F381150

General Info

Members Datasets Scaffolds Average Seq Length
276 225 209 358

Family's Representative Sequence

Representative Sequence 3300025303|Ga0209051_1005413|Ga0209051_10054134
Length 401
Sequence LYQGVPDTLGSMVRVDTKVQWTATSTRAMRVGPRIDVESDMTRWPDRRILDLLGIEIPIIQAPMAGSTTNEMVVAAAQAGGLGSLPSALLSVDQLKGALTSIRNSTKAPLNVNFFAHHTPSFDPAVQMRWRALLAPYYIESGLDPAAPVAGAGRAPFDSAFCEVVEEFKPGIVSFHFGLPEKSLVRRVKATGAKIISSATTVSEAVWLEENGVDAVVAMGFEAGGHRGNFLTHDMFTQVGTMALVPQVVDAVNIPVIAAGGIADGRGVAAALMLGASAVQIGTAYLFCPEAKIPAVHAQALGDARDDNTAITNVFTGRPARSVVNRIMRELGPLSESVPPFPTAAAALVALKVKAEEAARSDFTNLWSGQAAKLAPRLSAGDLTRRLYQDALKVIEGRTQA

Samples

Sample ID Description Type Environment
1 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
2 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
3 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
4 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
5 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
6 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
7 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
8 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
9 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
10 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
11 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
12 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
13 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
14 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
15 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
16 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
17 2643221599 Rhizobium sp. Root708 Isolate Unclassified
18 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
19 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
20 2643221659 Ensifer sp. Root127 Isolate Unclassified
21 2643221698 Ensifer sp. Root142 Isolate Unclassified
22 2738541293 Rhizobium sp. GV031 Isolate Unclassified
23 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
24 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
25 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
26 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
27 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
28 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
29 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
30 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
31 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
32 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
33 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
34 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
35 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
36 2849560528 Caulobacter zeae 410 Isolate Unclassified
37 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
38 2851153111 Caulobacter radicis 736 Isolate Unclassified
39 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
40 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
41 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
42 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
43 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
44 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
45 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
46 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
47 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
48 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
49 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
50 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
51 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
52 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
53 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
54 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
55 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
56 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
57 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
58 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
59 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
60 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
61 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
62 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
63 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
64 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
65 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
66 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
67 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
68 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
69 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
70 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
71 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
72 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
73 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
74 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
75 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
76 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
77 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
78 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
