F381205

General Info

Members Datasets Scaffolds Average Seq Length
276 189 553 109

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100734373|Ga0307408_1007343732
Length 120
Sequence MRITRRVAKRDSLPEGDLDEFGRFSEPALLILISIADGPKHGYAMTEDIASMADIALGPGTLYGALARLEARGLIESIGAEDRRNPYRMTALGDKALRLRLSTLEAVARAGRKRLAASHA

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
76 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
125 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
126 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
127 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
128 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
129 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
130 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
131 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
132 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
135 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
136 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
137 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
138 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
144 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
145 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
146 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
147 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
170 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
171 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
181 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
186 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
187 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.83
Metatranscriptomes 2.17
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.25
Nodule 0
Rhizoplane 1.81
Rhizosphere 88.04
Stem 0
Stem Tuber 0
Unclassified 33.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100734373 3300031548 Bacteria 890
2 JGI24751J29686_10037170 3300002459 Unclassified 1008
3 rootH2_10106473 3300003320 Bacteria 1992
4 rootH1_10118784 3300003316 Bacteria 1134
5 rootH1_10118784 3300003323 Unclassified 1831
6 rootH1_10219666 3300003323 Bacteria 3046
7 Ga0065712_10169712 3300005290 Bacteria 1251
8 Ga0065707_10005813 3300005295 Bacteria 3425
9 Ga0065707_10222687 3300005295 Bacteria 1219
10 Ga0065707_10561967 3300005295 Unclassified 714
11 Ga0070676_11172413 3300005328 Bacteria 583
12 Ga0070683_100928415 3300005329 Unclassified 835
13 Ga0070670_100030424 3300005331 Bacteria 4649
14 Ga0070670_100662043 3300005331 Bacteria 937
15 Ga0070670_100789889 3300005331 Bacteria 857
16 Ga0068869_101210168 3300005334 Unclassified 664
17 Ga0070680_100103574 3300005336 Bacteria 2364
18 Ga0070680_100183574 3300005336 Bacteria 1762
19 Ga0070682_100307138 3300005337 Bacteria 1166
20 Ga0070687_100759942 3300005343 Unclassified 683
21 Ga0070687_100847066 3300005343 Bacteria 651
22 Ga0070661_100744426 3300005344 Bacteria 801
23 Ga0070669_101501105 3300005353 Bacteria 586
24 Ga0070675_100117004 3300005354 Bacteria 2261
25 Ga0070675_100949652 3300005354 Bacteria 789
26 Ga0070674_100155380 3300005356 Bacteria 1731
27 Ga0070673_100194850 3300005364 Bacteria 1742
28 Ga0070688_101682148 3300005365 Bacteria 519
29 Ga0070659_100249423 3300005366 Bacteria 1471
30 Ga0070713_100423020 3300005436 Bacteria 1247
31 Ga0070700_101955748 3300005441 Unclassified 508
32 Ga0070700_102011746 3300005441 Unclassified 501
