F383036

General Info

Members Datasets Scaffolds Average Seq Length
279 148 278 224

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10030335|Ga0105248_100303354
Length 254
Sequence MVVIDATDSYGLSRTKTTPAFGQPLLYPVSMQRGIFITFEGLDGSGKTTQLRRLSSWLESEGHKVVTLRQPGGTALGDRIRSILLDSRSEDTLGTIAPLAEMALMFADRAQSIHEIILPALASGAIVLCDRYTDSSEAYQGAGRELGSERILAMHRAVCDNLQPDLTLLLLPSLESSLLRARRRNQRSAQQKGTDEGRFEREDDDFYRRIYHAYEAIAAREPQRVTAIRDDASIDDIQARIREIVAARLGTTVS

Samples

Sample ID Description Type Environment
1 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
99 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
100 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
101 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
102 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
103 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
119 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
120 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
124 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
148 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0.36
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.43
Nodule 0
Rhizoplane 1.43
Rhizosphere 94.98
Stem 0
Stem Tuber 0
Unclassified 2.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058862_10013630 3300004803 Unclassified 1410
2 Ga0070658_10000004 3300005327 Bacteria 402230
3 Ga0070658_10020924 3300005327 Bacteria 5240
4 Ga0070658_10031393 3300005327 Bacteria 4266
5 Ga0070658_10058743 3300005327 Bacteria 3131
6 Ga0070658_10335107 3300005327 Bacteria 1293
7 Ga0070670_100407337 3300005331 Bacteria 1201
8 Ga0070666_10156653 3300005335 Bacteria 1591
9 Ga0070682_100092296 3300005337 Unclassified 1983
10 Ga0070682_100599088 3300005337 Bacteria 870
11 Ga0070660_100014364 3300005339 Bacteria 5702
12 Ga0070660_100040185 3300005339 Bacteria 3559
13 Ga0070660_100042646 3300005339 Bacteria 3464
14 Ga0070668_100113751 3300005347 Bacteria 2156
15 Ga0070671_100003603 3300005355 Bacteria 12114
16 Ga0070659_100001877 3300005366 Bacteria 15054
17 Ga0070659_100124428 3300005366 Unclassified 2091
18 Ga0070667_101196195 3300005367 Bacteria 711
19 Ga0070714_100089703 3300005435 Bacteria 2691
20 Ga0070714_100580262 3300005435 Bacteria 1075
21 Ga0070711_100024617 3300005439 Bacteria 3929
22 Ga0070663_100049405 3300005455 Bacteria 2987
23 Ga0070663_100722800 3300005455 Bacteria 848
24 Ga0070681_10040779 3300005458 Unclassified 4651
25 Ga0070679_100249093 3300005530 Unclassified 1733
26 Ga0068853_100000244 3300005539 Bacteria 38219
27 Ga0068853_100390961 3300005539 Bacteria 1300
28 Ga0070665_100033876 3300005548 Bacteria 5138
29 Ga0068855_100009618 3300005563 Bacteria 11665
30 Ga0068855_100062699 3300005563 Bacteria 4339
31 Ga0068855_100120535 3300005563 Bacteria 3002
32 Ga0068855_100316334 3300005563 Bacteria 1726
33 Ga0068855_100487961 3300005563 Unclassified 1340
34 Ga0068855_100619558 3300005563 Unclassified 1165
35 Ga0068855_100730198 3300005563 Bacteria 1058
36 Ga0068854_100000016 3300005578 Bacteria 145396
37 Ga0068854_100186943 3300005578 Bacteria 1621
38 Ga0068856_100209694 3300005614 Bacteria 1963
39 Ga0068856_100432717 3300005614 Bacteria 1336
40 Ga0068856_100609760 3300005614 Unclassified 1112
41 Ga0068852_100108755 3300005616 Bacteria 2516
42 Ga0068852_100146741 3300005616 Bacteria 2189
43 Ga0068852_100618801 3300005616 Bacteria 1088
44 Ga0068864_100016174 3300005618 Bacteria 6209
45 Ga0068863_100137128 3300005841 Bacteria 2338
46 Ga0068858_100172357 3300005842 Bacteria 2041
47 Ga0081540_1009299 3300005983 Bacteria 6780
48 Ga0070712_100002824 3300006175 Bacteria 10749
49 Ga0075436_100332918 3300006914 Bacteria 1092
50 Ga0105240_10003749 3300009093 Bacteria 23477
51 Ga0105240_10010440 3300009093 Bacteria 13049
52 Ga0105240_10014142 3300009093 Bacteria 10903
53 Ga0105240_10081810 3300009093 Bacteria 3967
54 Ga0105240_10138805 3300009093 Bacteria 2908
55 Ga0105240_10216513 3300009093 Bacteria 2234
56 Ga0105240_10292223 3300009093 Bacteria 1868
57 Ga0105240_11064548 3300009093 Bacteria 862
58 Ga0105240_11168128 3300009093 Bacteria 816
59 Ga0105245_10670799 3300009098 Unclassified 1068
60 Ga0105241_10211492 3300009174 Bacteria 1625
61 Ga0105248_10024142 3300009177 Bacteria 6756
62 Ga0105248_10030335 3300009177 Bacteria 6037
63 Ga0105248_10618609 3300009177 Bacteria 1222
64 Ga0105237_10012226 3300009545 Bacteria 9048
65 Ga0105237_10083523 3300009545 Bacteria 3185
66 Ga0105237_10296968 3300009545 Bacteria 1618
67 Ga0105238_10003571 3300009551 Bacteria 15505
68 Ga0105238_10025241 3300009551 Bacteria 6057
69 Ga0105238_10071096 3300009551 Bacteria 3477
70 Ga0105249_10027220 3300009553 Bacteria 5158
71 Ga0157371_10169546 3300013102 Unclassified 1560
72 Ga0157370_10008248 3300013104 Bacteria 11249
73 Ga0157370_10075793 3300013104 Bacteria 3170
74 Ga0157370_10122620 3300013104 Bacteria 2427
75 Ga0157370_10143390 3300013104 Bacteria 2225
