F382972

General Info

Members Datasets Scaffolds Average Seq Length
279 167 273 80

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_101597852|Ga0097621_1015978522
Length 94
Sequence MAPADEEDAGRIHCRLDELLEARGMTLTRLSELVGVSIVNLSVLKNDRARAIRFSTLTAICEALDCEVGELLVVAERSDDVSSGLDTVHPVKLA

Samples

Sample ID Description Type Environment
1 2643221549 Agromyces sp. Root1464 Isolate Unclassified
2 2643221619 Agromyces sp. Root81 Isolate Unclassified
3 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
4 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
5 2808606372 Agromyces sp. 23-23 Isolate Unclassified
6 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
80 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
95 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
96 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
97 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
98 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
99 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
100 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
101 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
102 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
103 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
104 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
105 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
106 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
107 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
108 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
109 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
110 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
111 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
159 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
160 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
164 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.85
Metatranscriptomes 0
Isolates 2.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.89
Nodule 0
Rhizoplane 3.94
Rhizosphere 73.48
Stem 0
Stem Tuber 0
Unclassified 14.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10231157 3300003322 Bacteria 2449
2 Ga0065714_10077751 3300005288 Bacteria 2658
3 Ga0065714_10528523 3300005288 Bacteria 509
4 Ga0070658_10113023 3300005327 Bacteria 2251
5 Ga0070658_10471592 3300005327 Bacteria 1083
6 Ga0070682_101122011 3300005337 Bacteria 659
7 Ga0070687_101078335 3300005343 Bacteria 586
8 Ga0070661_100182823 3300005344 Bacteria 1596
9 Ga0070661_101193506 3300005344 Bacteria 636
10 Ga0070671_100937223 3300005355 Bacteria 757
11 Ga0070671_101898979 3300005355 Bacteria 530
12 Ga0070659_100007936 3300005366 Bacteria 7733
13 Ga0070667_100034918 3300005367 Bacteria 4210
14 Ga0070667_100045268 3300005367 Bacteria 3699
15 Ga0070710_10434288 3300005437 Bacteria 887
16 Ga0070701_11289378 3300005438 Bacteria 521
17 Ga0070663_100076659 3300005455 Bacteria 2445
18 Ga0070678_100246346 3300005456 Bacteria 1496
19 Ga0070685_10091630 3300005466 Bacteria 1841
20 Ga0070679_101282078 3300005530 Bacteria 678
21 Ga0068853_100057860 3300005539 Bacteria 3346
22 Ga0068853_100703900 3300005539 Bacteria 964
23 Ga0068855_100003178 3300005563 Bacteria 20111
24 Ga0068855_100050896 3300005563 Bacteria 4880
25 Ga0068855_100186956 3300005563 Bacteria 2339
26 Ga0068855_100594051 3300005563 Bacteria 1194
27 Ga0068855_101011495 3300005563 Bacteria 873
28 Ga0068857_100186516 3300005577 Bacteria 1888
29 Ga0068857_100415867 3300005577 Bacteria 1253
30 Ga0068857_100495187 3300005577 Bacteria 1146
31 Ga0068856_100030933 3300005614 Bacteria 5235
32 Ga0068856_100111236 3300005614 Bacteria 2736
33 Ga0068856_100177508 3300005614 Bacteria 2142
34 Ga0068852_100124679 3300005616 Bacteria 2363
35 Ga0068859_100238042 3300005617 Bacteria 1909
36 Ga0068859_100885566 3300005617 Bacteria 978
37 Ga0068864_101148329 3300005618 Bacteria 774
38 Ga0068851_10000027 3300005834 Bacteria 118586
39 Ga0068870_10057659 3300005840 Bacteria 2077
40 Ga0068858_100005146 3300005842 Bacteria 12814
41 Ga0068858_102142459 3300005842 Bacteria 553
42 Ga0075365_10107879 3300006038 Bacteria 1912
43 Ga0075365_10297367 3300006038 Bacteria 1136
44 Ga0075363_100499667 3300006048 Bacteria 722
45 Ga0075364_10020147 3300006051 Bacteria 4194
46 Ga0075364_10441202 3300006051 Bacteria 889
47 Ga0075364_10623757 3300006051 Bacteria 737
48 Ga0075432_10014293 3300006058 Bacteria 2703
49 Ga0097621_101597852 3300006237 Bacteria 620
50 Ga0075370_10099524 3300006353 Bacteria 1682
51 Ga0097620_100238042 3300006931 Bacteria 1909
52 Ga0097620_100885542 3300006931 Bacteria 978
53 Ga0105240_10038979 3300009093 Bacteria 6090
54 Ga0105240_11912015 3300009093 Bacteria 617
55 Ga0111539_10372178 3300009094 Bacteria 1663
56 Ga0111539_13142783 3300009094 Bacteria 533
57 Ga0105245_10060067 3300009098 Bacteria 3424
58 Ga0105245_12248814 3300009098 Bacteria 599
59 Ga0105243_11492264 3300009148 Bacteria 699
60 Ga0105241_10013427 3300009174 Bacteria 6004
61 Ga0105241_11372847 3300009174 Bacteria 675
62 Ga0105237_10004619 3300009545 Bacteria 15868