33 Ga0070694_100072735 3300005444 Bacteria 2372
34 Ga0070694_100446694 3300005444 Bacteria 1020
35 Ga0070708_100118764 3300005445 Bacteria 2436
36 Ga0070678_100484253 3300005456 Unclassified 1089
37 Ga0070681_10188961 3300005458 Bacteria 1980
38 Ga0070681_10197883 3300005458 Bacteria 1928
39 Ga0070706_100343916 3300005467 Bacteria 1391
40 Ga0070707_100004752 3300005468 Bacteria 12720
41 Ga0070707_101083472 3300005468 Bacteria 767
42 Ga0070698_100509887 3300005471 Bacteria 1141
43 Ga0070698_101060662 3300005471 Bacteria 758
44 Ga0070699_100000393 3300005518 Bacteria 42490
45 Ga0070699_100019138 3300005518 Bacteria 5890
46 Ga0070679_100053714 3300005530 Bacteria 4010
47 Ga0070697_100102163 3300005536 Bacteria 2382
48 Ga0070697_100433836 3300005536 Unclassified 1143
49 Ga0070697_100563414 3300005536 Bacteria 1000
50 Ga0070672_100814168 3300005543 Unclassified 822
51 Ga0070686_100531583 3300005544 Bacteria 917
52 Ga0070695_100272247 3300005545 Bacteria 1241
53 Ga0070696_100017815 3300005546 Bacteria 4795
54 Ga0070696_101898854 3300005546 Unclassified 516
55 Ga0070693_100350569 3300005547 Bacteria 1010
56 Ga0070704_100165362 3300005549 Bacteria 1754
57 Ga0070664_102077077 3300005564 Unclassified 539
58 Ga0068859_100758691 3300005617 Bacteria 1059
59 Ga0068864_100616700 3300005618 Unclassified 1054
60 Ga0068862_101165655 3300005844 Bacteria 768
61 Ga0081455_10080472 3300005937 Unclassified 2670
62 Ga0075368_10035237 3300006042 Bacteria 1952
63 Ga0075364_10000716 3300006051 Bacteria 17323
64 Ga0075364_10016873 3300006051 Bacteria 4550
65 Ga0075362_10000573 3300006177 Bacteria 10752
66 Ga0075362_10471788 3300006177 Bacteria 639
67 Ga0075367_10067186 3300006178 Bacteria 2149
68 Ga0075367_10133455 3300006178 Bacteria 1535
69 Ga0075367_10685848 3300006178 Bacteria 652
70 Ga0075366_10008506 3300006195 Bacteria 5710
71 Ga0075366_10029910 3300006195 Bacteria 3200
72 Ga0097621_100512015 3300006237 Bacteria 1088
73 Ga0068871_100075357 3300006358 Bacteria 2785
74 Ga0075428_100307991 3300006844 Bacteria 1702
75 Ga0075428_100976372 3300006844 Bacteria 897
76 Ga0075428_101574735 3300006844 Bacteria 687
77 Ga0075430_100157088 3300006846 Bacteria 1893
78 Ga0075430_100458405 3300006846 Bacteria 1052
79 Ga0075431_100084183 3300006847 Bacteria 3283
80 Ga0075431_100553165 3300006847 Unclassified 1138
81 Ga0075433_10133925 3300006852 Bacteria 2202
82 Ga0075433_10209600 3300006852 Unclassified 1732
83 Ga0075433_10220381 3300006852 Bacteria 1685
84 Ga0075434_100889489 3300006871 Bacteria 906
85 Ga0075434_101344056 3300006871 Unclassified 725
86 Ga0068865_100346535 3300006881 Unclassified 1202
87 Ga0068865_100916204 3300006881 Bacteria 763
88 Ga0068865_101563279 3300006881 Bacteria 592
89 Ga0097620_100758760 3300006931 Bacteria 1059
90 Ga0111539_10108918 3300009094 Unclassified 3251
91 Ga0111539_10704828 3300009094 Bacteria 1175
92 Ga0111539_11219514 3300009094 Bacteria 874
93 Ga0111539_12226607 3300009094 Unclassified 636
94 Ga0105247_10627435 3300009101 Unclassified 800
95 Ga0114129_10027163 3300009147 Bacteria 8102
96 Ga0114129_11299940 3300009147 Bacteria 901
97 Ga0114129_11778631 3300009147 Unclassified 750
98 Ga0114129_12011008 3300009147 Bacteria 699
99 Ga0105243_10523573 3300009148 Bacteria 1128
100 Ga0105243_10950784 3300009148 Bacteria 858
101 Ga0105242_10637370 3300009176 Unclassified 1035