76 Ga0157370_10207291 3300013104 Bacteria 1817
77 Ga0157370_10268975 3300013104 Unclassified 1575
78 Ga0157370_10367850 3300013104 Bacteria 1325
79 Ga0157369_10018800 3300013105 Bacteria 7745
80 Ga0157369_10050551 3300013105 Bacteria 4501
81 Ga0157369_10053117 3300013105 Bacteria 4380
82 Ga0157369_10132444 3300013105 Bacteria 2641
83 Ga0157369_10257238 3300013105 Unclassified 1821
84 Ga0157369_10301978 3300013105 Unclassified 1665
85 Ga0157369_10443102 3300013105 Bacteria 1345
86 Ga0157374_10060686 3300013296 Bacteria 3540
87 Ga0157374_10180739 3300013296 Bacteria 2060
88 Ga0163162_10000143 3300013306 Bacteria 65537
89 Ga0157372_10027868 3300013307 Bacteria 6157
90 Ga0157372_10063006 3300013307 Bacteria 4156
91 Ga0157372_10467585 3300013307 Bacteria 1470
92 Ga0163163_10244688 3300014325 Bacteria 1844
93 Ga0157379_10368795 3300014968 Bacteria 1316
94 Ga0157376_10012947 3300014969 Bacteria 6211
95 Ga0213872_10003161 3300021361 Bacteria 9244
96 Ga0213872_10010773 3300021361 Bacteria 4341
97 Ga0213872_10100218 3300021361 Unclassified 1292
98 Ga0209233_1003364 3300025261 Bacteria 5652
99 Ga0207680_10133489 3300025903 Bacteria 1638
100 Ga0207705_10000024 3300025909 Bacteria 259977
101 Ga0207705_10003519 3300025909 Bacteria 11933
102 Ga0207705_10004909 3300025909 Bacteria 10037
103 Ga0207705_10082345 3300025909 Bacteria 2347
104 Ga0207705_10277991 3300025909 Unclassified 1281
105 Ga0207705_10417944 3300025909 Bacteria 1038
106 Ga0207705_10655792 3300025909 Bacteria 816
107 Ga0207695_10000002 3300025913 Bacteria 2188391
108 Ga0207695_10000532 3300025913 Bacteria 79697
109 Ga0207695_10016630 3300025913 Bacteria 8600
110 Ga0207695_10043943 3300025913 Bacteria 4757
111 Ga0207695_10295137 3300025913 Bacteria 1513
112 Ga0207660_10019212 3300025917 Bacteria 4564
113 Ga0207660_10538516 3300025917 Bacteria 949
114 Ga0207657_10001844 3300025919 Bacteria 22887
115 Ga0207657_10001860 3300025919 Bacteria 22810
116 Ga0207657_10139273 3300025919 Bacteria 1983
117 Ga0207649_10227920 3300025920 Bacteria 1331
118 Ga0207652_10538839 3300025921 Bacteria 1049
119 Ga0207694_10011356 3300025924 Bacteria 6723
120 Ga0207694_10476859 3300025924 Unclassified 1043
121 Ga0207694_10535610 3300025924 Unclassified 982
122 Ga0207664_10154686 3300025929 Bacteria 1951
123 Ga0207664_10325979 3300025929 Unclassified 1356
124 Ga0207664_10387274 3300025929 Unclassified 1242
125 Ga0207644_10085378 3300025931 Bacteria 2341
126 Ga0207690_10001967 3300025932 Bacteria 12604
127 Ga0207711_10044376 3300025941 Bacteria 3795
128 Ga0207711_10047180 3300025941 Bacteria 3682
129 Ga0207661_10010698 3300025944 Bacteria 6612
130 Ga0207667_10001884 3300025949 Bacteria 26389
131 Ga0207667_10041585 3300025949 Bacteria 4888
132 Ga0207667_10084598 3300025949 Bacteria 3284
133 Ga0207667_10229274 3300025949 Bacteria 1902
134 Ga0207667_10242482 3300025949 Bacteria 1844
135 Ga0207667_10342675 3300025949 Bacteria 1525
136 Ga0207667_10387664 3300025949 Unclassified 1423
137 Ga0207667_10501158 3300025949 Bacteria 1232
138 Ga0207667_10612940 3300025949 Unclassified 1097
139 Ga0207712_10060293 3300025961 Bacteria 2689
140 Ga0207668_10450867 3300025972 Bacteria 1098
141 Ga0207640_10000001 3300025981 Bacteria 628778
142 Ga0207640_10031470 3300025981 Unclassified 3278
143 Ga0207640_10656969 3300025981 Unclassified 894
144 Ga0207703_10122915 3300026035 Bacteria 2231
145 Ga0207639_10000261 3300026041 Bacteria 38204
146 Ga0207639_10021322 3300026041 Unclassified 4652
147 Ga0207678_10003233 3300026067 Bacteria 14718
148 Ga0207678_10025377 3300026067 Bacteria 5174
149 Ga0207678_10051659 3300026067 Bacteria 3548
150 Ga0207678_10109797 3300026067 Bacteria 2353
151 Ga0207702_10043519 3300026078 Bacteria 3770
152 Ga0207702_10225310 3300026078 Bacteria 1749
153 Ga0207702_10388900 3300026078 Bacteria 1343
154 Ga0207702_10405461 3300026078 Bacteria 1315
155 Ga0207676_10054800 3300026095 Bacteria 3126
156 Ga0207674_10001311 3300026116 Bacteria 32478
157 Ga0207674_10356868 3300026116 Bacteria 1413
158 Ga0207698_10029083 3300026142 Bacteria 3952
159 Ga0207698_10080162 3300026142 Bacteria 2629
160 Ga0207698_10237417 3300026142 Bacteria 1659
161 Ga0268266_10001615 3300028379 Bacteria 26291
162 Ga0268266_10001974 3300028379 Bacteria 22989
163 Ga0268266_10090070 3300028379 Bacteria 2688
164 Ga0265336_10005629 3300028666 Bacteria 4602
165 Ga0265338_10006729 3300028800 Bacteria 14513
166 Ga0265324_10023807 3300029957 Bacteria 2179
167 Ga0265332_10077814 3300031238 Bacteria 1408
168 Ga0265328_10032484 3300031239 Bacteria 1937
169 Ga0265328_10032508 3300031239 Unclassified 1936
170 Ga0265339_10000580 3300031249 Bacteria 28541
171 Ga0265316_10015671 3300031344 Bacteria 6615
172 Ga0265316_10065403 3300031344 Unclassified 2816
173 Ga0265314_10004060 3300031711 Bacteria 13816
174 Ga0307510_10075439 3300033180 Unclassified 3324
175 Ga0307510_10131155 3300033180 Bacteria 2179
