F383651

General Info

Members Datasets Scaffolds Average Seq Length
280 166 274 158

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_11278015|Ga0105248_112780152
Length 176
Sequence MSEPPVAAPSTTSXXTESTEHPSIVRFREAHARLGGTGEIVILPDSVHTAALAAEALGCEVGAIANSLLFDAGGTPALILTSGAHRVDTEATAARIGAPRLDRAAPAFVREHTGQVIGGVSPIGHPAPVPTWIDSWLRKYDVIWAAAGHPAAVFSTSYVELVSMTGATEVDVEGDH

Samples

Sample ID Description Type Environment
1 2643221617 Nocardioides sp. Root79 Isolate Unclassified
2 2643221620 Nocardioides sp. Root240 Isolate Unclassified
3 2739367898 Nocardioides sp. CF479 Isolate Unclassified
4 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
5 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
6 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
89 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
90 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
91 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
92 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
97 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
98 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
107 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
142 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
160 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
161 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
165 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
166 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0.71
Isolates 2.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.64
Nodule 0.36
Rhizoplane 5
Rhizosphere 76.79
Stem 0
Stem Tuber 0
Unclassified 3.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10040419 3300001979 Bacteria 1414
2 JGI24735J21928_10046198 3300002067 Bacteria 1263
3 Ga0070680_100568849 3300005336 Bacteria 972
4 Ga0070660_100074039 3300005339 Bacteria 2664
5 Ga0070687_100067141 3300005343 Bacteria 1913
6 Ga0070674_100547262 3300005356 Bacteria 971
7 Ga0070667_100031825 3300005367 Bacteria 4397
8 Ga0070701_10032720 3300005438 Bacteria 2592
9 Ga0070700_100009348 3300005441 Bacteria 5375
10 Ga0070678_101026440 3300005456 Bacteria 759
11 Ga0070681_10891568 3300005458 Bacteria 808
12 Ga0068867_100696410 3300005459 Bacteria 896
13 Ga0070685_10046561 3300005466 Bacteria 2490
14 Ga0070685_10186918 3300005466 Bacteria 1338
15 Ga0070685_10371290 3300005466 Bacteria 983
16 Ga0070679_100050831 3300005530 Bacteria 4129
17 Ga0070672_100666042 3300005543 Bacteria 910
18 Ga0070665_100103262 3300005548 Bacteria 2854
19 Ga0068855_101177351 3300005563 Bacteria 798
20 Ga0070664_100892009 3300005564 Bacteria 834
21 Ga0068857_100333780 3300005577 Bacteria 1402
22 Ga0070702_100192352 3300005615 Bacteria 1344
23 Ga0070702_100989184 3300005615 Bacteria 665
24 Ga0068864_100998263 3300005618 Bacteria 830
25 Ga0068866_10133297 3300005718 Bacteria 1416
26 Ga0068861_100259269 3300005719 Bacteria 1488
27 Ga0068870_10327611 3300005840 Bacteria 975
28 Ga0068870_10494604 3300005840 Bacteria 814
29 Ga0068863_100455891 3300005841 Bacteria 1255
30 Ga0068860_100001063 3300005843 Bacteria 30293
31 Ga0081539_10311910 3300005985 Bacteria 672
32 Ga0075365_10003533 3300006038 Bacteria 8082
33 Ga0075365_10010003 3300006038 Bacteria 5494
34 Ga0075365_10023514 3300006038 Bacteria 3877
35 Ga0075365_10052949 3300006038 Bacteria 2686
36 Ga0075365_10154630 3300006038 Bacteria 1596
37 Ga0075365_10426173 3300006038 Bacteria 937
38 Ga0075368_10000810 3300006042 Bacteria 9626
39 Ga0075363_100020945 3300006048 Bacteria 3285
40 Ga0075363_100622225 3300006048 Bacteria 648
41 Ga0075364_10013408 3300006051 Bacteria 5037
42 Ga0075364_10068820 3300006051 Bacteria 2328
43 Ga0075364_10138043 3300006051 Bacteria 1639
44 Ga0075367_10030034 3300006178 Bacteria 3113
45 Ga0075367_10168015 3300006178 Bacteria 1366
46 Ga0075367_10190356 3300006178 Bacteria 1280
47 Ga0075370_10036137 3300006353 Bacteria 2774
48 Ga0068865_100365964 3300006881 Bacteria 1172
49 Ga0068865_100782177 3300006881 Bacteria 822
50 Ga0111539_10838435 3300009094 Bacteria 1070
51 Ga0105243_10240556 3300009148 Bacteria 1611
52 Ga0105243_10276454 3300009148 Bacteria 1510
53 Ga0105243_10405693 3300009148 Bacteria 1267
54 Ga0105243_11187181 3300009148 Bacteria 776
55 Ga0105243_11921517 3300009148 Bacteria 625