102 Ga0105248_10963178 3300009177 Bacteria 964
103 Ga0105248_13317950 3300009177 Unclassified 512
104 Ga0105249_12491367 3300009553 Unclassified 590
105 Ga0105246_11400275 3300011119 Unclassified 652
106 Ga0105246_11666234 3300011119 Bacteria 605
107 Ga0157374_10920245 3300013296 Bacteria 892
108 Ga0157378_11636556 3300013297 Unclassified 690
109 Ga0157372_12810614 3300013307 Bacteria 558
110 Ga0157375_11603221 3300013308 Unclassified 769
111 Ga0163163_10260080 3300014325 Bacteria 1786
112 Ga0157380_10026002 3300014326 Bacteria 4443
113 Ga0157377_10086347 3300014745 Bacteria 1844
114 Ga0157376_10259665 3300014969 Bacteria 1627
115 Ga0157376_11049105 3300014969 Bacteria 839
116 Ga0197907_10568212 3300020069 Unclassified 578
117 Ga0206355_1689598 3300020076 Unclassified 641
118 Ga0206350_10922238 3300020080 Unclassified 646
119 Ga0206354_11641443 3300020081 Unclassified 590
120 Ga0154015_1536813 3300020610 Unclassified 631
121 Ga0224712_10082272 3300022467 Bacteria 1331
122 Ga0207688_11047613 3300025901 Unclassified 515
123 Ga0207643_10106646 3300025908 Bacteria 1647
124 Ga0207684_10055310 3300025910 Bacteria 3367
125 Ga0207707_10012757 3300025912 Bacteria 7308
126 Ga0207660_10358146 3300025917 Bacteria 1170
127 Ga0207660_10365314 3300025917 Bacteria 1158
128 Ga0207652_10112190 3300025921 Bacteria 2419
129 Ga0207652_10140100 3300025921 Bacteria 2162
130 Ga0207646_10006549 3300025922 Bacteria 12024
131 Ga0207650_10535254 3300025925 Unclassified 981
132 Ga0207659_10075921 3300025926 Unclassified 2468
133 Ga0207659_10312261 3300025926 Unclassified 1295
134 Ga0207700_10355449 3300025928 Unclassified 1276
135 Ga0207700_10979115 3300025928 Unclassified 757
136 Ga0207664_10860368 3300025929 Bacteria 815
137 Ga0207644_10155451 3300025931 Unclassified 1773
138 Ga0207690_10015262 3300025932 Bacteria 4651
139 Ga0207686_10328171 3300025934 Unclassified 1146
140 Ga0207709_10261101 3300025935 Unclassified 1270
141 Ga0207709_11805802 3300025935 Bacteria 509
142 Ga0207669_10162887 3300025937 Unclassified 1578
143 Ga0207704_10168762 3300025938 Unclassified 1567
144 Ga0207704_10650876 3300025938 Bacteria 868
145 Ga0207711_11672867 3300025941 Unclassified 580
146 Ga0207689_10177981 3300025942 Bacteria 1754
147 Ga0207661_10860512 3300025944 Unclassified 835
148 Ga0207661_10870060 3300025944 Bacteria 830
149 Ga0207651_10839644 3300025960 Bacteria 816
150 Ga0207651_11957110 3300025960 Bacteria 527
151 Ga0207712_10514533 3300025961 Unclassified 1025
152 Ga0207658_10944925 3300025986 Bacteria 786
153 Ga0207703_11821775 3300026035 Bacteria 585
154 Ga0207678_10337398 3300026067 Unclassified 1298
155 Ga0207676_10169251 3300026095 Bacteria 1902
156 Ga0207676_10244781 3300026095 Bacteria 1611
157 Ga0207675_100060423 3300026118 Unclassified 3538
158 Ga0209983_1158494 3300027665 Bacteria 519
159 Ga0209971_1106064 3300027682 Bacteria 689
160 Ga0207428_10340695 3300027907 Bacteria 1104
161 Ga0268266_11658672 3300028379 Bacteria 615
162 Ga0265338_10017324 3300028800 Bacteria 7775
163 Ga0265340_10397668 3300031247 Bacteria 608
164 Ga0307408_100127878 3300031548 Bacteria 1978
165 Ga0307408_100278159 3300031548 Bacteria 1393
166 Ga0307516_10000436 3300031730 Bacteria 54920
167 Ga0307405_10324866 3300031731 Unclassified 1177
168 Ga0307413_10042004 3300031824 Bacteria 2683
169 Ga0307410_10246333 3300031852 Unclassified 1387
