05p37_5_c1 3300050507 Bacteria 158201
260 nmdc:mga09592_15705_c1 3300050508 Bacteria 6186
261 nmdc:mga09592_176763_c1 3300050508 Unclassified 1846
262 nmdc:mga09592_583909_c1 3300050508 Bacteria 958
263 nmdc:mga0qj67_60119_c1 3300050509 Bacteria 3014
264 nmdc:mga06r32_579464_c1 3300050510 Bacteria 1094
265 nmdc:mga06r32_59578_c1 3300050510 Unclassified 3672
266 nmdc:mga08y16_121058_c1 3300050511 Bacteria 2723
267 nmdc:mga08y16_268313_c1 3300050511 Unclassified 1762
268 nmdc:mga08y16_3919_c1 3300050511 Bacteria 15492
269 nmdc:mga08y16_49059_c1 3300050511 Bacteria 4418
270 nmdc:mga08y16_820_c1 3300050511 Bacteria 29804
271 nmdc:mga0n895_11195_c1 3300050512 Bacteria 7988
272 nmdc:mga0n895_420667_c1 3300050512 Unclassified 1350
273 nmdc:mga0rr50_69917_c1 3300050513 Bacteria 2674
274 nmdc:mga08x19_11865_c1 3300050514 Bacteria 5239
275 nmdc:mga0a205_122770_c1 3300050515 Unclassified 2497
276 nmdc:mga0a205_27304_c1 3300050515 Bacteria 5451
277 Ga0500568_0023570 3300053139 Unclassified 2617
278 Ga0501084_0200410 3300054114 Unclassified 1684
279 Ga0501082_0060743 3300060353 Bacteria 3254
280 Ga0530510_0086547 3300061734 Bacteria 2283
281 Ga0495672_0010025
282 Ga0070683_100037750
283 Ga0070690_100073913
284 Ga0070670_100036378
285 Ga0070677_10062746
286 Ga0068869_100006341
287 Ga0070680_100005989
288 Ga0070680_100020364
289 Ga0070680_100083023
290 Ga0070680_100318954
291 Ga0070682_100016948
292 Ga0068868_100034192
293 Ga0070660_100022081
294 Ga0070660_100039263
295 Ga0070689_100016751
296 Ga0070661_100009004
297 Ga0070692_10087281
298 Ga0070692_10111418
299 Ga0070668_100354273
300 Ga0070669_100329709
301 Ga0070675_100000320
302 Ga0070675_100009605
303 Ga0070671_100013699
304 Ga0070674_100003928
305 Ga0070674_100015326
306 Ga0070688_100017574
307 Ga0070659_100008899
308 Ga0070701_10043225
309 Ga0070694_100093776
310 Ga0070694_100214053
311 Ga0070662_100073587
312 Ga0070662_100113346
313 Ga0070681_10006700
314 Ga0068867_100040887
315 Ga0068867_100058759
316 Ga0070698_100062407
317 Ga0070698_100246020
318 Ga0070698_100336973
319 Ga0070679_100004096
320 Ga0070684_100122764
321 Ga0068853_100055903
322 Ga0070672_100033369
323 Ga0070695_100008373
324 Ga0070693_100021397
325 Ga0070665_100208885
326 Ga0068855_100005774
327 Ga0068855_100093578
328 Ga0068854_100021077
329 Ga0068856_100047389
330 Ga0068856_100148799
331 Ga0070702_100003310
332 Ga0068852_100115147
333 Ga0068852_100235866
334 Ga0068859_100018627
335 Ga0068864_100005418
336 Ga0068864_100096977
337 Ga0068861_100064209
338 Ga0068861_100293250
339 Ga0068863_100016669
340 Ga0068860_100111502
341 Ga0068862_100233372
342 Ga0075365_10027397
343 Ga0075364_10094242
344 Ga0075367_10039031
345 Ga0075366_10015345
346 Ga0097621_100024128
347 Ga0075370_10010972
348 Ga0075428_100242870
349 Ga0075431_100089117
350 Ga0075433_10027592
351 Ga0075434_100003453
352 Ga0075429_100139312
353 Ga0068865_100066133
354 Ga0068865_100427299
355 Ga0075436_100007975
356 Ga0075436_100035178
357 Ga0097620_100018627
358 Ga0075435_100013705
359 Ga0075435_100027259
360 Ga0111539_10000499
361 Ga0111539_10005672
362 Ga0111539_10041943
363 Ga0111539_10058719
364 Ga0111539_10139880
365 Ga0111539_10312430
366 Ga0111539_10314523
367 Ga0105245_10022195
368 Ga0105245_10079061
369 Ga0105245_10401579
370 Ga0114129_10001222
371 Ga0114129_10004112
372 Ga0114129_10167427
373 Ga0114129_10504826
374 Ga0105243_10005559
375 Ga0105243_10016009
376 Ga0105243_10261422
377 Ga0105243_10412422
378 Ga0105242_10010632
379 Ga0105242_10110079
380 Ga0105242_10247049
381 Ga0105242_10460825
382 Ga0105248_10032105
383 Ga0105248_10036702
384 Ga0105248_10075526
385 Ga0105237_10036543
386 Ga0105238_10059258
387 Ga0105238_10075947
388 Ga0105238_10210830
389 Ga0105249_10108554
390 Ga0105239_10006153
391 Ga0105246_10021809
392 Ga0157374_10147681
393 Ga0157378_10202750
394 Ga0157378_10236635
395 Ga0163162_10112273