56 Ga0105242_10650393 3300009176 Bacteria 1025
57 Ga0105248_11278015 3300009177 Bacteria 830
58 Ga0105249_10649068 3300009553 Bacteria 1113
59 Ga0105249_10812964 3300009553 Bacteria 999
60 Ga0157372_10452942 3300013307 Bacteria 1495
61 Ga0157372_11261360 3300013307 Bacteria 853
62 Ga0157375_10096784 3300013308 Bacteria 3025
63 Ga0157375_10359108 3300013308 Bacteria 1623
64 Ga0157375_11205159 3300013308 Bacteria 888
65 Ga0157375_11350222 3300013308 Bacteria 839
66 Ga0163163_10016900 3300014325 Bacteria 6792
67 Ga0163163_10126223 3300014325 Bacteria 2597
68 Ga0157380_11007972 3300014326 Bacteria 867
69 Ga0182008_10017058 3300014497 Bacteria 3768
70 Ga0157377_10290634 3300014745 Bacteria 1075
71 Ga0157377_10991499 3300014745 Bacteria 635
72 Ga0163161_10014456 3300017792 Bacteria 5496
73 Ga0163161_10970345 3300017792 Bacteria 724
74 Ga0206353_10019567 3300020082 Bacteria 619
75 Ga0206353_11696727 3300020082 Bacteria 1983
76 Ga0207642_10222048 3300025899 Bacteria 1056
77 Ga0207688_10051827 3300025901 Bacteria 2299
78 Ga0207688_10102533 3300025901 Bacteria 1654
79 Ga0207643_10035654 3300025908 Bacteria 2790
80 Ga0207707_10218411 3300025912 Bacteria 1659
81 Ga0207707_10808535 3300025912 Bacteria 781
82 Ga0207660_10747188 3300025917 Bacteria 798
83 Ga0207662_10349126 3300025918 Bacteria 993
84 Ga0207657_10084915 3300025919 Bacteria 2653
85 Ga0207652_10148176 3300025921 Bacteria 2101
86 Ga0207690_11322129 3300025932 Bacteria 602
87 Ga0207669_10343214 3300025937 Bacteria 1151
88 Ga0207669_10540190 3300025937 Bacteria 939
89 Ga0207691_10597156 3300025940 Bacteria 935
90 Ga0207712_10683762 3300025961 Bacteria 894
91 Ga0207658_10033488 3300025986 Bacteria 3666
92 Ga0207708_10002059 3300026075 Bacteria 14814
93 Ga0207702_11503549 3300026078 Bacteria 667
94 Ga0207676_10656465 3300026095 Bacteria 1013
95 Ga0207674_11374044 3300026116 Bacteria 676
96 Ga0207675_100069479 3300026118 Bacteria 3292
97 Ga0207675_100549729 3300026118 Bacteria 1154
98 Ga0207683_10212206 3300026121 Bacteria 1762
99 Ga0207698_10246616 3300026142 Bacteria 1631
100 Ga0209813_10011031 3300027866 Bacteria 2353
101 Ga0209813_10013033 3300027866 Bacteria 2211
102 Ga0268266_10006059 3300028379 Bacteria 11144
103 Ga0268266_12030904 3300028379 Bacteria 548
104 Ga0268264_10001069 3300028381 Bacteria 27210
105 Ga0316181_1100451 3300030744 Bacteria 865
106 Ga0307408_100874336 3300031548 Bacteria 821
107 Ga0307413_10030622 3300031824 Bacteria 3025
108 Ga0307413_10392507 3300031824 Bacteria 1085
109 Ga0307410_11050947 3300031852 Bacteria 704
110 Ga0307409_100098336 3300031995 Bacteria 2420
111 Ga0307416_100154762 3300032002 Bacteria 2109
112 Ga0307416_100320047 3300032002 Bacteria 1553
113 Ga0307411_10023613 3300032005 Bacteria 3647
114 Ga0307411_10961653 3300032005 Bacteria 762
115 Ga0307415_100327340 3300032126 Bacteria 1280
116 Ga0307415_101407249 3300032126 Bacteria 664
117 Ga0395900_0089516 3300037418 Bacteria 3164
118 Ga0395900_0227945 3300037418 Bacteria 1875
119 Ga0395900_0491361 3300037418 Bacteria 1179
120 Ga0395898_0217408 3300037466 Bacteria 1823
121 Ga0395901_0238772 3300038443 Bacteria 1896
122 Ga0395901_0396080 3300038443 Bacteria 1419
123 Ga0436365_1625775 3300039437 Bacteria 1052
124 Ga0439438_042307 3300041405 Bacteria 1179
125 Ga0439447_017951 3300041407 Bacteria 1918
126 Ga0439461_0074631 3300041410 Bacteria 791
127 Ga0439465_0065497 3300041413 Bacteria 1210
128 Ga0451791_1025227 3300041451 Bacteria 574
129 Ga0451793_1871043 3300041452 Bacteria 610
130 Ga0451837_0395252 3300041494 Bacteria 609
131 Ga0451853_0478429 3300041512 Bacteria 844
132 Ga0451853_2596680 3300041512 Bacteria 1911
133 Ga0439431_0007915 3300041997 Bacteria 2377
134 Ga0439433_0119792 3300041999 Bacteria 663
135 Ga0439445_0009928 3300042004 Bacteria 2247
136 Ga0439432_033544 3300042006 Bacteria 1651
137 Ga0439434_0003481 3300042435 Bacteria 4593
138 Ga0466972_0052789 3300044658 Bacteria 1958
139 Ga0466965_0008117 3300044683 Bacteria 4849
140 Ga0466966_0149316 3300044684 Bacteria 1426
141 Ga0466961_0009538 3300044693 Bacteria 6179
142 Ga0466963_0234542 3300044694 Bacteria 1286
143 Ga0466963_0588678 3300044694 Bacteria 786
144 Ga0466964_0031153 3300044706 Bacteria 2114