176 Ga0307510_10236390 3300033180 Bacteria 1325
177 Ga0373937_0205267 3300036401 Bacteria 1853
178 Ga0373937_0308413 3300036401 Bacteria 1497
179 Ga0436360_0045065 3300039438 Bacteria 1106
180 Ga0436360_0355178 3300039438 Bacteria 1175
181 Ga0436360_1113089 3300039438 Bacteria 1228
182 Ga0436361_0171397 3300039447 Bacteria 5151
183 Ga0436361_0308504 3300039447 Bacteria 2163
184 Ga0436361_0700259 3300039447 Bacteria 9828
185 Ga0436361_0905437 3300039447 Unclassified 1774
186 Ga0436361_0987206 3300039447 Bacteria 6019
187 Ga0439448_0005187 3300042005 Bacteria 3709
188 Ga0466957_0003767 3300044842 Bacteria 8382
189 Ga0466967_0077257 3300045976 Bacteria 2997
190 Ga0466967_0164870 3300045976 Bacteria 2082
191 Ga0495603_0020778 3300046455 Bacteria 3975
192 Ga0495603_0250305 3300046455 Bacteria 1020
193 Ga0495651_0012435 3300046462 Bacteria 6565
194 Ga0495651_0012695 3300046462 Bacteria 6502
195 Ga0495651_0026037 3300046462 Bacteria 4555
196 Ga0495653_0120908 3300046463 Bacteria 1867
197 Ga0495650_0000029 3300046471 Bacteria 453466
198 Ga0495582_0022066 3300046473 Bacteria 3482
199 Ga0495662_0002704 3300046476 Bacteria 8963
200 Ga0495664_0023361 3300046477 Bacteria 3589
201 Ga0495585_0046585 3300046492 Bacteria 2418
202 Ga0495594_0002013 3300046499 Bacteria 10582
203 Ga0495594_0027631 3300046499 Bacteria 3058
204 Ga0495606_0094608 3300046507 Bacteria 1831
205 Ga0495628_0171706 3300046516 Bacteria 1644
206 Ga0495631_0210345 3300046518 Bacteria 831
207 Ga0495632_0142490 3300046519 Bacteria 1111
208 Ga0495644_0000316 3300046523 Bacteria 22262
209 Ga0495648_0223897 3300046524 Bacteria 926
210 Ga0495666_0014374 3300046526 Bacteria 3942
211 Ga0495642_0016923 3300046528 Bacteria 2846
212 Ga0495652_0139929 3300046529 Bacteria 1904
213 Ga0495640_0013650 3300046533 Bacteria 6173
214 Ga0495586_0017412 3300046535 Bacteria 3821
215 Ga0495587_0073261 3300046536 Bacteria 1990
216 Ga0495609_0056225 3300046538 Bacteria 1744
217 Ga0495645_0009322 3300046543 Bacteria 6867
218 Ga0495667_0046393 3300046559 Bacteria 2874
219 Ga0495634_0008386 3300046642 Bacteria 7700
220 Ga0495611_0056215 3300046648 Bacteria 1781
221 Ga0495625_0001024 3300046660 Bacteria 36797
222 Ga0495625_0036237 3300046660 Bacteria 3628
223 Ga0495625_0046120 3300046660 Bacteria 3146
224 Ga0495625_0108834 3300046660 Bacteria 1896
225 Ga0495635_0050071 3300046663 Bacteria 2879
226 Ga0495661_0049287 3300046665 Bacteria 2555
227 Ga0495661_0337270 3300046665 Bacteria 745
228 Ga0495623_0020682 3300046679 Bacteria 4254
229 Ga0495613_0081103 3300046689 Bacteria 2357
230 Ga0495613_0086731 3300046689 Bacteria 2269
231 Ga0495670_0010787 3300046691 Bacteria 4489
232 Ga0495600_0001535 3300046809 Bacteria 12828
233 Ga0495600_0059126 3300046809 Bacteria 2504
234 Ga0495581_0200784 3300047315 Bacteria 1166
235 Ga0495581_0323083 3300047315 Bacteria 901
236 Ga0495604_0014550 3300047317 Bacteria 6275
237 Ga0495604_0038748 3300047317 Bacteria 3750
238 Ga0495604_0066723 3300047317 Bacteria 2736
239 Ga0495674_0060644 3300047319 Bacteria 3300
240 Ga0495672_0065596 3300047320 Bacteria 2075
241 Ga0495676_0039187 3300047321 Bacteria 3927
242 Ga0495686_0003931 3300047472 Bacteria 12503
243 Ga0495686_0008736 3300047472 Bacteria 7391
244 Ga0495686_0051104 3300047472 Bacteria 2595
245 Ga0495686_0119998 3300047472 Unclassified 1569
246 Ga0495602_0168518 3300048088 Bacteria 1702
247 Ga0496104_0153175 3300048907 Unclassified 2212
248 Ga0496104_0276125 3300048907 Bacteria 1593
249 Ga0496105_0103336 3300048908 Bacteria 2353
250 Ga0496105_0349204 3300048908 Bacteria 1182
251 Ga0496126_0000191 3300048929 Bacteria 137108
252 Ga0496126_0001093 3300048929 Bacteria 45526
253 Ga0496126_0074525 3300048929 Bacteria 3014
254 Ga0495682_0073309 3300049460 Bacteria 1232
255 Ga0501032_0002834 3300049569 Bacteria 13488
256 Ga0501033_0027069 3300049570 Bacteria 4313
257 Ga0501033_0259686 3300049570 Bacteria 1230
258 Ga0501034_0004264 3300049571 Bacteria 15952
259 Ga0501036_0011574 3300049572 Bacteria 7310
260 Ga0501037_0001771 3300049573 Bacteria 15679
261 Ga0501038_0000845 3300049574 Bacteria 27143
262 Ga0501038_0458621 3300049574 Bacteria 979
263 Ga0501039_0164091 3300049575 Bacteria 1747
264 Ga0501043_0002287 3300049579 Bacteria 16248
265 Ga0501046_0004323 3300049580 Bacteria 12931
266 Ga0501047_0001407 3300049581 Bacteria 23589
267 Ga0501068_0231067 3300049584 Bacteria 1176
268 Ga0501073_0007303 3300049589 Bacteria 8225
269 Ga0501080_0173878 3300049742 Bacteria 1985
270 Ga0501080_0178925 3300049742 Bacteria 1952
271 Ga0501035_0005515 3300049822 Bacteria 11956
272 Ga0501035_0161894 3300049822 Bacteria 1936
273 Ga0501044_0002709 3300049823 Bacteria 20135
274 Ga0501044_0422003 3300049823 Bacteria 1244
275 Ga0495601_0008096 3300053077 Bacteria 6196
276 Ga0500651_0000008 3300053093 Bacteria 287738
277 Ga0500595_000187 3300053119 Bacteria 42083
278 Ga0500595_039860 3300053119 Bacteria 1518

