F381383

General Info

Members Datasets Scaffolds Average Seq Length
276 225 212 415

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0064732|Ga0496126_0064732_344_1741
Length 465
Sequence LGEKSLEGVKIRAIIRTVSRIIFDLARLQAAREADGGFCPAIGDATMNIMPRASHWDELIRTDRVHGSLYNDPAIFEAELQKIWYRTWVYVGHESEVPNANDYVAKSIGPQSIIMTRDERGKINLLLNRCSHRGNQVCSYDKGNARSFTCPFHSWTFANDGRLVGYAFPDGYEGTDKAGLGLGHVTRVQSYRGFVFGSFAAEGPSLVEHLGGAAETIDRLVRTSPEGEVEVTAGFLKHRVKANWKFILENECDGYHPAFVHSSIFGVADSAIGTLYGGKSTAVTRDYGNGHTEIDLRPEFRKRDQPLSWFGTNEARLPDYTSRMKAAYGDEQARQIMIDGTPHVMIFPNLFIAEIQMFVIQPLAADDSVQHVTALQFKGAPDMNRRLRQQTMGSVGPAGLLLADDSEMYERCHRGVLARGPEWIFLGRGERREGSDAEGFRIGHVTDEVPSRGIWRHYRSLMEAR

Samples

Sample ID Description Type Environment
1 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
2 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
3 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
4 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
5 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
6 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
7 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
8 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
9 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
10 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
11 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
12 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
13 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
14 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
15 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
16 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
17 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
18 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
19 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
20 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
21 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
22 2643221683 Variovorax sp. Root473 Isolate Unclassified
23 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
24 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
25 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
26 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
27 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
28 2791355199
29 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
30 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
31 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
32 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
33 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
34 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
35 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
36 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
37 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
38 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
39 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
40 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
41 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
42 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
43 2904699407
44 2906610324
45 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
46 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
47 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
48 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
49 2922425934
50 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
51 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
52 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
53 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
54 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
55 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
56 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
57 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
58 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
59 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
60 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
61 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
62 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
63 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
64 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
65 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
66 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
67 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
68 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
69 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
70 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
71 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
72 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
73 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
74 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
75 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
76 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
77 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
78 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
79 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
80 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
81 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
82 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
83 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
84 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
85 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
86 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
87 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
88 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
89 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
90 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
91 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
92 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
93 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
94 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
95 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
96 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
97 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
98 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
99 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
100 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
101 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
102 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
103 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
104 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
105 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
129 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
130 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
131 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
133 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
134 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
137 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
138 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
139 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
140 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
141 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