170 Ga0307410_11326643 3300031852 Unclassified 630
171 Ga0307406_10251692 3300031901 Unclassified 1331
172 Ga0307406_10280986 3300031901 Bacteria 1270
173 Ga0307406_11227779 3300031901 Bacteria 652
174 Ga0307407_10044965 3300031903 Unclassified 2492
175 Ga0307412_10050529 3300031911 Bacteria 2744
176 Ga0307412_10349275 3300031911 Bacteria 1187
177 Ga0307409_100051294 3300031995 Bacteria 3156
178 Ga0307409_101326571 3300031995 Bacteria 745
179 Ga0307416_100022883 3300032002 Bacteria 4522
180 Ga0307416_100137373 3300032002 Bacteria 2214
181 Ga0307416_100221991 3300032002 Unclassified 1813
182 Ga0307416_100821031 3300032002 Bacteria 1026
183 Ga0307416_101195739 3300032002 Unclassified 866
184 Ga0307411_10028287 3300032005 Bacteria 3406
185 Ga0307411_12176461 3300032005 Unclassified 520
186 Ga0307415_100013187 3300032126 Bacteria 4816
187 Ga0307415_100038965 3300032126 Bacteria 3136
188 Ga0307415_100094917 3300032126 Bacteria 2170
189 Ga0307415_102092371 3300032126 Unclassified 552
190 Ga0373934_0005497 3300035086 Bacteria 4689
191 Ga0373953_0259276 3300035117 Unclassified 756
192 Ga0373953_0347992 3300035117 Unclassified 649
193 Ga0373954_0347000 3300035118 Unclassified 733
194 Ga0373956_0013219 3300035119 Bacteria 3433
195 Ga0373957_0016285 3300035120 Bacteria 2572
196 Ga0373955_0018011 3300035172 Bacteria 3504
197 Ga0373955_0490090 3300035172 Bacteria 750
198 Ga0373933_0012838 3300035724 Bacteria 4632
199 Ga0373937_0001854 3300036401 Bacteria 17756
200 Ga0373937_0119060 3300036401 Bacteria 2460
201 Ga0242420_048773 3300038996 Unclassified 824
202 Ga0436365_1355249 3300039437 Unclassified 673
203 Ga0451843_1231083 3300041509 Bacteria 896
204 Ga0451855_0155362 3300041511 Bacteria 720
205 Ga0451853_1403487 3300041512 Unclassified 1325
206 Ga0439435_0306189 3300042436 Bacteria 545
207 Ga0466971_0163856 3300044719 Unclassified 1041
208 Ga0466959_0550708 3300045049 Bacteria 778
209 Ga0466958_0221156 3300045836 Unclassified 1208
210 Ga0495629_0099608 3300046459 Bacteria 2028
211 Ga0495638_0119346 3300046460 Bacteria 1560
212 Ga0495638_0557137 3300046460 Bacteria 569
213 Ga0495653_0055947 3300046463 Bacteria 3009
214 Ga0495664_0188368 3300046477 Bacteria 1251
215 Ga0495594_0882818 3300046499 Unclassified 503
216 Ga0495587_0251091 3300046536 Unclassified 994
217 Ga0495667_0904723 3300046559 Unclassified 541
218 Ga0495656_0657835 3300046615 Bacteria 563
219 Ga0495599_0355251 3300046678 Unclassified 878
220 Ga0495658_0194925 3300046683 Unclassified 1261
221 Ga0495676_0841578 3300047321 Archaea 589
222 Ga0495676_0952243 3300047321 Unclassified 549
223 Ga0495680_0299490 3300047322 Unclassified 1129
224 Ga0496103_0359219 3300048906 Bacteria 936
225 Ga0496110_1867248 3300048913 Unclassified 511
226 Ga0496112_0071535 3300048915 Bacteria 3428
227 Ga0496112_0321858 3300048915 Bacteria 1491
228 Ga0496113_0039050 3300048916 Bacteria 3493
229 Ga0501034_1157866 3300049571 Unclassified 653
230 Ga0501036_0464452 3300049572 Unclassified 1054
231 Ga0501037_0244993 3300049573 Bacteria 1255
232 Ga0501039_1366440 3300049575 Bacteria 546
233 Ga0501047_0966476 3300049581 Unclassified 665
234 Ga0501048_0731068 3300049582 Bacteria 711
235 Ga0501048_1194840 3300049582 Unclassified 547
236 Ga0501067_0136007 3300049583 Bacteria 1368
237 Ga0501068_0134832 3300049584 Bacteria 1546
238 Ga0501069_0244001 3300049585 Bacteria 1047
