F381896

General Info

Members Datasets Scaffolds Average Seq Length
277 157 277 424

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0016800|Ga0395899_0016800_2438_3790
Length 450
Sequence MVYFTYDLATYVICRMHNNNEGDFVMNDDIVAGLIAGEENREREGLELIPSENYVSRDVLMALGSVFTNKYSEGYPGRRYYGGQEFTDQVEQLAIDRAKQLFGADHANVQPHSGAPANEAVYSAWLEPGDTVLAMDLSHGGHLTHGAPVTRSAHLYNFIRYKMKDVTTGEIDYDELRRLALEHRPKIILAGFSAYPRELDYAKFAAIGNEVGALLMADMAHIAGLIAGGVAKNPFDYGFHVITTTTHKTLRGPRGGLILSKGKVGNPLKAPEKTIENIPTLIDRSIFPGMQGGPHMHVIAAKAVAFGEALQPEFKQYAQQIVKNAAVLADELQKRGFQLVGGGTSNHLILADVYKSFGINGKEVEIALDKIGLTLNANAVADDPLPPFRPSGIRLGTPAITTRGLREEHMVQIAEWIKQAIDSRDDDAALARLCDEVKQFTTQFPLPSDK

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
92 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
95 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
96 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
108 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
109 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
110 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
111 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
140 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
141 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
142 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
143 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
144 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
145 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
146 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
147 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
148 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
149 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
150 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
151 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
152 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
153 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
156 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.25
Nodule 0
Rhizoplane 0.72
Rhizosphere 80.51
Stem 0
Stem Tuber 0
Unclassified 2.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10021771 3300001989 Bacteria 2278
2 JGI24735J21928_10000124 3300002067 Bacteria 28380
3 JGI24738J21930_10003528 3300002075 Bacteria 3937
4 rootH1_10009329 3300003316 Bacteria 46993
5 rootL2_10191205 3300003322 Bacteria 1996
6 rootH1_10065833 3300003323 Bacteria 23418
7 Ga0070658_10000061 3300005327 Bacteria 108607
8 Ga0070658_10000110 3300005327 Bacteria 73137
9 Ga0070658_10000446 3300005327 Bacteria 35716
10 Ga0070658_10001410 3300005327 Bacteria 20540
11 Ga0070658_10001966 3300005327 Bacteria 17286
12 Ga0070658_10003460 3300005327 Bacteria 12979
13 Ga0070658_10007641 3300005327 Bacteria 8715
14 Ga0070658_10009361 3300005327 Bacteria 7871
15 Ga0070658_10112949 3300005327 Bacteria 2252
16 Ga0070683_100003953 3300005329 Bacteria 12130
17 Ga0070666_10021820 3300005335 Bacteria 4151
18 Ga0070680_100008573 3300005336 Bacteria 7833
19 Ga0070660_100000072 3300005339 Bacteria 60251
20 Ga0070660_100003583 3300005339 Bacteria 10717
21 Ga0070660_100010893 3300005339 Bacteria 6436
22 Ga0070660_100196242 3300005339 Bacteria 1636
23 Ga0070692_10062084 3300005345 Bacteria 1971
24 Ga0070671_100000001 3300005355 Bacteria 1228151
25 Ga0070673_100000135 3300005364 Bacteria 35068
26 Ga0070659_100032219 3300005366 Bacteria 4064
27 Ga0070659_100051998 3300005366 Bacteria 3221
28 Ga0070667_100000001 3300005367 Bacteria 1108638
29 Ga0070667_100160394 3300005367 Bacteria 1980
30 Ga0070678_100004714 3300005456 Bacteria 7767
31 Ga0070662_100051006 3300005457 Bacteria 2986
32 Ga0070681_10025903 3300005458 Bacteria 5896
33 Ga0070685_10000450 3300005466 Bacteria 23865
34 Ga0070685_10003323 3300005466 Bacteria 8178
35 Ga0070679_100001023 3300005530 Bacteria 24378
36 Ga0070679_100006138 3300005530 Bacteria 11180
37 Ga0070679_100013016 3300005530 Bacteria 7967
38 Ga0070679_100018208 3300005530 Bacteria 6812
39 Ga0070686_100062727 3300005544 Bacteria 2405
40 Ga0070665_100026877 3300005548 Bacteria 5797
41 Ga0070665_100102050 3300005548 Bacteria 2872
42 Ga0068855_100000002 3300005563 Bacteria 616881
43 Ga0068855_100001904 3300005563 Bacteria 25898
44 Ga0068855_100006816 3300005563 Bacteria 13857
45 Ga0068855_100031384 3300005563 Bacteria 6345
46 Ga0068855_100069271 3300005563 Bacteria 4105
47 Ga0070664_100000291 3300005564 Bacteria 36284
48 Ga0070664_100091058 3300005564 Bacteria 2640
49 Ga0068857_100000057 3300005577 Bacteria 62388
50 Ga0068857_100000066 3300005577 Bacteria 59014
51 Ga0068857_100024105 3300005577 Bacteria 5356
52 Ga0068856_100000029 3300005614 Bacteria 130205
53 Ga0068856_100000122 3300005614 Bacteria 78134
54 Ga0068856_100083674 3300005614 Unclassified 3169
55 Ga0068852_100000001 3300005616 Bacteria 716526
56 Ga0068852_100000011 3300005616 Bacteria 141147
57 Ga0068852_100252019 3300005616 Bacteria 1691
58 Ga0068858_100005981 3300005842 Bacteria 11883
59 Ga0068858_100113533 3300005842 Bacteria 2530
60 Ga0068860_100034173 3300005843 Bacteria 4876
61 Ga0068860_100137359 3300005843 Bacteria 2348
62 Ga0081455_10000008 3300005937 Bacteria 256558
63 Ga0081539_10018113 3300005985 Bacteria 4905