145 Ga0466971_0002953 3300044719 Bacteria 7216
146 Ga0466971_0184698 3300044719 Bacteria 981
147 Ga0466971_0265402 3300044719 Bacteria 820
148 Ga0466970_0007715 3300044765 Bacteria 5399
149 Ga0466970_0008508 3300044765 Bacteria 5167
150 Ga0466970_0189510 3300044765 Bacteria 1142
151 Ga0466957_0391532 3300044842 Bacteria 949
152 Ga0466960_0011408 3300044901 Bacteria 3717
153 Ga0466960_0029006 3300044901 Bacteria 2536
154 Ga0466960_0041059 3300044901 Bacteria 2190
155 Ga0466960_0069514 3300044901 Bacteria 1750
156 Ga0466960_0076442 3300044901 Bacteria 1677
157 Ga0466960_0143679 3300044901 Bacteria 1269
158 Ga0466959_0093505 3300045049 Bacteria 2158
159 Ga0466959_0392918 3300045049 Bacteria 943
160 Ga0466958_0074405 3300045836 Bacteria 2082
161 Ga0466967_0022967 3300045976 Bacteria 5103
162 Ga0466967_0035348 3300045976 Bacteria 4252
163 Ga0466967_0056208 3300045976 Bacteria 3469
164 Ga0466967_0190982 3300045976 Bacteria 1935
165 Ga0466967_0258084 3300045976 Bacteria 1667
166 Ga0466967_0278668 3300045976 Bacteria 1604
167 Ga0466967_0476240 3300045976 Bacteria 1223
168 Ga0466967_0487729 3300045976 Bacteria 1208
169 Ga0496101_0384524 3300048904 Bacteria 1104
170 Ga0496102_0002473 3300048905 Bacteria 15773
171 Ga0496106_0286614 3300048909 Bacteria 1320
172 Ga0496106_0329953 3300048909 Bacteria 1225
173 Ga0496107_0461386 3300048910 Bacteria 943
174 Ga0496109_1672882 3300048912 Bacteria 570
175 Ga0496110_0065732 3300048913 Bacteria 3207
176 Ga0496110_0820347 3300048913 Bacteria 835
177 Ga0496110_1076789 3300048913 Bacteria 712
178 Ga0496114_0018520 3300048917 Bacteria 5631
179 Ga0496114_0313837 3300048917 Bacteria 1385
180 Ga0496114_1194570 3300048917 Bacteria 647
181 Ga0501032_0184467 3300049569 Bacteria 1365
182 Ga0501033_0234969 3300049570 Bacteria 1301
183 Ga0501036_0026563 3300049572 Bacteria 4889
184 Ga0501036_0231371 3300049572 Bacteria 1551
185 Ga0501036_0418451 3300049572 Bacteria 1117
186 Ga0501036_0757350 3300049572 Bacteria 801
187 Ga0501037_0329063 3300049573 Bacteria 1057
188 Ga0501038_0036339 3300049574 Bacteria 4323
189 Ga0501038_0685791 3300049574 Bacteria 769
190 Ga0501039_0022837 3300049575 Bacteria 4799
191 Ga0501039_0031912 3300049575 Bacteria 4061
192 Ga0501039_0112790 3300049575 Bacteria 2126
193 Ga0501039_0395527 3300049575 Bacteria 1085
194 Ga0501040_0113127 3300049576 Bacteria 1899
195 Ga0501041_0014648 3300049577 Bacteria 4656
196 Ga0501041_0064485 3300049577 Bacteria 2244
197 Ga0501042_0017236 3300049578 Bacteria 4979
198 Ga0501042_0296393 3300049578 Bacteria 1168
199 Ga0501042_0770630 3300049578 Bacteria 700
200 Ga0501046_0353878 3300049580 Bacteria 1066
201 Ga0501048_0204366 3300049582 Bacteria 1400
202 Ga0501048_1227091 3300049582 Bacteria 539
203 Ga0501067_0065705 3300049583 Bacteria 2008
204 Ga0501067_0096596 3300049583 Bacteria 1641
205 Ga0501067_0099708 3300049583 Bacteria 1613
206 Ga0501067_0519597 3300049583 Bacteria 666
207 Ga0501068_0037193 3300049584 Bacteria 2914
208 Ga0501068_0123461 3300049584 Bacteria 1616
209 Ga0501069_0100591 3300049585 Bacteria 1641
210 Ga0501070_0406755 3300049586 Bacteria 1100
211 Ga0501070_0432159 3300049586 Bacteria 1063
212 Ga0501070_0479835 3300049586 Bacteria 1000
213 Ga0501070_0658918 3300049586 Bacteria 830
214 Ga0501071_0018744 3300049587 Bacteria 4797
215 Ga0501071_0093742 3300049587 Bacteria 2208
216 Ga0501071_0278989 3300049587 Bacteria 1265
217 Ga0501071_1373705 3300049587 Bacteria 545
218 Ga0501072_0020018 3300049588 Bacteria 5182
219 Ga0501072_0069177 3300049588 Bacteria 2787
220 Ga0501072_0456355 3300049588 Bacteria 1012
221 Ga0501074_0611206 3300049590 Bacteria 771
222 Ga0501075_0040253 3300049591 Bacteria 3499
223 Ga0501075_0812785 3300049591 Bacteria 711
224 Ga0501076_0005567 3300049592 Bacteria 9077
225 Ga0501076_0020414 3300049592 Bacteria 5072
226 Ga0501076_0427414 3300049592 Bacteria 1090
227 Ga0501077_0134013 3300049593 Bacteria 1571
228 Ga0501077_0192318 3300049593 Bacteria 1296
229 Ga0501202_197726 3300049652 Bacteria 549
230 Ga0501079_0049627 3300049741 Bacteria 3239
231 Ga0501079_0130477 3300049741 Bacteria 1956
232 Ga0501080_0216440 3300049742 Bacteria 1754
233 Ga0501081_0258515 3300049743 Bacteria 1272
234 Ga0501081_0286915 3300049743 Bacteria 1206