63 Ga0105237_10037073 3300009545 Bacteria 4930
64 Ga0105238_10014508 3300009551 Bacteria 7968
65 Ga0105238_11073309 3300009551 Bacteria 827
66 Ga0105249_10039296 3300009553 Bacteria 4296
67 Ga0105239_10114437 3300010375 Bacteria 2992
68 Ga0105239_10255314 3300010375 Bacteria 1969
69 Ga0105239_10319612 3300010375 Bacteria 1750
70 Ga0105239_10793604 3300010375 Bacteria 1085
71 Ga0105239_11222413 3300010375 Bacteria 866
72 Ga0105246_10102031 3300011119 Bacteria 2091
73 Ga0157374_10661848 3300013296 Bacteria 1056
74 Ga0157375_10508430 3300013308 Bacteria 1369
75 Ga0157380_10009288 3300014326 Bacteria 7039
76 Ga0157376_10396706 3300014969 Bacteria 1333
77 Ga0163161_10190326 3300017792 Bacteria 1577
78 Ga0207656_10000001 3300025321 Bacteria 1323684
79 Ga0207655_1184776 3300025728 Bacteria 634
80 Ga0207692_10076861 3300025898 Bacteria 1775
81 Ga0207688_10082547 3300025901 Bacteria 1837
82 Ga0207643_10087063 3300025908 Bacteria 1816
83 Ga0207705_10152194 3300025909 Bacteria 1734
84 Ga0207705_10785775 3300025909 Bacteria 739
85 Ga0207654_10000001 3300025911 Bacteria 1816198
86 Ga0207654_10130866 3300025911 Bacteria 1588
87 Ga0207695_10007866 3300025913 Bacteria 13459
88 Ga0207695_10345843 3300025913 Bacteria 1375
89 Ga0207695_10493447 3300025913 Bacteria 1107
90 Ga0207671_10000001 3300025914 Bacteria 1318881
91 Ga0207671_10019081 3300025914 Bacteria 5252
92 Ga0207671_10047989 3300025914 Bacteria 3160
93 Ga0207694_10000127 3300025924 Bacteria 79064
94 Ga0207694_10733234 3300025924 Bacteria 834
95 Ga0207650_11358795 3300025925 Bacteria 605
96 Ga0207687_10084673 3300025927 Bacteria 2299
97 Ga0207644_10724025 3300025931 Bacteria 830
98 Ga0207690_10001773 3300025932 Bacteria 13270
99 Ga0207667_10003203 3300025949 Bacteria 20230
100 Ga0207667_10008830 3300025949 Bacteria 11929
101 Ga0207667_11384891 3300025949 Bacteria 677
102 Ga0207658_10061667 3300025986 Bacteria 2803
103 Ga0207658_10424153 3300025986 Bacteria 1173
104 Ga0207703_10000607 3300026035 Bacteria 36369
105 Ga0207639_10029956 3300026041 Bacteria 3989
106 Ga0207639_10335852 3300026041 Bacteria 1346
107 Ga0207678_10120886 3300026067 Bacteria 2235
108 Ga0207702_10146234 3300026078 Bacteria 2145
109 Ga0207702_10236012 3300026078 Bacteria 1711
110 Ga0207702_10246849 3300026078 Bacteria 1675
111 Ga0207702_11401249 3300026078 Bacteria 693
112 Ga0207674_10558383 3300026116 Bacteria 1106
113 Ga0207674_10658963 3300026116 Bacteria 1011
114 Ga0207674_11635982 3300026116 Bacteria 612
115 Ga0207675_100314101 3300026118 Bacteria 1529
116 Ga0207683_10141693 3300026121 Bacteria 2167
117 Ga0207698_10002271 3300026142 Bacteria 11378
118 Ga0207698_10144462 3300026142 Bacteria 2055
119 Ga0207428_10094138 3300027907 Bacteria 2323
120 Ga0316179_1120418 3300030734 Bacteria 865
121 Ga0316183_1073969 3300030742 Bacteria 507
122 Ga0307513_10623054 3300031456 Bacteria 787
123 Ga0307408_100019701 3300031548 Bacteria 4545
124 Ga0307408_100368548 3300031548 Bacteria 1224
125 Ga0307408_100493573 3300031548 Bacteria 1070
126 Ga0307405_10023249 3300031731 Bacteria 3520
127 Ga0307413_10030467 3300031824 Bacteria 3031
128 Ga0307413_10279552 3300031824 Bacteria 1255
129 Ga0307410_10268884 3300031852 Bacteria 1333
130 Ga0307410_10328325 3300031852 Bacteria 1216
131 Ga0307410_10668801 3300031852 Bacteria 873
132 Ga0307410_10776876 3300031852 Bacteria 813
133 Ga0307406_10086871 3300031901 Bacteria 2095
134 Ga0307406_10582998 3300031901 Bacteria 920
135 Ga0307406_11471648 3300031901 Bacteria 599
136 Ga0307407_10047138 3300031903 Bacteria 2444
137 Ga0307407_10746411 3300031903 Bacteria 741
138 Ga0307412_10301881 3300031911 Bacteria 1266
139 Ga0307412_10324531 3300031911 Bacteria 1226
140 Ga0307409_100073635 3300031995 Bacteria 2725
141 Ga0307409_100385891 3300031995 Bacteria 1333
142 Ga0307409_100717518 3300031995 Bacteria 1001
143 Ga0307409_102910859 3300031995 Bacteria 506
144 Ga0307416_100222172 3300032002 Bacteria 1813
145 Ga0307416_100262814 3300032002 Bacteria 1688
146 Ga0307416_100509512 3300032002 Bacteria 1269
147 Ga0307416_100554859 3300032002 Bacteria 1223
148 Ga0307416_102950556 3300032002 Bacteria 569
149 Ga0307416_103067267 3300032002 Bacteria 559
150 Ga0307416_103407468 3300032002 Bacteria 532
151 Ga0307414_11237790 3300032004 Bacteria 692
152 Ga0307414_11658144 3300032004 Bacteria 596
153 Ga0307411_11721503 3300032005 Bacteria 581
154 Ga0307415_100221325 3300032126 Bacteria 1518
155 Ga0439436_0082108 3300041404 Bacteria 897
156 Ga0439438_010803 3300041405 Bacteria 2872
157 Ga0439439_0014118 3300041406 Bacteria 1942
158 Ga0439466_0006855 3300041411 Bacteria 4317
159 Ga0439465_0035721 3300041413 Bacteria 1594
160 Ga0439465_0381213 3300041413 Bacteria 535
161 Ga0451791_0584919 3300041451 Bacteria 1521
162 Ga0451791_1081891 3300041451 Bacteria 545
163 Ga0451795_0896892 3300041456 Bacteria 512
164 Ga0451807_2580041 3300041486 Bacteria 797
165 Ga0451841_1195529 3300041498 Bacteria 695
166 Ga0451845_0422137 3300041501 Bacteria 628
167 Ga0451849_1435203 3300041505 Bacteria 625