147 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
148 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
149 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
150 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
151 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
152 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
153 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
154 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
155 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
158 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
159 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
160 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
161 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
162 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
163 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
164 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
165 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
166 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
167 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
168 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
169 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
170 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
171 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
172 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
173 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
174 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
175 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
176 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
177 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
178 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
179 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
180 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
181 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
182 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
186 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
187 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
191 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
194 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
195 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
196 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
197 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
198 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
199 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
200 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
203 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
204 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
205 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
206 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
207 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
208 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
209 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
210 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
211 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
212 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
213 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
214 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
215 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
216 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
217 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
218 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
219 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
220 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
221 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
222 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
223 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
224 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
225 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.94
Metatranscriptomes 0
Isolates 22.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.77
Nodule 10.51
Rhizoplane 8.33
Rhizosphere 51.45
Stem 0
Stem Tuber 0.36
Unclassified 15.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10001680 3300002067 Bacteria 7817
2 JGI25165J46597_1007630 3300003214 Bacteria 1773
3 Ga0065714_10066905 3300005288 Bacteria 6118
4 Ga0065704_10001178 3300005289 Bacteria 10911
5 Ga0070668_100086446 3300005347 Bacteria 2466
6 Ga0070669_100072606 3300005353 Bacteria 2548
7 Ga0070667_100002136 3300005367 Bacteria 17437
8 Ga0070714_100106933 3300005435 Bacteria 2472
9 Ga0070713_100058031 3300005436 Bacteria 3226
10 Ga0070713_100099101 3300005436 Bacteria 2521
11 Ga0070711_100107980 3300005439 Bacteria 2038
12 Ga0070694_100095312 3300005444 Bacteria 2095
13 Ga0070708_100066498 3300005445 Unclassified 3236
14 Ga0070678_100033254 3300005456 Bacteria 3578
15 Ga0070662_100061188 3300005457 Bacteria 2748
16 Ga0070662_100098842 3300005457 Bacteria 2205
17 Ga0070706_100020577 3300005467 Bacteria 6080
18 Ga0070706_100035413 3300005467 Bacteria 4611
19 Ga0070707_100022648 3300005468 Bacteria 5941
20 Ga0070707_100135810 3300005468 Bacteria 2393
21 Ga0070698_100157479 3300005471 Bacteria 2216
22 Ga0070679_100078449 3300005530 Bacteria 3291
23 Ga0068853_100012441 3300005539 Bacteria 6923
24 Ga0068855_100001880 3300005563 Bacteria 26079
25 Ga0068857_100031430 3300005577 Bacteria 4691
26 Ga0068854_100001796 3300005578 Bacteria 13078
27 Ga0068859_100369197 3300005617 Bacteria 1530
28 Ga0068864_100106589 3300005618 Bacteria 2492
29 Ga0068861_100069666 3300005719 Bacteria 2721
30 Ga0068863_100004616 3300005841 Bacteria 13571
31 Ga0068863_100042195 3300005841 Bacteria 4335
32 Ga0068862_100036313 3300005844 Bacteria 4177
33 Ga0081455_10001445 3300005937 Bacteria 29401
34 Ga0081455_10174695 3300005937 Bacteria 1632
35 Ga0081540_1001358 3300005983 Bacteria 21258
36 Ga0081540_1006743 3300005983 Bacteria 8304
37 Ga0081540_1019189 3300005983 Bacteria 4166
38 Ga0081540_1028603 3300005983 Bacteria 3126
39 Ga0075365_10032873 3300006038 Bacteria 3338
40 Ga0075365_10042016 3300006038 Bacteria 2988
41 Ga0075363_100000521 3300006048 Bacteria 12370
42 Ga0075367_10044635 3300006178 Bacteria 2599
43 Ga0075367_10110099 3300006178 Bacteria 1690
44 Ga0075369_10000058 3300006186 Bacteria 28291
45 Ga0075366_10013201 3300006195 Bacteria 4699
46 Ga0075370_10005533 3300006353 Bacteria 6293
47 Ga0075370_10022588 3300006353 Bacteria 3456
48 Ga0075370_10027761 3300006353 Bacteria 3143
49 Ga0068871_100040314 3300006358 Bacteria 3740
50 Ga0075428_100068885 3300006844 Bacteria 3870
51 Ga0075428_100332742 3300006844 Bacteria 1631
52 Ga0075430_100130038 3300006846 Bacteria 2099
53 Ga0075431_100114843 3300006847 Bacteria 2779
54 Ga0075434_100171080 3300006871 Bacteria 2192
55 Ga0097620_100369199 3300006931 Bacteria 1530
56 Ga0105244_10020847 3300009036 Bacteria 3633
57 Ga0111539_10176771 3300009094 Bacteria 2494
58 Ga0114129_10132524 3300009147 Bacteria 3422
59 Ga0114129_10582059 3300009147 Bacteria 1452
60 Ga0105243_10015179 3300009148 Bacteria 5828
61 Ga0105243_10148920 3300009148 Bacteria 2005
62 Ga0105239_10024172 3300010375 Bacteria 6692
63 Ga0105246_10061973 3300011119 Bacteria 2604
