F383870

General Info

Members Datasets Scaffolds Average Seq Length
280 179 238 309

Family's Representative Sequence

Representative Sequence 3300046507|Ga0495606_0022486|Ga0495606_0022486_2526_3614
Length 343
Sequence VSCVSIERLTVTTLPKRLTLWYRGILSLFTSNAQSSMPSPVSLPQAFAIFAGYACRKLNRLGPGAASELNRFVVFLALPALLFDIMAKTPWSMLDQPAFIAAFGIGAAVIFLLTLVVRLMQSRHLADASIDGLNAAYPNTGFVGLPLCLLAFGKESLAPAVIATIITVCVMFAVAIVLIELGLQTEKHIGATLGHVAKSLVKNPLLIAPVAGALLSGSGAHMPEGAEALLKLLGGAASPCALVALGLFLGAKGEARAVGTTSALVTMKLVAQPLLTWWLAFHVFSLPPLWAKSAVILSALPTGTGPFMLAEFYRREGGVTSSAILFSTVVSLITVTLCLTLML

Samples

Sample ID Description Type Environment
1 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
2 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
3 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
4 2528768022 Bradyrhizobium japonicum USDA 123 Isolate Nodule
5 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
6 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
7 2643221569 Achromobacter sp. Root565 Isolate Unclassified
8 2643221594 Achromobacter sp. Root170 Isolate Unclassified
9 2643221621 Achromobacter sp. Root83 Isolate Unclassified
10 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
11 2751185800 Brucella pituitosa AA2 Isolate Unclassified
12 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
13 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
14 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
15 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
16 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
17 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
18 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
19 2854911287 Brucella lupini LUP21 Isolate Unclassified
20 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
21 2858950400 Achromobacter sp. K91 Isolate Unclassified
22 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
23 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
24 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
25 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
26 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
27 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
28 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
29 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
30 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
31 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
32 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
33 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
34 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
35 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
36 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
37 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
38 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
39 2941479691
40 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
41 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
42 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
43 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
44 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
45 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
46 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
55 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
56 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
87 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
88 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
95 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
96 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
97 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
98 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
106 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
107 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
132 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
133 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
134 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
135 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
136 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
156 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
171 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
172 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
173 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
177 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
178 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
179 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.64
Metatranscriptomes 0.36
Isolates 15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.86
Nodule 6.07
Rhizoplane 7.14
Rhizosphere 47.5
Stem 0
Stem Tuber 0
Unclassified 31.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10036705 3300001989 Bacteria 1654
2 JGI24735J21928_10008562 3300002067 Bacteria 3303
3 Ga0006562J51391_1007200 3300003578 Bacteria 3890
4 Ga0065165_1002731 3300005262 Bacteria 14095
5 Ga0070658_10085379 3300005327 Bacteria 2596
6 Ga0070663_100054345 3300005455 Bacteria 2862
7 Ga0070697_100222690 3300005536 Bacteria 1608
8 Ga0070665_100299419 3300005548 Bacteria 1611
9 Ga0075364_10000526 3300006051 Bacteria 19481
10 Ga0075364_10137508 3300006051 Bacteria 1642
11 Ga0075367_10160729 3300006178 Bacteria 1397
12 Ga0075428_100136552 3300006844 Bacteria 2666
13 Ga0075430_100182272 3300006846 Bacteria 1746