79 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
80 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
81 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
82 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
83 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
84 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
85 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
86 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
87 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
88 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
89 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
90 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
91 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
92 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
93 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
94 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
95 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
96 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
97 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
98 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
99 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
100 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
101 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
102 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
103 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
104 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
105 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
106 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
107 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
108 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
109 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
110 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
111 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
112 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
113 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
116 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
118 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
121 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
133 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
134 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
137 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
138 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
139 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
140 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
141 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
142 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
143 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
146 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
147 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
148 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
149 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
150 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
151 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
152 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
153 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
154 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
155 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
156 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
157 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
158 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
159 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
160 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
161 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
162 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
163 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
164 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
165 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
166 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
167 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
168 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
169 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
172 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
173 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
174 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
177 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
178 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
179 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
180 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
181 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
182 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
183 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
184 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
185 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
186 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
187 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
188 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
189 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
190 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
191 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
192 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
193 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
194 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
195 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
196 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
200 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
201 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
205 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
206 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
207 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
208 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
209 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
210 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
211 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
212 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
213 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
214 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
215 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
216 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
217 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
218 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
219 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
220 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
221 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
222 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
223 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
224 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
225 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 75.72
Metatranscriptomes 0
Isolates 24.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.46
Nodule 14.13
Rhizoplane 4.35
Rhizosphere 41.3
Stem 0
Stem Tuber 0
Unclassified 17.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000711 3300002773 Bacteria 17268
2 JGI25152J39213_1001876 3300002773 Bacteria 8439
3 JGI25159J45721_1000077 3300002987 Bacteria 47586
4 JGI25159J45721_1000657 3300002987 Bacteria 15337
5 JGI25153J46596_10006606 3300003215 Bacteria 5842
6 rootL2_10104309 3300003322 Bacteria 2326
7 rootL2_10120598 3300003322 Bacteria 1424
8 rootH1_10121543 3300003323 Bacteria 7429
9 JGI25160J50197_1000001 3300003354 Bacteria 782301
10 JGI25160J50197_1011412 3300003354 Bacteria 3154
11 JGI25161J50226_1000001 3300003374 Bacteria 655036
12 JGI25161J50226_1000255 3300003374 Bacteria 31899
13 Ga0055526_1024454 3300003771 Bacteria 1975
14 Ga0055524_1002260 3300003775 Bacteria 10070
15 Ga0055524_1003060 3300003775 Bacteria 8275
16 Ga0055524_1014818 3300003775 Bacteria 2872
17 Ga0055528_1002860 3300003790 Bacteria 8991
18 Ga0055528_1034093 3300003790 Bacteria 1263
19 Ga0055540_1000336 3300003792 Bacteria 40595
20 Ga0055540_1002394 3300003792 Bacteria 9983
21 Ga0055543_1000003 3300004625 Bacteria 358656
22 Ga0055543_1000031 3300004625 Bacteria 130583
23 Ga0065165_1000469 3300005262 Bacteria 63164
24 Ga0070683_100091884 3300005329 Bacteria 2851
25 Ga0068868_100029665 3300005338 Bacteria 4190
26 Ga0070661_100023933 3300005344 Bacteria 4382
27 Ga0070671_100092488 3300005355 Bacteria 2534
28 Ga0070673_100050241 3300005364 Bacteria 3260
29 Ga0070667_100049047 3300005367 Bacteria 3555
30 Ga0070667_100429888 3300005367 Bacteria 1205
31 Ga0070714_100440200 3300005435 Bacteria 1237
32 Ga0070711_100022844 3300005439 Bacteria 4059
33 Ga0070663_100162537 3300005455 Bacteria 1720
34 Ga0068853_100207742 3300005539 Bacteria 1784
35 Ga0068853_100238879 3300005539 Bacteria 1664
36 Ga0070665_100129749 3300005548 Bacteria 2523
37 Ga0068855_100313092 3300005563 Bacteria 1736
38 Ga0068854_100071788 3300005578 Bacteria 2533
39 Ga0068852_100052320 3300005616 Bacteria 3509
40 Ga0068858_100047253 3300005842 Bacteria 3990
41 Ga0070716_100044407 3300006173 Bacteria 2489
42 Ga0070712_100038501 3300006175 Bacteria 3268
43 Ga0075366_10015037 3300006195 Bacteria 4426
44 Ga0097621_100024896 3300006237 Bacteria 4679
45 Ga0075370_10001839 3300006353 Bacteria 9502
46 Ga0079104_1017581 3300006946 Bacteria 2051
47 Ga0099826_10000166 3300006948 Bacteria 27675
48 Ga0099795_10010522 3300007788 Bacteria 2728
49 Ga0105251_10060255 3300009011 Bacteria 1787
50 Ga0105240_10259563 3300009093 Bacteria 2005
51 Ga0105248_10010811 3300009177 Bacteria 10080
52 Ga0105238_10106838 3300009551 Bacteria 2780
53 Ga0105249_10053230 3300009553 Bacteria 3700
54 Ga0099796_10023073 3300010159 Bacteria 1938
55 Ga0171462_1014 3300013250 Bacteria 198579
56 Ga0157378_10517438 3300013297 Bacteria 1194
57 Ga0157372_10318131 3300013307 Bacteria 1812
58 Ga0163163_10206878 3300014325 Bacteria 2011
59 Ga0157376_10375858 3300014969 Bacteria 1367
60 Ga0228711_1017762 3300022739 Bacteria 6975
61 Ga0228710_1000815 3300022740 Bacteria 43349
62 Ga0209436_100043 3300025208 Bacteria 71870
63 Ga0209129_1001255 3300025258 Bacteria 14555
64 Ga0209129_1008484 3300025258 Bacteria 2852
65 Ga0209673_1000005 3300025273 Bacteria 692788
66 Ga0209673_1000631 3300025273 Bacteria 53589