64 Ga0075365_10000008 3300006038 Bacteria 114620
65 Ga0075365_10000013 3300006038 Bacteria 80137
66 Ga0075365_10000219 3300006038 Bacteria 19286
67 Ga0075365_10001237 3300006038 Bacteria 11305
68 Ga0075365_10022357 3300006038 Bacteria 3962
69 Ga0075364_10000767 3300006051 Bacteria 16873
70 Ga0075364_10038631 3300006051 Bacteria 3092
71 Ga0075362_10043026 3300006177 Bacteria 1999
72 Ga0075367_10039979 3300006178 Bacteria 2737
73 Ga0075370_10006039 3300006353 Bacteria 6067
74 Ga0068865_100025464 3300006881 Bacteria 3892
75 Ga0105240_10000003 3300009093 Bacteria 1183681
76 Ga0105240_10002413 3300009093 Bacteria 30045
77 Ga0105240_10011162 3300009093 Bacteria 12545
78 Ga0105245_10000034 3300009098 Bacteria 147951
79 Ga0105245_10008284 3300009098 Bacteria 9083
80 Ga0105243_10000001 3300009148 Bacteria 1156578
81 Ga0105243_10004335 3300009148 Bacteria 11237
82 Ga0105241_10051453 3300009174 Bacteria 3141
83 Ga0105242_10000001 3300009176 Bacteria 574039
84 Ga0105248_10156889 3300009177 Bacteria 2568
85 Ga0105237_10000002 3300009545 Bacteria 702357
86 Ga0105237_10008870 3300009545 Bacteria 10838
87 Ga0105238_10008978 3300009551 Bacteria 10006
88 Ga0105028_100115 3300009993 Bacteria 8314
89 Ga0105239_10000960 3300010375 Bacteria 40541
90 Ga0105239_10001938 3300010375 Bacteria 27016
91 Ga0105239_10030374 3300010375 Bacteria 5941
92 Ga0105239_10050693 3300010375 Bacteria 4552
93 Ga0105239_10054692 3300010375 Bacteria 4379
94 Ga0105246_10004917 3300011119 Bacteria 8144
95 Ga0105246_10006146 3300011119 Bacteria 7326
96 Ga0105246_10007113 3300011119 Bacteria 6850
97 Ga0157373_10001445 3300013100 Bacteria 18148
98 Ga0157371_10009748 3300013102 Bacteria 7536
99 Ga0157371_10105098 3300013102 Bacteria 2003
100 Ga0157371_10138975 3300013102 Bacteria 1730
101 Ga0157370_10002614 3300013104 Bacteria 21656
102 Ga0157370_10058258 3300013104 Bacteria 3672
103 Ga0157369_10000003 3300013105 Bacteria 507337
104 Ga0157369_10000026 3300013105 Bacteria 216023
105 Ga0157369_10037483 3300013105 Bacteria 5308
106 Ga0157369_10291386 3300013105 Bacteria 1699
107 Ga0157374_10002366 3300013296 Bacteria 15886
108 Ga0157374_10003834 3300013296 Bacteria 12625
109 Ga0157374_10063345 3300013296 Bacteria 3468
110 Ga0157372_10000106 3300013307 Bacteria 87935
111 Ga0157372_10020931 3300013307 Bacteria 7060
112 Ga0163163_10101043 3300014325 Bacteria 2906
113 Ga0157377_10000372 3300014745 Bacteria 20058
114 Ga0157376_10000001 3300014969 Bacteria 842910
115 Ga0157376_10000308 3300014969 Bacteria 32792
116 Ga0207688_10111263 3300025901 Bacteria 1590
117 Ga0207680_10013101 3300025903 Bacteria 4247
118 Ga0207680_10102201 3300025903 Bacteria 1844
119 Ga0207647_10006649 3300025904 Bacteria 8400
120 Ga0207705_10000010 3300025909 Bacteria 518023
121 Ga0207705_10000011 3300025909 Bacteria 517768
122 Ga0207705_10005404 3300025909 Bacteria 9556
123 Ga0207705_10019970 3300025909 Bacteria 4791
124 Ga0207705_10032742 3300025909 Bacteria 3715
125 Ga0207705_10039945 3300025909 Bacteria 3363
126 Ga0207705_10092150 3300025909 Bacteria 2220
127 Ga0207654_10028324 3300025911 Bacteria 3053
128 Ga0207707_10019578 3300025912 Bacteria 5907
129 Ga0207707_10283757 3300025912 Bacteria 1434
130 Ga0207695_10000005 3300025913 Bacteria 1196715
131 Ga0207695_10011090 3300025913 Bacteria 10943
132 Ga0207671_10000008 3300025914 Bacteria 798229
133 Ga0207671_10010876 3300025914 Bacteria 7464
134 Ga0207657_10000669 3300025919 Bacteria 36492
135 Ga0207657_10001623 3300025919 Bacteria 24212
136 Ga0207657_10061773 3300025919 Bacteria 3210
137 Ga0207649_10129202 3300025920 Bacteria 1714
138 Ga0207652_10000562 3300025921 Bacteria 37499
139 Ga0207652_10003522 3300025921 Bacteria 12908
140 Ga0207652_10046826 3300025921 Bacteria 3692
141 Ga0207652_10120521 3300025921 Bacteria 2334
142 Ga0207652_10125026 3300025921 Bacteria 2290
143 Ga0207694_10002042 3300025924 Bacteria 16716
144 Ga0207687_10000365 3300025927 Bacteria 30197
145 Ga0207687_10018337 3300025927 Bacteria 4617
146 Ga0207644_10000001 3300025931 Bacteria 1243214
147 Ga0207690_10018111 3300025932 Bacteria 4316
148 Ga0207690_10190367 3300025932 Bacteria 1551
149 Ga0207706_10001362 3300025933 Bacteria 24431
150 Ga0207686_10000001 3300025934 Bacteria 1169580
151 Ga0207709_10000002 3300025935 Bacteria 1171536
152 Ga0207669_10000342 3300025937 Bacteria 21222
153 Ga0207704_10008000 3300025938 Bacteria 5029
154 Ga0207711_10153153 3300025941 Bacteria 2082
155 Ga0207661_10003471 3300025944 Bacteria 10952
156 Ga0207679_10000126 3300025945 Bacteria 62566
157 Ga0207667_10000005 3300025949 Bacteria 715503
158 Ga0207667_10003450 3300025949 Bacteria 19517
159 Ga0207667_10015601 3300025949 Bacteria 8619
160 Ga0207651_10005851 3300025960 Bacteria 6356
161 Ga0207658_10000003 3300025986 Bacteria 1151934
162 Ga0207658_10111545 3300025986 Bacteria 2163
163 Ga0207703_10011085 3300026035 Bacteria 7023
164 Ga0207703_10132781 3300026035 Bacteria 2152
165 Ga0207702_10000051 3300026078 Bacteria 139040
166 Ga0207702_10000549 3300026078 Bacteria 41892
167 Ga0207674_10000015 3300026116 Bacteria 183445
168 Ga0207674_10000032 3300026116 Bacteria 142389
169 Ga0207674_10000299 3300026116 Bacteria 62812
170 Ga0207674_10056294 3300026116 Bacteria 3994