168 Ga0451853_0475137 3300041512 Bacteria 616
169 Ga0451853_0600491 3300041512 Bacteria 871
170 Ga0439433_0000807 3300041999 Bacteria 6191
171 Ga0439442_022947 3300042002 Bacteria 1296
172 Ga0439449_0014079 3300042007 Bacteria 3008
173 Ga0439457_016188 3300042014 Bacteria 1663
174 Ga0439434_0024343 3300042435 Bacteria 1826
175 Ga0450918_083777 3300042531 Bacteria 611
176 Ga0466965_0038695 3300044683 Bacteria 2343
177 Ga0466968_0036457 3300044735 Bacteria 2061
178 Ga0466970_0205888 3300044765 Bacteria 1095
179 Ga0466957_0277716 3300044842 Bacteria 1120
180 Ga0495627_032723 3300046453 Bacteria 1635
181 Ga0495650_0002011 3300046471 Bacteria 17838
182 Ga0495673_0334700 3300047469 Bacteria 537
183 Ga0495686_0157189 3300047472 Bacteria 1331
184 Ga0496102_0241514 3300048905 Bacteria 1703
185 Ga0496104_0443535 3300048907 Bacteria 1210
186 Ga0496109_0701959 3300048912 Bacteria 949
187 Ga0496111_0058558 3300048914 Bacteria 2789
188 Ga0496114_0023803 3300048917 Bacteria 4998
189 Ga0496114_0360325 3300048917 Bacteria 1286
190 Ga0496114_1053900 3300048917 Bacteria 697
191 Ga0496117_0000070 3300048920 Bacteria 245027
192 Ga0496117_0005093 3300048920 Bacteria 14054
193 Ga0496117_0066068 3300048920 Bacteria 2455
194 Ga0496118_0012992 3300048921 Bacteria 7928
195 Ga0496118_0015184 3300048921 Bacteria 7151
196 Ga0496119_0000888 3300048922 Bacteria 39161
197 Ga0496119_0007300 3300048922 Bacteria 9999
198 Ga0496119_0010210 3300048922 Bacteria 7924
199 Ga0496119_0194466 3300048922 Bacteria 1055
200 Ga0496120_0000356 3300048923 Bacteria 75147
201 Ga0496120_0000462 3300048923 Bacteria 64059
202 Ga0496120_0002774 3300048923 Bacteria 17040
203 Ga0496120_0068457 3300048923 Bacteria 1958
204 Ga0496122_0000105 3300048925 Bacteria 194509
205 Ga0496122_0000681 3300048925 Bacteria 67927
206 Ga0496123_0000075 3300048926 Bacteria 194499
207 Ga0496123_0000667 3300048926 Bacteria 56722
208 Ga0496123_0007463 3300048926 Bacteria 10282
209 Ga0496123_0301123 3300048926 Bacteria 765
210 Ga0496124_0026429 3300048927 Bacteria 5233
211 Ga0496125_0065680 3300048928 Bacteria 2872
212 Ga0496125_0163274 3300048928 Bacteria 1509
213 Ga0496126_0008993 3300048929 Bacteria 10689
214 Ga0496126_0009653 3300048929 Bacteria 10225
215 Ga0496126_0088440 3300048929 Bacteria 2728
216 Ga0496126_0293769 3300048929 Bacteria 1343
217 Ga0496126_0442511 3300048929 Bacteria 1047
218 Ga0496126_0646965 3300048929 Bacteria 828
219 Ga0496126_1163278 3300048929 Bacteria 569
220 Ga0496126_1388723 3300048929 Bacteria 507
221 Ga0501032_0653327 3300049569 Bacteria 668
222 Ga0501034_0063808 3300049571 Bacteria 3697
223 Ga0501034_0178801 3300049571 Bacteria 2087
224 Ga0501036_0108494 3300049572 Bacteria 2347
225 Ga0501036_1548650 3300049572 Bacteria 536
226 Ga0501037_0026190 3300049573 Bacteria 4310
227 Ga0501037_0340712 3300049573 Bacteria 1035
228 Ga0501038_0577209 3300049574 Bacteria 853
229 Ga0501038_0965424 3300049574 Bacteria 627
230 Ga0501039_1166815 3300049575 Bacteria 596
231 Ga0501041_0979411 3300049577 Bacteria 544
232 Ga0501043_0038679 3300049579 Bacteria 3751
233 Ga0501043_0091734 3300049579 Bacteria 2388
234 Ga0501043_0117752 3300049579 Bacteria 2084
235 Ga0501046_0246863 3300049580 Bacteria 1315
236 Ga0501047_0014026 3300049581 Bacteria 7615
237 Ga0501047_0025061 3300049581 Bacteria 5730
238 Ga0501067_0471721 3300049583 Bacteria 701
239 Ga0501070_0004545 3300049586 Bacteria 11909
240 Ga0501070_0046771 3300049586 Bacteria 3598
241 Ga0501070_0762850 3300049586 Bacteria 762
242 Ga0501070_1399259 3300049586 Bacteria 532
243 Ga0501072_1451073 3300049588 Bacteria 530
244 Ga0501073_0000216 3300049589 Bacteria 37584
245 Ga0501073_0013187 3300049589 Bacteria 6024
246 Ga0501074_0258619 3300049590 Bacteria 1238
247 Ga0501074_0305983 3300049590 Bacteria 1129
248 Ga0501076_0291173 3300049592 Bacteria 1338
249 Ga0501080_0000040 3300049742 Bacteria 81733
250 Ga0501080_0064428 3300049742 Bacteria 3409
251 Ga0501083_0137603 3300049744 Bacteria 1599
252 Ga0501035_0002344 3300049822 Bacteria 18653
253 Ga0501044_0004140 3300049823 Bacteria 16284
254 Ga0501045_0504555 3300049824 Bacteria 898
255 nmdc:mga00v17_169187_c1 3300050491 Bacteria 1409
256 nmdc:mga08y16_1375371_c1 3300050511 Bacteria 670
257 Ga0500556_0000145 3300053104 Bacteria 59342
258 Ga0500562_003787 3300053108 Bacteria 3806
259 Ga0500593_011564 3300053117 Bacteria 3727
260 Ga0500655_001961 3300053133 Bacteria 3822
261 Ga0500559_0000303 3300053136 Bacteria 37519
262 Ga0500573_0003192 3300053140 Bacteria 8423
263 Ga0500573_0035429 3300053140 Bacteria 2880
264 Ga0500573_0101347 3300053140 Bacteria 1620
265 Ga0500573_0426509 3300053140 Bacteria 620
266 Ga0500577_0276389 3300053142 Bacteria 732
267 Ga0500577_0366947 3300053142 Bacteria 630
268 Ga0500590_088864 3300053148 Bacteria 1504
269 Ga0500616_0000192 3300053153 Bacteria 100229
270 Ga0500616_0058447 3300053153 Bacteria 2006
271 Ga0501084_0174108 3300054114 Bacteria 1816
272 Ga0501082_0686907 3300060353 Bacteria 896
273 Ga0501082_1687103 3300060353 Bacteria 553