64 Ga0157369_10017480 3300013105 Bacteria 8059
65 Ga0157378_10003070 3300013297 Bacteria 14847
66 Ga0182008_10000392 3300014497 Bacteria 33955
67 Ga0207655_1006382 3300025728 Bacteria 7827
68 Ga0207710_10081457 3300025900 Bacteria 1502
69 Ga0207688_10036616 3300025901 Bacteria 2720
70 Ga0207643_10022705 3300025908 Bacteria 3457
71 Ga0207684_10161652 3300025910 Bacteria 1929
72 Ga0207695_10006468 3300025913 Bacteria 15207
73 Ga0207652_10041095 3300025921 Bacteria 3929
74 Ga0207646_10024967 3300025922 Bacteria 5469
75 Ga0207700_10042588 3300025928 Bacteria 3330
76 Ga0207700_10158442 3300025928 Bacteria 1878
77 Ga0207664_10177706 3300025929 Bacteria 1826
78 Ga0207706_10088261 3300025933 Bacteria 2726
79 Ga0207709_10000411 3300025935 Bacteria 41804
80 Ga0207709_10116671 3300025935 Bacteria 1795
81 Ga0207689_10045668 3300025942 Bacteria 3621
82 Ga0207679_10043035 3300025945 Bacteria 3249
83 Ga0207679_10099259 3300025945 Bacteria 2273
84 Ga0207667_10000343 3300025949 Bacteria 63689
85 Ga0207667_10025875 3300025949 Bacteria 6420
86 Ga0207668_10072199 3300025972 Bacteria 2468
87 Ga0207658_10003527 3300025986 Bacteria 11040
88 Ga0207639_10148421 3300026041 Bacteria 1961
89 Ga0207678_10044937 3300026067 Bacteria 3820
90 Ga0207641_10000590 3300026088 Bacteria 39948
91 Ga0207641_10215114 3300026088 Bacteria 1779
92 Ga0207676_10168831 3300026095 Bacteria 1904
93 Ga0207675_100068922 3300026118 Bacteria 3306
94 Ga0207683_10233413 3300026121 Bacteria 1678
95 Ga0209589_1000002 3300027357 Bacteria 708598
96 Ga0209489_100002 3300027361 Bacteria 708609
97 Ga0209700_100002 3300027363 Bacteria 708598
98 Ga0209970_1001103 3300027614 Bacteria 4766
99 Ga0307515_10167519 3300028794 Bacteria 2207
100 Ga0307509_10099475 3300031507 Bacteria 2949
101 Ga0307405_10004628 3300031731 Bacteria 6530
102 Ga0307412_10003856 3300031911 Bacteria 8336
103 Ga0307409_100128622 3300031995 Bacteria 2160
104 Ga0307510_10006759 3300033180 Bacteria 13678
105 Ga0307510_10122584 3300033180 Bacteria 2299
106 Ga0315911_1000003 3300033442 Bacteria 502217
107 Ga0373955_0061762 3300035172 Bacteria 2070
108 Ga0373924_0006566 3300035410 Bacteria 4171
109 Ga0395899_0062134 3300037312 Bacteria 2750
110 Ga0395900_0163738 3300037418 Bacteria 2267
111 Ga0395900_0322679 3300037418 Bacteria 1524
112 Ga0395898_0060644 3300037466 Bacteria 3676
113 Ga0395905_0000042 3300037471 Bacteria 247894
114 Ga0436361_0090117 3300039447 Bacteria 1935
115 Ga0436361_0299783 3300039447 Bacteria 4341
116 Ga0436363_1092732 3300039450 Bacteria 1469
117 Ga0439436_0008343 3300041404 Bacteria 3182
118 Ga0439438_000037 3300041405 Bacteria 66914
119 Ga0439447_000062 3300041407 Bacteria 38031
120 Ga0439451_000016 3300042009 Bacteria 40219
121 Ga0466969_0017339 3300044656 Bacteria 3761
122 Ga0466965_0095448 3300044683 Bacteria 1516
123 Ga0466961_0006555 3300044693 Bacteria 7397
124 Ga0466961_0012778 3300044693 Bacteria 5376
125 Ga0466961_0123921 3300044693 Bacteria 1622
126 Ga0466963_0008187 3300044694 Bacteria 6265
127 Ga0466963_0012212 3300044694 Bacteria 5252
128 Ga0466957_0035708 3300044842 Bacteria 2983
129 Ga0466959_0001345 3300045049 Bacteria 14988
130 Ga0466959_0001577 3300045049 Bacteria 14050
131 Ga0466958_0005373 3300045836 Bacteria 6885
132 Ga0466967_0042091 3300045976 Bacteria 3945
133 Ga0495617_005794 3300046452 Bacteria 4361
134 Ga0495603_0027846 3300046455 Bacteria 3408
135 Ga0495603_0139372 3300046455 Bacteria 1411
136 Ga0495590_0007684 3300046457 Bacteria 4142
137 Ga0495605_0077242 3300046474 Bacteria 1562
138 Ga0495606_0040122 3300046507 Bacteria 3148
139 Ga0495632_0011061 3300046519 Bacteria 5289
140 Ga0495632_0045973 3300046519 Bacteria 2171
141 Ga0495643_0015430 3300046522 Bacteria 4514
142 Ga0495648_0020846 3300046524 Bacteria 4558
143 Ga0495656_0064876 3300046615 Bacteria 1604
144 Ga0495668_0006439 3300046616 Bacteria 7685
145 Ga0495668_0026909 3300046616 Bacteria 3261
146 Ga0495668_0043691 3300046616 Bacteria 2491
147 Ga0495668_0122700 3300046616 Bacteria 1421
148 Ga0495611_0055570 3300046648 Bacteria 1791
149 Ga0495588_0040903 3300046674 Bacteria 2366
150 Ga0495671_0022988 3300046692 Bacteria 3261
151 Ga0495672_0078440 3300047320 Bacteria 1847
152 Ga0495686_0105655 3300047472 Bacteria 1694
153 Ga0496101_0027502 3300048904 Bacteria 3963
154 Ga0496102_0000017 3300048905 Bacteria 284200
155 Ga0496102_0053212 3300048905 Bacteria 3691
156 Ga0496103_0000041 3300048906 Bacteria 169542
157 Ga0496103_0200686 3300048906 Bacteria 1282
158 Ga0496105_0036632 3300048908 Bacteria 4042
159 Ga0496108_0015980 3300048911 Bacteria 6119
160 Ga0496109_0044896 3300048912 Bacteria 4010
161 Ga0496110_0057296 3300048913 Bacteria 3430
162 Ga0496116_0000121 3300048919 Bacteria 166606
163 Ga0496117_0000163 3300048920 Bacteria 140644
164 Ga0496117_0100234 3300048920 Bacteria 1835
165 Ga0496118_0000057 3300048921 Bacteria 228315
166 Ga0496118_0024437 3300048921 Bacteria 5213
167 Ga0496119_0000738 3300048922 Bacteria 44097
168 Ga0496120_0001976 3300048923 Bacteria 22359
169 Ga0496121_0004698 3300048924 Bacteria 18093
170 Ga0496121_0068728 3300048924 Bacteria 2864
171 Ga0496121_0068891 3300048924 Bacteria 2859
172 Ga0496124_0033084 3300048927 Bacteria 4553
173 Ga0496125_0041546 3300048928 Bacteria 3929
174 Ga0496126_0000135 3300048929 Bacteria 169551
175 Ga0496126_0058292 3300048929 Bacteria 3481
176 Ga0496126_0064732 3300048929 Bacteria 3274
177 Ga0495682_0010084 3300049460 Bacteria 3668
178 Ga0501047_0000112 3300049581 Bacteria 98939
179 Ga0501047_0231556 3300049581 Bacteria 1701
180 Ga0501044_0171926 3300049823 Bacteria 2138
181 nmdc:mga03683_36058_c1 3300050489 Bacteria 2010
182 nmdc:mga0yw44_29281_c1 3300050492 Bacteria 3177
183 nmdc:mga0k408_22690_c1 3300050493 Bacteria 3536
184 nmdc:mga06z11_21866_c1 3300050494 Bacteria 2978
185 nmdc:mga06z11_8286_c1 3300050494 Bacteria 4325
186 nmdc:mga07m45_25134_c1 3300050496 Bacteria 3265
187 nmdc:mga07m45_2988_c1 3300050496 Bacteria 7000
188 nmdc:mga07m45_7816_c1 3300050496 Bacteria 5472
189 nmdc:mga05p37_100401_c1 3300050507 Bacteria 3564
190 nmdc:mga0qj67_180864_c1 3300050509 Bacteria 1712
191 nmdc:mga06r32_84745_c1 3300050510 Bacteria 3089
192 nmdc:mga08y16_349053_c1 3300050511 Bacteria 1520
193 nmdc:mga0n895_240120_c1 3300050512 Bacteria 1838
194 nmdc:mga0sz30_116_c1 3300050516 Bacteria 30138
195 Ga0500635_0003059 3300053080 Bacteria 4180
196 Ga0500643_004217 3300053087 Bacteria 6583
197 Ga0500651_0100928 3300053093 Bacteria 1769
198 Ga0500566_0015336 3300053094 Bacteria 4497
199 Ga0500641_0029575 3300053096 Bacteria 2147
200 Ga0500554_006140 3300053102 Bacteria 2674
201 Ga0500555_009084 3300053103 Bacteria 2840
202 Ga0500595_000111 3300053119 Bacteria 55013
203 Ga0500608_007778 3300053122 Bacteria 4456
204 Ga0500658_0044824 3300053134 Bacteria 1785
205 Ga0500568_0009856 3300053139 Bacteria 4514
206 Ga0500589_047532 3300053147 Bacteria 1997
207 Ga0500603_001184 3300053150 Bacteria 6051
208 Ga0500636_0027672 3300053177 Bacteria 3349
209 Ga0500636_0032919 3300053177 Bacteria 3069
210 Ga0500637_0000354 3300053178 Bacteria 17369
211 Ga0500637_0000458 3300053178 Bacteria 15708
212 Ga0500661_000535 3300055283 Bacteria 7063

