F382987

General Info

Members Datasets Scaffolds Average Seq Length
279 158 558 499

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100133099|Ga0075434_1001330992
Length 521
Sequence MTSDPILRLRFAPSPTGQIHVGNARTALFNWLMARGTGATFVLRVEDTDFARSTKEAEASALDDLRWLGLNWDEGPDAGGAHGPYRQSERLHIYRAHAVELMSRGQAYHCFCSEEQLEMDRYHALRNMQPPKYVGRCRNISADEARRRIEAGEPAAIRFRVPDGDREVAFEDLVRGRVSFMTDVIGDFVLVRSGGVPAYNFAVVIDDALMEISHVVRGEDHISNTPRQLLLYEAFGWTPPRFGHVSMVLGPDHSKLSKRHGATSVGEFRERGYLPEAFANYLALLGWSPGDNEELLPLEELARRFRIEDVGKSAGVFDPEKLAWVNRHYLKLASSERLTELTLPFLQREGWIAPSDFDRDSGRLGFGDPRARGFVMHAIATAAQSIDRLDQAAARLHFLFDYSAARAIGNPAIRAEAAGARGVIAALAEETARAGRLVDKESFRALAARIRQQTGAKGKALFHPIRLALTGEAEGLELDLAVPLIEEGAALPSSSAVRPIFGVADRAAAFLHELEKPGVDA