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048907 Ga0496104_0443535 Ga0496104_0443535_399_629 69
2 3300032002 Ga0307416_100222172 Ga0307416_1002221722 72
3 iso_pu_bacteria 2643221549 2643768697 72
4 iso_pu_bacteria 2643221619 2644112103 72
5 iso_pu_bacteria 2721755702 2723643247 72
6 iso_pu_bacteria 2757320536 2758224996 72
7 iso_pu_bacteria 2808606372 2808900919 72
8 iso_pu_bacteria 2935409751 2935412003 72
9 3300006048 Ga0075363_100499667 Ga0075363_1004996672 73
10 3300013308 Ga0157375_10508430 Ga0157375_105084303 73
11 3300031548 Ga0307408_100019701 Ga0307408_1000197012 73
12 3300031548 Ga0307408_100368548 Ga0307408_1003685482 73
13 3300031548 Ga0307408_100493573 Ga0307408_1004935731 73
14 3300031731 Ga0307405_10023249 Ga0307405_100232495 73
15 3300031824 Ga0307413_10030467 Ga0307413_100304673 73
16 3300031852 Ga0307410_10268884 Ga0307410_102688842 73
17 3300031852 Ga0307410_10328325 Ga0307410_103283252 73
18 3300031852 Ga0307410_10668801 Ga0307410_106688012 73
19 3300031911 Ga0307412_10324531 Ga0307412_103245312 73
20 3300031995 Ga0307409_100073635 Ga0307409_1000736351 73
21 3300031995 Ga0307409_100717518 Ga0307409_1007175183 73
22 3300032002 Ga0307416_100262814 Ga0307416_1002628142 73
23 3300041404 Ga0439436_0082108 Ga0439436_0082108_268_507 73
24 3300041405 Ga0439438_010803 Ga0439438_010803_220_459 73
25 3300041406 Ga0439439_0014118 Ga0439439_0014118_197_436 73
26 3300041411 Ga0439466_0006855 Ga0439466_0006855_45_284 73
27 3300041999 Ga0439433_0000807 Ga0439433_0000807_5300_5539 73
28 3300042002 Ga0439442_022947 Ga0439442_022947_624_863 73
29 3300042007 Ga0439449_0014079 Ga0439449_0014079_1822_2061 73
30 3300042014 Ga0439457_016188 Ga0439457_016188_838_1077 73
31 3300042435 Ga0439434_0024343 Ga0439434_0024343_1332_1571 73
32 3300042531 Ga0450918_083777 Ga0450918_083777_181_420 73
33 3300049569 Ga0501032_0653327 Ga0501032_0653327_409_642 73
34 3300049574 Ga0501038_0577209 Ga0501038_0577209_264_497 73
35 3300049579 Ga0501043_0038679 Ga0501043_0038679_3104_3337 73
36 3300005367 Ga0070667_100045268 Ga0070667_1000452684 74
37 3300006051 Ga0075364_10441202 Ga0075364_104412022 74
38 3300006058 Ga0075432_10014293 Ga0075432_100142934 74
39 3300025986 Ga0207658_10424153 Ga0207658_104241532 74
40 3300027907 Ga0207428_10094138 Ga0207428_100941382 74
41 3300030734 Ga0316179_1120418 Ga0316179_11204182 74
42 3300046453 Ga0495627_032723 Ga0495627_032723_705_962 74
43 3300048925 Ga0496122_0000681 Ga0496122_0000681_14323_14565 74
44 3300048926 Ga0496123_0000667 Ga0496123_0000667_22768_23010 74
45 3300053140 Ga0500573_0426509 Ga0500573_0426509_48_287 74
46 3300005288 Ga0065714_10077751 Ga0065714_100777512 75
47 3300006038 Ga0075365_10107879 Ga0075365_101078793 75
48 3300006353 Ga0075370_10099524 Ga0075370_100995243 75
49 3300009148 Ga0105243_11492264 Ga0105243_114922641 75
50 3300030742 Ga0316183_1073969 Ga0316183_10739692 75
51 3300031903 Ga0307407_10746411 Ga0307407_107464112 75
52 3300041413 Ga0439465_0035721 Ga0439465_0035721_1216_1449 75
53 3300041451 Ga0451791_1081891 Ga0451791_1081891_228_458 75
54 3300003322 rootL2_10231157 rootL2_102311574 76
55 3300005288 Ga0065714_10528523 Ga0065714_105285231 76
56 3300005327 Ga0070658_10113023 Ga0070658_101130232 76
57 3300005327 Ga0070658_10471592 Ga0070658_104715922 76
58 3300005337 Ga0070682_101122011 Ga0070682_1011220112 76
59 3300005343 Ga0070687_101078335 Ga0070687_1010783352 76
60 3300005344 Ga0070661_100182823 Ga0070661_1001828231 76
61 3300005344 Ga0070661_101193506 Ga0070661_1011935062 76
62 3300005355 Ga0070671_100937223 Ga0070671_1009372231 76
63 3300005355 Ga0070671_101898979 Ga0070671_1018989792 76
64 3300005366 Ga0070659_100007936 Ga0070659_1000079366 76
65 3300005367 Ga0070667_100034918 Ga0070667_1000349182 76
66 3300005437 Ga0070710_10434288 Ga0070710_104342882 76
67 3300005438 Ga0070701_11289378 Ga0070701_112893782 76
68 3300005455 Ga0070663_100076659 Ga0070663_1000766592 76
69 3300005456 Ga0070678_100246346 Ga0070678_1002463464 76
70 3300005466 Ga0070685_10091630 Ga0070685_100916303 76
71 3300005530 Ga0070679_101282078 Ga0070679_1012820781 76
72 3300005539 Ga0068853_100057860 Ga0068853_1000578603 76