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025949 Ga0207667_10501158 Ga0207667_105011582 175
2 3300005439 Ga0070711_100024617 Ga0070711_1000246173 187
3 3300009098 Ga0105245_10670799 Ga0105245_106707991 190
4 3300005339 Ga0070660_100014364 Ga0070660_1000143646 192
5 3300005366 Ga0070659_100124428 Ga0070659_1001244283 192
6 3300025919 Ga0207657_10001844 Ga0207657_100018443 192
7 3300025949 Ga0207667_10612940 Ga0207667_106129401 192
8 3300046455 Ga0495603_0250305 Ga0495603_0250305_308_982 192
9 3300046473 Ga0495582_0022066 Ga0495582_0022066_2220_2894 192
10 3300046499 Ga0495594_0027631 Ga0495594_0027631_105_779 192
11 3300046689 Ga0495613_0081103 Ga0495613_0081103_759_1433 192
12 3300047315 Ga0495581_0200784 Ga0495581_0200784_80_754 192
13 3300005458 Ga0070681_10040779 Ga0070681_100407792 193
14 3300005563 Ga0068855_100487961 Ga0068855_1004879612 193
15 3300005563 Ga0068855_100619558 Ga0068855_1006195582 193
16 3300005578 Ga0068854_100186943 Ga0068854_1001869431 193
17 3300009093 Ga0105240_10014142 Ga0105240_100141422 193
18 3300009545 Ga0105237_10012226 Ga0105237_100122268 193
19 3300013102 Ga0157371_10169546 Ga0157371_101695462 193
20 3300013104 Ga0157370_10268975 Ga0157370_102689752 193
21 3300013105 Ga0157369_10257238 Ga0157369_102572382 193
22 3300025909 Ga0207705_10004909 Ga0207705_100049093 193
23 3300025913 Ga0207695_10043943 Ga0207695_100439432 193
24 3300025917 Ga0207660_10019212 Ga0207660_100192123 193
25 3300025944 Ga0207661_10010698 Ga0207661_100106986 193
26 3300025981 Ga0207640_10031470 Ga0207640_100314703 193
27 3300026041 Ga0207639_10021322 Ga0207639_100213222 193
28 3300026067 Ga0207678_10003233 Ga0207678_1000323311 193
29 3300026116 Ga0207674_10001311 Ga0207674_100013112 193
30 3300049742 Ga0501080_0173878 Ga0501080_0173878_823_1545 193
31 3300049823 Ga0501044_0422003 Ga0501044_0422003_475_1197 193
32 3300046455 Ga0495603_0020778 Ga0495603_0020778_1184_1858 195
33 3300046492 Ga0495585_0046585 Ga0495585_0046585_767_1441 195
34 3300046523 Ga0495644_0000316 Ga0495644_0000316_14547_15221 195
35 3300046528 Ga0495642_0016923 Ga0495642_0016923_622_1296 195
36 3300046648 Ga0495611_0056215 Ga0495611_0056215_1074_1748 195
37 3300046660 Ga0495625_0046120 Ga0495625_0046120_1064_1738 195
38 3300046665 Ga0495661_0337270 Ga0495661_0337270_46_720 195
39 3300046691 Ga0495670_0010787 Ga0495670_0010787_1620_2294 195
40 3300005339 Ga0070660_100042646 Ga0070660_1000426462 197
41 3300005366 Ga0070659_100001877 Ga0070659_1000018775 197
42 3300005455 Ga0070663_100049405 Ga0070663_1000494053 197
43 3300005578 Ga0068854_100000016 Ga0068854_10000001694 197
44 3300009093 Ga0105240_10010440 Ga0105240_1001044010 197
45 3300013104 Ga0157370_10008248 Ga0157370_1000824810 197
46 3300013105 Ga0157369_10301978 Ga0157369_103019782 197
47 3300025913 Ga0207695_10016630 Ga0207695_100166305 197
48 3300025919 Ga0207657_10001860 Ga0207657_1000186010 197
49 3300025932 Ga0207690_10001967 Ga0207690_100019674 197
50 3300025981 Ga0207640_10000001 Ga0207640_10000001314 197
51 3300026067 Ga0207678_10025377 Ga0207678_100253774 197
52 3300046660 Ga0495625_0001024 Ga0495625_0001024_4709_5383 197
53 3300049570 Ga0501033_0259686 Ga0501033_0259686_157_819 197
54 iso_pu_bacteria 2884215851 2884216957 197
55 3300005347 Ga0070668_100113751 Ga0070668_1001137512 198
56 3300025972 Ga0207668_10450867 Ga0207668_104508671 198
57 3300005327 Ga0070658_10058743 Ga0070658_100587432 199
58 3300025909 Ga0207705_10082345 Ga0207705_100823451 199
59 3300047472 Ga0495686_0008736 Ga0495686_0008736_983_1645 199
60 3300053119 Ga0500595_039860 Ga0500595_039860_127_801 199
61 3300005614 Ga0068856_100209694 Ga0068856_1002096944 200
62 3300005842 Ga0068858_100172357 Ga0068858_1001723572 200
63 3300005983 Ga0081540_1009299 Ga0081540_10092995 200
64 3300009551 Ga0105238_10003571 Ga0105238_1000357112 200
65 3300009553 Ga0105249_10027220 Ga0105249_100272204 200
66 3300014968 Ga0157379_10368795 Ga0157379_103687952 200
67 3300025961 Ga0207712_10060293 Ga0207712_100602933 200
68 3300026035 Ga0207703_10122915 Ga0207703_101229152 200
69 3300026078 Ga0207702_10388900 Ga0207702_103889002 200
70 3300039447 Ga0436361_0987206 Ga0436361_0987206_2770_3426 200
71 3300005327 Ga0070658_10000004 Ga0070658_10000004165 201