14 Ga0075431_100043093 3300006847 Bacteria 4657
15 Ga0075429_100015045 3300006880 Bacteria 6707
16 Ga0075429_100397517 3300006880 Unclassified 1207
17 Ga0105251_10001088 3300009011 Bacteria 23672
18 Ga0105251_10039286 3300009011 Bacteria 2313
19 Ga0105244_10084692 3300009036 Bacteria 1565
20 Ga0105250_10071296 3300009092 Bacteria 1403
21 Ga0105240_10139383 3300009093 Bacteria 2901
22 Ga0111539_10035538 3300009094 Bacteria 6031
23 Ga0114129_10047817 3300009147 Bacteria 6011
24 Ga0105248_10075928 3300009177 Bacteria 3777
25 Ga0105237_10437982 3300009545 Bacteria 1313
26 Ga0105238_10038986 3300009551 Bacteria 4821
27 Ga0105238_10147777 3300009551 Bacteria 2326
28 Ga0157369_10102255 3300013105 Bacteria 3054
29 Ga0163162_10003009 3300013306 Bacteria 16112
30 Ga0163162_10014385 3300013306 Bacteria 7732
31 Ga0163162_10524882 3300013306 Bacteria 1313
32 Ga0157375_10377810 3300013308 Bacteria 1583
33 Ga0163161_10182594 3300017792 Bacteria 1609
34 Ga0213872_10030709 3300021361 Bacteria 2462
35 Ga0213876_10022618 3300021384 Bacteria 3322
36 Ga0209676_1005177 3300025292 Bacteria 6930
37 Ga0209758_1015440 3300025297 Bacteria 3953
38 Ga0209758_1044020 3300025297 Bacteria 1637
39 Ga0209758_1074941 3300025297 Bacteria 1048
40 Ga0209050_1000217 3300025298 Bacteria 128833
41 Ga0207426_1001829 3300025302 Bacteria 15733
42 Ga0207426_1002298 3300025302 Bacteria 12600
43 Ga0207647_10019410 3300025904 Bacteria 4573
44 Ga0207694_10014065 3300025924 Bacteria 6034
45 Ga0207694_10123135 3300025924 Bacteria 2072
46 Ga0207711_10040381 3300025941 Bacteria 3970
47 Ga0207678_10126523 3300026067 Bacteria 2180
48 Ga0207428_10048354 3300027907 Bacteria 3413
49 Ga0265338_10002526 3300028800 Bacteria 27189
50 Ga0307412_10024899 3300031911 Bacteria 3700
51 Ga0373925_0170966 3300037068 Bacteria 1716
52 Ga0395900_0140202 3300037418 Bacteria 2476
53 Ga0395898_0463961 3300037466 Bacteria 1206
54 Ga0436361_0526161 3300039447 Unclassified 1613
55 Ga0436361_0807815 3300039447 Bacteria 8908
56 Ga0466968_0003744 3300044735 Bacteria 5638
57 Ga0466970_0103278 3300044765 Bacteria 1553
58 Ga0495627_000099 3300046453 Bacteria 107062
59 Ga0495603_0138696 3300046455 Bacteria 1415
60 Ga0495591_005854 3300046458 Bacteria 5581
61 Ga0495629_0000160 3300046459 Bacteria 59328
62 Ga0495629_0016213 3300046459 Bacteria 5349
63 Ga0495638_0001356 3300046460 Bacteria 22455
64 Ga0495653_0007456 3300046463 Bacteria 8951
65 Ga0495650_0000842 3300046471 Bacteria 36937
66 Ga0495650_0001257 3300046471 Bacteria 26171
67 Ga0495580_0098584 3300046472 Bacteria 2033
68 Ga0495582_0009013 3300046473 Bacteria 5507
69 Ga0495605_0009516 3300046474 Bacteria 5457
70 Ga0495664_0021814 3300046477 Bacteria 3701
71 Ga0495664_0150142 3300046477 Bacteria 1413
72 Ga0495664_0150713 3300046477 Bacteria 1410
73 Ga0495596_0000160 3300046500 Bacteria 46925
74 Ga0495607_0007487 3300046501 Bacteria 7547
75 Ga0495606_0001631 3300046507 Bacteria 29232
76 Ga0495606_0022486 3300046507 Bacteria 4593
77 Ga0495606_0049530 3300046507 Bacteria 2754
78 Ga0495606_0069114 3300046507 Bacteria 2232
79 Ga0495606_0101005 3300046507 Bacteria 1756
80 Ga0495610_0000018 3300046512 Bacteria 355044
81 Ga0495610_0000879 3300046512 Bacteria 27953
82 Ga0495610_0008902 3300046512 Bacteria 6428
83 Ga0495616_0155852 3300046513 Bacteria 1030
84 Ga0495620_0050806 3300046515 Bacteria 1767
85 Ga0495628_0013332 3300046516 Bacteria 6916
86 Ga0495628_0025226 3300046516 Bacteria 4857
87 Ga0495632_0004146 3300046519 Bacteria 9953
88 Ga0495643_0000132 3300046522 Bacteria 121567
89 Ga0495643_0002081 3300046522 Bacteria 16557
90 Ga0495643_0027823 3300046522 Bacteria 3173
91 Ga0495648_0180698 3300046524 Bacteria 1073
92 Ga0495642_0003929 3300046528 Bacteria 5817
93 Ga0495652_0064462 3300046529 Bacteria 3081
94 Ga0495654_0011505 3300046530 Bacteria 4785
95 Ga0495665_0004103 3300046531 Bacteria 7849
96 Ga0495665_0155435 3300046531 Bacteria 1193
97 Ga0495586_0025090 3300046535 Bacteria 3189
98 Ga0495597_0008661 3300046542 Bacteria 5086
99 Ga0495645_0001056 3300046543 Bacteria 18766
100 Ga0495645_0047404 3300046543 Bacteria 3130
101 Ga0495633_0052178 3300046558 Bacteria 1927
102 Ga0495667_0014838 3300046559 Bacteria 5265
103 Ga0495625_0003524 3300046660 Bacteria 15499
104 Ga0495635_0009868 3300046663 Bacteria 6672
105 Ga0495588_0142723 3300046674 Bacteria 1265
106 Ga0495599_0140695 3300046678 Bacteria 1497
107 Ga0495623_0003037 3300046679 Bacteria 11051
108 Ga0495646_0002443 3300046680 Bacteria 11406
109 Ga0495646_0058686 3300046680 Bacteria 2300
110 Ga0495669_0015383 3300046684 Bacteria 3276
111 Ga0495669_0024892 3300046684 Bacteria 2608
112 Ga0495613_0006582 3300046689 Bacteria 8685
113 Ga0495624_0000802 3300046690 Bacteria 24818
114 Ga0495671_0050985 3300046692 Bacteria 2060
115 Ga0495649_0005294 3300046694 Bacteria 8240
116 Ga0495674_0027233 3300047319 Bacteria 5224
117 Ga0495674_0031614 3300047319 Bacteria 4808
118 Ga0495683_0008194 3300047323 Bacteria 5605
119 Ga0495687_000021 3300047443 Bacteria 334681
120 Ga0495687_009483 3300047443 Bacteria 5435
121 Ga0495687_014713 3300047443 Bacteria 4012
122 Ga0495675_0131929 3300047444 Bacteria 1552
123 Ga0495675_0215648 3300047444 Bacteria 1163
124 Ga0495681_0000020 3300047470 Bacteria 170007
125 Ga0495686_0000081 3300047472 Bacteria 201295
126 Ga0495686_0000433 3300047472 Bacteria 64805
127 Ga0495686_0002821 3300047472 Bacteria 15732