73 3300005539 Ga0068853_100703900 Ga0068853_1007039002 76
74 3300005563 Ga0068855_100003178 Ga0068855_10000317823 76
75 3300005563 Ga0068855_100050896 Ga0068855_1000508963 76
76 3300005563 Ga0068855_100186956 Ga0068855_1001869562 76
77 3300005563 Ga0068855_100594051 Ga0068855_1005940513 76
78 3300005563 Ga0068855_101011495 Ga0068855_1010114952 76
79 3300005577 Ga0068857_100186516 Ga0068857_1001865161 76
80 3300005577 Ga0068857_100415867 Ga0068857_1004158672 76
81 3300005577 Ga0068857_100495187 Ga0068857_1004951873 76
82 3300005614 Ga0068856_100030933 Ga0068856_1000309336 76
83 3300005614 Ga0068856_100111236 Ga0068856_1001112363 76
84 3300005614 Ga0068856_100177508 Ga0068856_1001775082 76
85 3300005616 Ga0068852_100124679 Ga0068852_1001246793 76
86 3300005617 Ga0068859_100238042 Ga0068859_1002380424 76
87 3300005617 Ga0068859_100885566 Ga0068859_1008855662 76
88 3300005618 Ga0068864_101148329 Ga0068864_1011483292 76
89 3300005834 Ga0068851_10000027 Ga0068851_1000002725 76
90 3300005840 Ga0068870_10057659 Ga0068870_100576592 76
91 3300005842 Ga0068858_100005146 Ga0068858_1000051462 76
92 3300005842 Ga0068858_102142459 Ga0068858_1021424592 76
93 3300006038 Ga0075365_10297367 Ga0075365_102973672 76
94 3300006051 Ga0075364_10020147 Ga0075364_100201473 76
95 3300006051 Ga0075364_10623757 Ga0075364_106237572 76
96 3300006237 Ga0097621_101597852 Ga0097621_1015978522 76
97 3300006931 Ga0097620_100238042 Ga0097620_1002380424 76
98 3300006931 Ga0097620_100885542 Ga0097620_1008855422 76
99 3300009093 Ga0105240_10038979 Ga0105240_100389793 76
100 3300009093 Ga0105240_11912015 Ga0105240_119120151 76
101 3300009094 Ga0111539_10372178 Ga0111539_103721783 76
102 3300009094 Ga0111539_13142783 Ga0111539_131427831 76
103 3300009098 Ga0105245_10060067 Ga0105245_100600673 76
104 3300009098 Ga0105245_12248814 Ga0105245_122488141 76
105 3300009174 Ga0105241_10013427 Ga0105241_100134278 76
106 3300009174 Ga0105241_11372847 Ga0105241_113728472 76
107 3300009545 Ga0105237_10004619 Ga0105237_1000461919 76
108 3300009545 Ga0105237_10037073 Ga0105237_100370734 76
109 3300009551 Ga0105238_10014508 Ga0105238_1001450810 76
110 3300009551 Ga0105238_11073309 Ga0105238_110733092 76
111 3300009553 Ga0105249_10039296 Ga0105249_100392964 76
112 3300010375 Ga0105239_10114437 Ga0105239_101144373 76
113 3300010375 Ga0105239_10255314 Ga0105239_102553142 76
114 3300010375 Ga0105239_10319612 Ga0105239_103196122 76
115 3300010375 Ga0105239_10793604 Ga0105239_107936042 76
116 3300010375 Ga0105239_11222413 Ga0105239_112224132 76
117 3300011119 Ga0105246_10102031 Ga0105246_101020313 76
118 3300013296 Ga0157374_10661848 Ga0157374_106618482 76
119 3300014326 Ga0157380_10009288 Ga0157380_100092882 76
120 3300014969 Ga0157376_10396706 Ga0157376_103967062 76
121 3300017792 Ga0163161_10190326 Ga0163161_101903262 76
122 3300025321 Ga0207656_10000001 Ga0207656_10000001984 76
123 3300025728 Ga0207655_1184776 Ga0207655_11847762 76
124 3300025898 Ga0207692_10076861 Ga0207692_100768612 76
125 3300025901 Ga0207688_10082547 Ga0207688_100825473 76
126 3300025908 Ga0207643_10087063 Ga0207643_100870633 76
127 3300025909 Ga0207705_10152194 Ga0207705_101521942 76
128 3300025909 Ga0207705_10785775 Ga0207705_107857752 76
129 3300025911 Ga0207654_10000001 Ga0207654_10000001295 76
130 3300025911 Ga0207654_10130866 Ga0207654_101308662 76
131 3300025913 Ga0207695_10007866 Ga0207695_100078663 76
132 3300025913 Ga0207695_10345843 Ga0207695_103458432 76
133 3300025913 Ga0207695_10493447 Ga0207695_104934472 76
134 3300025914 Ga0207671_10000001 Ga0207671_10000001983 76
135 3300025914 Ga0207671_10019081 Ga0207671_100190811 76
136 3300025914 Ga0207671_10047989 Ga0207671_100479894 76
137 3300025924 Ga0207694_10000127 Ga0207694_1000012715 76
138 3300025924 Ga0207694_10733234 Ga0207694_107332342 76
139 3300025925 Ga0207650_11358795 Ga0207650_113587952 76
140 3300025927 Ga0207687_10084673 Ga0207687_100846732 76
141 3300025931 Ga0207644_10724025 Ga0207644_107240252 76
142 3300025932 Ga0207690_10001773 Ga0207690_100017736 76
143 3300025949 Ga0207667_10003203 Ga0207667_100032034 76
144 3300025949 Ga0207667_10008830 Ga0207667_100088303 76