171 Ga0207683_10022580 3300026121 Bacteria 5402
172 Ga0207698_10000001 3300026142 Bacteria 625389
173 Ga0207698_10000915 3300026142 Bacteria 17154
174 Ga0207698_10008480 3300026142 Bacteria 6504
175 Ga0268266_10000826 3300028379 Bacteria 40531
176 Ga0268266_10009766 3300028379 Bacteria 8442
177 Ga0265337_1004410 3300028556 Bacteria 5844
178 Ga0265334_10000619 3300028573 Bacteria 17854
179 Ga0265338_10000060 3300028800 Bacteria 197991
180 Ga0265338_10007849 3300028800 Bacteria 13111
181 Ga0265338_10043938 3300028800 Bacteria 4134
182 Ga0316179_1000592 3300030734 Bacteria 21809
183 Ga0316181_1097946 3300030744 Bacteria 38057
184 Ga0316182_1040641 3300030745 Bacteria 16566
185 Ga0265320_10003025 3300031240 Bacteria 11437
186 Ga0265340_10000025 3300031247 Bacteria 71465
187 Ga0265327_10000025 3300031251 Bacteria 380054
188 Ga0307509_10086876 3300031507 Bacteria 3215
189 Ga0307406_10000001 3300031901 Bacteria 638191
190 Ga0395899_0016800 3300037312 Bacteria 5579
191 Ga0395899_0022882 3300037312 Bacteria 4735
192 Ga0395899_0074820 3300037312 Bacteria 2474
193 Ga0395900_0000001 3300037418 Bacteria 931146
194 Ga0395900_0031872 3300037418 Bacteria 5418
195 Ga0395900_0059147 3300037418 Bacteria 3945
196 Ga0395900_0110085 3300037418 Bacteria 2830
197 Ga0395900_0140542 3300037418 Bacteria 2473
198 Ga0395898_0000002 3300037466 Bacteria 931013
199 Ga0395905_0000943 3300037471 Bacteria 37400
200 Ga0395905_0007335 3300037471 Bacteria 10985
201 Ga0395901_0000006 3300038443 Bacteria 514112
202 Ga0395901_0001790 3300038443 Bacteria 22159
203 Ga0395901_0018420 3300038443 Bacteria 7127
204 Ga0395901_0071713 3300038443 Bacteria 3610
205 Ga0400489_83373 3300039093 Archaea 14574
206 Ga0451807_2191970 3300041486 Bacteria 5054
207 Ga0439445_0002815 3300042004 Bacteria 3886
208 Ga0439446_0000003 3300042156 Bacteria 158513
209 Ga0439464_0000005 3300042439 Bacteria 45669
210 Ga0466965_0001769 3300044683 Bacteria 8927
211 Ga0453684_0099946 3300044712 Bacteria 3552
212 Ga0495638_0000061 3300046460 Bacteria 188551
213 Ga0495672_0000010 3300047320 Bacteria 545038
214 Ga0495686_0017556 3300047472 Bacteria 4815
215 Ga0496115_0000001 3300048918 Bacteria 367230
216 Ga0496124_0056616 3300048927 Bacteria 3306
217 Ga0496124_0143342 3300048927 Bacteria 1883
218 Ga0501031_0000291 3300049568 Bacteria 28536
219 Ga0501031_0001813 3300049568 Bacteria 13426
220 Ga0501032_0001512 3300049569 Bacteria 18574
221 Ga0501032_0131340 3300049569 Bacteria 1652
222 Ga0501034_0000024 3300049571 Bacteria 263735
223 Ga0501034_0007799 3300049571 Bacteria 11389
224 Ga0501034_0025764 3300049571 Bacteria 5989
225 Ga0501034_0125854 3300049571 Bacteria 2548
226 Ga0501036_0010730 3300049572 Bacteria 7574
227 Ga0501037_0000138 3300049573 Bacteria 68040
228 Ga0501037_0003407 3300049573 Bacteria 11560
229 Ga0501038_0017734 3300049574 Bacteria 6434
230 Ga0501038_0035471 3300049574 Bacteria 4379
231 Ga0501042_0025363 3300049578 Bacteria 4163
232 Ga0501043_0000062 3300049579 Bacteria 95664
233 Ga0501046_0000059 3300049580 Bacteria 126801
234 Ga0501046_0017676 3300049580 Bacteria 5946
235 Ga0501047_0000032 3300049581 Bacteria 208294
236 Ga0501048_0001836 3300049582 Bacteria 16122
237 Ga0501070_0242587 3300049586 Bacteria 1475
238 Ga0501073_0058794 3300049589 Bacteria 2686
239 Ga0501035_0000988 3300049822 Bacteria 30078
240 Ga0501035_0001735 3300049822 Bacteria 22038
241 Ga0501044_0012395 3300049823 Bacteria 9230
242 nmdc:mga03683_26554_c1 3300050489 Bacteria 2285
243 nmdc:mga00v17_23463_c1 3300050491 Bacteria 3568
244 nmdc:mga00v17_8517_c1 3300050491 Bacteria 5519
245 nmdc:mga0yw44_17_c1 3300050492 Bacteria 74504
246 nmdc:mga0yw44_1_c1 3300050492 Bacteria 702221
247 nmdc:mga0yw44_328_c1 3300050492 Bacteria 16644
248 nmdc:mga0yw44_82750_c1 3300050492 Bacteria 2014
249 nmdc:mga0yw44_8_c1 3300050492 Bacteria 237802
250 nmdc:mga0k408_14884_c1 3300050493 Bacteria 4294
251 nmdc:mga0k408_428_c1 3300050493 Bacteria 22988
252 nmdc:mga07m45_10988_c1 3300050496 Bacteria 4745
253 Ga0500643_000022 3300053087 Bacteria 277519
254 Ga0500643_000034 3300053087 Bacteria 185705
255 Ga0500643_025763 3300053087 Unclassified 1851
256 Ga0500644_0003450 3300053088 Bacteria 3911
257 Ga0500646_0000368 3300053090 Bacteria 13641
258 Ga0500651_0000011 3300053093 Bacteria 246573
259 Ga0500651_0000094 3300053093 Bacteria 55423
260 Ga0500651_0016637 3300053093 Bacteria 4528
261 Ga0500650_0000001 3300053098 Bacteria 818797
262 Ga0500555_000009 3300053103 Bacteria 263998
263 Ga0500562_000001 3300053108 Bacteria 1178987
264 Ga0500569_000001 3300053109 Bacteria 137852
265 Ga0500593_000001 3300053117 Bacteria 784404
266 Ga0500594_0000001 3300053118 Bacteria 1178472
267 Ga0500614_000501 3300053123 Bacteria 10221
268 Ga0500655_000273 3300053133 Bacteria 12034
269 Ga0500655_001898 3300053133 Bacteria 3888
270 Ga0500655_002204 3300053133 Bacteria 3584
271 Ga0500577_0002683 3300053142 Bacteria 4564
272 Ga0500579_002268 3300053143 Bacteria 11337
273 Ga0500588_0000037 3300053146 Bacteria 26282
274 Ga0500616_0000005 3300053153 Bacteria 961725
275 Ga0500633_0001960 3300053160 Bacteria 4087
276 Ga0500570_000012 3300053724 Bacteria 72515
277 Ga0501082_0028875 3300060353 Bacteria 4779