128 Ga0495593_0005267 3300047673 Bacteria 7641
129 Ga0495602_0002616 3300048088 Bacteria 18389
130 Ga0495615_0000148 3300048090 Bacteria 17594
131 Ga0495626_0013390 3300048091 Bacteria 4262
132 Ga0496100_0000440 3300048903 Bacteria 20110
133 Ga0496101_0000570 3300048904 Bacteria 22590
134 Ga0496101_0024491 3300048904 Bacteria 4178
135 Ga0496102_0005349 3300048905 Bacteria 10897
136 Ga0496102_0285915 3300048905 Bacteria 1554
137 Ga0496103_0028979 3300048906 Bacteria 3362
138 Ga0496104_0048109 3300048907 Bacteria 4021
139 Ga0496105_0053323 3300048908 Bacteria 3340
140 Ga0496105_0151420 3300048908 Bacteria 1906
141 Ga0496105_0168639 3300048908 Bacteria 1795
142 Ga0496106_0011296 3300048909 Bacteria 6609
143 Ga0496106_0038964 3300048909 Bacteria 3559
144 Ga0496106_0355235 3300048909 Bacteria 1177
145 Ga0496107_0023713 3300048910 Bacteria 4337
146 Ga0496111_0012135 3300048914 Bacteria 5827
147 Ga0496113_0018998 3300048916 Bacteria 4799
148 Ga0496114_0019912 3300048917 Bacteria 5442
149 Ga0496114_0456627 3300048917 Bacteria 1131
150 Ga0496115_0014084 3300048918 Bacteria 6054
151 Ga0496116_0000039 3300048919 Bacteria 349134
152 Ga0496116_0010488 3300048919 Bacteria 7756
153 Ga0496116_0030690 3300048919 Bacteria 3857
154 Ga0496116_0053456 3300048919 Bacteria 2667
155 Ga0496116_0071856 3300048919 Bacteria 2189
156 Ga0496117_0005934 3300048920 Bacteria 12597
157 Ga0496117_0040419 3300048920 Bacteria 3430
158 Ga0496117_0040777 3300048920 Bacteria 3410
159 Ga0496117_0066876 3300048920 Bacteria 2435
160 Ga0496117_0147028 3300048920 Bacteria 1401
161 Ga0496118_0007957 3300048921 Bacteria 11088
162 Ga0496118_0020787 3300048921 Bacteria 5809
163 Ga0496118_0044909 3300048921 Bacteria 3455
164 Ga0496118_0048169 3300048921 Bacteria 3296
165 Ga0496119_0003713 3300048922 Bacteria 15637
166 Ga0496119_0174726 3300048922 Bacteria 1131
167 Ga0496119_0194271 3300048922 Bacteria 1055
168 Ga0496120_0004720 3300048923 Bacteria 11221
169 Ga0496121_0000127 3300048924 Bacteria 168545
170 Ga0496121_0000221 3300048924 Bacteria 123829
171 Ga0496121_0003279 3300048924 Bacteria 23226
172 Ga0496121_0006392 3300048924 Bacteria 14653
173 Ga0496121_0006929 3300048924 Bacteria 13815
174 Ga0496121_0016277 3300048924 Bacteria 7691
175 Ga0496121_0027026 3300048924 Bacteria 5383
176 Ga0496121_0048659 3300048924 Bacteria 3605
177 Ga0496121_0297722 3300048924 Bacteria 1096
178 Ga0496122_0000601 3300048925 Bacteria 74140
179 Ga0496122_0001187 3300048925 Bacteria 44594
180 Ga0496122_0002484 3300048925 Bacteria 26064
181 Ga0496122_0010091 3300048925 Bacteria 9803
182 Ga0496122_0025993 3300048925 Bacteria 5066
183 Ga0496122_0142358 3300048925 Bacteria 1497
184 Ga0496122_0154138 3300048925 Bacteria 1412
185 Ga0496123_0000411 3300048926 Bacteria 78453
186 Ga0496123_0000773 3300048926 Bacteria 51808
187 Ga0496123_0002266 3300048926 Bacteria 24245
188 Ga0496123_0003115 3300048926 Bacteria 19022
189 Ga0496123_0014471 3300048926 Bacteria 6536
190 Ga0496123_0016532 3300048926 Bacteria 5984
191 Ga0496123_0034521 3300048926 Bacteria 3621
192 Ga0496123_0158697 3300048926 Bacteria 1209
193 Ga0496124_0000650 3300048927 Bacteria 57324
194 Ga0496124_0031996 3300048927 Bacteria 4653
195 Ga0496124_0032982 3300048927 Bacteria 4564
196 Ga0496124_0056486 3300048927 Bacteria 3310
197 Ga0496124_0058482 3300048927 Bacteria 3241
198 Ga0496124_0169254 3300048927 Bacteria 1694
199 Ga0496124_0205621 3300048927 Bacteria 1493
200 Ga0496125_0000011 3300048928 Bacteria 655895
201 Ga0496125_0001990 3300048928 Bacteria 27719
202 Ga0496125_0017362 3300048928 Bacteria 6865
203 Ga0496125_0026093 3300048928 Bacteria 5335
204 Ga0496125_0037618 3300048928 Bacteria 4204
205 Ga0496125_0071133 3300048928 Bacteria 2719
206 Ga0496126_0000032 3300048929 Bacteria 372456
207 Ga0496126_0000041 3300048929 Bacteria 340389
208 Ga0496126_0009179 3300048929 Bacteria 10549
209 Ga0496126_0012568 3300048929 Bacteria 8665
210 Ga0496126_0016211 3300048929 Bacteria 7463
211 Ga0496126_0017976 3300048929 Bacteria 7029
212 Ga0496126_0069117 3300048929 Bacteria 3151
213 Ga0496126_0093854 3300048929 Bacteria 2634
214 Ga0496126_0118150 3300048929 Bacteria 2302
215 Ga0496126_0272923 3300048929 Bacteria 1403
216 Ga0496126_0370917 3300048929 Bacteria 1167
217 Ga0501046_0167965 3300049580 Bacteria 1648
218 Ga0501047_0120474 3300049581 Bacteria 2506
219 Ga0501048_0002822 3300049582 Bacteria 13261
220 Ga0501070_0432380 3300049586 Bacteria 1062
221 Ga0501080_0017475 3300049742 Bacteria 6633
222 nmdc:mga00v17_35_c1 3300050491 Bacteria 85646
223 nmdc:mga00v17_65786_c1 3300050491 Bacteria 2237
224 nmdc:mga05p37_5837_c1 3300050507 Bacteria 14478
225 nmdc:mga09592_492334_c1 3300050508 Bacteria 1056
226 nmdc:mga09592_50990_c1 3300050508 Bacteria 3491
227 nmdc:mga06r32_48980_c1 3300050510 Unclassified 4041
228 nmdc:mga06r32_66336_c1 3300050510 Bacteria 3483
229 nmdc:mga08y16_9287_c1 3300050511 Bacteria 10314
230 Ga0500643_000233 3300053087 Bacteria 51480
231 Ga0500643_009477 3300053087 Bacteria 3718
232 Ga0500641_0000502 3300053096 Bacteria 14083
233 Ga0500562_040109 3300053108 Bacteria 1244
234 Ga0500618_003109 3300053125 Bacteria 5856
235 Ga0500568_0012923 3300053139 Bacteria 3822
236 Ga0500616_0048076 3300053153 Bacteria 2263
237 Ga0500616_0081589 3300053153 Bacteria 1624
238 Ga0500645_001657 3300053730 Bacteria 10941