145 3300025949 Ga0207667_11384891 Ga0207667_113848912 76
146 3300025986 Ga0207658_10061667 Ga0207658_100616675 76
147 3300026035 Ga0207703_10000607 Ga0207703_100006072 76
148 3300026041 Ga0207639_10029956 Ga0207639_100299563 76
149 3300026041 Ga0207639_10335852 Ga0207639_103358522 76
150 3300026067 Ga0207678_10120886 Ga0207678_101208863 76
151 3300026078 Ga0207702_10146234 Ga0207702_101462342 76
152 3300026078 Ga0207702_10236012 Ga0207702_102360122 76
153 3300026078 Ga0207702_10246849 Ga0207702_102468492 76
154 3300026078 Ga0207702_11401249 Ga0207702_114012492 76
155 3300026116 Ga0207674_10558383 Ga0207674_105583833 76
156 3300026116 Ga0207674_10658963 Ga0207674_106589631 76
157 3300026116 Ga0207674_11635982 Ga0207674_116359822 76
158 3300026118 Ga0207675_100314101 Ga0207675_1003141012 76
159 3300026121 Ga0207683_10141693 Ga0207683_101416933 76
160 3300026142 Ga0207698_10002271 Ga0207698_100022717 76
161 3300026142 Ga0207698_10144462 Ga0207698_101444622 76
162 3300031456 Ga0307513_10623054 Ga0307513_106230542 76
163 3300031824 Ga0307413_10279552 Ga0307413_102795522 76
164 3300031852 Ga0307410_10776876 Ga0307410_107768762 76
165 3300031901 Ga0307406_10086871 Ga0307406_100868713 76
166 3300031901 Ga0307406_10582998 Ga0307406_105829982 76
167 3300031901 Ga0307406_11471648 Ga0307406_114716482 76
168 3300031903 Ga0307407_10047138 Ga0307407_100471384 76
169 3300031911 Ga0307412_10301881 Ga0307412_103018812 76
170 3300031995 Ga0307409_100385891 Ga0307409_1003858913 76
171 3300031995 Ga0307409_102910859 Ga0307409_1029108592 76
172 3300032002 Ga0307416_100509512 Ga0307416_1005095122 76
173 3300032002 Ga0307416_100554859 Ga0307416_1005548592 76
174 3300032002 Ga0307416_102950556 Ga0307416_1029505562 76
175 3300032002 Ga0307416_103067267 Ga0307416_1030672672 76
176 3300032002 Ga0307416_103407468 Ga0307416_1034074682 76
177 3300032004 Ga0307414_11237790 Ga0307414_112377902 76
178 3300032004 Ga0307414_11658144 Ga0307414_116581442 76
179 3300032005 Ga0307411_11721503 Ga0307411_117215031 76
180 3300032126 Ga0307415_100221325 Ga0307415_1002213252 76
181 3300041413 Ga0439465_0381213 Ga0439465_0381213_195_440 76
182 3300041451 Ga0451791_0584919 Ga0451791_0584919_236_466 76
183 3300041456 Ga0451795_0896892 Ga0451795_0896892_201_449 76
184 3300041486 Ga0451807_2580041 Ga0451807_2580041_356_589 76
185 3300041498 Ga0451841_1195529 Ga0451841_1195529_142_381 76
186 3300041501 Ga0451845_0422137 Ga0451845_0422137_44_283 76
187 3300041505 Ga0451849_1435203 Ga0451849_1435203_161_397 76
188 3300041512 Ga0451853_0475137 Ga0451853_0475137_128_397 76
189 3300041512 Ga0451853_0600491 Ga0451853_0600491_345_575 76
190 3300044683 Ga0466965_0038695 Ga0466965_0038695_1476_1706 76
191 3300044735 Ga0466968_0036457 Ga0466968_0036457_390_620 76
192 3300044765 Ga0466970_0205888 Ga0466970_0205888_303_533 76
193 3300044842 Ga0466957_0277716 Ga0466957_0277716_849_1079 76
194 3300046471 Ga0495650_0002011 Ga0495650_0002011_13750_13980 76
195 3300047469 Ga0495673_0334700 Ga0495673_0334700_148_408 76
196 3300047472 Ga0495686_0157189 Ga0495686_0157189_154_396 76
197 3300048905 Ga0496102_0241514 Ga0496102_0241514_64_312 76
198 3300048912 Ga0496109_0701959 Ga0496109_0701959_368_616 76
199 3300048914 Ga0496111_0058558 Ga0496111_0058558_567_797 76
200 3300048917 Ga0496114_0023803 Ga0496114_0023803_2243_2473 76
201 3300048917 Ga0496114_0360325 Ga0496114_0360325_226_456 76
202 3300048917 Ga0496114_1053900 Ga0496114_1053900_304_537 76
203 3300048920 Ga0496117_0000070 Ga0496117_0000070_67088_67321 76
204 3300048920 Ga0496117_0005093 Ga0496117_0005093_1062_1292 76
205 3300048920 Ga0496117_0066068 Ga0496117_0066068_1069_1308 76
206 3300048921 Ga0496118_0012992 Ga0496118_0012992_7043_7282 76
207 3300048921 Ga0496118_0015184 Ga0496118_0015184_1878_2108 76
208 3300048922 Ga0496119_0000888 Ga0496119_0000888_3485_3715 76
209 3300048922 Ga0496119_0007300 Ga0496119_0007300_8479_8730 76
210 3300048922 Ga0496119_0010210 Ga0496119_0010210_845_1084 76
211 3300048922 Ga0496119_0194466 Ga0496119_0194466_302_541 76
212 3300048923 Ga0496120_0000356 Ga0496120_0000356_17072_17311 76
213 3300048923 Ga0496120_0000462 Ga0496120_0000462_63766_64017 76