239 Ga0501070_1182432 3300049586 Bacteria 587
240 Ga0501072_1438870 3300049588 Unclassified 533
241 Ga0501073_0426924 3300049589 Unclassified 916
242 Ga0501076_0615748 3300049592 Unclassified 896
243 Ga0501077_1034844 3300049593 Unclassified 528
244 Ga0501217_132136 3300049661 Unclassified 733
245 Ga0501080_0954703 3300049742 Bacteria 745
246 Ga0501080_1540631 3300049742 Unclassified 564
247 Ga0501035_0920701 3300049822 Bacteria 691
248 Ga0501044_0016584 3300049823 Bacteria 7906
249 Ga0501045_0023041 3300049824 Bacteria 4461
250 Ga0501045_0755792 3300049824 Bacteria 716
251 nmdc:mga03683_326058_c1 3300050489 Bacteria 724
252 nmdc:mga03683_421605_c1 3300050489 Bacteria 639
253 nmdc:mga03683_96543_c1 3300050489 Unclassified 1294
254 nmdc:mga00v17_54150_c1 3300050491 Bacteria 2447
255 nmdc:mga00v17_58730_c1 3300050491 Bacteria 879
256 nmdc:mga06z11_295747_c1 3300050494 Bacteria 962
257 nmdc:mga06z11_581418_c1 3300050494 Bacteria 681
258 nmdc:mga05p37_1445385_c1 3300050507 Unclassified 689
259 nmdc:mga05p37_86866_c1 3300050507 Bacteria 3855
260 nmdc:mga06r32_177829_c1 3300050510 Bacteria 2113
261 nmdc:mga06r32_242044_c1 3300050510 Bacteria 1791
262 nmdc:mga06r32_298374_c1 3300050510 Bacteria 1597
263 nmdc:mga06r32_648133_c1 3300050510 Bacteria 1024
264 nmdc:mga08y16_2126721_c1 3300050511 Bacteria 509
265 nmdc:mga08y16_226095_c1 3300050511 Bacteria 1936
266 nmdc:mga08y16_84699_c1 3300050511 Unclassified 3304
267 nmdc:mga0n895_1219930_c1 3300050512 Unclassified 725
268 nmdc:mga0n895_1347556_c1 3300050512 Unclassified 683
269 nmdc:mga0rr50_421058_c1 3300050513 Unclassified 1130
270 nmdc:mga0a205_135289_c1 3300050515 Unclassified 2365
271 nmdc:mga0a205_20598_c1 3300050515 Bacteria 6226
272 nmdc:mga0a205_67714_c1 3300050515 Bacteria 3449
273 Ga0500644_0399397 3300053088 Bacteria 599
274 Ga0500607_175797 3300053121 Bacteria 957
275 Ga0500637_0049925 3300053178 Bacteria 2382
276 Ga0501084_1646729 3300054114 Bacteria 536
277 Ga0530510_0866275 3300061734 Bacteria 690
278 Ga0307408_100734373
279 JGI24751J29686_10037170
280 rootH2_10106473
281 rootH1_10118784
282 rootH1_10219666
283 Ga0065712_10169712
284 Ga0065707_10005813
285 Ga0065707_10222687
286 Ga0065707_10561967
287 Ga0070676_11172413
288 Ga0070683_100928415
289 Ga0070670_100030424
290 Ga0070670_100662043
291 Ga0070670_100789889
292 Ga0068869_101210168
293 Ga0070680_100103574
294 Ga0070680_100183574
295 Ga0070682_100307138
296 Ga0070687_100759942
297 Ga0070687_100847066
298 Ga0070661_100744426
299 Ga0070669_101501105
300 Ga0070675_100117004
301 Ga0070675_100949652
302 Ga0070674_100155380
303 Ga0070673_100194850
304 Ga0070688_101682148
305 Ga0070659_100249423
306 Ga0070713_100423020
307 Ga0070700_101955748
308 Ga0070700_102011746
309 Ga0070694_100072735
310 Ga0070694_100446694
311 Ga0070708_100118764
312 Ga0070678_100484253
313 Ga0070681_10188961
314 Ga0070681_10197883
315 Ga0070706_100343916
316 Ga0070707_100004752
317 Ga0070707_101083472
318 Ga0070698_100509887
319 Ga0070698_101060662
320 Ga0070699_100000393
321 Ga0070699_100019138
322 Ga0070679_100053714
323 Ga0070697_100102163
324 Ga0070697_100433836
325 Ga0070697_100563414
326 Ga0070672_100814168
327 Ga0070686_100531583
328 Ga0070695_100272247
329 Ga0070696_100017815
330 Ga0070696_101898854
331 Ga0070693_100350569
332 Ga0070704_100165362
333 Ga0070664_102077077
334 Ga0068859_100758691