Samples

Sample ID Description Type Environment
1 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
112 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
113 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
155 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.23
Rhizosphere 96.06
Stem 0
Stem Tuber 0
Unclassified 3.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075434_100133099 3300006871 Bacteria 2506
2 JGI25406J46586_10003939 3300003203 Bacteria 6941
3 JGI25406J46586_10004873 3300003203 Bacteria 6238
4 Ga0065704_10076171 3300005289 Bacteria 5228
5 Ga0065707_10000901 3300005295 Bacteria 9894
6 Ga0070676_10034772 3300005328 Bacteria 2894
7 Ga0070683_100000094 3300005329 Bacteria 58242
8 Ga0070670_100018452 3300005331 Bacteria 5986
9 Ga0070670_100027710 3300005331 Bacteria 4873
10 Ga0070670_100027757 3300005331 Bacteria 4869
11 Ga0070670_100046401 3300005331 Bacteria 3736
12 Ga0070670_100123724 3300005331 Bacteria 2232
13 Ga0070689_100019127 3300005340 Bacteria 5059
14 Ga0070689_100068010 3300005340 Bacteria 2777
15 Ga0070692_10007847 3300005345 Bacteria 4730
16 Ga0070669_100001822 3300005353 Bacteria 15344
17 Ga0070669_100011205 3300005353 Bacteria 6363
18 Ga0070675_100000449 3300005354 Bacteria 28086
19 Ga0070675_100027150 3300005354 Bacteria 4598
20 Ga0070675_100124370 3300005354 Bacteria 2193
21 Ga0070671_100006444 3300005355 Bacteria 9382
22 Ga0070671_100039024 3300005355 Bacteria 3942
23 Ga0070674_100015819 3300005356 Bacteria 4718
24 Ga0070673_100009823 3300005364 Bacteria 6445
25 Ga0070673_100012525 3300005364 Bacteria 5826
26 Ga0070688_100004028 3300005365 Bacteria 7622
27 Ga0070667_100022990 3300005367 Bacteria 5169
28 Ga0070667_100048553 3300005367 Bacteria 3573
29 Ga0070713_100050907 3300005436 Bacteria 3423
30 Ga0070701_10017863 3300005438 Bacteria 3323
31 Ga0070705_100000175 3300005440 Bacteria 37567
32 Ga0070705_100016927 3300005440 Bacteria 3797
33 Ga0070705_100018084 3300005440 Bacteria 3688
34 Ga0070705_100024253 3300005440 Bacteria 3271
35 Ga0070700_100033404 3300005441 Bacteria 3098
36 Ga0070694_100018208 3300005444 Bacteria 4456
37 Ga0070694_100026117 3300005444 Bacteria 3782
38 Ga0070663_100008778 3300005455 Bacteria 6234
39 Ga0070681_10051979 3300005458 Bacteria 4086
40 Ga0068867_100015869 3300005459 Bacteria 5346
41 Ga0070685_10057766 3300005466 Bacteria 2259
42 Ga0070707_100140781 3300005468 Bacteria 2348
43 Ga0070698_100005848 3300005471 Bacteria 13445
44 Ga0070698_100029734 3300005471 Bacteria 5670
45 Ga0070699_100016246 3300005518 Bacteria 6391
46 Ga0070699_100019895 3300005518 Bacteria 5786
47 Ga0070679_100145532 3300005530 Bacteria 2348
48 Ga0070684_100006365 3300005535 Bacteria 9130
49 Ga0070684_100047468 3300005535 Bacteria 3721
50 Ga0070697_100084617 3300005536 Bacteria 2616
51 Ga0070672_100036831 3300005543 Bacteria 3730
52 Ga0070672_100115192 3300005543 Bacteria 2195
53 Ga0070695_100000031 3300005545 Bacteria 53175
54 Ga0070695_100011528 3300005545 Bacteria 5287
55 Ga0070696_100000952 3300005546 Bacteria 18789
56 Ga0070696_100023701 3300005546 Bacteria 4172
57 Ga0070696_100041441 3300005546 Bacteria 3181
58 Ga0070704_100012497 3300005549 Bacteria 5244
59 Ga0070704_100031595 3300005549 Bacteria 3564
60 Ga0070664_100000479 3300005564 Bacteria 30222
61 Ga0070664_100064565 3300005564 Bacteria 3123
62 Ga0068857_100152592 3300005577 Unclassified 2094
63 Ga0068854_100026719 3300005578 Bacteria 3970