214 3300048923 Ga0496120_0002774 Ga0496120_0002774_70_303 76
215 3300048923 Ga0496120_0068457 Ga0496120_0068457_1429_1659 76
216 3300048925 Ga0496122_0000105 Ga0496122_0000105_39341_39571 76
217 3300048926 Ga0496123_0000075 Ga0496123_0000075_154946_155176 76
218 3300048926 Ga0496123_0007463 Ga0496123_0007463_785_1018 76
219 3300048926 Ga0496123_0301123 Ga0496123_0301123_97_336 76
220 3300048927 Ga0496124_0026429 Ga0496124_0026429_260_493 76
221 3300048928 Ga0496125_0065680 Ga0496125_0065680_2066_2299 76
222 3300048928 Ga0496125_0163274 Ga0496125_0163274_256_486 76
223 3300048929 Ga0496126_0008993 Ga0496126_0008993_10349_10582 76
224 3300048929 Ga0496126_0009653 Ga0496126_0009653_418_657 76
225 3300048929 Ga0496126_0088440 Ga0496126_0088440_1561_1791 76
226 3300048929 Ga0496126_0293769 Ga0496126_0293769_300_539 76
227 3300048929 Ga0496126_0442511 Ga0496126_0442511_492_722 76
228 3300048929 Ga0496126_0646965 Ga0496126_0646965_293_529 76
229 3300048929 Ga0496126_1163278 Ga0496126_1163278_147_377 76
230 3300048929 Ga0496126_1388723 Ga0496126_1388723_114_383 76
231 3300049571 Ga0501034_0063808 Ga0501034_0063808_759_998 76
232 3300049571 Ga0501034_0178801 Ga0501034_0178801_885_1127 76
233 3300049572 Ga0501036_0108494 Ga0501036_0108494_350_589 76
234 3300049572 Ga0501036_1548650 Ga0501036_1548650_51_284 76
235 3300049573 Ga0501037_0026190 Ga0501037_0026190_296_535 76
236 3300049573 Ga0501037_0340712 Ga0501037_0340712_673_912 76
237 3300049574 Ga0501038_0965424 Ga0501038_0965424_172_405 76
238 3300049575 Ga0501039_1166815 Ga0501039_1166815_28_261 76
239 3300049577 Ga0501041_0979411 Ga0501041_0979411_180_410 76
240 3300049579 Ga0501043_0091734 Ga0501043_0091734_905_1144 76
241 3300049579 Ga0501043_0117752 Ga0501043_0117752_1283_1522 76
242 3300049580 Ga0501046_0246863 Ga0501046_0246863_163_402 76
243 3300049581 Ga0501047_0014026 Ga0501047_0014026_2198_2437 76
244 3300049581 Ga0501047_0025061 Ga0501047_0025061_811_1050 76
245 3300049583 Ga0501067_0471721 Ga0501067_0471721_34_267 76
246 3300049586 Ga0501070_0004545 Ga0501070_0004545_4473_4712 76
247 3300049586 Ga0501070_0046771 Ga0501070_0046771_1973_2206 76
248 3300049586 Ga0501070_0762850 Ga0501070_0762850_366_605 76
249 3300049586 Ga0501070_1399259 Ga0501070_1399259_253_486 76
250 3300049588 Ga0501072_1451073 Ga0501072_1451073_34_315 76
251 3300049589 Ga0501073_0000216 Ga0501073_0000216_9362_9595 76
252 3300049589 Ga0501073_0013187 Ga0501073_0013187_4893_5132 76
253 3300049590 Ga0501074_0258619 Ga0501074_0258619_55_288 76
254 3300049590 Ga0501074_0305983 Ga0501074_0305983_397_636 76
255 3300049592 Ga0501076_0291173 Ga0501076_0291173_611_892 76
256 3300049742 Ga0501080_0000040 Ga0501080_0000040_23434_23673 76
257 3300049742 Ga0501080_0064428 Ga0501080_0064428_1269_1502 76
258 3300049744 Ga0501083_0137603 Ga0501083_0137603_527_766 76
259 3300049822 Ga0501035_0002344 Ga0501035_0002344_8334_8573 76
260 3300049823 Ga0501044_0004140 Ga0501044_0004140_5541_5780 76
261 3300049824 Ga0501045_0504555 Ga0501045_0504555_576_815 76
262 3300050491 nmdc:mga00v17_169187_c1 nmdc:mga00v17_169187_c1_667_906 76
263 3300050511 nmdc:mga08y16_1375371_c1 nmdc:mga08y16_1375371_c1_245_493 76
264 3300053104 Ga0500556_0000145 Ga0500556_0000145_8703_8933 76
265 3300053108 Ga0500562_003787 Ga0500562_003787_2064_2297 76
266 3300053117 Ga0500593_011564 Ga0500593_011564_3087_3317 76
267 3300053133 Ga0500655_001961 Ga0500655_001961_3106_3336 76
268 3300053136 Ga0500559_0000303 Ga0500559_0000303_29418_29648 76
269 3300053140 Ga0500573_0003192 Ga0500573_0003192_5702_5935 76
270 3300053140 Ga0500573_0035429 Ga0500573_0035429_1084_1314 76
271 3300053140 Ga0500573_0101347 Ga0500573_0101347_1210_1440 76
272 3300053142 Ga0500577_0276389 Ga0500577_0276389_463_696 76
273 3300053142 Ga0500577_0366947 Ga0500577_0366947_201_443 76
274 3300053148 Ga0500590_088864 Ga0500590_088864_699_950 76
275 3300053153 Ga0500616_0000192 Ga0500616_0000192_28333_28569 76
276 3300053153 Ga0500616_0058447 Ga0500616_0058447_498_728 76
277 3300054114 Ga0501084_0174108 Ga0501084_0174108_1287_1526 76
278 3300060353 Ga0501082_0686907 Ga0501082_0686907_265_504 76
279 3300060353 Ga0501082_1687103 Ga0501082_1687103_29_262 76