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048918 Ga0496115_0000001 Ga0496115_0000001_75871_77094 377
2 3300038443 Ga0395901_0001790 Ga0395901_0001790_11993_13282 386
3 3300053087 Ga0500643_000022 Ga0500643_000022_256769_258043 386
4 3300053093 Ga0500651_0016637 Ga0500651_0016637_3100_4380 387
5 3300050491 nmdc:mga00v17_23463_c1 nmdc:mga00v17_23463_c1_54_1220 388
6 3300031901 Ga0307406_10000001 Ga0307406_10000001313 391
7 3300053133 Ga0500655_001898 Ga0500655_001898_735_1952 391
8 3300014969 Ga0157376_10000001 Ga0157376_10000001553 395
9 3300009098 Ga0105245_10008284 Ga0105245_1000828410 396
10 3300013105 Ga0157369_10291386 Ga0157369_102913861 396
11 3300025927 Ga0207687_10018337 Ga0207687_100183374 396
12 3300049568 Ga0501031_0000291 Ga0501031_0000291_25001_26260 400
13 3300049569 Ga0501032_0131340 Ga0501032_0131340_161_1420 400
14 3300049571 Ga0501034_0125854 Ga0501034_0125854_150_1409 400
15 3300049573 Ga0501037_0003407 Ga0501037_0003407_4221_5480 400
16 3300049574 Ga0501038_0017734 Ga0501038_0017734_1768_3027 400
17 3300049578 Ga0501042_0025363 Ga0501042_0025363_2831_4090 400
18 3300049822 Ga0501035_0000988 Ga0501035_0000988_12296_13555 400
19 3300009993 Ga0105028_100115 Ga0105028_1001159 406
20 3300039093 Ga0400489_83373 Ga0400489_83373_871_2109 407
21 3300049571 Ga0501034_0007799 Ga0501034_0007799_1855_3138 410
22 3300053117 Ga0500593_000001 Ga0500593_000001_778592_779869 410
23 3300005842 Ga0068858_100005981 Ga0068858_1000059819 411
24 3300026035 Ga0207703_10011085 Ga0207703_100110859 411
25 3300042156 Ga0439446_0000003 Ga0439446_0000003_99223_100494 412
26 3300049580 Ga0501046_0017676 Ga0501046_0017676_4351_5610 412
27 3300005327 Ga0070658_10001966 Ga0070658_1000196618 414
28 3300005345 Ga0070692_10062084 Ga0070692_100620842 414
29 3300005366 Ga0070659_100051998 Ga0070659_1000519984 414
30 3300005563 Ga0068855_100001904 Ga0068855_10000190421 414
31 3300025909 Ga0207705_10039945 Ga0207705_100399452 414
32 3300025921 Ga0207652_10046826 Ga0207652_100468263 414
33 3300025932 Ga0207690_10190367 Ga0207690_101903672 414
34 3300025949 Ga0207667_10003450 Ga0207667_1000345013 414
35 3300026116 Ga0207674_10000015 Ga0207674_1000001583 414
36 3300005458 Ga0070681_10025903 Ga0070681_100259032 415
37 3300025912 Ga0207707_10019578 Ga0207707_100195785 415
38 3300053108 Ga0500562_000001 Ga0500562_000001_1094664_1095941 416
39 3300053133 Ga0500655_002204 Ga0500655_002204_173_1450 416
40 3300053087 Ga0500643_025763 Ga0500643_025763_41_1315 418
41 3300053142 Ga0500577_0002683 Ga0500577_0002683_1484_2764 418
42 3300053153 Ga0500616_0000005 Ga0500616_0000005_126563_127837 418
43 3300003323 rootH1_10065833 rootH1_1006583315 419
44 3300005327 Ga0070658_10000110 Ga0070658_100001102 419
45 3300006038 Ga0075365_10022357 Ga0075365_100223571 419
46 3300025909 Ga0207705_10032742 Ga0207705_100327422 419
47 3300030744 Ga0316181_1097946 Ga0316181_10979466 419
48 3300037418 Ga0395900_0031872 Ga0395900_0031872_1792_3069 419
49 3300038443 Ga0395901_0071713 Ga0395901_0071713_193_1470 419
50 3300050492 nmdc:mga0yw44_82750_c1 nmdc:mga0yw44_82750_c1_653_1939 419
51 3300053093 Ga0500651_0000011 Ga0500651_0000011_2426_3706 419
52 3300053123 Ga0500614_000501 Ga0500614_000501_8608_9888 419
53 3300005327 Ga0070658_10007641 Ga0070658_100076417 420
54 3300050496 nmdc:mga07m45_10988_c1 nmdc:mga07m45_10988_c1_730_2022 420
55 3300013296 Ga0157374_10003834 Ga0157374_100038347 421
56 3300037471 Ga0395905_0007335 Ga0395905_0007335_8160_9443 421
57 3300003316 rootH1_10009329 rootH1_1000932950 425
58 3300005327 Ga0070658_10001410 Ga0070658_1000141025 425
59 3300005327 Ga0070658_10009361 Ga0070658_100093618 425
60 3300005339 Ga0070660_100000072 Ga0070660_10000007220 425
61 3300005355 Ga0070671_100000001 Ga0070671_100000001934 425
62 3300005367 Ga0070667_100000001 Ga0070667_100000001352 425
63 3300005367 Ga0070667_100160394 Ga0070667_1001603943 425
64 3300005466 Ga0070685_10003323 Ga0070685_100033236 425
65 3300005530 Ga0070679_100001023 Ga0070679_10000102316 425
66 3300005530 Ga0070679_100006138 Ga0070679_10000613810 425
67 3300005530 Ga0070679_100018208 Ga0070679_1000182084 425
68 3300005544 Ga0070686_100062727 Ga0070686_1000627271 425
69 3300005548 Ga0070665_100102050 Ga0070665_1001020502 425