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0299783 Ga0436361_0299783_3294_4331 341
2 3300037418 Ga0395900_0322679 Ga0395900_0322679_450_1514 352
3 3300037466 Ga0395898_0060644 Ga0395898_0060644_11_1075 352
4 3300044693 Ga0466961_0123921 Ga0466961_0123921_472_1605 375
5 3300048906 Ga0496103_0200686 Ga0496103_0200686_48_1271 386
6 3300013105 Ga0157369_10017480 Ga0157369_100174803 391
7 3300053096 Ga0500641_0029575 Ga0500641_0029575_372_1694 395
8 3300005983 Ga0081540_1019189 Ga0081540_10191892 396
9 3300006844 Ga0075428_100068885 Ga0075428_1000688853 396
10 3300006844 Ga0075428_100332742 Ga0075428_1003327421 396
11 3300006846 Ga0075430_100130038 Ga0075430_1001300382 396
12 3300006847 Ga0075431_100114843 Ga0075431_1001148432 396
13 3300006871 Ga0075434_100171080 Ga0075434_1001710801 396
14 3300050510 nmdc:mga06r32_84745_c1 nmdc:mga06r32_84745_c1_1013_2317 396
15 3300050512 nmdc:mga0n895_240120_c1 nmdc:mga0n895_240120_c1_208_1512 396
16 3300005347 Ga0070668_100086446 Ga0070668_1000864461 398
17 3300005353 Ga0070669_100072606 Ga0070669_1000726062 398
18 3300005456 Ga0070678_100033254 Ga0070678_1000332543 398
19 3300005719 Ga0068861_100069666 Ga0068861_1000696663 398
20 3300005844 Ga0068862_100036313 Ga0068862_1000363135 398
21 3300006038 Ga0075365_10032873 Ga0075365_100328732 398
22 3300006178 Ga0075367_10110099 Ga0075367_101100992 398
23 3300009094 Ga0111539_10176771 Ga0111539_101767712 398
24 3300009148 Ga0105243_10148920 Ga0105243_101489202 398
25 3300011119 Ga0105246_10061973 Ga0105246_100619733 398
26 3300013297 Ga0157378_10003070 Ga0157378_1000307011 398
27 3300025901 Ga0207688_10036616 Ga0207688_100366162 398
28 3300025908 Ga0207643_10022705 Ga0207643_100227052 398
29 3300025935 Ga0207709_10116671 Ga0207709_101166712 398
30 3300025942 Ga0207689_10045668 Ga0207689_100456682 398
31 3300025972 Ga0207668_10072199 Ga0207668_100721993 398
32 3300026067 Ga0207678_10044937 Ga0207678_100449374 398
33 3300026118 Ga0207675_100068922 Ga0207675_1000689223 398
34 3300031507 Ga0307509_10099475 Ga0307509_100994752 398
35 3300031995 Ga0307409_100128622 Ga0307409_1001286222 398
36 3300033180 Ga0307510_10006759 Ga0307510_100067598 398
37 3300046452 Ga0495617_005794 Ga0495617_005794_247_1506 398
38 3300046455 Ga0495603_0027846 Ga0495603_0027846_1787_3046 398
39 3300046455 Ga0495603_0139372 Ga0495603_0139372_104_1378 398
40 3300046474 Ga0495605_0077242 Ga0495605_0077242_175_1449 398
41 3300046519 Ga0495632_0011061 Ga0495632_0011061_3483_4742 398
42 3300046615 Ga0495656_0064876 Ga0495656_0064876_124_1383 398
43 3300046616 Ga0495668_0006439 Ga0495668_0006439_2706_3965 398
44 3300046616 Ga0495668_0043691 Ga0495668_0043691_1026_2285 398
45 3300046616 Ga0495668_0122700 Ga0495668_0122700_119_1393 398
46 3300046648 Ga0495611_0055570 Ga0495611_0055570_270_1529 398
47 3300046674 Ga0495588_0040903 Ga0495588_0040903_668_1942 398
48 3300046692 Ga0495671_0022988 Ga0495671_0022988_1841_3115 398
49 3300050511 nmdc:mga08y16_349053_c1 nmdc:mga08y16_349053_c1_223_1497 398
50 3300053094 Ga0500566_0015336 Ga0500566_0015336_964_2238 398
51 3300053119 Ga0500595_000111 Ga0500595_000111_35179_36453 398
52 3300053134 Ga0500658_0044824 Ga0500658_0044824_97_1371 398
53 3300053178 Ga0500637_0000354 Ga0500637_0000354_1592_2866 398
54 3300055283 Ga0500661_000535 Ga0500661_000535_944_2218 398
55 3300005841 Ga0068863_100042195 Ga0068863_1000421952 400
56 3300025900 Ga0207710_10081457 Ga0207710_100814572 400
57 3300026088 Ga0207641_10215114 Ga0207641_102151142 400
58 3300046457 Ga0495590_0007684 Ga0495590_0007684_1301_2560 400
59 3300046507 Ga0495606_0040122 Ga0495606_0040122_1873_3132 400
60 3300046519 Ga0495632_0045973 Ga0495632_0045973_372_1646 400
61 3300046616 Ga0495668_0026909 Ga0495668_0026909_1858_3117 400
62 3300048924 Ga0496121_0068891 Ga0496121_0068891_30_1304 400
63 3300048929 Ga0496126_0058292 Ga0496126_0058292_1280_2554 400
64 3300049460 Ga0495682_0010084 Ga0495682_0010084_399_1658 400
65 3300050489 nmdc:mga03683_36058_c1 nmdc:mga03683_36058_c1_302_1507 400