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048921 Ga0496118_0048169 Ga0496118_0048169_10_777 250
2 3300048927 Ga0496124_0205621 Ga0496124_0205621_694_1473 250
3 3300048925 Ga0496122_0002484 Ga0496122_0002484_2600_3535 262
4 3300048926 Ga0496123_0003115 Ga0496123_0003115_15505_16440 262
5 3300048927 Ga0496124_0031996 Ga0496124_0031996_1091_2026 262
6 3300048929 Ga0496126_0093854 Ga0496126_0093854_912_1847 269
7 3300048090 Ga0495615_0000148 Ga0495615_0000148_2601_3536 270
8 3300048925 Ga0496122_0001187 Ga0496122_0001187_22708_23643 273
9 3300048926 Ga0496123_0002266 Ga0496123_0002266_22514_23449 273
10 3300006051 Ga0075364_10000526 Ga0075364_1000052620 274
11 3300048924 Ga0496121_0003279 Ga0496121_0003279_3364_4308 274
12 3300050491 nmdc:mga00v17_35_c1 nmdc:mga00v17_35_c1_13652_14596 274
13 3300048922 Ga0496119_0003713 Ga0496119_0003713_1743_2678 276
14 3300048925 Ga0496122_0142358 Ga0496122_0142358_362_1297 276
15 3300048925 Ga0496122_0154138 Ga0496122_0154138_149_1084 276
16 3300048926 Ga0496123_0034521 Ga0496123_0034521_590_1525 276
17 3300048928 Ga0496125_0071133 Ga0496125_0071133_1340_2275 276
18 3300053153 Ga0500616_0081589 Ga0500616_0081589_186_1058 276
19 3300039447 Ga0436361_0807815 Ga0436361_0807815_969_1910 278
20 3300003578 Ga0006562J51391_1007200 Ga0006562J51391_10072004 279
21 3300048929 Ga0496126_0370917 Ga0496126_0370917_27_965 279
22 3300037418 Ga0395900_0140202 Ga0395900_0140202_450_1397 281
23 3300048922 Ga0496119_0194271 Ga0496119_0194271_84_1001 281
24 3300048929 Ga0496126_0069117 Ga0496126_0069117_1280_2197 282
25 3300048929 Ga0496126_0118150 Ga0496126_0118150_679_1626 283
26 3300006844 Ga0075428_100136552 Ga0075428_1001365521 284
27 3300006846 Ga0075430_100182272 Ga0075430_1001822722 284
28 3300006880 Ga0075429_100015045 Ga0075429_1000150458 284
29 3300009094 Ga0111539_10035538 Ga0111539_100355386 284
30 3300009147 Ga0114129_10047817 Ga0114129_100478171 284
31 3300027907 Ga0207428_10048354 Ga0207428_100483542 284
32 3300050507 nmdc:mga05p37_5837_c1 nmdc:mga05p37_5837_c1_218_1156 284
33 3300050508 nmdc:mga09592_50990_c1 nmdc:mga09592_50990_c1_2319_3257 284
34 3300050510 nmdc:mga06r32_66336_c1 nmdc:mga06r32_66336_c1_246_1184 284
35 3300050511 nmdc:mga08y16_9287_c1 nmdc:mga08y16_9287_c1_9131_10069 284
36 3300006847 Ga0075431_100043093 Ga0075431_1000430934 285
37 3300006880 Ga0075429_100397517 Ga0075429_1003975171 285
38 3300044735 Ga0466968_0003744 Ga0466968_0003744_2185_3138 285
39 3300049580 Ga0501046_0167965 Ga0501046_0167965_86_1033 285
40 3300049581 Ga0501047_0120474 Ga0501047_0120474_85_1032 285
41 3300049586 Ga0501070_0432380 Ga0501070_0432380_97_1044 285
42 3300049742 Ga0501080_0017475 Ga0501080_0017475_5555_6502 285
43 3300050508 nmdc:mga09592_492334_c1 nmdc:mga09592_492334_c1_45_977 285
44 3300050510 nmdc:mga06r32_48980_c1 nmdc:mga06r32_48980_c1_2011_2943 285
45 3300047472 Ga0495686_0002821 Ga0495686_0002821_12475_13410 289
46 3300005548 Ga0070665_100299419 Ga0070665_1002994191 295
47 3300048905 Ga0496102_0285915 Ga0496102_0285915_474_1436 296
48 3300048910 Ga0496107_0023713 Ga0496107_0023713_1486_2478 296
49 3300048920 Ga0496117_0005934 Ga0496117_0005934_656_1618 296
50 3300048921 Ga0496118_0007957 Ga0496118_0007957_2430_3392 296
51 3300048924 Ga0496121_0000221 Ga0496121_0000221_115783_116775 296
52 3300048929 Ga0496126_0000032 Ga0496126_0000032_255226_256188 296
53 3300028800 Ga0265338_10002526 Ga0265338_1000252617 297
54 3300037466 Ga0395898_0463961 Ga0395898_0463961_87_1040 297
55 3300047472 Ga0495686_0000433 Ga0495686_0000433_9709_10641 297
56 iso_pu_bacteria 2513237141 2513887966 297
57 iso_pu_bacteria 2889306138 2889309356 297
58 3300005327 Ga0070658_10085379 Ga0070658_100853792 298
59 3300005536 Ga0070697_100222690 Ga0070697_1002226901 298
60 3300006051 Ga0075364_10137508 Ga0075364_101375082 298
61 3300006178 Ga0075367_10160729 Ga0075367_101607292 298
62 3300009551 Ga0105238_10147777 Ga0105238_101477772 298
63 3300013306 Ga0163162_10524882 Ga0163162_105248822 298
64 3300021361 Ga0213872_10030709 Ga0213872_100307093 298
65 3300021384 Ga0213876_10022618 Ga0213876_100226183 298
66 3300025292 Ga0209676_1005177 Ga0209676_10051773 298
67 3300025297 Ga0209758_1015440 Ga0209758_10154402 298
68 3300025297 Ga0209758_1044020 Ga0209758_10440202 298