64 Ga0070702_100080057 3300005615 Bacteria 1954
65 Ga0068859_100007314 3300005617 Bacteria 11196
66 Ga0068859_100153402 3300005617 Unclassified 2380
67 Ga0068864_100019195 3300005618 Bacteria 5714
68 Ga0068864_100020648 3300005618 Bacteria 5511
69 Ga0068864_100064321 3300005618 Bacteria 3181
70 Ga0068861_100020496 3300005719 Bacteria 4738
71 Ga0068870_10027008 3300005840 Bacteria 2868
72 Ga0068862_100003872 3300005844 Bacteria 12736
73 Ga0068862_100005534 3300005844 Bacteria 10552
74 Ga0068862_100065201 3300005844 Bacteria 3137
75 Ga0081539_10001531 3300005985 Bacteria 38711
76 Ga0081539_10004143 3300005985 Bacteria 16485
77 Ga0068871_100097360 3300006358 Bacteria 2459
78 Ga0075428_100002974 3300006844 Bacteria 18470
79 Ga0075428_100005429 3300006844 Bacteria 14163
80 Ga0075428_100006407 3300006844 Bacteria 13096
81 Ga0075428_100018349 3300006844 Bacteria 7734
82 Ga0075428_100305953 3300006844 Bacteria 1709
83 Ga0075430_100017589 3300006846 Bacteria 6087
84 Ga0075431_100030556 3300006847 Bacteria 5550
85 Ga0075433_10030452 3300006852 Bacteria 4604
86 Ga0075433_10111395 3300006852 Bacteria 2428
87 Ga0075434_100006826 3300006871 Bacteria 10504
88 Ga0075434_100008089 3300006871 Bacteria 9751
89 Ga0075434_100074431 3300006871 Bacteria 3389
90 Ga0075434_100104337 3300006871 Bacteria 2844
91 Ga0075429_100069596 3300006880 Bacteria 3064
92 Ga0075429_100079616 3300006880 Bacteria 2856
93 Ga0097620_100007314 3300006931 Bacteria 11196
94 Ga0097620_100153402 3300006931 Unclassified 2380
95 Ga0075435_100009945 3300007076 Bacteria 6927
96 Ga0075435_100019196 3300007076 Bacteria 5215
97 Ga0075435_100023529 3300007076 Bacteria 4767
98 Ga0075435_100127175 3300007076 Bacteria 2130
99 Ga0075435_100213212 3300007076 Bacteria 1639
100 Ga0111539_10007496 3300009094 Bacteria 13967
101 Ga0111539_10008659 3300009094 Bacteria 12914
102 Ga0111539_10031704 3300009094 Bacteria 6420
103 Ga0111539_10041292 3300009094 Bacteria 5547
104 Ga0111539_10063460 3300009094 Bacteria 4372
105 Ga0111539_10094850 3300009094 Bacteria 3506
106 Ga0111539_10099441 3300009094 Bacteria 3416
107 Ga0111539_10197216 3300009094 Bacteria 2348
108 Ga0114129_10000509 3300009147 Bacteria 47512
109 Ga0114129_10004448 3300009147 Bacteria 19780
110 Ga0114129_10070092 3300009147 Bacteria 4888
111 Ga0114129_10082441 3300009147 Bacteria 4469
112 Ga0114129_10092728 3300009147 Bacteria 4184
113 Ga0114129_10104379 3300009147 Bacteria 3916
114 Ga0105243_10021101 3300009148 Bacteria 4943
115 Ga0105243_10078289 3300009148 Bacteria 2691
116 Ga0105248_10025846 3300009177 Bacteria 6530
117 Ga0105248_10133992 3300009177 Bacteria 2795
118 Ga0105249_10019967 3300009553 Bacteria 5983
119 Ga0105249_10161279 3300009553 Bacteria 2167
120 Ga0105239_10144288 3300010375 Bacteria 2654
121 Ga0157374_10100575 3300013296 Bacteria 2771
122 Ga0157378_10081034 3300013297 Bacteria 2933
123 Ga0163162_10027609 3300013306 Bacteria 5613
124 Ga0157375_10066390 3300013308 Bacteria 3602
125 Ga0157375_10213776 3300013308 Bacteria 2086
126 Ga0157380_10016512 3300014326 Bacteria 5446
127 Ga0157380_10087918 3300014326 Bacteria 2556
128 Ga0157376_10122095 3300014969 Bacteria 2310
129 Ga0207643_10008506 3300025908 Bacteria 5505
130 Ga0207650_10011879 3300025925 Bacteria 6000
131 Ga0207650_10023094 3300025925 Bacteria 4410
132 Ga0207659_10000377 3300025926 Bacteria 26919
133 Ga0207659_10008692 3300025926 Bacteria 6318
134 Ga0207644_10008400 3300025931 Bacteria 6757