67 Ga0209673_1001863 3300025273 Bacteria 17115
68 Ga0209673_1027760 3300025273 Bacteria 1835
69 Ga0209130_1000003 3300025284 Bacteria 677988
70 Ga0209130_1000023 3300025284 Bacteria 359355
71 Ga0209676_1025071 3300025292 Unclassified 1919
72 Ga0209676_1026526 3300025292 Bacteria 1838
73 Ga0209025_1042766 3300025294 Bacteria 1919
74 Ga0209564_1000558 3300025295 Bacteria 59623
75 Ga0209564_1000574 3300025295 Bacteria 58286
76 Ga0209564_1005575 3300025295 Bacteria 7110
77 Ga0209564_1014640 3300025295 Bacteria 3245
78 Ga0209758_1000706 3300025297 Bacteria 49585
79 Ga0209050_1002487 3300025298 Bacteria 15596
80 Ga0209256_1000556 3300025299 Bacteria 53524
81 Ga0209256_1000688 3300025299 Bacteria 45274
82 Ga0209256_1003454 3300025299 Bacteria 11066
83 Ga0209256_1004533 3300025299 Bacteria 8657
84 Ga0207426_1000011 3300025302 Bacteria 791203
85 Ga0207426_1000087 3300025302 Bacteria 288870
86 Ga0207426_1004947 3300025302 Bacteria 6282
87 Ga0209051_1000626 3300025303 Bacteria 40647
88 Ga0209051_1003821 3300025303 Bacteria 9638
89 Ga0209051_1005413 3300025303 Bacteria 7475
90 Ga0209257_1009120 3300025304 Bacteria 5413
91 Ga0207693_10005840 3300025915 Bacteria 10213
92 Ga0207650_10165821 3300025925 Bacteria 1753
93 Ga0207665_10002248 3300025939 Bacteria 13035
94 Ga0207711_10272104 3300025941 Bacteria 1558
95 Ga0207712_10051062 3300025961 Bacteria 2890
96 Ga0207639_10325776 3300026041 Bacteria 1365
97 Ga0207678_10194485 3300026067 Bacteria 1734
98 Ga0207702_10267485 3300026078 Bacteria 1612
99 Ga0207674_10169011 3300026116 Bacteria 2140
100 Ga0209281_1000536 3300027111 Bacteria 47891
101 Ga0209282_1000123 3300027666 Bacteria 49245
102 Ga0307515_10026761 3300028794 Bacteria 9904
103 Ga0265327_10001037 3300031251 Bacteria 39182
104 Ga0307508_10020509 3300031616 Bacteria 6002
105 Ga0265314_10026627 3300031711 Bacteria 4342
106 Ga0315914_1003050 3300031967 Bacteria 25573
107 Ga0307411_10215718 3300032005 Bacteria 1485
108 Ga0315913_1000139 3300033430 Bacteria 47678
109 Ga0315915_1000275 3300033464 Bacteria 47666
110 Ga0373936_0000037 3300035113 Bacteria 98939
111 Ga0395905_0057331 3300037471 Bacteria 3644
112 Ga0395901_0017963 3300038443 Bacteria 7219
113 Ga0439465_0013611 3300041413 Bacteria 2534
114 Ga0451833_0566312 3300041491 Bacteria 3052
115 Ga0451833_0601082 3300041491 Bacteria 3084
116 Ga0451835_0201726 3300041492 Bacteria 7056
117 Ga0451837_0483681 3300041494 Bacteria 8099
118 Ga0451841_0446899 3300041498 Bacteria 2146
119 Ga0451847_0352854 3300041503 Bacteria 7014
120 Ga0451843_1683256 3300041509 Bacteria 3442
121 Ga0451855_1278474 3300041511 Bacteria 3237
122 Ga0451853_0173064 3300041512 Bacteria 3868
123 Ga0451853_0494502 3300041512 Bacteria 30179
124 Ga0439448_0046790 3300042005 Bacteria 1410
125 Ga0495617_042579 3300046452 Bacteria 1518
126 Ga0495638_0000084 3300046460 Bacteria 153168
127 Ga0495605_0009046 3300046474 Bacteria 5607
128 Ga0495607_0042535 3300046501 Bacteria 2692
129 Ga0495607_0120637 3300046501 Bacteria 1377
130 Ga0495583_0002592 3300046506 Bacteria 15150
131 Ga0495583_0019544 3300046506 Bacteria 3532
132 Ga0495583_0033120 3300046506 Bacteria 2487
133 Ga0495606_0007662 3300046507 Bacteria 9574
134 Ga0495606_0046197 3300046507 Bacteria 2880
135 Ga0495610_0000605 3300046512 Bacteria 35518
136 Ga0495610_0008403 3300046512 Bacteria 6694
137 Ga0495616_0033838 3300046513 Bacteria 2659
138 Ga0495616_0051662 3300046513 Bacteria 2049
139 Ga0495620_0013803 3300046515 Bacteria 4129
140 Ga0495631_0023683 3300046518 Bacteria 2843
141 Ga0495632_0000749 3300046519 Bacteria 29282
142 Ga0495643_0003229 3300046522 Bacteria 12080
143 Ga0495643_0063953 3300046522 Bacteria 1945
144 Ga0495643_0085800 3300046522 Bacteria 1632
145 Ga0495609_0002449 3300046538 Bacteria 11409
146 Ga0495668_0054692 3300046616 Bacteria 2205
147 Ga0495611_0040810 3300046648 Bacteria 2069
148 Ga0495625_0003309 3300046660 Bacteria 16254
149 Ga0495625_0021153 3300046660 Bacteria 5012
150 Ga0495661_0110480 3300046665 Bacteria 1533
151 Ga0495588_0041286 3300046674 Bacteria 2355
152 Ga0495613_0001713 3300046689 Bacteria 16704
153 Ga0495670_0040843 3300046691 Bacteria 2314
154 Ga0495660_0052612 3300046810 Bacteria 2212
155 Ga0495672_0040342 3300047320 Bacteria 2832
156 Ga0495687_001346 3300047443 Bacteria 22902
157 Ga0495686_0001186 3300047472 Bacteria 30396
158 Ga0495686_0107918 3300047472 Bacteria 1673
159 Ga0495626_0036477 3300048091 Bacteria 2342
160 Ga0496101_0108484 3300048904 Bacteria 2087
161 Ga0496102_0100873 3300048905 Bacteria 2681
162 Ga0496103_0056616 3300048906 Bacteria 2434
163 Ga0496105_0005927 3300048908 Bacteria 9326
164 Ga0496106_0000028 3300048909 Bacteria 143296
165 Ga0496106_0150869 3300048909 Bacteria 1833
166 Ga0496108_0049635 3300048911 Bacteria 3510
167 Ga0496109_0128206 3300048912 Bacteria 2367
168 Ga0496110_0233919 3300048913 Bacteria 1671
169 Ga0496111_0198268 3300048914 Bacteria 1492
170 Ga0496113_0126971 3300048916 Bacteria 1998
171 Ga0496114_0026167 3300048917 Bacteria 4775
172 Ga0496116_0006262 3300048919 Bacteria 10847
173 Ga0496118_0018625 3300048921 Bacteria 6248