69 3300025297 Ga0209758_1074941 Ga0209758_10749411 298
70 3300025298 Ga0209050_1000217 Ga0209050_10002177 298
71 3300025302 Ga0207426_1001829 Ga0207426_10018296 298
72 3300025924 Ga0207694_10123135 Ga0207694_101231352 298
73 3300031911 Ga0307412_10024899 Ga0307412_100248992 298
74 3300037068 Ga0373925_0170966 Ga0373925_0170966_690_1625 298
75 3300039447 Ga0436361_0526161 Ga0436361_0526161_513_1454 298
76 3300046453 Ga0495627_000099 Ga0495627_000099_45085_46020 298
77 3300046471 Ga0495650_0000842 Ga0495650_0000842_12203_13138 298
78 3300046500 Ga0495596_0000160 Ga0495596_0000160_44923_45861 298
79 3300046501 Ga0495607_0007487 Ga0495607_0007487_29_967 298
80 3300046507 Ga0495606_0001631 Ga0495606_0001631_3416_4351 298
81 3300046507 Ga0495606_0069114 Ga0495606_0069114_611_1549 298
82 3300046512 Ga0495610_0000018 Ga0495610_0000018_93134_94087 298
83 3300046512 Ga0495610_0000879 Ga0495610_0000879_6751_7689 298
84 3300046512 Ga0495610_0008902 Ga0495610_0008902_1481_2416 298
85 3300046519 Ga0495632_0004146 Ga0495632_0004146_8195_9148 298
86 3300046522 Ga0495643_0000132 Ga0495643_0000132_54187_55125 298
87 3300046522 Ga0495643_0002081 Ga0495643_0002081_13119_14057 298
88 3300046522 Ga0495643_0027823 Ga0495643_0027823_1730_2668 298
89 3300046558 Ga0495633_0052178 Ga0495633_0052178_462_1400 298
90 3300046660 Ga0495625_0003524 Ga0495625_0003524_495_1433 298
91 3300046692 Ga0495671_0050985 Ga0495671_0050985_324_1262 298
92 3300047470 Ga0495681_0000020 Ga0495681_0000020_102382_103317 298
93 3300048091 Ga0495626_0013390 Ga0495626_0013390_27_962 298
94 3300048908 Ga0496105_0053323 Ga0496105_0053323_2040_2984 298
95 3300048919 Ga0496116_0000039 Ga0496116_0000039_177434_178369 298
96 3300048919 Ga0496116_0010488 Ga0496116_0010488_5101_6057 298
97 3300048919 Ga0496116_0030690 Ga0496116_0030690_1041_1985 298
98 3300048919 Ga0496116_0053456 Ga0496116_0053456_1449_2405 298
99 3300048920 Ga0496117_0040419 Ga0496117_0040419_537_1472 298
100 3300048920 Ga0496117_0066876 Ga0496117_0066876_1280_2224 298
101 3300048920 Ga0496117_0147028 Ga0496117_0147028_405_1349 298
102 3300048921 Ga0496118_0044909 Ga0496118_0044909_782_1726 298
103 3300048922 Ga0496119_0174726 Ga0496119_0174726_98_1042 298
104 3300048923 Ga0496120_0004720 Ga0496120_0004720_3418_4362 298
105 3300048924 Ga0496121_0000127 Ga0496121_0000127_131331_132275 298
106 3300048924 Ga0496121_0006929 Ga0496121_0006929_1046_1996 298
107 3300048924 Ga0496121_0016277 Ga0496121_0016277_1375_2310 298
108 3300048924 Ga0496121_0027026 Ga0496121_0027026_2636_3592 298
109 3300048924 Ga0496121_0048659 Ga0496121_0048659_411_1346 298
110 3300048924 Ga0496121_0297722 Ga0496121_0297722_91_1026 298
111 3300048925 Ga0496122_0000601 Ga0496122_0000601_57092_58048 298
112 3300048925 Ga0496122_0010091 Ga0496122_0010091_6367_7302 298
113 3300048926 Ga0496123_0000411 Ga0496123_0000411_61915_62871 298
114 3300048926 Ga0496123_0000773 Ga0496123_0000773_7388_8323 298
115 3300048926 Ga0496123_0014471 Ga0496123_0014471_1798_2742 298
116 3300048926 Ga0496123_0158697 Ga0496123_0158697_203_1138 298
117 3300048927 Ga0496124_0000650 Ga0496124_0000650_2484_3419 298
118 3300048927 Ga0496124_0056486 Ga0496124_0056486_1689_2624 298
119 3300048927 Ga0496124_0058482 Ga0496124_0058482_29_973 298
120 3300048927 Ga0496124_0169254 Ga0496124_0169254_327_1262 298
121 3300048928 Ga0496125_0000011 Ga0496125_0000011_563900_564844 298
122 3300048928 Ga0496125_0017362 Ga0496125_0017362_4429_5373 298
123 3300048928 Ga0496125_0026093 Ga0496125_0026093_314_1249 298
124 3300048928 Ga0496125_0037618 Ga0496125_0037618_351_1307 298
125 3300048929 Ga0496126_0000041 Ga0496126_0000041_163531_164466 298
126 3300048929 Ga0496126_0009179 Ga0496126_0009179_7876_8820 298
127 3300048929 Ga0496126_0012568 Ga0496126_0012568_1912_2847 298
128 3300048929 Ga0496126_0016211 Ga0496126_0016211_3205_4140 298
129 3300048929 Ga0496126_0017976 Ga0496126_0017976_5887_6822 298
130 3300049582 Ga0501048_0002822 Ga0501048_0002822_9655_10590 298
131 3300050491 nmdc:mga00v17_65786_c1 nmdc:mga00v17_65786_c1_1023_1973 298
132 3300053087 Ga0500643_000233 Ga0500643_000233_21151_22089 298
133 3300053087 Ga0500643_009477 Ga0500643_009477_2360_3298 298
134 3300053096 Ga0500641_0000502 Ga0500641_0000502_3457_4395 298