135 Ga0207706_10024380 3300025933 Bacteria 5423
136 Ga0207706_10047583 3300025933 Bacteria 3794
137 Ga0207706_10163055 3300025933 Unclassified 1959
138 Ga0207709_10023007 3300025935 Bacteria 3542
139 Ga0207709_10042129 3300025935 Bacteria 2744
140 Ga0207670_10009097 3300025936 Bacteria 5644
141 Ga0207670_10023659 3300025936 Bacteria 3828
142 Ga0207669_10103296 3300025937 Bacteria 1890
143 Ga0207691_10005509 3300025940 Bacteria 12231
144 Ga0207691_10043783 3300025940 Bacteria 4124
145 Ga0207691_10052899 3300025940 Bacteria 3708
146 Ga0207691_10057311 3300025940 Bacteria 3546
147 Ga0207711_10078149 3300025941 Bacteria 2886
148 Ga0207661_10004428 3300025944 Bacteria 9857
149 Ga0207679_10027949 3300025945 Bacteria 3908
150 Ga0207679_10029717 3300025945 Bacteria 3807
151 Ga0207679_10034965 3300025945 Bacteria 3551
152 Ga0207679_10130891 3300025945 Bacteria 2013
153 Ga0207651_10053456 3300025960 Bacteria 2761
154 Ga0207651_10097664 3300025960 Bacteria 2169
155 Ga0207668_10023113 3300025972 Bacteria 3991
156 Ga0207658_10110636 3300025986 Bacteria 2171
157 Ga0207703_10036387 3300026035 Bacteria 3918
158 Ga0207678_10024257 3300026067 Bacteria 5297
159 Ga0207708_10013816 3300026075 Bacteria 6036
160 Ga0207708_10023752 3300026075 Bacteria 4635
161 Ga0207648_10006114 3300026089 Bacteria 12004
162 Ga0207648_10024611 3300026089 Bacteria 5371
163 Ga0207676_10016263 3300026095 Bacteria 5386
164 Ga0207674_10032657 3300026116 Bacteria 5457
165 Ga0207675_100000725 3300026118 Bacteria 32713
166 Ga0207683_10057039 3300026121 Bacteria 3428
167 Ga0207428_10001989 3300027907 Bacteria 20731
168 Ga0207428_10002947 3300027907 Bacteria 16839
169 Ga0207428_10004630 3300027907 Bacteria 13038
170 Ga0207428_10020107 3300027907 Bacteria 5680
171 Ga0268265_10000160 3300028380 Bacteria 81960
172 Ga0268265_10005894 3300028380 Bacteria 8350
173 Ga0307511_10000260 3300030521 Bacteria 54540
174 Ga0307511_10008474 3300030521 Bacteria 10284
175 Ga0265332_10046814 3300031238 Bacteria 1862
176 Ga0265339_10000279 3300031249 Bacteria 41139
177 Ga0307408_100031506 3300031548 Bacteria 3692
178 Ga0307408_100040341 3300031548 Bacteria 3305
179 Ga0265314_10000343 3300031711 Bacteria 64980
180 Ga0265342_10011797 3300031712 Bacteria 5956
181 Ga0307405_10037943 3300031731 Bacteria 2900
182 Ga0307413_10028722 3300031824 Bacteria 3102
183 Ga0307413_10049101 3300031824 Bacteria 2527
184 Ga0307410_10099652 3300031852 Bacteria 2080
185 Ga0307407_10026601 3300031903 Bacteria 3066
186 Ga0307409_100050194 3300031995 Bacteria 3185
187 Ga0307409_100135327 3300031995 Bacteria 2113
188 Ga0307416_100044438 3300032002 Bacteria 3488
189 Ga0307414_10025579 3300032004 Bacteria 3784
190 Ga0307414_10064708 3300032004 Bacteria 2605
191 Ga0307411_10034021 3300032005 Bacteria 3167
192 Ga0307411_10042933 3300032005 Bacteria 2890
193 Ga0307411_10059334 3300032005 Bacteria 2536
194 Ga0307415_100022048 3300032126 Bacteria 3925
195 Ga0307415_100033359 3300032126 Bacteria 3342
196 Ga0373936_0005851 3300035113 Bacteria 4632
197 Ga0373936_0015500 3300035113 Unclassified 2921
198 Ga0373937_0043758 3300036401 Bacteria 4089
199 Ga0451577_0094388 3300042876 Bacteria 2671
200 Ga0466960_0030642 3300044901 Bacteria 2477
201 Ga0451576_0020758 3300045051 Bacteria 7150
202 Ga0451576_0065765 3300045051 Bacteria 3774
203 Ga0495603_0028612 3300046455 Unclassified 3362
204 Ga0495642_0033671 3300046528 Bacteria 2060