396 Ga0157372_10003544
397 Ga0157372_10006679
398 Ga0163163_10021375
399 Ga0157380_10046953
400 Ga0157380_10060938
401 Ga0157380_10204164
402 Ga0157377_10008245
403 Ga0157376_10088039
404 Ga0207697_10024319
405 Ga0207642_10029394
406 Ga0207680_10162546
407 Ga0207645_10012662
408 Ga0207645_10052837
409 Ga0207645_10060145
410 Ga0207643_10047197
411 Ga0207705_10066256
412 Ga0207707_10004084
413 Ga0207695_10124144
414 Ga0207660_10025148
415 Ga0207660_10026383
416 Ga0207662_10030133
417 Ga0207662_10095596
418 Ga0207657_10016557
419 Ga0207657_10020581
420 Ga0207649_10040544
421 Ga0207652_10006926
422 Ga0207652_10151507
423 Ga0207681_10065567
424 Ga0207694_10250408
425 Ga0207694_10262139
426 Ga0207650_10017352
427 Ga0207659_10000798
428 Ga0207659_10006234
429 Ga0207687_10012925
430 Ga0207687_10107411
431 Ga0207644_10107638
432 Ga0207644_10150265
433 Ga0207690_10184055
434 Ga0207706_10033159
435 Ga0207706_10105129
436 Ga0207686_10011497
437 Ga0207686_10012218
438 Ga0207686_10045637
439 Ga0207709_10161082
440 Ga0207670_10149390
441 Ga0207670_10278988
442 Ga0207669_10024156
443 Ga0207669_10100316
444 Ga0207669_10281791
445 Ga0207704_10218484
446 Ga0207691_10013976
447 Ga0207691_10043635
448 Ga0207711_10024400
449 Ga0207711_10044373
450 Ga0207689_10006155
451 Ga0207689_10459908
452 Ga0207661_10013842
453 Ga0207679_10013291
454 Ga0207667_10133897
455 Ga0207651_10005006
456 Ga0207712_10358152
457 Ga0207668_10144799
458 Ga0207640_10007697
459 Ga0207658_10221580
460 Ga0207677_10112569
461 Ga0207703_10109532
462 Ga0207639_10272475
463 Ga0207678_10152080
464 Ga0207708_10002822
465 Ga0207708_10046024
466 Ga0207708_10236569
467 Ga0207702_10049050
468 Ga0207641_10000800
469 Ga0207641_10027166
470 Ga0207648_10001812
471 Ga0207648_10010367
472 Ga0207648_10019061
473 Ga0207676_10035079
474 Ga0207674_10016760
475 Ga0207675_100001911
476 Ga0207675_100029323
477 Ga0207675_100149660
478 Ga0207683_10185054
479 Ga0207698_10053523
480 Ga0207698_10205616
481 Ga0207428_10005300
482 Ga0207428_10040725
483 Ga0268265_10034366
484 Ga0268265_10209390
485 Ga0268264_10191843
486 Ga0307408_100100564
487 Ga0307406_10241051
488 Ga0307407_10050458
489 Ga0307416_100022267
490 Ga0307416_100476058
491 Ga0307414_10044376
492 Ga0307411_10035163
493 Ga0373934_0009075
494 Ga0373957_0006324
495 Ga0373927_0002420
496 Ga0373937_0000632
497 Ga0451853_3197293
498 Ga0439441_026331
499 Ga0495638_0008875
500 Ga0495651_0015038
501 Ga0495580_0041892
502 Ga0495582_0003298
503 Ga0495594_0106079
504 Ga0495628_0103346
505 Ga0495652_0061038
506 Ga0495586_0016975
507 Ga0495586_0064342
508 Ga0495587_0030667
509 Ga0495621_0050322
510 Ga0495645_0000814
511 Ga0495667_0051012
512 Ga0495625_0008631
513 Ga0495588_0022416
514 Ga0495623_0057948
515 Ga0495600_0004449
516 Ga0495684_0058696
517 Ga0496104_0063159
518 Ga0501032_0174866
519 Ga0501042_0335147
520 Ga0501071_0068368
521 Ga0501071_0116746
522 Ga0501072_0097717
523 Ga0501073_0015414
524 Ga0501074_0332908
525 Ga0501076_0174524
526 Ga0501076_0303264
527 Ga0501045_0011232
528 Ga0501045_0057679
529 nmdc:mga03683_6079_c1
530 nmdc:mga00v17_4218_c1
531 nmdc:mga00v17_46163_c1
532 nmdc:mga0yw44_12303_c1
533 nmdc:mga0k408_16151_c1
534 nmdc:mga06z11_10593_c1
535 nmdc:mga07m45_47741_c1
536 nmdc:mga05p37_21032_c1
537 nmdc:mga05p37_432727_c1
538 nmdc:mga05p37_507860_c1
539 nmdc:mga05p37_5_c1
540 nmdc:mga09592_15705_c1
541 nmdc:mga09592_176763_c1
542 nmdc:mga09592_583909_c1
543 nmdc:mga0qj67_60119_c1
544 nmdc:mga06r32_579464_c1
545 nmdc:mga06r32_59578_c1
546 nmdc:mga08y16_121058_c1
547 nmdc:mga08y16_268313_c1
548 nmdc:mga08y16_3919_c1
549 nmdc:mga08y16_49059_c1
550 nmdc:mga08y16_820_c1
551 nmdc:mga0n895_11195_c1
552 nmdc:mga0n895_420667_c1
553 nmdc:mga0rr50_69917_c1
554 nmdc:mga08x19_11865_c1
555 nmdc:mga0a205_122770_c1
556 nmdc:mga0a205_27304_c1
557 Ga0500568_0023570
558 Ga0501084_0200410
559 Ga0501082_0060743
560 Ga0530510_0086547