135 3300053108 Ga0500562_040109 Ga0500562_040109_191_1132 298
136 3300053153 Ga0500616_0048076 Ga0500616_0048076_278_1216 298
137 3300053730 Ga0500645_001657 Ga0500645_001657_8178_9116 298
138 iso_pu_bacteria 2513237098 2513675677 298
139 iso_pu_bacteria 2524023210 2524465070 298
140 iso_pu_bacteria 2595698237 2596375551 298
141 iso_pu_bacteria 2599185292 2599906143 298
142 iso_pu_bacteria 2643221569 2643861925 298
143 iso_pu_bacteria 2643221594 2643979910 298
144 iso_pu_bacteria 2643221621 2644122500 298
145 iso_pu_bacteria 2751185800 2753359779 298
146 iso_pu_bacteria 2758568016 2758642040 298
147 iso_pu_bacteria 2808606395 2809031643 298
148 iso_pu_bacteria 2818991438 2819550541 298
149 iso_pu_bacteria 2824600985 2824608188 298
150 iso_pu_bacteria 2824609381 2824617143 298
151 iso_pu_bacteria 2824653114 2824660992 298
152 iso_pu_bacteria 2824661429 2824670669 298
153 iso_pu_bacteria 2854911287 2854912431 298
154 iso_pu_bacteria 2857537821 2857540819 298
155 iso_pu_bacteria 2858950400 2858956460 298
156 iso_pu_bacteria 2885383462 2885385032 298
157 iso_pu_bacteria 2888419890 2888426037 298
158 iso_pu_bacteria 2902405164 2902408867 298
159 iso_pu_bacteria 2903768456 2903770169 298
160 iso_pu_bacteria 2915650412 2915653169 298
161 iso_pu_bacteria 2928125067 2928128251 298
162 iso_pu_bacteria 2929615660 2929623018 298
163 iso_pu_bacteria 2929624759 2929631613 298
164 iso_pu_bacteria 2933577622 2933584778 298
165 iso_pu_bacteria 2935684952 2935692341 298
166 iso_pu_bacteria 2935713505 2935720421 298
167 iso_pu_bacteria 2935722832 2935729702 298
168 iso_pu_bacteria 2935732158 2935739316 298
169 iso_pu_bacteria 2935741537 2935748143 298
170 iso_pu_bacteria 2935750917 2935758346 298
171 iso_pu_bacteria 2940556831 2940564250 298
172 iso_pu_bacteria 2941479691 2941482360 298
173 iso_pu_bacteria 8054302542 8054307314 298
174 iso_pu_bacteria 8055742211 8055744620 298
175 iso_pu_bacteria 8056681323 8056684168 298
176 iso_pu_bacteria 2528768022 2528853641 299
177 3300005262 Ga0065165_1002731 Ga0065165_100273110 300
178 3300046455 Ga0495603_0138696 Ga0495603_0138696_440_1384 300
179 3300053139 Ga0500568_0012923 Ga0500568_0012923_1191_2180 300
180 iso_pu_bacteria 2728368998 2728751117 300
181 3300009545 Ga0105237_10437982 Ga0105237_104379821 301
182 3300046684 Ga0495669_0024892 Ga0495669_0024892_1467_2411 301
183 3300048908 Ga0496105_0151420 Ga0496105_0151420_832_1773 301
184 3300048917 Ga0496114_0456627 Ga0496114_0456627_14_961 301
185 3300013306 Ga0163162_10014385 Ga0163162_100143858 303
186 3300046516 Ga0495628_0025226 Ga0495628_0025226_3083_4036 303
187 3300047319 Ga0495674_0031614 Ga0495674_0031614_2066_3022 303
188 3300047443 Ga0495687_000021 Ga0495687_000021_132355_133317 303
189 3300047472 Ga0495686_0000081 Ga0495686_0000081_119591_120547 303
190 3300053125 Ga0500618_003109 Ga0500618_003109_1519_2514 303
191 3300001989 JGI24739J22299_10036705 JGI24739J22299_100367053 304
192 3300002067 JGI24735J21928_10008562 JGI24735J21928_100085625 304
193 3300005455 Ga0070663_100054345 Ga0070663_1000543452 304
194 3300009011 Ga0105251_10001088 Ga0105251_1000108817 304
195 3300009011 Ga0105251_10039286 Ga0105251_100392864 304
196 3300009036 Ga0105244_10084692 Ga0105244_100846922 304
197 3300009092 Ga0105250_10071296 Ga0105250_100712962 304
198 3300009093 Ga0105240_10139383 Ga0105240_101393833 304
199 3300009177 Ga0105248_10075928 Ga0105248_100759285 304
200 3300009551 Ga0105238_10038986 Ga0105238_100389862 304
201 3300013105 Ga0157369_10102255 Ga0157369_101022552 304
202 3300013306 Ga0163162_10003009 Ga0163162_100030098 304
203 3300013308 Ga0157375_10377810 Ga0157375_103778101 304
204 3300017792 Ga0163161_10182594 Ga0163161_101825941 304
205 3300025302 Ga0207426_1002298 Ga0207426_10022982 304
206 3300025904 Ga0207647_10019410 Ga0207647_100194105 304
207 3300025924 Ga0207694_10014065 Ga0207694_100140656 304
208 3300025941 Ga0207711_10040381 Ga0207711_100403815 304
209 3300026067 Ga0207678_10126523 Ga0207678_101265233 304
210 3300044765 Ga0466970_0103278 Ga0466970_0103278_334_1308 304
211 3300046458 Ga0495591_005854 Ga0495591_005854_233_1186 304
212 3300046459 Ga0495629_0000160 Ga0495629_0000160_47765_48718 304
213 3300046459 Ga0495629_0016213 Ga0495629_0016213_664_1644 304
214 3300046460 Ga0495638_0001356 Ga0495638_0001356_292_1245 304