70 3300005563 Ga0068855_100000002 Ga0068855_100000002396 425
71 3300005563 Ga0068855_100031384 Ga0068855_1000313842 425
72 3300005563 Ga0068855_100069271 Ga0068855_1000692713 425
73 3300005577 Ga0068857_100000057 Ga0068857_10000005764 425
74 3300005577 Ga0068857_100024105 Ga0068857_1000241052 425
75 3300005616 Ga0068852_100000001 Ga0068852_100000001355 425
76 3300005616 Ga0068852_100252019 Ga0068852_1002520192 425
77 3300005843 Ga0068860_100034173 Ga0068860_1000341735 425
78 3300005843 Ga0068860_100137359 Ga0068860_1001373593 425
79 3300005937 Ga0081455_10000008 Ga0081455_10000008149 425
80 3300005985 Ga0081539_10018113 Ga0081539_100181137 425
81 3300006038 Ga0075365_10000008 Ga0075365_10000008127 425
82 3300006038 Ga0075365_10000013 Ga0075365_1000001310 425
83 3300006038 Ga0075365_10000219 Ga0075365_100002195 425
84 3300006038 Ga0075365_10001237 Ga0075365_100012377 425
85 3300006051 Ga0075364_10000767 Ga0075364_1000076713 425
86 3300006177 Ga0075362_10043026 Ga0075362_100430262 425
87 3300009093 Ga0105240_10002413 Ga0105240_1000241321 425
88 3300009093 Ga0105240_10011162 Ga0105240_100111629 425
89 3300009148 Ga0105243_10004335 Ga0105243_100043359 425
90 3300009174 Ga0105241_10051453 Ga0105241_100514532 425
91 3300009177 Ga0105248_10156889 Ga0105248_101568892 425
92 3300009545 Ga0105237_10000002 Ga0105237_10000002252 425
93 3300009551 Ga0105238_10008978 Ga0105238_100089789 425
94 3300010375 Ga0105239_10050693 Ga0105239_100506936 425
95 3300010375 Ga0105239_10054692 Ga0105239_100546922 425
96 3300013102 Ga0157371_10009748 Ga0157371_100097483 425
97 3300013102 Ga0157371_10138975 Ga0157371_101389752 425
98 3300013105 Ga0157369_10000003 Ga0157369_10000003365 425
99 3300013307 Ga0157372_10000106 Ga0157372_1000010664 425
100 3300013307 Ga0157372_10020931 Ga0157372_100209318 425
101 3300014325 Ga0163163_10101043 Ga0163163_101010432 425
102 3300025903 Ga0207680_10013101 Ga0207680_100131014 425
103 3300025909 Ga0207705_10000011 Ga0207705_100000111 425
104 3300025909 Ga0207705_10019970 Ga0207705_100199704 425
105 3300025911 Ga0207654_10028324 Ga0207654_100283242 425
106 3300025912 Ga0207707_10283757 Ga0207707_102837571 425
107 3300025913 Ga0207695_10011090 Ga0207695_100110909 425
108 3300025914 Ga0207671_10000008 Ga0207671_10000008354 425
109 3300025919 Ga0207657_10000669 Ga0207657_1000066929 425
110 3300025921 Ga0207652_10000562 Ga0207652_1000056244 425
111 3300025921 Ga0207652_10003522 Ga0207652_100035228 425
112 3300025921 Ga0207652_10125026 Ga0207652_101250261 425
113 3300025924 Ga0207694_10002042 Ga0207694_100020423 425
114 3300025931 Ga0207644_10000001 Ga0207644_10000001502 425
115 3300025937 Ga0207669_10000342 Ga0207669_1000034228 425
116 3300025941 Ga0207711_10153153 Ga0207711_101531532 425
117 3300025949 Ga0207667_10000005 Ga0207667_10000005506 425
118 3300025949 Ga0207667_10015601 Ga0207667_100156013 425
119 3300025986 Ga0207658_10000003 Ga0207658_100000031024 425
120 3300025986 Ga0207658_10111545 Ga0207658_101115453 425
121 3300026116 Ga0207674_10000299 Ga0207674_1000029911 425
122 3300026116 Ga0207674_10056294 Ga0207674_100562941 425
123 3300026142 Ga0207698_10000001 Ga0207698_10000001307 425
124 3300026142 Ga0207698_10008480 Ga0207698_100084805 425
125 3300028379 Ga0268266_10000826 Ga0268266_1000082650 425
126 3300028800 Ga0265338_10007849 Ga0265338_100078498 425
127 3300028800 Ga0265338_10043938 Ga0265338_100439384 425
128 3300030734 Ga0316179_1000592 Ga0316179_100059224 425
129 3300030745 Ga0316182_1040641 Ga0316182_10406417 425
130 3300031240 Ga0265320_10003025 Ga0265320_100030259 425
131 3300031251 Ga0265327_10000025 Ga0265327_10000025267 425
132 3300031507 Ga0307509_10086876 Ga0307509_100868764 425
133 3300037312 Ga0395899_0016800 Ga0395899_0016800_2438_3790 425
134 3300037312 Ga0395899_0022882 Ga0395899_0022882_371_1648 425
135 3300037418 Ga0395900_0059147 Ga0395900_0059147_2540_3817 425
136 3300037418 Ga0395900_0110085 Ga0395900_0110085_95_1378 425
137 3300037471 Ga0395905_0000943 Ga0395905_0000943_14841_16118 425
138 3300038443 Ga0395901_0018420 Ga0395901_0018420_1706_2983 425
139 3300041486 Ga0451807_2191970 Ga0451807_2191970_1629_2918 425
140 3300042004 Ga0439445_0002815 Ga0439445_0002815_2544_3821 425
141 3300044683 Ga0466965_0001769 Ga0466965_0001769_3242_4522 425