72 3300005327 Ga0070658_10020924 Ga0070658_100209246 201
73 3300005327 Ga0070658_10031393 Ga0070658_100313934 201
74 3300005327 Ga0070658_10335107 Ga0070658_103351072 201
75 3300005331 Ga0070670_100407337 Ga0070670_1004073372 201
76 3300005335 Ga0070666_10156653 Ga0070666_101566532 201
77 3300005337 Ga0070682_100092296 Ga0070682_1000922962 201
78 3300005337 Ga0070682_100599088 Ga0070682_1005990881 201
79 3300005339 Ga0070660_100040185 Ga0070660_1000401855 201
80 3300005355 Ga0070671_100003603 Ga0070671_10000360312 201
81 3300005367 Ga0070667_101196195 Ga0070667_1011961951 201
82 3300005435 Ga0070714_100089703 Ga0070714_1000897034 201
83 3300005455 Ga0070663_100722800 Ga0070663_1007228001 201
84 3300005530 Ga0070679_100249093 Ga0070679_1002490932 201
85 3300005539 Ga0068853_100000244 Ga0068853_10000024419 201
86 3300005548 Ga0070665_100033876 Ga0070665_1000338766 201
87 3300005563 Ga0068855_100009618 Ga0068855_1000096189 201
88 3300005563 Ga0068855_100062699 Ga0068855_1000626996 201
89 3300005563 Ga0068855_100120535 Ga0068855_1001205353 201
90 3300005614 Ga0068856_100432717 Ga0068856_1004327172 201
91 3300005614 Ga0068856_100609760 Ga0068856_1006097601 201
92 3300005616 Ga0068852_100108755 Ga0068852_1001087552 201
93 3300005616 Ga0068852_100146741 Ga0068852_1001467411 201
94 3300005616 Ga0068852_100618801 Ga0068852_1006188011 201
95 3300005618 Ga0068864_100016174 Ga0068864_1000161742 201
96 3300005841 Ga0068863_100137128 Ga0068863_1001371282 201
97 3300009093 Ga0105240_10003749 Ga0105240_1000374918 201
98 3300009093 Ga0105240_10138805 Ga0105240_101388052 201
99 3300009093 Ga0105240_10216513 Ga0105240_102165132 201
100 3300009093 Ga0105240_11064548 Ga0105240_110645482 201
101 3300009093 Ga0105240_11168128 Ga0105240_111681281 201
102 3300009174 Ga0105241_10211492 Ga0105241_102114922 201
103 3300009177 Ga0105248_10024142 Ga0105248_100241422 201
104 3300009177 Ga0105248_10618609 Ga0105248_106186092 201
105 3300009551 Ga0105238_10025241 Ga0105238_100252415 201
106 3300009551 Ga0105238_10071096 Ga0105238_100710965 201
107 3300013104 Ga0157370_10075793 Ga0157370_100757935 201
108 3300013104 Ga0157370_10122620 Ga0157370_101226202 201
109 3300013104 Ga0157370_10143390 Ga0157370_101433904 201
110 3300013104 Ga0157370_10207291 Ga0157370_102072912 201
111 3300013105 Ga0157369_10018800 Ga0157369_100188003 201
112 3300013105 Ga0157369_10050551 Ga0157369_100505512 201
113 3300013105 Ga0157369_10053117 Ga0157369_100531172 201
114 3300013105 Ga0157369_10132444 Ga0157369_101324441 201
115 3300013105 Ga0157369_10443102 Ga0157369_104431021 201
116 3300013296 Ga0157374_10060686 Ga0157374_100606863 201
117 3300013296 Ga0157374_10180739 Ga0157374_101807391 201
118 3300013307 Ga0157372_10027868 Ga0157372_100278686 201
119 3300013307 Ga0157372_10063006 Ga0157372_100630063 201
120 3300013307 Ga0157372_10467585 Ga0157372_104675852 201
121 3300014325 Ga0163163_10244688 Ga0163163_102446882 201
122 3300021361 Ga0213872_10100218 Ga0213872_101002182 201
123 3300025903 Ga0207680_10133489 Ga0207680_101334892 201
124 3300025909 Ga0207705_10000024 Ga0207705_10000024145 201
125 3300025909 Ga0207705_10003519 Ga0207705_100035196 201
126 3300025909 Ga0207705_10277991 Ga0207705_102779911 201
127 3300025909 Ga0207705_10417944 Ga0207705_104179442 201
128 3300025909 Ga0207705_10655792 Ga0207705_106557921 201
129 3300025913 Ga0207695_10000002 Ga0207695_100000021100 201
130 3300025913 Ga0207695_10000532 Ga0207695_1000053221 201
131 3300025913 Ga0207695_10295137 Ga0207695_102951371 201
132 3300025917 Ga0207660_10538516 Ga0207660_105385161 201
133 3300025919 Ga0207657_10139273 Ga0207657_101392732 201
134 3300025920 Ga0207649_10227920 Ga0207649_102279202 201
135 3300025924 Ga0207694_10476859 Ga0207694_104768592 201
136 3300025924 Ga0207694_10535610 Ga0207694_105356101 201
137 3300025929 Ga0207664_10154686 Ga0207664_101546863 201
138 3300025929 Ga0207664_10387274 Ga0207664_103872742 201
139 3300025931 Ga0207644_10085378 Ga0207644_100853782 201
140 3300025941 Ga0207711_10047180 Ga0207711_100471802 201
141 3300025949 Ga0207667_10001884 Ga0207667_1000188419 201
142 3300025949 Ga0207667_10041585 Ga0207667_100415851 201
143 3300025949 Ga0207667_10084598 Ga0207667_100845984 201