215 3300046463 Ga0495653_0007456 Ga0495653_0007456_4578_5558 304
216 3300046471 Ga0495650_0001257 Ga0495650_0001257_6121_7074 304
217 3300046472 Ga0495580_0098584 Ga0495580_0098584_839_1819 304
218 3300046473 Ga0495582_0009013 Ga0495582_0009013_1651_2604 304
219 3300046474 Ga0495605_0009516 Ga0495605_0009516_4140_5093 304
220 3300046477 Ga0495664_0021814 Ga0495664_0021814_1124_2104 304
221 3300046477 Ga0495664_0150142 Ga0495664_0150142_333_1286 304
222 3300046477 Ga0495664_0150713 Ga0495664_0150713_235_1215 304
223 3300046507 Ga0495606_0022486 Ga0495606_0022486_2526_3614 304
224 3300046507 Ga0495606_0049530 Ga0495606_0049530_731_1684 304
225 3300046507 Ga0495606_0101005 Ga0495606_0101005_174_1127 304
226 3300046513 Ga0495616_0155852 Ga0495616_0155852_54_1007 304
227 3300046515 Ga0495620_0050806 Ga0495620_0050806_322_1302 304
228 3300046516 Ga0495628_0013332 Ga0495628_0013332_665_1645 304
229 3300046524 Ga0495648_0180698 Ga0495648_0180698_87_1040 304
230 3300046528 Ga0495642_0003929 Ga0495642_0003929_4314_5267 304
231 3300046529 Ga0495652_0064462 Ga0495652_0064462_535_1515 304
232 3300046530 Ga0495654_0011505 Ga0495654_0011505_287_1240 304
233 3300046531 Ga0495665_0004103 Ga0495665_0004103_4839_5819 304
234 3300046531 Ga0495665_0155435 Ga0495665_0155435_166_1119 304
235 3300046535 Ga0495586_0025090 Ga0495586_0025090_1101_2054 304
236 3300046542 Ga0495597_0008661 Ga0495597_0008661_737_1717 304
237 3300046543 Ga0495645_0001056 Ga0495645_0001056_1300_2253 304
238 3300046543 Ga0495645_0047404 Ga0495645_0047404_1224_2177 304
239 3300046559 Ga0495667_0014838 Ga0495667_0014838_2284_3237 304
240 3300046663 Ga0495635_0009868 Ga0495635_0009868_2679_3659 304
241 3300046674 Ga0495588_0142723 Ga0495588_0142723_239_1192 304
242 3300046678 Ga0495599_0140695 Ga0495599_0140695_446_1426 304
243 3300046679 Ga0495623_0003037 Ga0495623_0003037_5326_6306 304
244 3300046680 Ga0495646_0002443 Ga0495646_0002443_3166_4146 304
245 3300046680 Ga0495646_0058686 Ga0495646_0058686_935_1888 304
246 3300046684 Ga0495669_0015383 Ga0495669_0015383_466_1419 304
247 3300046689 Ga0495613_0006582 Ga0495613_0006582_3280_4233 304
248 3300046690 Ga0495624_0000802 Ga0495624_0000802_4915_5895 304
249 3300046694 Ga0495649_0005294 Ga0495649_0005294_166_1119 304
250 3300047319 Ga0495674_0027233 Ga0495674_0027233_2933_3913 304
251 3300047323 Ga0495683_0008194 Ga0495683_0008194_1526_2506 304
252 3300047443 Ga0495687_009483 Ga0495687_009483_3026_3979 304
253 3300047443 Ga0495687_014713 Ga0495687_014713_2796_3776 304
254 3300047444 Ga0495675_0131929 Ga0495675_0131929_11_991 304
255 3300047444 Ga0495675_0215648 Ga0495675_0215648_13_966 304
256 3300047673 Ga0495593_0005267 Ga0495593_0005267_5514_6494 304
257 3300048088 Ga0495602_0002616 Ga0495602_0002616_13815_14795 304
258 3300048903 Ga0496100_0000440 Ga0496100_0000440_13139_14119 304
259 3300048904 Ga0496101_0000570 Ga0496101_0000570_10819_11799 304
260 3300048904 Ga0496101_0024491 Ga0496101_0024491_621_1574 304
261 3300048905 Ga0496102_0005349 Ga0496102_0005349_6056_7009 304
262 3300048906 Ga0496103_0028979 Ga0496103_0028979_1950_2930 304
263 3300048907 Ga0496104_0048109 Ga0496104_0048109_3024_4004 304
264 3300048908 Ga0496105_0168639 Ga0496105_0168639_579_1532 304
265 3300048909 Ga0496106_0011296 Ga0496106_0011296_68_1048 304
266 3300048909 Ga0496106_0038964 Ga0496106_0038964_646_1599 304
267 3300048909 Ga0496106_0355235 Ga0496106_0355235_179_1132 304
268 3300048914 Ga0496111_0012135 Ga0496111_0012135_3258_4238 304
269 3300048916 Ga0496113_0018998 Ga0496113_0018998_280_1260 304
270 3300048917 Ga0496114_0019912 Ga0496114_0019912_167_1120 304
271 3300048918 Ga0496115_0014084 Ga0496115_0014084_2667_3620 304
272 3300048919 Ga0496116_0071856 Ga0496116_0071856_432_1412 304
273 3300048920 Ga0496117_0040777 Ga0496117_0040777_1913_2893 304
274 3300048921 Ga0496118_0020787 Ga0496118_0020787_3710_4690 304
275 3300048924 Ga0496121_0006392 Ga0496121_0006392_662_1642 304
276 3300048925 Ga0496122_0025993 Ga0496122_0025993_1597_2577 304
277 3300048926 Ga0496123_0016532 Ga0496123_0016532_4817_5797 304
278 3300048927 Ga0496124_0032982 Ga0496124_0032982_1871_2851 304
279 3300048928 Ga0496125_0001990 Ga0496125_0001990_2110_3090 304
280 3300048929 Ga0496126_0272923 Ga0496126_0272923_13_966 304