205 Ga0495621_0014476 3300046539 Bacteria 2497
206 Ga0495633_0019290 3300046558 Unclassified 3450
207 Ga0495659_0005991 3300046664 Bacteria 3844
208 Ga0495659_0019774 3300046664 Bacteria 2255
209 Ga0495669_0029707 3300046684 Bacteria 2398
210 Ga0495669_0042424 3300046684 Unclassified 2023
211 Ga0495636_0001231 3300047318 Bacteria 9684
212 Ga0495674_0088293 3300047319 Bacteria 2652
213 Ga0495677_0007841 3300047445 Bacteria 3975
214 Ga0496102_0133487 3300048905 Unclassified 2325
215 Ga0496103_0027362 3300048906 Bacteria 3455
216 Ga0496106_0078483 3300048909 Bacteria 2534
217 Ga0496108_0026415 3300048911 Bacteria 4788
218 Ga0496109_0000869 3300048912 Bacteria 25170
219 Ga0496110_0034583 3300048913 Bacteria 4379
220 Ga0496111_0003983 3300048914 Bacteria 9274
221 Ga0496112_0017967 3300048915 Bacteria 6654
222 Ga0496112_0060334 3300048915 Bacteria 3738
223 Ga0501034_0008933 3300049571 Bacteria 10534
224 Ga0501036_0040183 3300049572 Bacteria 3956
225 Ga0501039_0039621 3300049575 Bacteria 3639
226 Ga0501040_0079201 3300049576 Bacteria 2274
227 Ga0501041_0030353 3300049577 Bacteria 3262
228 Ga0501042_0044315 3300049578 Bacteria 3169
229 Ga0501042_0051283 3300049578 Bacteria 2943
230 Ga0501048_0032398 3300049582 Bacteria 3777
231 Ga0501048_0106001 3300049582 Unclassified 1984
232 Ga0501071_0022452 3300049587 Bacteria 4398
233 Ga0501072_0108087 3300049588 Bacteria 2213
234 Ga0501073_0018927 3300049589 Bacteria 4976
235 Ga0501074_0033490 3300049590 Bacteria 3724
236 Ga0501075_0068597 3300049591 Bacteria 2679
237 Ga0501076_0034614 3300049592 Bacteria 3949
238 Ga0501079_0098316 3300049741 Bacteria 2269
239 Ga0501080_0123384 3300049742 Bacteria 2400
240 Ga0501081_0024438 3300049743 Bacteria 4057
241 Ga0501081_0047890 3300049743 Bacteria 2941
242 Ga0501081_0165885 3300049743 Bacteria 1593
243 Ga0501045_0011397 3300049824 Bacteria 6243
244 Ga0501045_0032581 3300049824 Bacteria 3777
245 nmdc:mga05p37_114503_c1 3300050507 Bacteria 3315
246 nmdc:mga05p37_119063_c1 3300050507 Bacteria 3244
247 nmdc:mga05p37_174_c1 3300050507 Bacteria 62666
248 nmdc:mga05p37_37058_c1 3300050507 Bacteria 5982
249 nmdc:mga05p37_59111_c1 3300050507 Bacteria 4722
250 nmdc:mga05p37_91446_c1 3300050507 Bacteria 3750
251 nmdc:mga09592_70248_c1 3300050508 Bacteria 2971
252 nmdc:mga0qj67_27976_c1 3300050509 Bacteria 4374
253 nmdc:mga06r32_12285_c1 3300050510 Bacteria 7723
254 nmdc:mga08y16_11898_c1 3300050511 Bacteria 9139
255 nmdc:mga08y16_1323_c1 3300050511 Bacteria 24650
256 nmdc:mga08y16_13520_c1 3300050511 Bacteria 8589
257 nmdc:mga08y16_194866_c1 3300050511 Bacteria 2101
258 nmdc:mga08y16_30570_c1 3300050511 Bacteria 5667
259 nmdc:mga08y16_66827_c1 3300050511 Bacteria 3752
260 nmdc:mga08y16_7358_c1 3300050511 Bacteria 11548
261 nmdc:mga0n895_66276_c1 3300050512 Bacteria 3576
262 nmdc:mga0n895_69114_c1 3300050512 Bacteria 3499
263 nmdc:mga0n895_85055_c1 3300050512 Bacteria 3157
264 nmdc:mga0rr50_101253_c1 3300050513 Bacteria 2264
265 nmdc:mga0rr50_122017_c1 3300050513 Bacteria 2076
266 nmdc:mga0rr50_128812_c1 3300050513 Bacteria 2024
267 nmdc:mga0rr50_177067_c1 3300050513 Bacteria 1741
268 nmdc:mga0a205_11798_c1 3300050515 Bacteria 8064
269 nmdc:mga0a205_20091_c1 3300050515 Bacteria 6301
270 nmdc:mga0a205_44765_c1 3300050515 Bacteria 1935
271 nmdc:mga0a205_54780_c1 3300050515 Bacteria 3851
272 nmdc:mga0a205_60109_c1 3300050515 Bacteria 3671
273 Ga0501084_0044263 3300054114 Bacteria 3727
274 Ga0590071_000352 3300059421 Bacteria 13553