66 3300050493 nmdc:mga0k408_22690_c1 nmdc:mga0k408_22690_c1_52_1257 400
67 3300050494 nmdc:mga06z11_8286_c1 nmdc:mga06z11_8286_c1_1590_2795 400
68 3300050496 nmdc:mga07m45_25134_c1 nmdc:mga07m45_25134_c1_52_1257 400
69 3300053093 Ga0500651_0100928 Ga0500651_0100928_148_1422 400
70 3300053103 Ga0500555_009084 Ga0500555_009084_281_1555 400
71 3300053147 Ga0500589_047532 Ga0500589_047532_488_1747 400
72 3300053177 Ga0500636_0032919 Ga0500636_0032919_1393_2652 400
73 3300005983 Ga0081540_1001358 Ga0081540_10013586 401
74 3300005937 Ga0081455_10174695 Ga0081455_101746952 403
75 3300005983 Ga0081540_1006743 Ga0081540_10067438 403
76 3300009147 Ga0114129_10582059 Ga0114129_105820592 403
77 iso_pu_bacteria 2675903060 2676494038 407
78 3300005435 Ga0070714_100106933 Ga0070714_1001069332 409
79 3300035410 Ga0373924_0006566 Ga0373924_0006566_2029_3339 410
80 3300044656 Ga0466969_0017339 Ga0466969_0017339_584_1819 410
81 3300044693 Ga0466961_0012778 Ga0466961_0012778_199_1434 410
82 3300045049 Ga0466959_0001345 Ga0466959_0001345_13628_14863 410
83 3300045836 Ga0466958_0005373 Ga0466958_0005373_1407_2642 410
84 3300005468 Ga0070707_100135810 Ga0070707_1001358102 411
85 3300047472 Ga0495686_0105655 Ga0495686_0105655_193_1437 412
86 3300053102 Ga0500554_006140 Ga0500554_006140_1271_2509 412
87 3300053150 Ga0500603_001184 Ga0500603_001184_149_1387 412
88 iso_pu_bacteria 8056689827 8056692539 412
89 iso_pu_bacteria 2870782633 2870785065 413
90 iso_pu_bacteria 2903768456 2903772497 413
91 iso_pu_bacteria 2908739725 2908741307 413
92 iso_pu_bacteria 2513237096 2513660347 414
93 iso_pu_bacteria 2513237098 2513672687 414
94 iso_pu_bacteria 2513237137 2513857872 414
95 iso_pu_bacteria 2513237141 2513888445 414
96 iso_pu_bacteria 2513237145 2513922190 414
97 iso_pu_bacteria 2517572143 2517890898 414
98 iso_pu_bacteria 2524023228 2524537655 414
99 iso_pu_bacteria 2599185188 2599501876 414
100 iso_pu_bacteria 2599185248 2599773409 414
101 iso_pu_bacteria 2599185289 2599884360 414
102 iso_pu_bacteria 2599185291 2599896461 414
103 iso_pu_bacteria 2599185305 2599958355 414
104 iso_pu_bacteria 2599185306 2599964223 414
105 iso_pu_bacteria 2599185308 2599976295 414
106 iso_pu_bacteria 2599185313 2600003584 414
107 iso_pu_bacteria 2599185314 2600009938 414
108 iso_pu_bacteria 2599185315 2600016070 414
109 iso_pu_bacteria 2599185321 2600051276 414
110 iso_pu_bacteria 2599185324 2600069365 414
111 iso_pu_bacteria 2667528170 2671089156 414
112 iso_pu_bacteria 2667528175 2671120181 414
113 iso_pu_bacteria 2728368998 2728755192 414
114 iso_pu_bacteria 2791355197 2793066248 414
115 iso_pu_bacteria 2791355197 2793072276 414
116 iso_pu_bacteria 2791355199 2793081290 414
117 iso_pu_bacteria 2824617872 2824618584 414
118 iso_pu_bacteria 2824626560 2824627201 414
119 iso_pu_bacteria 2824635225 2824635583 414
120 iso_pu_bacteria 2824644064 2824644419 414
121 iso_pu_bacteria 2824714736 2824715451 414
122 iso_pu_bacteria 2824723954 2824724914 414
123 iso_pu_bacteria 2885374607 2885378636 414
124 iso_pu_bacteria 2885383462 2885385439 414
125 iso_pu_bacteria 2889033259 2889037543 414
126 iso_pu_bacteria 2903748898 2903758453 414
127 iso_pu_bacteria 2903768456 2903768566 414
128 iso_pu_bacteria 2904690495 2904698523 414
129 iso_pu_bacteria 2904699407 2904700471 414
130 iso_pu_bacteria 2906610324 2906616101 414
131 iso_pu_bacteria 2906635258 2906639527 414
132 iso_pu_bacteria 2906635258 2906643476 414
133 iso_pu_bacteria 2906660503 2906664565 414
134 iso_pu_bacteria 2908739725 2908741155 414
135 iso_pu_bacteria 2908756301 2908762466 414
136 iso_pu_bacteria 2922425934 2922431929 414
137 iso_pu_bacteria 2935630451 2935635236 414
138 iso_pu_bacteria 2941507105 2941512040 414
139 iso_pu_bacteria 2941515067 2941519742 414
140 iso_pu_bacteria 2941523033 2941527971 414
141 iso_pu_bacteria 3005474847 3005481872 414
142 iso_pu_bacteria 8006933436 8006938886 414
143 iso_pu_bacteria 8006973647 8006978656 414
144 iso_pu_bacteria 8006984368 8006986671 414
145 iso_pu_bacteria 8019555841 8019560049 414
146 iso_pu_bacteria 8056673599 8056676682 414