235 Ga0501035_0302872 3300049822 Bacteria 1346
236 Ga0501035_0410143 3300049822 Bacteria 1126
237 Ga0501035_0785438 3300049822 Bacteria 762
238 Ga0501045_0161400 3300049824 Bacteria 1668
239 Ga0501045_0376987 3300049824 Bacteria 1056
240 Ga0501045_1026595 3300049824 Bacteria 604
241 nmdc:mga03n38_114999_c1 3300050490 Bacteria 1315
242 nmdc:mga03n38_25094_c1 3300050490 Bacteria 2444
243 nmdc:mga00v17_10259_c1 3300050491 Bacteria 5108
244 nmdc:mga00v17_113682_c1 3300050491 Bacteria 1719
245 nmdc:mga00v17_8355_c1 3300050491 Bacteria 2679
246 nmdc:mga0yw44_11921_c1 3300050492 Bacteria 4512
247 nmdc:mga0yw44_12161_c1 3300050492 Bacteria 4474
248 nmdc:mga0yw44_16216_c1 3300050492 Bacteria 4020
249 nmdc:mga0yw44_24588_c1 3300050492 Bacteria 3411
250 nmdc:mga0yw44_299829_c1 3300050492 Bacteria 1077
251 nmdc:mga0yw44_304076_c1 3300050492 Bacteria 1069
252 nmdc:mga0yw44_380094_c1 3300050492 Bacteria 954
253 nmdc:mga0yw44_483386_c1 3300050492 Bacteria 840
254 nmdc:mga06z11_12907_c1 3300050494 Bacteria 3649
255 nmdc:mga06z11_19279_c1 3300050494 Bacteria 3133
256 nmdc:mga06z11_301841_c1 3300050494 Bacteria 952
257 nmdc:mga04h51_4788_c1 3300050495 Bacteria 3400
258 nmdc:mga07m45_10960_c1 3300050496 Bacteria 4751
259 nmdc:mga08y16_710613_c1 3300050511 Bacteria 1004
260 Ga0495655_0311125 3300053083 Bacteria 543
261 Ga0495619_0208641 3300053085 Bacteria 1353
262 Ga0500644_0000009 3300053088 Bacteria 127269
263 Ga0500556_0001257 3300053104 Bacteria 11670
264 Ga0500593_018229 3300053117 Bacteria 3057
265 Ga0500568_0092416 3300053139 Bacteria 1140
266 Ga0500573_0079605 3300053140 Bacteria 1863
267 Ga0501084_0233575 3300054114 Bacteria 1552
268 Ga0501084_0498878 3300054114 Bacteria 1029
269 Ga0501084_0511419 3300054114 Bacteria 1015
270 Ga0501082_0283955 3300060353 Bacteria 1441
271 Ga0501082_0304379 3300060353 Bacteria 1388
272 Ga0466962_0175862 3300061719 Bacteria 1043
273 Ga0466962_0311324 3300061719 Bacteria 780
274 Ga0530510_0313934 3300061734 Bacteria 1174

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009148 Ga0105243_11187181 Ga0105243_111871811 133
2 3300032002 Ga0307416_100320047 Ga0307416_1003200472 134
3 3300032005 Ga0307411_10961653 Ga0307411_109616532 134
4 3300050492 nmdc:mga0yw44_483386_c1 nmdc:mga0yw44_483386_c1_20_493 142
5 iso_pu_bacteria 2643221617 2644098909 144
6 iso_pu_bacteria 2643221620 2644114790 144
7 iso_pu_bacteria 8054609563 8054612714 144
8 3300060353 Ga0501082_0304379 Ga0501082_0304379_536_1000 145
9 iso_pu_bacteria 2739367898 2740166979 145
10 iso_pu_bacteria 2811994874 2812332362 145
11 3300005356 Ga0070674_100547262 Ga0070674_1005472622 147
12 3300005459 Ga0068867_100696410 Ga0068867_1006964102 147
13 3300005466 Ga0070685_10046561 Ga0070685_100465614 147
14 3300005615 Ga0070702_100192352 Ga0070702_1001923522 147
15 3300005618 Ga0068864_100998263 Ga0068864_1009982632 147
16 3300005840 Ga0068870_10494604 Ga0068870_104946042 147
17 3300005841 Ga0068863_100455891 Ga0068863_1004558912 147
18 3300009148 Ga0105243_10240556 Ga0105243_102405562 147
19 3300009553 Ga0105249_10812964 Ga0105249_108129642 147
20 3300014325 Ga0163163_10016900 Ga0163163_100169005 147
21 3300014326 Ga0157380_11007972 Ga0157380_110079721 147
22 3300017792 Ga0163161_10014456 Ga0163161_100144566 147
23 3300025908 Ga0207643_10035654 Ga0207643_100356542 147
24 3300025937 Ga0207669_10343214 Ga0207669_103432141 147
25 3300025937 Ga0207669_10540190 Ga0207669_105401902 147
26 3300025940 Ga0207691_10597156 Ga0207691_105971561 147
27 3300025961 Ga0207712_10683762 Ga0207712_106837622 147
28 3300026095 Ga0207676_10656465 Ga0207676_106564652 147
29 3300026142 Ga0207698_10246616 Ga0207698_102466162 147
30 3300041452 Ga0451793_1871043 Ga0451793_1871043_23_493 147
31 3300041494 Ga0451837_0395252 Ga0451837_0395252_122_592 147
32 3300041512 Ga0451853_0478429 Ga0451853_0478429_231_701 147
33 3300044683 Ga0466965_0008117 Ga0466965_0008117_3092_3577 147
34 3300044694 Ga0466963_0234542 Ga0466963_0234542_251_736 147
35 3300044694 Ga0466963_0588678 Ga0466963_0588678_249_719 147
36 3300044706 Ga0466964_0031153 Ga0466964_0031153_1505_1990 147
37 3300044719 Ga0466971_0002953 Ga0466971_0002953_933_1418 147
38 3300044765 Ga0466970_0007715 Ga0466970_0007715_1548_2018 147