275 Ga0590075_000387 3300059424 Bacteria 12095
276 Ga0590077_001067 3300059426 Bacteria 6805
277 Ga0501082_0090309 3300060353 Bacteria 2645
278 Ga0501082_0179133 3300060353 Bacteria 1843
279 Ga0530510_0011523 3300061734 Bacteria 6204
280 Ga0075434_100133099
281 JGI25406J46586_10003939
282 JGI25406J46586_10004873
283 Ga0065704_10076171
284 Ga0065707_10000901
285 Ga0070676_10034772
286 Ga0070683_100000094
287 Ga0070670_100018452
288 Ga0070670_100027710
289 Ga0070670_100027757
290 Ga0070670_100046401
291 Ga0070670_100123724
292 Ga0070689_100019127
293 Ga0070689_100068010
294 Ga0070692_10007847
295 Ga0070669_100001822
296 Ga0070669_100011205
297 Ga0070675_100000449
298 Ga0070675_100027150
299 Ga0070675_100124370
300 Ga0070671_100006444
301 Ga0070671_100039024
302 Ga0070674_100015819
303 Ga0070673_100009823
304 Ga0070673_100012525
305 Ga0070688_100004028
306 Ga0070667_100022990
307 Ga0070667_100048553
308 Ga0070713_100050907
309 Ga0070701_10017863
310 Ga0070705_100000175
311 Ga0070705_100016927
312 Ga0070705_100018084
313 Ga0070705_100024253
314 Ga0070700_100033404
315 Ga0070694_100018208
316 Ga0070694_100026117
317 Ga0070663_100008778
318 Ga0070681_10051979
319 Ga0068867_100015869
320 Ga0070685_10057766
321 Ga0070707_100140781
322 Ga0070698_100005848
323 Ga0070698_100029734
324 Ga0070699_100016246
325 Ga0070699_100019895
326 Ga0070679_100145532
327 Ga0070684_100006365
328 Ga0070684_100047468
329 Ga0070697_100084617
330 Ga0070672_100036831
331 Ga0070672_100115192
332 Ga0070695_100000031
333 Ga0070695_100011528
334 Ga0070696_100000952
335 Ga0070696_100023701
336 Ga0070696_100041441
337 Ga0070704_100012497
338 Ga0070704_100031595
339 Ga0070664_100000479
340 Ga0070664_100064565
341 Ga0068857_100152592
342 Ga0068854_100026719
343 Ga0070702_100080057
344 Ga0068859_100007314
345 Ga0068859_100153402
346 Ga0068864_100019195
347 Ga0068864_100020648
348 Ga0068864_100064321
349 Ga0068861_100020496
350 Ga0068870_10027008
351 Ga0068862_100003872
352 Ga0068862_100005534
353 Ga0068862_100065201
354 Ga0081539_10001531
355 Ga0081539_10004143
356 Ga0068871_100097360
357 Ga0075428_100002974
358 Ga0075428_100005429
359 Ga0075428_100006407
360 Ga0075428_100018349
361 Ga0075428_100305953
362 Ga0075430_100017589
363 Ga0075431_100030556
364 Ga0075433_10030452
365 Ga0075433_10111395
366 Ga0075434_100006826
367 Ga0075434_100008089
368 Ga0075434_100074431
369 Ga0075434_100104337
370 Ga0075429_100069596
371 Ga0075429_100079616
372 Ga0097620_100007314
373 Ga0097620_100153402
374 Ga0075435_100009945
375 Ga0075435_100019196
376 Ga0075435_100023529
377 Ga0075435_100127175
378 Ga0075435_100213212
379 Ga0111539_10007496
380 Ga0111539_10008659
381 Ga0111539_10031704
382 Ga0111539_10041292
383 Ga0111539_10063460
384 Ga0111539_10094850
385 Ga0111539_10099441
386 Ga0111539_10197216
387 Ga0114129_10000509
388 Ga0114129_10004448
389 Ga0114129_10070092
390 Ga0114129_10082441
391 Ga0114129_10092728
392 Ga0114129_10104379
393 Ga0105243_10021101
394 Ga0105243_10078289
395 Ga0105248_10025846
396 Ga0105248_10133992
397 Ga0105249_10019967
398 Ga0105249_10161279
399 Ga0105239_10144288
400 Ga0157374_10100575
401 Ga0157378_10081034
402 Ga0163162_10027609
403 Ga0157375_10066390
404 Ga0157375_10213776
405 Ga0157380_10016512
406 Ga0157380_10087918
407 Ga0157376_10122095
408 Ga0207643_10008506
409 Ga0207650_10011879
410 Ga0207650_10023094
411 Ga0207659_10000377
412 Ga0207659_10008692