147 3300005467 Ga0070706_100035413 Ga0070706_1000354136 415
148 3300035172 Ga0373955_0061762 Ga0373955_0061762_677_1942 415
149 3300044683 Ga0466965_0095448 Ga0466965_0095448_86_1336 415
150 3300044694 Ga0466963_0012212 Ga0466963_0012212_2641_3891 415
151 3300044842 Ga0466957_0035708 Ga0466957_0035708_1362_2612 415
152 3300049581 Ga0501047_0000112 Ga0501047_0000112_82049_83332 415
153 3300053087 Ga0500643_004217 Ga0500643_004217_2335_3582 415
154 iso_pu_bacteria 2558860112 2558908830 415
155 iso_pu_bacteria 2899370129 2899371005 415
156 3300005289 Ga0065704_10001178 Ga0065704_100011785 416
157 3300005445 Ga0070708_100066498 Ga0070708_1000664982 416
158 3300005457 Ga0070662_100098842 Ga0070662_1000988421 416
159 3300005618 Ga0068864_100106589 Ga0068864_1001065892 416
160 3300005841 Ga0068863_100004616 Ga0068863_1000046163 416
161 3300006048 Ga0075363_100000521 Ga0075363_1000005218 416
162 3300006178 Ga0075367_10044635 Ga0075367_100446353 416
163 3300006195 Ga0075366_10013201 Ga0075366_100132014 416
164 3300006353 Ga0075370_10005533 Ga0075370_100055333 416
165 3300006353 Ga0075370_10027761 Ga0075370_100277613 416
166 3300009036 Ga0105244_10020847 Ga0105244_100208473 416
167 3300009147 Ga0114129_10132524 Ga0114129_101325243 416
168 3300009148 Ga0105243_10015179 Ga0105243_100151792 416
169 3300014497 Ga0182008_10000392 Ga0182008_1000039240 416
170 3300025728 Ga0207655_1006382 Ga0207655_10063824 416
171 3300025933 Ga0207706_10088261 Ga0207706_100882613 416
172 3300025935 Ga0207709_10000411 Ga0207709_1000041133 416
173 3300025945 Ga0207679_10043035 Ga0207679_100430354 416
174 3300026088 Ga0207641_10000590 Ga0207641_1000059030 416
175 3300026095 Ga0207676_10168831 Ga0207676_101688312 416
176 3300031731 Ga0307405_10004628 Ga0307405_100046285 416
177 3300041404 Ga0439436_0008343 Ga0439436_0008343_1118_2407 416
178 3300044693 Ga0466961_0006555 Ga0466961_0006555_3905_5161 416
179 3300044694 Ga0466963_0008187 Ga0466963_0008187_2357_3616 416
180 3300045049 Ga0466959_0001577 Ga0466959_0001577_8689_9945 416
181 3300045976 Ga0466967_0042091 Ga0466967_0042091_351_1610 416
182 3300048904 Ga0496101_0027502 Ga0496101_0027502_1501_2775 416
183 3300048905 Ga0496102_0000017 Ga0496102_0000017_162032_163306 416
184 3300048906 Ga0496103_0000041 Ga0496103_0000041_87656_88930 416
185 3300048908 Ga0496105_0036632 Ga0496105_0036632_1362_2636 416
186 3300048911 Ga0496108_0015980 Ga0496108_0015980_2171_3445 416
187 3300048912 Ga0496109_0044896 Ga0496109_0044896_1594_2868 416
188 3300048913 Ga0496110_0057296 Ga0496110_0057296_322_1596 416
189 3300048919 Ga0496116_0000121 Ga0496116_0000121_96914_98188 416
190 3300048920 Ga0496117_0000163 Ga0496117_0000163_130096_131370 416
191 3300048920 Ga0496117_0100234 Ga0496117_0100234_401_1690 416
192 3300048921 Ga0496118_0000057 Ga0496118_0000057_96914_98188 416
193 3300048921 Ga0496118_0024437 Ga0496118_0024437_1856_3145 416
194 3300048922 Ga0496119_0000738 Ga0496119_0000738_3547_4821 416
195 3300048923 Ga0496120_0001976 Ga0496120_0001976_9096_10370 416
196 3300048924 Ga0496121_0004698 Ga0496121_0004698_4436_5710 416
197 3300048924 Ga0496121_0068728 Ga0496121_0068728_1019_2308 416
198 3300048927 Ga0496124_0033084 Ga0496124_0033084_2234_3508 416
199 3300048928 Ga0496125_0041546 Ga0496125_0041546_838_2112 416
200 3300048929 Ga0496126_0000135 Ga0496126_0000135_80604_81878 416
201 3300049581 Ga0501047_0231556 Ga0501047_0231556_292_1551 416
202 3300049823 Ga0501044_0171926 Ga0501044_0171926_98_1369 416
203 3300050496 nmdc:mga07m45_2988_c1 nmdc:mga07m45_2988_c1_5668_6957 416
204 3300050507 nmdc:mga05p37_100401_c1 nmdc:mga05p37_100401_c1_1463_2719 416
205 3300053122 Ga0500608_007778 Ga0500608_007778_1460_2749 416
206 iso_pu_bacteria 2643221683 2644464316 416
207 3300005468 Ga0070707_100022648 Ga0070707_1000226482 417
208 3300005530 Ga0070679_100078449 Ga0070679_1000784493 417
209 3300025921 Ga0207652_10041095 Ga0207652_100410954 417
210 3300025922 Ga0207646_10024967 Ga0207646_100249676 417
211 3300026121 Ga0207683_10233413 Ga0207683_102334132 417