39 3300045049 Ga0466959_0093505 Ga0466959_0093505_1448_1918 147
40 3300045836 Ga0466958_0074405 Ga0466958_0074405_1314_1799 147
41 3300045976 Ga0466967_0035348 Ga0466967_0035348_3623_4108 147
42 3300048912 Ga0496109_1672882 Ga0496109_1672882_19_489 147
43 3300048917 Ga0496114_1194570 Ga0496114_1194570_22_492 147
44 3300049583 Ga0501067_0519597 Ga0501067_0519597_64_582 147
45 3300049585 Ga0501069_0100591 Ga0501069_0100591_958_1476 147
46 3300049586 Ga0501070_0432159 Ga0501070_0432159_478_963 147
47 3300049588 Ga0501072_0020018 Ga0501072_0020018_392_898 147
48 3300049742 Ga0501080_0216440 Ga0501080_0216440_620_1126 147
49 3300061719 Ga0466962_0175862 Ga0466962_0175862_530_1015 147
50 3300005543 Ga0070672_100666042 Ga0070672_1006660422 148
51 3300005985 Ga0081539_10311910 Ga0081539_103119101 148
52 3300006038 Ga0075365_10003533 Ga0075365_100035337 148
53 3300006038 Ga0075365_10010003 Ga0075365_100100036 148
54 3300006038 Ga0075365_10023514 Ga0075365_100235142 148
55 3300006038 Ga0075365_10426173 Ga0075365_104261732 148
56 3300006042 Ga0075368_10000810 Ga0075368_100008107 148
57 3300006048 Ga0075363_100020945 Ga0075363_1000209452 148
58 3300006051 Ga0075364_10013408 Ga0075364_100134082 148
59 3300006051 Ga0075364_10138043 Ga0075364_101380433 148
60 3300006178 Ga0075367_10030034 Ga0075367_100300345 148
61 3300006178 Ga0075367_10190356 Ga0075367_101903562 148
62 3300006353 Ga0075370_10036137 Ga0075370_100361372 148
63 3300009094 Ga0111539_10838435 Ga0111539_108384352 148
64 3300009148 Ga0105243_10276454 Ga0105243_102764541 148
65 3300013308 Ga0157375_10359108 Ga0157375_103591082 148
66 3300017792 Ga0163161_10970345 Ga0163161_109703452 148
67 3300020082 Ga0206353_10019567 Ga0206353_100195671 148
68 3300027866 Ga0209813_10013033 Ga0209813_100130333 148
69 3300030744 Ga0316181_1100451 Ga0316181_11004512 148
70 3300032126 Ga0307415_101407249 Ga0307415_1014072492 148
71 3300041405 Ga0439438_042307 Ga0439438_042307_329_802 148
72 3300041407 Ga0439447_017951 Ga0439447_017951_189_662 148
73 3300041410 Ga0439461_0074631 Ga0439461_0074631_183_656 148
74 3300041413 Ga0439465_0065497 Ga0439465_0065497_577_1050 148
75 3300041512 Ga0451853_2596680 Ga0451853_2596680_295_768 148
76 3300041997 Ga0439431_0007915 Ga0439431_0007915_1609_2082 148
77 3300041999 Ga0439433_0119792 Ga0439433_0119792_141_614 148
78 3300042004 Ga0439445_0009928 Ga0439445_0009928_303_776 148
79 3300042006 Ga0439432_033544 Ga0439432_033544_64_537 148
80 3300042435 Ga0439434_0003481 Ga0439434_0003481_313_786 148
81 3300044901 Ga0466960_0011408 Ga0466960_0011408_1623_2096 148
82 3300044901 Ga0466960_0143679 Ga0466960_0143679_415_888 148
83 3300045976 Ga0466967_0258084 Ga0466967_0258084_403_876 148
84 3300045976 Ga0466967_0476240 Ga0466967_0476240_572_1045 148
85 3300048904 Ga0496101_0384524 Ga0496101_0384524_378_851 148
86 3300048909 Ga0496106_0286614 Ga0496106_0286614_460_933 148
87 3300048909 Ga0496106_0329953 Ga0496106_0329953_112_585 148
88 3300048910 Ga0496107_0461386 Ga0496107_0461386_345_818 148
89 3300048913 Ga0496110_0820347 Ga0496110_0820347_27_500 148
90 3300048913 Ga0496110_1076789 Ga0496110_1076789_13_486 148
91 3300049569 Ga0501032_0184467 Ga0501032_0184467_436_909 148
92 3300049570 Ga0501033_0234969 Ga0501033_0234969_254_727 148
93 3300049572 Ga0501036_0026563 Ga0501036_0026563_538_1011 148
94 3300049572 Ga0501036_0231371 Ga0501036_0231371_323_796 148
95 3300049572 Ga0501036_0418451 Ga0501036_0418451_204_677 148
96 3300049573 Ga0501037_0329063 Ga0501037_0329063_208_681 148
97 3300049574 Ga0501038_0036339 Ga0501038_0036339_359_832 148
98 3300049574 Ga0501038_0685791 Ga0501038_0685791_20_493 148
99 3300049575 Ga0501039_0022837 Ga0501039_0022837_4307_4780 148
100 3300049575 Ga0501039_0031912 Ga0501039_0031912_459_932 148
101 3300049575 Ga0501039_0395527 Ga0501039_0395527_362_835 148
102 3300049576 Ga0501040_0113127 Ga0501040_0113127_719_1192 148
103 3300049577 Ga0501041_0014648 Ga0501041_0014648_323_796 148
104 3300049577 Ga0501041_0064485 Ga0501041_0064485_789_1262 148
105 3300049578 Ga0501042_0017236 Ga0501042_0017236_649_1122 148
106 3300049578 Ga0501042_0296393 Ga0501042_0296393_376_849 148
107 3300049578 Ga0501042_0770630 Ga0501042_0770630_66_539 148
108 3300049580 Ga0501046_0353878 Ga0501046_0353878_146_619 148