413 Ga0207644_10008400
414 Ga0207706_10024380
415 Ga0207706_10047583
416 Ga0207706_10163055
417 Ga0207709_10023007
418 Ga0207709_10042129
419 Ga0207670_10009097
420 Ga0207670_10023659
421 Ga0207669_10103296
422 Ga0207691_10005509
423 Ga0207691_10043783
424 Ga0207691_10052899
425 Ga0207691_10057311
426 Ga0207711_10078149
427 Ga0207661_10004428
428 Ga0207679_10027949
429 Ga0207679_10029717
430 Ga0207679_10034965
431 Ga0207679_10130891
432 Ga0207651_10053456
433 Ga0207651_10097664
434 Ga0207668_10023113
435 Ga0207658_10110636
436 Ga0207703_10036387
437 Ga0207678_10024257
438 Ga0207708_10013816
439 Ga0207708_10023752
440 Ga0207648_10006114
441 Ga0207648_10024611
442 Ga0207676_10016263
443 Ga0207674_10032657
444 Ga0207675_100000725
445 Ga0207683_10057039
446 Ga0207428_10001989
447 Ga0207428_10002947
448 Ga0207428_10004630
449 Ga0207428_10020107
450 Ga0268265_10000160
451 Ga0268265_10005894
452 Ga0307511_10000260
453 Ga0307511_10008474
454 Ga0265332_10046814
455 Ga0265339_10000279
456 Ga0307408_100031506
457 Ga0307408_100040341
458 Ga0265314_10000343
459 Ga0265342_10011797
460 Ga0307405_10037943
461 Ga0307413_10028722
462 Ga0307413_10049101
463 Ga0307410_10099652
464 Ga0307407_10026601
465 Ga0307409_100050194
466 Ga0307409_100135327
467 Ga0307416_100044438
468 Ga0307414_10025579
469 Ga0307414_10064708
470 Ga0307411_10034021
471 Ga0307411_10042933
472 Ga0307411_10059334
473 Ga0307415_100022048
474 Ga0307415_100033359
475 Ga0373936_0005851
476 Ga0373936_0015500
477 Ga0373937_0043758
478 Ga0451577_0094388
479 Ga0466960_0030642
480 Ga0451576_0020758
481 Ga0451576_0065765
482 Ga0495603_0028612
483 Ga0495642_0033671
484 Ga0495621_0014476
485 Ga0495633_0019290
486 Ga0495659_0005991
487 Ga0495659_0019774
488 Ga0495669_0029707
489 Ga0495669_0042424
490 Ga0495636_0001231
491 Ga0495674_0088293
492 Ga0495677_0007841
493 Ga0496102_0133487
494 Ga0496103_0027362
495 Ga0496106_0078483
496 Ga0496108_0026415
497 Ga0496109_0000869
498 Ga0496110_0034583
499 Ga0496111_0003983
500 Ga0496112_0017967
501 Ga0496112_0060334
502 Ga0501034_0008933
503 Ga0501036_0040183
504 Ga0501039_0039621
505 Ga0501040_0079201
506 Ga0501041_0030353
507 Ga0501042_0044315
508 Ga0501042_0051283
509 Ga0501048_0032398
510 Ga0501048_0106001
511 Ga0501071_0022452
512 Ga0501072_0108087
513 Ga0501073_0018927
514 Ga0501074_0033490
515 Ga0501075_0068597
516 Ga0501076_0034614
517 Ga0501079_0098316
518 Ga0501080_0123384
519 Ga0501081_0024438
520 Ga0501081_0047890
521 Ga0501081_0165885
522 Ga0501045_0011397
523 Ga0501045_0032581
524 nmdc:mga05p37_114503_c1
525 nmdc:mga05p37_119063_c1
526 nmdc:mga05p37_174_c1
527 nmdc:mga05p37_37058_c1
528 nmdc:mga05p37_59111_c1
529 nmdc:mga05p37_91446_c1
530 nmdc:mga09592_70248_c1
531 nmdc:mga0qj67_27976_c1
532 nmdc:mga06r32_12285_c1
533 nmdc:mga08y16_11898_c1
534 nmdc:mga08y16_1323_c1
535 nmdc:mga08y16_13520_c1
536 nmdc:mga08y16_194866_c1
537 nmdc:mga08y16_30570_c1
538 nmdc:mga08y16_66827_c1
539 nmdc:mga08y16_7358_c1
540 nmdc:mga0n895_66276_c1
541 nmdc:mga0n895_69114_c1
542 nmdc:mga0n895_85055_c1
543 nmdc:mga0rr50_101253_c1
544 nmdc:mga0rr50_122017_c1
545 nmdc:mga0rr50_128812_c1
546 nmdc:mga0rr50_177067_c1
547 nmdc:mga0a205_11798_c1
548 nmdc:mga0a205_20091_c1
549 nmdc:mga0a205_44765_c1
550 nmdc:mga0a205_54780_c1
551 nmdc:mga0a205_60109_c1
552 Ga0501084_0044263
553 Ga0590071_000352
554 Ga0590075_000387
555 Ga0590077_001067
556 Ga0501082_0090309
557 Ga0501082_0179133
558 Ga0530510_0011523