335 Ga0068864_100616700
336 Ga0068862_101165655
337 Ga0081455_10080472
338 Ga0075368_10035237
339 Ga0075364_10000716
340 Ga0075364_10016873
341 Ga0075362_10000573
342 Ga0075362_10471788
343 Ga0075367_10067186
344 Ga0075367_10133455
345 Ga0075367_10685848
346 Ga0075366_10008506
347 Ga0075366_10029910
348 Ga0097621_100512015
349 Ga0068871_100075357
350 Ga0075428_100307991
351 Ga0075428_100976372
352 Ga0075428_101574735
353 Ga0075430_100157088
354 Ga0075430_100458405
355 Ga0075431_100084183
356 Ga0075431_100553165
357 Ga0075433_10133925
358 Ga0075433_10209600
359 Ga0075433_10220381
360 Ga0075434_100889489
361 Ga0075434_101344056
362 Ga0068865_100346535
363 Ga0068865_100916204
364 Ga0068865_101563279
365 Ga0097620_100758760
366 Ga0111539_10108918
367 Ga0111539_10704828
368 Ga0111539_11219514
369 Ga0111539_12226607
370 Ga0105247_10627435
371 Ga0114129_10027163
372 Ga0114129_11299940
373 Ga0114129_11778631
374 Ga0114129_12011008
375 Ga0105243_10523573
376 Ga0105243_10950784
377 Ga0105242_10637370
378 Ga0105248_10963178
379 Ga0105248_13317950
380 Ga0105249_12491367
381 Ga0105246_11400275
382 Ga0105246_11666234
383 Ga0157374_10920245
384 Ga0157378_11636556
385 Ga0157372_12810614
386 Ga0157375_11603221
387 Ga0163163_10260080
388 Ga0157380_10026002
389 Ga0157377_10086347
390 Ga0157376_10259665
391 Ga0157376_11049105
392 Ga0197907_10568212
393 Ga0206355_1689598
394 Ga0206350_10922238
395 Ga0206354_11641443
396 Ga0154015_1536813
397 Ga0224712_10082272
398 Ga0207688_11047613
399 Ga0207643_10106646
400 Ga0207684_10055310
401 Ga0207707_10012757
402 Ga0207660_10358146
403 Ga0207660_10365314
404 Ga0207652_10112190
405 Ga0207652_10140100
406 Ga0207646_10006549
407 Ga0207650_10535254
408 Ga0207659_10075921
409 Ga0207659_10312261
410 Ga0207700_10355449
411 Ga0207700_10979115
412 Ga0207664_10860368
413 Ga0207644_10155451
414 Ga0207690_10015262
415 Ga0207686_10328171
416 Ga0207709_10261101
417 Ga0207709_11805802
418 Ga0207669_10162887
419 Ga0207704_10168762
420 Ga0207704_10650876
421 Ga0207711_11672867
422 Ga0207689_10177981
423 Ga0207661_10860512
424 Ga0207661_10870060
425 Ga0207651_10839644
426 Ga0207651_11957110
427 Ga0207712_10514533
428 Ga0207658_10944925
429 Ga0207703_11821775
430 Ga0207678_10337398
431 Ga0207676_10169251
432 Ga0207676_10244781
433 Ga0207675_100060423
434 Ga0209983_1158494
435 Ga0209971_1106064
436 Ga0207428_10340695
437 Ga0268266_11658672
438 Ga0265338_10017324
439 Ga0265340_10397668
440 Ga0307408_100127878
441 Ga0307408_100278159
442 Ga0307516_10000436
443 Ga0307405_10324866
444 Ga0307413_10042004
445 Ga0307410_10246333
446 Ga0307410_11326643
447 Ga0307406_10251692
448 Ga0307406_10280986
449 Ga0307406_11227779
450 Ga0307407_10044965
451 Ga0307412_10050529
452 Ga0307412_10349275
453 Ga0307409_100051294
454 Ga0307409_101326571
455 Ga0307416_100022883
456 Ga0307416_100137373
457 Ga0307416_100221991
458 Ga0307416_100821031
459 Ga0307416_101195739
460 Ga0307411_10028287
461 Ga0307411_12176461
462 Ga0307415_100013187
463 Ga0307415_100038965
464 Ga0307415_100094917
465 Ga0307415_102092371
466 Ga0373934_0005497
467 Ga0373953_0259276
468 Ga0373953_0347992
469 Ga0373954_0347000
470 Ga0373956_0013219
471 Ga0373957_0016285
472 Ga0373955_0018011
473 Ga0373955_0490090
474 Ga0373933_0012838
475 Ga0373937_0001854
476 Ga0373937_0119060
477 Ga0242420_048773
478 Ga0436365_1355249
479 Ga0451843_1231083