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13443

HTH_26

Cro/C1-type HTH DNA-binding domain

15

76

0.98

PF01381

HTH_3

Helix-turn-helix

16

71

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zvh-assembly1.cif.gz_i edf1-ribosome complex 0.9139 17 68
2xj3-assembly1.cif.gz_B high resolution structure of the t55c mutant of cylr2. 0.9096 14 71
4ghj-assembly1.cif.gz_A 1.75 angstrom crystal structure of transcriptional regulator ftom vibrio vulnificus. 0.9077 15 65
3rzz-assembly1.cif.gz_A-2 structure of hydroxyethylphoshphonate dioxygenase y98f mutant 0.8942 16 71
1x57-assembly1.cif.gz_A solution structures of the hth domain of human edf-1 protein 0.8864 17 64
ID Description Score Start End Superfamily
1x57A00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8864 17 64 1.10.260.40
2lykB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8857 12 72 1.10.260.40
4fbiC00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8804 17 67 1.10.260.40
4ghjA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8804 15 65 1.10.260.40
1r63A00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8798 15 71 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A3N5VGM7-F1-model_v4 XRE family transcriptional regulator 0.9623 12 75 GO:0003677
AF-G1V204-F1-model_v4 HTH cro/C1-type domain-containing protein 0.9601 12 73 GO:0003677
AF-A0A7W8C2C6-F1-model_v4 DNA-binding Xre family transcriptional regulator 0.9491 12 73 GO:0003677
AF-A0A6L4ZN70-F1-model_v4 Cro/Cl family transcriptional regulator 0.9474 12 76 GO:0003677
AF-A0A3N5W8D3-F1-model_v4 XRE family transcriptional regulator 0.9428 11 71 GO:0003677

Feature Viewer

pLDDT pTM Quality
80.86 0.6 Medium
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Predicted Structure (AlphaFold2)

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