144 3300025949 Ga0207667_10229274 Ga0207667_102292741 201
145 3300025949 Ga0207667_10242482 Ga0207667_102424823 201
146 3300025949 Ga0207667_10342675 Ga0207667_103426752 201
147 3300026041 Ga0207639_10000261 Ga0207639_1000026117 201
148 3300026067 Ga0207678_10051659 Ga0207678_100516593 201
149 3300026067 Ga0207678_10109797 Ga0207678_101097972 201
150 3300026078 Ga0207702_10043519 Ga0207702_100435192 201
151 3300026078 Ga0207702_10225310 Ga0207702_102253103 201
152 3300026078 Ga0207702_10405461 Ga0207702_104054612 201
153 3300026095 Ga0207676_10054800 Ga0207676_100548004 201
154 3300026116 Ga0207674_10356868 Ga0207674_103568682 201
155 3300026142 Ga0207698_10029083 Ga0207698_100290834 201
156 3300026142 Ga0207698_10237417 Ga0207698_102374173 201
157 3300028379 Ga0268266_10001615 Ga0268266_100016156 201
158 3300028379 Ga0268266_10001974 Ga0268266_100019748 201
159 3300028379 Ga0268266_10090070 Ga0268266_100900702 201
160 3300028666 Ga0265336_10005629 Ga0265336_100056292 201
161 3300028800 Ga0265338_10006729 Ga0265338_100067297 201
162 3300029957 Ga0265324_10023807 Ga0265324_100238073 201
163 3300031238 Ga0265332_10077814 Ga0265332_100778142 201
164 3300031239 Ga0265328_10032484 Ga0265328_100324842 201
165 3300031239 Ga0265328_10032508 Ga0265328_100325082 201
166 3300031249 Ga0265339_10000580 Ga0265339_1000058026 201
167 3300031344 Ga0265316_10015671 Ga0265316_100156714 201
168 3300031344 Ga0265316_10065403 Ga0265316_100654033 201
169 3300031711 Ga0265314_10004060 Ga0265314_100040607 201
170 3300033180 Ga0307510_10075439 Ga0307510_100754392 201
171 3300033180 Ga0307510_10131155 Ga0307510_101311552 201
172 3300033180 Ga0307510_10236390 Ga0307510_102363902 201
173 3300036401 Ga0373937_0308413 Ga0373937_0308413_239_925 201
174 3300039438 Ga0436360_0355178 Ga0436360_0355178_107_763 201
175 3300039438 Ga0436360_1113089 Ga0436360_1113089_236_901 201
176 3300039447 Ga0436361_0171397 Ga0436361_0171397_4148_4813 201
177 3300042005 Ga0439448_0005187 Ga0439448_0005187_2467_3153 201
178 3300045976 Ga0466967_0077257 Ga0466967_0077257_431_1111 201
179 3300045976 Ga0466967_0164870 Ga0466967_0164870_791_1459 201
180 3300046462 Ga0495651_0026037 Ga0495651_0026037_1482_2168 201
181 3300046463 Ga0495653_0120908 Ga0495653_0120908_170_844 201
182 3300046471 Ga0495650_0000029 Ga0495650_0000029_129805_130479 201
183 3300046476 Ga0495662_0002704 Ga0495662_0002704_6981_7655 201
184 3300046499 Ga0495594_0002013 Ga0495594_0002013_9767_10441 201
185 3300046507 Ga0495606_0094608 Ga0495606_0094608_818_1492 201
186 3300046516 Ga0495628_0171706 Ga0495628_0171706_293_979 201
187 3300046518 Ga0495631_0210345 Ga0495631_0210345_85_759 201
188 3300046519 Ga0495632_0142490 Ga0495632_0142490_28_702 201
189 3300046524 Ga0495648_0223897 Ga0495648_0223897_19_693 201
190 3300046526 Ga0495666_0014374 Ga0495666_0014374_35_709 201
191 3300046529 Ga0495652_0139929 Ga0495652_0139929_548_1234 201
192 3300046533 Ga0495640_0013650 Ga0495640_0013650_58_732 201
193 3300046535 Ga0495586_0017412 Ga0495586_0017412_1988_2662 201
194 3300046536 Ga0495587_0073261 Ga0495587_0073261_184_858 201
195 3300046538 Ga0495609_0056225 Ga0495609_0056225_411_1085 201
196 3300046543 Ga0495645_0009322 Ga0495645_0009322_1759_2445 201
197 3300046559 Ga0495667_0046393 Ga0495667_0046393_594_1268 201
198 3300046642 Ga0495634_0008386 Ga0495634_0008386_3054_3728 201
199 3300046660 Ga0495625_0036237 Ga0495625_0036237_1539_2216 201
200 3300046660 Ga0495625_0108834 Ga0495625_0108834_30_704 201
201 3300046663 Ga0495635_0050071 Ga0495635_0050071_1546_2220 201
202 3300046665 Ga0495661_0049287 Ga0495661_0049287_1088_1768 201
203 3300046679 Ga0495623_0020682 Ga0495623_0020682_2840_3514 201
204 3300046689 Ga0495613_0086731 Ga0495613_0086731_1085_1759 201
205 3300046809 Ga0495600_0001535 Ga0495600_0001535_6902_7576 201
206 3300046809 Ga0495600_0059126 Ga0495600_0059126_1593_2279 201
207 3300047315 Ga0495581_0323083 Ga0495581_0323083_170_844 201
208 3300047317 Ga0495604_0014550 Ga0495604_0014550_477_1163 201
209 3300047317 Ga0495604_0038748 Ga0495604_0038748_969_1643 201
210 3300047320 Ga0495672_0065596 Ga0495672_0065596_674_1348 201
211 3300047321 Ga0495676_0039187 Ga0495676_0039187_996_1670 201