142 3300046460 Ga0495638_0000061 Ga0495638_0000061_116179_117456 425
143 3300047320 Ga0495672_0000010 Ga0495672_0000010_258826_260103 425
144 3300047472 Ga0495686_0017556 Ga0495686_0017556_2874_4151 425
145 3300048927 Ga0496124_0056616 Ga0496124_0056616_143_1420 425
146 3300049571 Ga0501034_0000024 Ga0501034_0000024_30462_31745 425
147 3300049586 Ga0501070_0242587 Ga0501070_0242587_37_1314 425
148 3300050489 nmdc:mga03683_26554_c1 nmdc:mga03683_26554_c1_855_2132 425
149 3300050491 nmdc:mga00v17_8517_c1 nmdc:mga00v17_8517_c1_822_2099 425
150 3300050492 nmdc:mga0yw44_17_c1 nmdc:mga0yw44_17_c1_68292_69569 425
151 3300050492 nmdc:mga0yw44_1_c1 nmdc:mga0yw44_1_c1_6617_7918 425
152 3300050492 nmdc:mga0yw44_328_c1 nmdc:mga0yw44_328_c1_4437_5729 425
153 3300050492 nmdc:mga0yw44_8_c1 nmdc:mga0yw44_8_c1_79679_80977 425
154 3300050493 nmdc:mga0k408_428_c1 nmdc:mga0k408_428_c1_13822_15120 425
155 3300053093 Ga0500651_0000094 Ga0500651_0000094_28162_29442 425
156 3300053103 Ga0500555_000009 Ga0500555_000009_102356_103633 425
157 3300053109 Ga0500569_000001 Ga0500569_000001_116180_117457 425
158 3300053146 Ga0500588_0000037 Ga0500588_0000037_18984_20261 425
159 3300053724 Ga0500570_000012 Ga0500570_000012_21553_22842 425
160 3300003322 rootL2_10191205 rootL2_101912052 426
161 3300001989 JGI24739J22299_10021771 JGI24739J22299_100217712 427
162 3300002067 JGI24735J21928_10000124 JGI24735J21928_1000012424 427
163 3300002075 JGI24738J21930_10003528 JGI24738J21930_100035283 427
164 3300005327 Ga0070658_10000061 Ga0070658_1000006167 427
165 3300005327 Ga0070658_10000446 Ga0070658_1000044622 427
166 3300005327 Ga0070658_10003460 Ga0070658_1000346015 427
167 3300005327 Ga0070658_10112949 Ga0070658_101129493 427
168 3300005329 Ga0070683_100003953 Ga0070683_10000395311 427
169 3300005335 Ga0070666_10021820 Ga0070666_100218203 427
170 3300005336 Ga0070680_100008573 Ga0070680_1000085738 427
171 3300005339 Ga0070660_100003583 Ga0070660_1000035835 427
172 3300005339 Ga0070660_100010893 Ga0070660_1000108933 427
173 3300005339 Ga0070660_100196242 Ga0070660_1001962422 427
174 3300005364 Ga0070673_100000135 Ga0070673_10000013539 427
175 3300005366 Ga0070659_100032219 Ga0070659_1000322192 427
176 3300005456 Ga0070678_100004714 Ga0070678_1000047145 427
177 3300005457 Ga0070662_100051006 Ga0070662_1000510063 427
178 3300005466 Ga0070685_10000450 Ga0070685_1000045030 427
179 3300005530 Ga0070679_100013016 Ga0070679_1000130162 427
180 3300005548 Ga0070665_100026877 Ga0070665_1000268776 427
181 3300005563 Ga0068855_100006816 Ga0068855_10000681613 427
182 3300005564 Ga0070664_100000291 Ga0070664_10000029142 427
183 3300005564 Ga0070664_100091058 Ga0070664_1000910581 427
184 3300005577 Ga0068857_100000066 Ga0068857_10000006666 427
185 3300005614 Ga0068856_100000029 Ga0068856_10000002972 427
186 3300005614 Ga0068856_100000122 Ga0068856_10000012222 427
187 3300005614 Ga0068856_100083674 Ga0068856_1000836742 427
188 3300005616 Ga0068852_100000011 Ga0068852_10000001116 427
189 3300005842 Ga0068858_100113533 Ga0068858_1001135331 427
190 3300006051 Ga0075364_10038631 Ga0075364_100386312 427
191 3300006178 Ga0075367_10039979 Ga0075367_100399792 427
192 3300006353 Ga0075370_10006039 Ga0075370_100060393 427
193 3300006881 Ga0068865_100025464 Ga0068865_1000254644 427
194 3300009093 Ga0105240_10000003 Ga0105240_10000003350 427
195 3300009098 Ga0105245_10000034 Ga0105245_10000034115 427
196 3300009148 Ga0105243_10000001 Ga0105243_10000001900 427
197 3300009176 Ga0105242_10000001 Ga0105242_10000001359 427
198 3300009545 Ga0105237_10008870 Ga0105237_100088702 427
199 3300010375 Ga0105239_10000960 Ga0105239_1000096018 427
200 3300010375 Ga0105239_10001938 Ga0105239_100019384 427
201 3300010375 Ga0105239_10030374 Ga0105239_100303745 427
202 3300011119 Ga0105246_10004917 Ga0105246_100049178 427
203 3300011119 Ga0105246_10006146 Ga0105246_100061469 427
204 3300011119 Ga0105246_10007113 Ga0105246_100071137 427
205 3300013100 Ga0157373_10001445 Ga0157373_100014454 427
206 3300013102 Ga0157371_10105098 Ga0157371_101050982 427
207 3300013104 Ga0157370_10002614 Ga0157370_1000261423 427
208 3300013104 Ga0157370_10058258 Ga0157370_100582582 427
209 3300013105 Ga0157369_10000026 Ga0157369_1000002632 427