212 3300027357 Ga0209589_1000002 Ga0209589_1000002324 417
213 3300027361 Ga0209489_100002 Ga0209489_100002324 417
214 3300027363 Ga0209700_100002 Ga0209700_100002324 417
215 3300037471 Ga0395905_0000042 Ga0395905_0000042_243017_244309 417
216 3300002067 JGI24735J21928_10001680 JGI24735J21928_100016807 418
217 3300003214 JGI25165J46597_1007630 JGI25165J46597_10076301 418
218 3300005288 Ga0065714_10066905 Ga0065714_100669055 418
219 3300005367 Ga0070667_100002136 Ga0070667_1000021362 418
220 3300005436 Ga0070713_100058031 Ga0070713_1000580313 418
221 3300005436 Ga0070713_100099101 Ga0070713_1000991012 418
222 3300005439 Ga0070711_100107980 Ga0070711_1001079802 418
223 3300005444 Ga0070694_100095312 Ga0070694_1000953123 418
224 3300005457 Ga0070662_100061188 Ga0070662_1000611883 418
225 3300005467 Ga0070706_100020577 Ga0070706_1000205777 418
226 3300005471 Ga0070698_100157479 Ga0070698_1001574792 418
227 3300005539 Ga0068853_100012441 Ga0068853_1000124414 418
228 3300005563 Ga0068855_100001880 Ga0068855_10000188012 418
229 3300005577 Ga0068857_100031430 Ga0068857_1000314305 418
230 3300005578 Ga0068854_100001796 Ga0068854_1000017967 418
231 3300005617 Ga0068859_100369197 Ga0068859_1003691971 418
232 3300005937 Ga0081455_10001445 Ga0081455_1000144511 418
233 3300005983 Ga0081540_1028603 Ga0081540_10286033 418
234 3300006038 Ga0075365_10042016 Ga0075365_100420162 418
235 3300006186 Ga0075369_10000058 Ga0075369_1000005811 418
236 3300006353 Ga0075370_10022588 Ga0075370_100225883 418
237 3300006358 Ga0068871_100040314 Ga0068871_1000403142 418
238 3300006931 Ga0097620_100369199 Ga0097620_1003691991 418
239 3300010375 Ga0105239_10024172 Ga0105239_100241725 418
240 3300025910 Ga0207684_10161652 Ga0207684_101616522 418
241 3300025913 Ga0207695_10006468 Ga0207695_1000646812 418
242 3300025928 Ga0207700_10042588 Ga0207700_100425883 418
243 3300025928 Ga0207700_10158442 Ga0207700_101584422 418
244 3300025929 Ga0207664_10177706 Ga0207664_101777061 418
245 3300025945 Ga0207679_10099259 Ga0207679_100992592 418
246 3300025949 Ga0207667_10000343 Ga0207667_1000034315 418
247 3300025949 Ga0207667_10025875 Ga0207667_100258752 418
248 3300025986 Ga0207658_10003527 Ga0207658_100035272 418
249 3300026041 Ga0207639_10148421 Ga0207639_101484212 418
250 3300027614 Ga0209970_1001103 Ga0209970_10011034 418
251 3300028794 Ga0307515_10167519 Ga0307515_101675193 418
252 3300031911 Ga0307412_10003856 Ga0307412_100038568 418
253 3300033180 Ga0307510_10122584 Ga0307510_101225843 418
254 3300033442 Ga0315911_1000003 Ga0315911_1000003188 418
255 3300037312 Ga0395899_0062134 Ga0395899_0062134_357_1616 418
256 3300037418 Ga0395900_0163738 Ga0395900_0163738_226_1485 418
257 3300039447 Ga0436361_0090117 Ga0436361_0090117_645_1907 418
258 3300039450 Ga0436363_1092732 Ga0436363_1092732_152_1411 418
259 3300041405 Ga0439438_000037 Ga0439438_000037_54714_55973 418
260 3300041407 Ga0439447_000062 Ga0439447_000062_10809_12068 418
261 3300042009 Ga0439451_000016 Ga0439451_000016_25652_26911 418
262 3300046522 Ga0495643_0015430 Ga0495643_0015430_587_1864 418
263 3300046524 Ga0495648_0020846 Ga0495648_0020846_210_1475 418
264 3300047320 Ga0495672_0078440 Ga0495672_0078440_538_1803 418
265 3300048905 Ga0496102_0053212 Ga0496102_0053212_1725_2984 418
266 3300048929 Ga0496126_0064732 Ga0496126_0064732_344_1741 418
267 3300050492 nmdc:mga0yw44_29281_c1 nmdc:mga0yw44_29281_c1_1520_2779 418
268 3300050494 nmdc:mga06z11_21866_c1 nmdc:mga06z11_21866_c1_230_1489 418
269 3300050496 nmdc:mga07m45_7816_c1 nmdc:mga07m45_7816_c1_1891_3186 418
270 3300050509 nmdc:mga0qj67_180864_c1 nmdc:mga0qj67_180864_c1_326_1591 418
271 3300050516 nmdc:mga0sz30_116_c1 nmdc:mga0sz30_116_c1_6063_7322 418
272 3300053080 Ga0500635_0003059 Ga0500635_0003059_409_1674 418
273 3300053139 Ga0500568_0009856 Ga0500568_0009856_1902_3161 418
274 3300053177 Ga0500636_0027672 Ga0500636_0027672_420_1682 418
275 3300053178 Ga0500637_0000458 Ga0500637_0000458_11363_12628 418
276 iso_pu_bacteria 2513237087 2513592760 418