212 3300047472 Ga0495686_0003931 Ga0495686_0003931_2990_3670 201
213 3300047472 Ga0495686_0051104 Ga0495686_0051104_1764_2438 201
214 3300048088 Ga0495602_0168518 Ga0495602_0168518_28_714 201
215 3300048929 Ga0496126_0001093 Ga0496126_0001093_33826_34503 201
216 3300048929 Ga0496126_0074525 Ga0496126_0074525_2144_2818 201
217 3300049460 Ga0495682_0073309 Ga0495682_0073309_299_973 201
218 3300049569 Ga0501032_0002834 Ga0501032_0002834_4944_5618 201
219 3300049570 Ga0501033_0027069 Ga0501033_0027069_1353_2027 201
220 3300049571 Ga0501034_0004264 Ga0501034_0004264_5393_6067 201
221 3300049572 Ga0501036_0011574 Ga0501036_0011574_2271_2945 201
222 3300049573 Ga0501037_0001771 Ga0501037_0001771_4171_4845 201
223 3300049574 Ga0501038_0000845 Ga0501038_0000845_9994_10668 201
224 3300049574 Ga0501038_0458621 Ga0501038_0458621_79_753 201
225 3300049579 Ga0501043_0002287 Ga0501043_0002287_4395_5069 201
226 3300049580 Ga0501046_0004323 Ga0501046_0004323_9173_9847 201
227 3300049581 Ga0501047_0001407 Ga0501047_0001407_7931_8605 201
228 3300049584 Ga0501068_0231067 Ga0501068_0231067_132_806 201
229 3300049589 Ga0501073_0007303 Ga0501073_0007303_997_1671 201
230 3300049742 Ga0501080_0178925 Ga0501080_0178925_575_1249 201
231 3300049822 Ga0501035_0005515 Ga0501035_0005515_579_1253 201
232 3300049823 Ga0501044_0002709 Ga0501044_0002709_1353_2027 201
233 3300053093 Ga0500651_0000008 Ga0500651_0000008_125933_126613 201
234 3300053119 Ga0500595_000187 Ga0500595_000187_25513_26187 201
235 3300009093 Ga0105240_10292223 Ga0105240_102922232 202
236 3300021361 Ga0213872_10003161 Ga0213872_100031612 202
237 3300021361 Ga0213872_10010773 Ga0213872_100107732 202
238 3300025924 Ga0207694_10011356 Ga0207694_100113565 202
239 3300039438 Ga0436360_0045065 Ga0436360_0045065_64_732 202
240 3300039447 Ga0436361_0308504 Ga0436361_0308504_41_709 202
241 3300039447 Ga0436361_0700259 Ga0436361_0700259_943_1620 202
242 3300039447 Ga0436361_0905437 Ga0436361_0905437_59_727 202
243 3300053077 Ga0495601_0008096 Ga0495601_0008096_1365_2027 202
244 3300004803 Ga0058862_10013630 Ga0058862_100136301 203
245 3300005435 Ga0070714_100580262 Ga0070714_1005802621 203
246 3300005539 Ga0068853_100390961 Ga0068853_1003909612 203
247 3300005563 Ga0068855_100316334 Ga0068855_1003163343 203
248 3300005563 Ga0068855_100730198 Ga0068855_1007301982 203
249 3300006175 Ga0070712_100002824 Ga0070712_1000028249 203
250 3300006914 Ga0075436_100332918 Ga0075436_1003329181 203
251 3300009093 Ga0105240_10081810 Ga0105240_100818102 203
252 3300009177 Ga0105248_10030335 Ga0105248_100303354 203
253 3300009545 Ga0105237_10083523 Ga0105237_100835232 203
254 3300009545 Ga0105237_10296968 Ga0105237_102969682 203
255 3300013104 Ga0157370_10367850 Ga0157370_103678502 203
256 3300013306 Ga0163162_10000143 Ga0163162_100001432 203
257 3300014969 Ga0157376_10012947 Ga0157376_100129476 203
258 3300025261 Ga0209233_1003364 Ga0209233_10033646 203
259 3300025921 Ga0207652_10538839 Ga0207652_105388392 203
260 3300025929 Ga0207664_10325979 Ga0207664_103259792 203
261 3300025941 Ga0207711_10044376 Ga0207711_100443762 203
262 3300025949 Ga0207667_10387664 Ga0207667_103876641 203
263 3300025981 Ga0207640_10656969 Ga0207640_106569691 203
264 3300026142 Ga0207698_10080162 Ga0207698_100801623 203
265 3300036401 Ga0373937_0205267 Ga0373937_0205267_484_1152 203
266 3300044842 Ga0466957_0003767 Ga0466957_0003767_7556_8236 203
267 3300046462 Ga0495651_0012435 Ga0495651_0012435_4069_4737 203
268 3300046462 Ga0495651_0012695 Ga0495651_0012695_4453_5217 203
269 3300046477 Ga0495664_0023361 Ga0495664_0023361_557_1321 203
270 3300047317 Ga0495604_0066723 Ga0495604_0066723_819_1583 203
271 3300047319 Ga0495674_0060644 Ga0495674_0060644_477_1241 203
272 3300047472 Ga0495686_0119998 Ga0495686_0119998_522_1241 203
273 3300048907 Ga0496104_0153175 Ga0496104_0153175_1393_2136 203
274 3300048907 Ga0496104_0276125 Ga0496104_0276125_653_1417 203
275 3300048908 Ga0496105_0103336 Ga0496105_0103336_1040_1804 203
276 3300048908 Ga0496105_0349204 Ga0496105_0349204_252_959 203
277 3300048929 Ga0496126_0000191 Ga0496126_0000191_112678_113385 203
278 3300049575 Ga0501039_0164091 Ga0501039_0164091_454_1212 203
279 3300049822 Ga0501035_0161894 Ga0501035_0161894_571_1329 203