210 3300013105 Ga0157369_10037483 Ga0157369_100374832 427
211 3300013296 Ga0157374_10002366 Ga0157374_1000236617 427
212 3300013296 Ga0157374_10063345 Ga0157374_100633452 427
213 3300014745 Ga0157377_10000372 Ga0157377_1000037211 427
214 3300014969 Ga0157376_10000308 Ga0157376_1000030824 427
215 3300025901 Ga0207688_10111263 Ga0207688_101112631 427
216 3300025903 Ga0207680_10102201 Ga0207680_101022011 427
217 3300025904 Ga0207647_10006649 Ga0207647_1000664911 427
218 3300025909 Ga0207705_10000010 Ga0207705_10000010551 427
219 3300025909 Ga0207705_10005404 Ga0207705_1000540413 427
220 3300025909 Ga0207705_10092150 Ga0207705_100921501 427
221 3300025913 Ga0207695_10000005 Ga0207695_10000005358 427
222 3300025914 Ga0207671_10010876 Ga0207671_100108765 427
223 3300025919 Ga0207657_10001623 Ga0207657_100016235 427
224 3300025919 Ga0207657_10061773 Ga0207657_100617731 427
225 3300025920 Ga0207649_10129202 Ga0207649_101292022 427
226 3300025921 Ga0207652_10120521 Ga0207652_101205212 427
227 3300025927 Ga0207687_10000365 Ga0207687_1000036510 427
228 3300025932 Ga0207690_10018111 Ga0207690_100181113 427
229 3300025933 Ga0207706_10001362 Ga0207706_1000136218 427
230 3300025934 Ga0207686_10000001 Ga0207686_10000001241 427
231 3300025935 Ga0207709_10000002 Ga0207709_10000002358 427
232 3300025938 Ga0207704_10008000 Ga0207704_100080004 427
233 3300025944 Ga0207661_10003471 Ga0207661_100034718 427
234 3300025945 Ga0207679_10000126 Ga0207679_1000012619 427
235 3300025960 Ga0207651_10005851 Ga0207651_100058514 427
236 3300026035 Ga0207703_10132781 Ga0207703_101327811 427
237 3300026078 Ga0207702_10000051 Ga0207702_1000005121 427
238 3300026078 Ga0207702_10000549 Ga0207702_100005492 427
239 3300026116 Ga0207674_10000032 Ga0207674_1000003219 427
240 3300026121 Ga0207683_10022580 Ga0207683_100225802 427
241 3300026142 Ga0207698_10000915 Ga0207698_1000091515 427
242 3300028379 Ga0268266_10009766 Ga0268266_1000976612 427
243 3300028556 Ga0265337_1004410 Ga0265337_10044103 427
244 3300028573 Ga0265334_10000619 Ga0265334_100006196 427
245 3300028800 Ga0265338_10000060 Ga0265338_1000006010 427
246 3300031247 Ga0265340_10000025 Ga0265340_1000002578 427
247 3300037312 Ga0395899_0074820 Ga0395899_0074820_304_1587 427
248 3300037418 Ga0395900_0000001 Ga0395900_0000001_381968_383251 427
249 3300037418 Ga0395900_0140542 Ga0395900_0140542_720_2003 427
250 3300037466 Ga0395898_0000002 Ga0395898_0000002_722755_724038 427
251 3300038443 Ga0395901_0000006 Ga0395901_0000006_368431_369714 427
252 3300042439 Ga0439464_0000005 Ga0439464_0000005_41047_42330 427
253 3300044712 Ga0453684_0099946 Ga0453684_0099946_1775_3058 427
254 3300048927 Ga0496124_0143342 Ga0496124_0143342_387_1670 427
255 3300049568 Ga0501031_0001813 Ga0501031_0001813_4790_6082 427
256 3300049569 Ga0501032_0001512 Ga0501032_0001512_7358_8650 427
257 3300049571 Ga0501034_0025764 Ga0501034_0025764_1916_3208 427
258 3300049572 Ga0501036_0010730 Ga0501036_0010730_405_1697 427
259 3300049573 Ga0501037_0000138 Ga0501037_0000138_17057_18349 427
260 3300049574 Ga0501038_0035471 Ga0501038_0035471_2117_3409 427
261 3300049579 Ga0501043_0000062 Ga0501043_0000062_89948_91240 427
262 3300049580 Ga0501046_0000059 Ga0501046_0000059_34890_36182 427
263 3300049581 Ga0501047_0000032 Ga0501047_0000032_167542_168834 427
264 3300049582 Ga0501048_0001836 Ga0501048_0001836_1998_3290 427
265 3300049589 Ga0501073_0058794 Ga0501073_0058794_699_1991 427
266 3300049822 Ga0501035_0001735 Ga0501035_0001735_815_2107 427
267 3300049823 Ga0501044_0012395 Ga0501044_0012395_351_1643 427
268 3300050493 nmdc:mga0k408_14884_c1 nmdc:mga0k408_14884_c1_2436_3719 427
269 3300053087 Ga0500643_000034 Ga0500643_000034_35476_36783 427
270 3300053088 Ga0500644_0003450 Ga0500644_0003450_1098_2384 427
271 3300053090 Ga0500646_0000368 Ga0500646_0000368_11239_12525 427
272 3300053098 Ga0500650_0000001 Ga0500650_0000001_86534_87820 427
273 3300053118 Ga0500594_0000001 Ga0500594_0000001_751332_752618 427
274 3300053133 Ga0500655_000273 Ga0500655_000273_4927_6213 427
275 3300053143 Ga0500579_002268 Ga0500579_002268_976_2262 427
276 3300053160 Ga0500633_0001960 Ga0500633_0001960_2250_3536 427
277 3300060353 Ga0501082_0028875 Ga0501082_0028875_1823_3115 427