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00355

Rieske

Rieske [2Fe-2S] domain

87

175

0.94

PF00848

Ring_hydroxyl_A

Ring hydroxylating alpha subunit (catalytic domain)

218

464

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xbp-assembly1.cif.gz_G oxygenase component of 3-nitrotoluene dioxygenase from diaphorobacter sp. strain ds2 0.8663 11 418
5aeu-assembly1.cif.gz_C crystal structure of ii9 variant of biphenyl dioxygenase from burkholderia xenovorans lb400 0.8657 10 416
1eg9-assembly1.cif.gz_A naphthalene 1,2-dioxygenase with indole bound in the active site. 0.8639 8 418
2hml-assembly1.cif.gz_A crystal structure of the naphthalene 1,2-dioxygenase f352v mutant bound to phenanthrene. 0.8623 8 418
5aew-assembly1.cif.gz_W crystal structure of ii9 variant of biphenyl dioxygenase from burkholderia xenovorans lb400 in complex with biphenyl 0.8591 10 418
ID Description Score Start End Superfamily
2b1xA02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9473 41 164 2.102.10.10
2xrxU02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.941 41 164 2.102.10.10
2ckfA02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9398 40 158 2.102.10.10
2xrxU02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9336 41 164 2.102.10.10
2b1xA02 Mainly Beta;3-layer Sandwich;Rieske Iron-sulfur Protein;Rieske [2Fe-2S] iron-sulphur domain 0.9259 41 164 2.102.10.10
ID Description Score Start End GO Terms
AF-G7CC02-F1-model_v4 Dioxygenase large subunit 0.9862 13 418 GO:0005506
GO:0051213
GO:0051537
AF-A0A382W5S4-F1-model_v4 Rieske domain-containing protein 0.9852 19 118 GO:0005506
GO:0016491
GO:0051537
AF-A0A7Z9U915-F1-model_v4 Aromatic ring-hydroxylating dioxygenase subunit alpha 0.9848 5 112 GO:0046872
GO:0051213
GO:0051537
AF-A0A4Q3PIV6-F1-model_v4 deleted 0.9834 1 378
AF-A0A6N3RZR9-F1-model_v4 deleted 0.9816 258 418

Feature Viewer

pLDDT pTM Quality
93.2 0.92 High
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Predicted Structure (AlphaFold2)

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