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02223

Thymidylate_kin

Thymidylate kinase

39

241

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8j-assembly1.cif.gz_A k16m mutant of thermus thermophilus hb8 thymidylate kinase 0.9142 6 198
5x8a-assembly1.cif.gz_B crystal structure of atp bound thymidylate kinase from thermus thermophilus hb8 0.9118 6 198
5x8d-assembly1.cif.gz_B d90l mutant of thermus thermophilus hb8 thymidylate kinase 0.9106 6 198
5xak-assembly1.cif.gz_A crystal structure (form ii) of thymidylate kinase from thermus thermophilus hb8 0.9089 6 198
5x7j-assembly1.cif.gz_A crystal structure of thymidylate kinase from thermus thermophilus hb8 0.9087 6 198
ID Description Score Start End Superfamily
2z0hB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8756 8 194 3.40.50.300
2yohA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8684 4 198 3.40.50.300
5x7jB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8669 6 200 3.40.50.300
2z0hB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8661 8 194 3.40.50.300
2pbrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8615 8 202 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A127FBL6-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.8954 1 202 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0A2W4RKQ9-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.8942 4 194 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-W9EDS7-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.8922 5 201 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0NIM1-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.891 4 200 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235
AF-A0A7V6HIC7-F1-model_v4 Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) 0.8908 5 199 GO:0004798
GO:0005524
GO:0005829
GO:0006227
GO:0006233
GO:0006235

Feature Viewer

pLDDT pTM Quality
89.78 0.87 High
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Predicted Structure (AlphaFold2)

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