109 3300049582 Ga0501048_0204366 Ga0501048_0204366_362_835 148
110 3300049583 Ga0501067_0099708 Ga0501067_0099708_360_833 148
111 3300049586 Ga0501070_0406755 Ga0501070_0406755_346_819 148
112 3300049586 Ga0501070_0479835 Ga0501070_0479835_505_978 148
113 3300049586 Ga0501070_0658918 Ga0501070_0658918_23_496 148
114 3300049587 Ga0501071_0018744 Ga0501071_0018744_468_941 148
115 3300049587 Ga0501071_0093742 Ga0501071_0093742_944_1417 148
116 3300049587 Ga0501071_0278989 Ga0501071_0278989_627_1100 148
117 3300049587 Ga0501071_1373705 Ga0501071_1373705_10_483 148
118 3300049588 Ga0501072_0069177 Ga0501072_0069177_1853_2326 148
119 3300049588 Ga0501072_0456355 Ga0501072_0456355_339_812 148
120 3300049591 Ga0501075_0040253 Ga0501075_0040253_664_1137 148
121 3300049591 Ga0501075_0812785 Ga0501075_0812785_35_508 148
122 3300049592 Ga0501076_0005567 Ga0501076_0005567_462_935 148
123 3300049593 Ga0501077_0192318 Ga0501077_0192318_621_1094 148
124 3300049741 Ga0501079_0049627 Ga0501079_0049627_447_920 148
125 3300049743 Ga0501081_0286915 Ga0501081_0286915_288_761 148
126 3300049822 Ga0501035_0302872 Ga0501035_0302872_491_964 148
127 3300049822 Ga0501035_0410143 Ga0501035_0410143_119_592 148
128 3300049824 Ga0501045_0161400 Ga0501045_0161400_880_1353 148
129 3300049824 Ga0501045_0376987 Ga0501045_0376987_46_519 148
130 3300050490 nmdc:mga03n38_25094_c1 nmdc:mga03n38_25094_c1_35_508 148
131 3300050491 nmdc:mga00v17_10259_c1 nmdc:mga00v17_10259_c1_2560_3033 148
132 3300050491 nmdc:mga00v17_113682_c1 nmdc:mga00v17_113682_c1_884_1357 148
133 3300050491 nmdc:mga00v17_8355_c1 nmdc:mga00v17_8355_c1_889_1362 148
134 3300050492 nmdc:mga0yw44_11921_c1 nmdc:mga0yw44_11921_c1_1205_1678 148
135 3300050492 nmdc:mga0yw44_16216_c1 nmdc:mga0yw44_16216_c1_2051_2524 148
136 3300050492 nmdc:mga0yw44_24588_c1 nmdc:mga0yw44_24588_c1_763_1236 148
137 3300050492 nmdc:mga0yw44_304076_c1 nmdc:mga0yw44_304076_c1_412_885 148
138 3300050494 nmdc:mga06z11_12907_c1 nmdc:mga06z11_12907_c1_2266_2739 148
139 3300050496 nmdc:mga07m45_10960_c1 nmdc:mga07m45_10960_c1_2560_3033 148
140 3300050511 nmdc:mga08y16_710613_c1 nmdc:mga08y16_710613_c1_167_640 148
141 3300053085 Ga0495619_0208641 Ga0495619_0208641_844_1320 148
142 3300053088 Ga0500644_0000009 Ga0500644_0000009_70581_71054 148
143 3300053104 Ga0500556_0001257 Ga0500556_0001257_10374_10847 148
144 3300053117 Ga0500593_018229 Ga0500593_018229_1183_1656 148
145 3300053139 Ga0500568_0092416 Ga0500568_0092416_579_1052 148
146 3300053140 Ga0500573_0079605 Ga0500573_0079605_863_1336 148
147 3300054114 Ga0501084_0233575 Ga0501084_0233575_581_1054 148
148 3300054114 Ga0501084_0498878 Ga0501084_0498878_400_873 148
149 3300005343 Ga0070687_100067141 Ga0070687_1000671412 149
150 3300005438 Ga0070701_10032720 Ga0070701_100327202 149
151 3300005441 Ga0070700_100009348 Ga0070700_1000093485 149
152 3300005466 Ga0070685_10186918 Ga0070685_101869182 149
153 3300005548 Ga0070665_100103262 Ga0070665_1001032624 149
154 3300005615 Ga0070702_100989184 Ga0070702_1009891841 149
155 3300005718 Ga0068866_10133297 Ga0068866_101332972 149
156 3300005840 Ga0068870_10327611 Ga0068870_103276112 149
157 3300006048 Ga0075363_100622225 Ga0075363_1006222251 149
158 3300006881 Ga0068865_100365964 Ga0068865_1003659643 149
159 3300006881 Ga0068865_100782177 Ga0068865_1007821772 149
160 3300009148 Ga0105243_10405693 Ga0105243_104056932 149
161 3300009148 Ga0105243_11921517 Ga0105243_119215171 149
162 3300009176 Ga0105242_10650393 Ga0105242_106503932 149
163 3300013307 Ga0157372_10452942 Ga0157372_104529423 149
164 3300013308 Ga0157375_10096784 Ga0157375_100967844 149
165 3300013308 Ga0157375_11205159 Ga0157375_112051592 149
166 3300014325 Ga0163163_10126223 Ga0163163_101262232 149
167 3300014745 Ga0157377_10991499 Ga0157377_109914991 149
168 3300025899 Ga0207642_10222048 Ga0207642_102220481 149
169 3300025901 Ga0207688_10051827 Ga0207688_100518274 149
170 3300025901 Ga0207688_10102533 Ga0207688_101025332 149
171 3300025918 Ga0207662_10349126 Ga0207662_103491262 149
172 3300026075 Ga0207708_10002059 Ga0207708_1000205911 149
173 3300026078 Ga0207702_11503549 Ga0207702_115035491 149
174 3300026118 Ga0207675_100069479 Ga0207675_1000694792 149