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03547

Mem_trans

Membrane transport protein

42

339

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wks-assembly1.cif.gz_A apo state of atpin3 0.8052 6 302
7qpc-assembly1.cif.gz_A inward-facing npa bound form of auxin transporter pin8 0.7967 6 304
7wks-assembly1.cif.gz_A apo state of atpin3 0.7865 6 302
7qpc-assembly1.cif.gz_A inward-facing npa bound form of auxin transporter pin8 0.7827 6 304
7y9u-assembly1.cif.gz_A structure of the auxin exporter pin1 in arabidopsis thaliana in the npa-bound state 0.7552 1 302
ID Description Score Start End Superfamily
af_Q5JLM1_10_355_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8586 6 297 1.20.1530.20
af_Q9FKY4_9_387_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8351 6 299 1.20.1530.20
af_Q5JLM1_10_355_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8253 6 297 1.20.1530.20
af_Q9FKY4_9_387_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8078 6 299 1.20.1530.20
af_I1MI30_9_487_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.7994 4 299 1.20.1530.20
ID Description Score Start End GO Terms
AF-A0A6J5EEM3-F1-model_v4 Transporter YfdV 0.97 6 303 GO:0016020
GO:0055085
AF-A0A6F8PWE0-F1-model_v4 Transporter 0.9596 6 302 GO:0005886
GO:0055085
AF-A0A3A6RJW7-F1-model_v4 AEC family transporter 0.9582 4 303 GO:0005886
GO:0055085
AF-A0A437LVP5-F1-model_v4 AEC family transporter 0.9582 6 302 GO:0005886
GO:0055085
AF-A0A7X7AGK7-F1-model_v4 deleted 0.9572 6 302

Feature Viewer

pLDDT pTM Quality
82.33 0.83 High
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Predicted Structure (AlphaFold2)

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