480 Ga0451855_0155362
481 Ga0451853_1403487
482 Ga0439435_0306189
483 Ga0466971_0163856
484 Ga0466959_0550708
485 Ga0466958_0221156
486 Ga0495629_0099608
487 Ga0495638_0119346
488 Ga0495638_0557137
489 Ga0495653_0055947
490 Ga0495664_0188368
491 Ga0495594_0882818
492 Ga0495587_0251091
493 Ga0495667_0904723
494 Ga0495656_0657835
495 Ga0495599_0355251
496 Ga0495658_0194925
497 Ga0495676_0841578
498 Ga0495676_0952243
499 Ga0495680_0299490
500 Ga0496103_0359219
501 Ga0496110_1867248
502 Ga0496112_0071535
503 Ga0496112_0321858
504 Ga0496113_0039050
505 Ga0501034_1157866
506 Ga0501036_0464452
507 Ga0501037_0244993
508 Ga0501039_1366440
509 Ga0501047_0966476
510 Ga0501048_0731068
511 Ga0501048_1194840
512 Ga0501067_0136007
513 Ga0501068_0134832
514 Ga0501069_0244001
515 Ga0501070_1182432
516 Ga0501072_1438870
517 Ga0501073_0426924
518 Ga0501076_0615748
519 Ga0501077_1034844
520 Ga0501217_132136
521 Ga0501080_0954703
522 Ga0501080_1540631
523 Ga0501035_0920701
524 Ga0501044_0016584
525 Ga0501045_0023041
526 Ga0501045_0755792
527 nmdc:mga03683_326058_c1
528 nmdc:mga03683_421605_c1
529 nmdc:mga03683_96543_c1
530 nmdc:mga00v17_54150_c1
531 nmdc:mga00v17_58730_c1
532 nmdc:mga06z11_295747_c1
533 nmdc:mga06z11_581418_c1
534 nmdc:mga05p37_1445385_c1
535 nmdc:mga05p37_86866_c1
536 nmdc:mga06r32_177829_c1
537 nmdc:mga06r32_242044_c1
538 nmdc:mga06r32_298374_c1
539 nmdc:mga06r32_648133_c1
540 nmdc:mga08y16_2126721_c1
541 nmdc:mga08y16_226095_c1
542 nmdc:mga08y16_84699_c1
543 nmdc:mga0n895_1219930_c1
544 nmdc:mga0n895_1347556_c1
545 nmdc:mga0rr50_421058_c1
546 nmdc:mga0a205_135289_c1
547 nmdc:mga0a205_20598_c1
548 nmdc:mga0a205_67714_c1
549 Ga0500644_0399397
550 Ga0500607_175797
551 Ga0500637_0049925
552 Ga0501084_1646729
553 Ga0530510_0866275

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03551

PadR

Transcriptional regulator PadR-like family

31

99

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2co5-assembly1.cif.gz_A f93 from stiv, a winged-helix dna-binding protein 0.9097 16 95
5k5o-assembly1.cif.gz_C structure of aspa-26mer dna complex 0.908 17 100
5dym-assembly1.cif.gz_A-2 crystal structure of a padr family transcription regulator from hypervirulent clostridium difficile r20291 - cdpadr_0991 to 1.89 angstrom resolution 0.9047 18 105
5k5q-assembly1.cif.gz_A structure of aspa-dna complex: novel centromere bindng protein-centromere complex 0.898 17 100
1xma-assembly1.cif.gz_A structure of a transcriptional regulator from clostridium thermocellum cth-833 0.8955 18 103
ID Description Score Start End Superfamily
2co5A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9097 16 95 1.10.10.10
5dymA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9047 18 105 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8987 16 79 1.10.10.10
1xmaA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8955 18 103 1.10.10.10
af_P71704_1_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8951 18 92 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0M2RZK7-F1-model_v4 PadR family transcriptional regulator 0.9891 8 108
AF-A0A535E8Z9-F1-model_v4 PadR family transcriptional regulator 0.9854 10 106
AF-A0A1S2WMN2-F1-model_v4 deleted 0.9854 17 106
AF-A0A257VMN8-F1-model_v4 PadR family transcriptional regulator 0.9851 16 108
AF-A0A2S6GD61-F1-model_v4 PadR family transcriptional regulator 0.9817 22 108

Map