175 3300028379 Ga0268266_12030904 Ga0268266_120309041 149
176 3300031548 Ga0307408_100874336 Ga0307408_1008743361 149
177 3300031824 Ga0307413_10030622 Ga0307413_100306221 149
178 3300031852 Ga0307410_11050947 Ga0307410_110509472 149
179 3300031995 Ga0307409_100098336 Ga0307409_1000983363 149
180 3300032002 Ga0307416_100154762 Ga0307416_1001547623 149
181 3300032005 Ga0307411_10023613 Ga0307411_100236134 149
182 3300037418 Ga0395900_0089516 Ga0395900_0089516_1324_1803 149
183 3300037418 Ga0395900_0227945 Ga0395900_0227945_1361_1840 149
184 3300037466 Ga0395898_0217408 Ga0395898_0217408_196_675 149
185 3300038443 Ga0395901_0238772 Ga0395901_0238772_638_1117 149
186 3300039437 Ga0436365_1625775 Ga0436365_1625775_504_986 149
187 3300041451 Ga0451791_1025227 Ga0451791_1025227_36_512 149
188 3300044658 Ga0466972_0052789 Ga0466972_0052789_818_1300 149
189 3300044684 Ga0466966_0149316 Ga0466966_0149316_913_1395 149
190 3300044693 Ga0466961_0009538 Ga0466961_0009538_662_1144 149
191 3300044719 Ga0466971_0184698 Ga0466971_0184698_156_638 149
192 3300044719 Ga0466971_0265402 Ga0466971_0265402_282_764 149
193 3300044765 Ga0466970_0008508 Ga0466970_0008508_1721_2203 149
194 3300044765 Ga0466970_0189510 Ga0466970_0189510_580_1062 149
195 3300044842 Ga0466957_0391532 Ga0466957_0391532_143_622 149
196 3300044901 Ga0466960_0029006 Ga0466960_0029006_1589_2071 149
197 3300044901 Ga0466960_0041059 Ga0466960_0041059_266_748 149
198 3300044901 Ga0466960_0069514 Ga0466960_0069514_744_1226 149
199 3300044901 Ga0466960_0076442 Ga0466960_0076442_565_1044 149
200 3300045049 Ga0466959_0392918 Ga0466959_0392918_186_668 149
201 3300045976 Ga0466967_0022967 Ga0466967_0022967_1179_1661 149
202 3300045976 Ga0466967_0056208 Ga0466967_0056208_1217_1699 149
203 3300045976 Ga0466967_0190982 Ga0466967_0190982_411_890 149
204 3300045976 Ga0466967_0278668 Ga0466967_0278668_642_1124 149
205 3300048905 Ga0496102_0002473 Ga0496102_0002473_13097_13573 149
206 3300048917 Ga0496114_0018520 Ga0496114_0018520_4566_5042 149
207 3300049652 Ga0501202_197726 Ga0501202_197726_29_511 149
208 3300050490 nmdc:mga03n38_114999_c1 nmdc:mga03n38_114999_c1_765_1241 149
209 3300050492 nmdc:mga0yw44_12161_c1 nmdc:mga0yw44_12161_c1_1181_1657 149
210 3300053083 Ga0495655_0311125 Ga0495655_0311125_17_493 149
211 3300061719 Ga0466962_0311324 Ga0466962_0311324_79_561 149
212 3300005367 Ga0070667_100031825 Ga0070667_1000318255 150
213 3300005456 Ga0070678_101026440 Ga0070678_1010264402 150
214 3300005458 Ga0070681_10891568 Ga0070681_108915682 150
215 3300005466 Ga0070685_10371290 Ga0070685_103712902 150
216 3300005564 Ga0070664_100892009 Ga0070664_1008920091 150
217 3300005719 Ga0068861_100259269 Ga0068861_1002592692 150
218 3300005843 Ga0068860_100001063 Ga0068860_10000106327 150
219 3300006038 Ga0075365_10052949 Ga0075365_100529494 150
220 3300006038 Ga0075365_10154630 Ga0075365_101546303 150
221 3300006051 Ga0075364_10068820 Ga0075364_100688204 150
222 3300006178 Ga0075367_10168015 Ga0075367_101680152 150
223 3300009553 Ga0105249_10649068 Ga0105249_106490681 150
224 3300013307 Ga0157372_11261360 Ga0157372_112613602 150
225 3300013308 Ga0157375_11350222 Ga0157375_113502221 150
226 3300014497 Ga0182008_10017058 Ga0182008_100170584 150
227 3300014745 Ga0157377_10290634 Ga0157377_102906342 150
228 3300025912 Ga0207707_10808535 Ga0207707_108085352 150
229 3300025932 Ga0207690_11322129 Ga0207690_113221291 150
230 3300025986 Ga0207658_10033488 Ga0207658_100334883 150
231 3300026118 Ga0207675_100549729 Ga0207675_1005497291 150
232 3300026121 Ga0207683_10212206 Ga0207683_102122062 150
233 3300027866 Ga0209813_10011031 Ga0209813_100110313 150
234 3300028379 Ga0268266_10006059 Ga0268266_100060595 150
235 3300028381 Ga0268264_10001069 Ga0268264_100010695 150
236 3300031824 Ga0307413_10392507 Ga0307413_103925072 150
237 3300032126 Ga0307415_100327340 Ga0307415_1003273402 150
238 3300037418 Ga0395900_0491361 Ga0395900_0491361_305_799 150
239 3300038443 Ga0395901_0396080 Ga0395901_0396080_373_870 150
240 3300045976 Ga0466967_0487729 Ga0466967_0487729_360_863 150
241 3300048913 Ga0496110_0065732 Ga0496110_0065732_922_1416 150
242 3300048917 Ga0496114_0313837 Ga0496114_0313837_595_1089 150