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

6

324

0.99

PF19269

Anticodon_2

Anticodon binding domain

337

489

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g6z-assembly1.cif.gz_A crystal structure of a glutamyl-trna synthetase glurs from burkholderia thailandensis bound to l-glutamate 0.8543 1 365
3afh-assembly1.cif.gz_A crystal structure of thermotoga maritima nondiscriminating glutamyl-trna synthetase in complex with a glutamyl-amp analog 0.8536 1 487
2cv1-assembly1.cif.gz_A glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex 0.8485 1 486
3afh-assembly1.cif.gz_A crystal structure of thermotoga maritima nondiscriminating glutamyl-trna synthetase in complex with a glutamyl-amp analog 0.8484 1 487
2cv1-assembly1.cif.gz_A glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex 0.8435 1 486
ID Description Score Start End Superfamily
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9855 1 242 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9696 1 242 3.40.50.620
af_Q8IDD3_74_404_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9657 1 326 3.40.50.620
af_Q2G241_1_332_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.965 1 326 3.40.50.620
af_Q9FEA2_46_378_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9643 1 324 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7S0BHE2-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.995 1 109 GO:0004818
GO:0005524
GO:0005739
GO:0006424
AF-A0A6B3G3K0-F1-model_v4 Glutamate--tRNA ligase 0.9929 1 108 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A2N1QN43-F1-model_v4 Glutamate--tRNA ligase 0.9885 1 231 GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0008270
AF-A0A3M3PBN4-F1-model_v4 deleted 0.988 1 95
AF-A0A031M9B7-F1-model_v4 Glutamyl-tRNA synthetase (tRNA synthetases class I (E and Q), catalytic domain) 0.9855 1 95 GO:0004818
GO:0005524
GO:0005829
GO:0006424

Map