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03328

HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase family

166

358

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7v8t-assembly1.cif.gz_F crystal structure of class ii pyruvate aldolase from pseudomonas aeruginosa. 0.8434 28 296
2vws-assembly1.cif.gz_A crystal structure of yfau, a metal ion dependent class ii aldolase from escherichia coli k12 0.8385 29 296
4b5w-assembly1.cif.gz_C crystal structures of divalent metal dependent pyruvate aldolase r70a mutant, hpai, in complex with pyruvate 0.8259 29 296
1dxe-assembly1.cif.gz_A 2-dehydro-3-deoxy-galactarate aldolase from escherichia coli 0.8044 29 314
7o5i-assembly1.cif.gz_A crystal structure of apo-swhka (hydroxy ketone aldolase) from sphingomonas wittichii rw1 0.8004 26 313
ID Description Score Start End Superfamily
1dxfA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8503 29 296 3.20.20.60
af_Q4CQY1_6_194_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8392 30 235 3.20.20.60
4mf4F00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8183 29 296 3.20.20.60
af_P76469_1_267_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.8029 29 294 3.20.20.60
6r62A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.7974 29 313 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A7V8XYC0-F1-model_v4 HpcH/HpaI aldolase/citrate lyase domain-containing protein 0.9815 76 314 GO:0005737
GO:0016832
AF-A0A7V8XYC0-F1-model_v4 HpcH/HpaI aldolase/citrate lyase domain-containing protein 0.9774 76 314 GO:0005737
GO:0016832
AF-A0A2V7ZM33-F1-model_v4 Uncharacterized protein 0.9562 143 314 GO:0003824
AF-A0A3D2UFU7-F1-model_v4 HpcH/HpaI aldolase/citrate lyase domain-containing protein 0.9435 32 314 GO:0005737
GO:0016832
AF-A0A2V7ZM33-F1-model_v4 Uncharacterized protein 0.9351 143 314 GO:0003824

Map