243 3300049572 Ga0501036_0757350 Ga0501036_0757350_98_583 150
244 3300049575 Ga0501039_0112790 Ga0501039_0112790_865_1350 150
245 3300049582 Ga0501048_1227091 Ga0501048_1227091_27_512 150
246 3300049583 Ga0501067_0065705 Ga0501067_0065705_907_1392 150
247 3300049583 Ga0501067_0096596 Ga0501067_0096596_28_513 150
248 3300049584 Ga0501068_0037193 Ga0501068_0037193_618_1103 150
249 3300049584 Ga0501068_0123461 Ga0501068_0123461_310_795 150
250 3300049590 Ga0501074_0611206 Ga0501074_0611206_54_539 150
251 3300049592 Ga0501076_0020414 Ga0501076_0020414_967_1452 150
252 3300049592 Ga0501076_0427414 Ga0501076_0427414_145_630 150
253 3300049593 Ga0501077_0134013 Ga0501077_0134013_463_948 150
254 3300049741 Ga0501079_0130477 Ga0501079_0130477_969_1454 150
255 3300049743 Ga0501081_0258515 Ga0501081_0258515_366_851 150
256 3300049822 Ga0501035_0785438 Ga0501035_0785438_32_517 150
257 3300049824 Ga0501045_1026595 Ga0501045_1026595_36_521 150
258 3300050492 nmdc:mga0yw44_299829_c1 nmdc:mga0yw44_299829_c1_439_936 150
259 3300050492 nmdc:mga0yw44_380094_c1 nmdc:mga0yw44_380094_c1_361_858 150
260 3300050494 nmdc:mga06z11_19279_c1 nmdc:mga06z11_19279_c1_1674_2180 150
261 3300050494 nmdc:mga06z11_301841_c1 nmdc:mga06z11_301841_c1_325_822 150
262 3300050495 nmdc:mga04h51_4788_c1 nmdc:mga04h51_4788_c1_2265_2771 150
263 3300054114 Ga0501084_0511419 Ga0501084_0511419_198_683 150
264 3300060353 Ga0501082_0283955 Ga0501082_0283955_752_1237 150
265 3300061734 Ga0530510_0313934 Ga0530510_0313934_434_919 150
266 iso_pu_bacteria 2855386786 2855387779 150
267 3300001979 JGI24740J21852_10040419 JGI24740J21852_100404193 151
268 3300002067 JGI24735J21928_10046198 JGI24735J21928_100461982 151
269 3300005336 Ga0070680_100568849 Ga0070680_1005688492 151
270 3300005339 Ga0070660_100074039 Ga0070660_1000740394 151
271 3300005530 Ga0070679_100050831 Ga0070679_1000508315 151
272 3300005563 Ga0068855_101177351 Ga0068855_1011773512 151
273 3300005577 Ga0068857_100333780 Ga0068857_1003337802 151
274 3300009177 Ga0105248_11278015 Ga0105248_112780152 151
275 3300020082 Ga0206353_11696727 Ga0206353_116967273 151
276 3300025912 Ga0207707_10218411 Ga0207707_102184112 151
277 3300025917 Ga0207660_10747188 Ga0207660_107471882 151
278 3300025919 Ga0207657_10084915 Ga0207657_100849152 151
279 3300025921 Ga0207652_10148176 Ga0207652_101481762 151
280 3300026116 Ga0207674_11374044 Ga0207674_113740441 151

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

44

164

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rij-assembly2.cif.gz_B epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins 0.9397 17 151
1dbu-assembly1.cif.gz_A crystal structure of cysteinyl-trna(pro) deacylase protein from h. influenzae (hi1434) 0.9121 30 149
1dbx-assembly2.cif.gz_B crystal structure of cysteinyl-trna(pro) deacylase from h. influenzae (hi1434) 0.8877 17 149
3ri0-assembly1.cif.gz_A epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins 0.8771 7 151
2dxa-assembly1.cif.gz_A crystal structure of trans editing enzyme prox from e.coli 0.8745 17 151
ID Description Score Start End Superfamily
1dbxB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8796 17 149 3.90.960.10
af_Q2G1Z4_244_383_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.862 17 132 3.90.960.10
af_Q4D973_68_232_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8535 9 151 3.90.960.10
af_A4HRV9_8_202_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8468 10 150 3.90.960.10
af_A0A0G2L4U2_9_155_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8416 18 150 3.90.960.10
ID Description Score Start End GO Terms
AF-A0A1V1W195-F1-model_v4 YbaK/prolyl-tRNA synthetase associated domain-containing protein 0.9846 19 150 GO:0002161
GO:0004812
AF-A0A2P2CII2-F1-model_v4 YbaK/prolyl-tRNA synthetase associated region 0.9812 19 150 GO:0002161
GO:0004812
AF-A0A6J6CK73-F1-model_v4 Unannotated protein 0.9695 17 151 GO:0002161
AF-A0A1C4MTQ0-F1-model_v4 deleted 0.968 26 151
AF-A8LY64-F1-model_v4 YbaK/prolyl-tRNA synthetase associated region 0.9667 17 150 GO:0002161
GO:0004812

Feature Viewer

pLDDT pTM Quality
86.41 0.79 High
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Predicted Structure (AlphaFold2)

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