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00464

SHMT

Serine hydroxymethyltransferase

24

417

0.97

PF00155

Aminotran_1_2

Aminotransferase class I and II

75

357

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4otl-assembly1.cif.gz_C x-ray crystal structure of serine hydroxymethyl transferase from burkholderia cenocepacia bound to plp and glycine 0.8842 3 419
8sui-assembly1.cif.gz_B joint x-ray/neutron structure of thermus thermophilus serine hydroxymethyltransferase (tthshmt) in internal aldimine state with l-ser bound in a pre-michalis complex 0.8795 3 420
2vmo-assembly1.cif.gz_A crystal structure of n341absshmt gly external aldimine 0.8791 3 412
2w7f-assembly1.cif.gz_A crystal structure of y51fbsshmt l-ser external aldimine 0.8789 3 413
2vmw-assembly1.cif.gz_A crystal structure of f351gbsshmt in complex with l-ser 0.8789 3 413
ID Description Score Start End Superfamily
af_Q2FWE5_284_405_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9764 293 412 3.90.1150.10
4msoB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9558 284 419 3.90.1150.10
af_Q2FWE5_284_405_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.953 293 412 3.90.1150.10
3n0lB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9456 284 419 3.90.1150.10
af_O13426_316_465_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9383 288 415 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7W4HR90-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.993 307 413 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653
AF-A0A3D2JRA2-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.9859 287 420 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653
AF-A0A3D4IUJ0-F1-model_v4 deleted 0.9843 191 316
AF-A0A3B9NMW5-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.984 255 372 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653
AF-A0A7C4MTA8-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.9833 294 420 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653

Feature Viewer

pLDDT pTM Quality
93.58 0.92 High
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Predicted Structure (AlphaFold2)

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