174 Ga0496119_0082747 3300048922 Bacteria 1845
175 Ga0496120_0039456 3300048923 Bacteria 2785
176 Ga0496121_0009810 3300048924 Bacteria 10937
177 Ga0496121_0037740 3300048924 Bacteria 4286
178 Ga0496121_0098372 3300048924 Bacteria 2264
179 Ga0496121_0099384 3300048924 Bacteria 2249
180 Ga0496122_0053138 3300048925 Bacteria 3057
181 Ga0496123_0009948 3300048926 Bacteria 8480
182 Ga0496123_0028281 3300048926 Bacteria 4155
183 Ga0496124_0038155 3300048927 Bacteria 4172
184 Ga0496125_0002848 3300048928 Bacteria 21779
185 Ga0496125_0031592 3300048928 Bacteria 4716
186 Ga0496125_0093851 3300048928 Bacteria 2238
187 Ga0495682_0070633 3300049460 Bacteria 1257
188 Ga0501032_0136545 3300049569 Bacteria 1616
189 Ga0501034_0300743 3300049571 Bacteria 1541
190 Ga0501038_0295788 3300049574 Bacteria 1271
191 Ga0501073_0000232 3300049589 Bacteria 36680
192 Ga0501073_0065063 3300049589 Bacteria 2543
193 Ga0501080_0016488 3300049742 Bacteria 6824
194 Ga0501083_0098084 3300049744 Bacteria 1933
195 Ga0501083_0143437 3300049744 Bacteria 1563
196 Ga0501044_0448131 3300049823 Bacteria 1198
197 Ga0500610_0030362 3300053079 Bacteria 2739
198 Ga0500578_0059840 3300053086 Bacteria 2434
199 Ga0500651_0034828 3300053093 Bacteria 3174
200 Ga0500566_0001909 3300053094 Bacteria 12267
201 Ga0500569_024464 3300053109 Bacteria 1634
202 Ga0500658_0000790 3300053134 Bacteria 13113
203 Ga0500559_0002507 3300053136 Bacteria 9438
204 Ga0500568_0002401 3300053139 Bacteria 11058
205 Ga0500622_0000206 3300053156 Bacteria 62842
206 Ga0500633_0005505 3300053160 Bacteria 3017
207 Ga0500636_0005953 3300053177 Bacteria 6989
208 Ga0501082_0000104 3300060353 Bacteria 66425
209 Ga0501082_0225657 3300060353 Bacteria 1630

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2921250672 2921254211 315
2 3300003323 rootH1_10121543 rootH1_101215432 321
3 3300025284 Ga0209130_1000003 Ga0209130_1000003189 327
4 3300025292 Ga0209676_1025071 Ga0209676_10250712 327
5 3300025302 Ga0207426_1000011 Ga0207426_1000011587 327
6 3300006195 Ga0075366_10015037 Ga0075366_100150376 328
7 3300003322 rootL2_10104309 rootL2_101043092 335
8 3300009093 Ga0105240_10259563 Ga0105240_102595632 337
9 3300048912 Ga0496109_0128206 Ga0496109_0128206_137_1234 339
10 3300025925 Ga0207650_10165821 Ga0207650_101658212 342
11 3300035113 Ga0373936_0000037 Ga0373936_0000037_55818_56909 342
12 3300049589 Ga0501073_0000232 Ga0501073_0000232_34907_35959 343
13 iso_pu_bacteria 2791355048 2792461385 343
14 iso_pu_bacteria 2843744320 2843749180 343
15 iso_pu_bacteria 2849560528 2849564488 343
16 iso_pu_bacteria 2849573788 2849575354 343
17 iso_pu_bacteria 2851153111 2851155416 343
18 iso_pu_bacteria 2898329390 2898331249 343
19 3300049589 Ga0501073_0065063 Ga0501073_0065063_76_1134 344
20 3300005439 Ga0070711_100022844 Ga0070711_1000228444 345
21 3300009551 Ga0105238_10106838 Ga0105238_101068384 345
22 3300049574 Ga0501038_0295788 Ga0501038_0295788_106_1143 345
23 3300049742 Ga0501080_0016488 Ga0501080_0016488_4528_5565 345
24 3300049823 Ga0501044_0448131 Ga0501044_0448131_37_1074 345
25 iso_pu_bacteria 2510917022 2511136816 346
26 iso_pu_bacteria 2513237138 2513868172 346
27 iso_pu_bacteria 2513237160 2514006944 346
28 iso_pu_bacteria 2516653077 2517042038 346
29 iso_pu_bacteria 2517093000 2517098692 346
30 iso_pu_bacteria 2582581294 2585204333 346
31 iso_pu_bacteria 2582581307 2585271200 346
32 iso_pu_bacteria 2582581867 2585402728 346
33 iso_pu_bacteria 2585427531 2585558924 346
34 iso_pu_bacteria 2585427608 2585898306 346
35 iso_pu_bacteria 2585427609 2585904106 346
36 iso_pu_bacteria 2585428125 2587980777 346
37 iso_pu_bacteria 2643221599 2644005617 346
38 iso_pu_bacteria 2643221634 2644192212 346
39 iso_pu_bacteria 2643221643 2644239103 346
40 iso_pu_bacteria 2643221659 2644333945 346
41 iso_pu_bacteria 2643221698 2644541513 346
42 iso_pu_bacteria 2738541293 2738802729 346
43 iso_pu_bacteria 2802428858 2802720191 346
44 iso_pu_bacteria 2802428859 2802723883 346
45 iso_pu_bacteria 2802428860 2802733712 346
46 iso_pu_bacteria 2802428861 2802739667 346
47 iso_pu_bacteria 2802428862 2802745949 346
48 iso_pu_bacteria 2802428863 2802753350 346
49 iso_pu_bacteria 2841851746 2841858046 346
50 iso_pu_bacteria 2842509118 2842511062 346
51 iso_pu_bacteria 2844009547 2844012094 346
52 iso_pu_bacteria 2852387548 2852390292 346
53 iso_pu_bacteria 2857516855 2857522727 346
54 iso_pu_bacteria 2883354860 2883356207 346
55 iso_pu_bacteria 2894652903 2894654352 346
56 iso_pu_bacteria 2916061851 2916065637 346
57 iso_pu_bacteria 2923556063 2923560471 346
58 iso_pu_bacteria 2937029754 2937033897 346
59 iso_pu_bacteria 2937036028 2937037547 346
60 iso_pu_bacteria 2937078374 2937080434 346
61 iso_pu_bacteria 2937084907 2937089845 346
62 iso_pu_bacteria 2957437181 2957443433 346
63 iso_pu_bacteria 2960591022 2960595824 346
64 iso_pu_bacteria 2960631154 2960637847 346
65 iso_pu_bacteria 2967728569 2967728723 346
66 iso_pu_bacteria 2970026789 2970033002 346
67 iso_pu_bacteria 2970122695 2970129133 346
68 iso_pu_bacteria 2977544691 2977549027 346
69 iso_pu_bacteria 3005445848 3005451404 346
70 iso_pu_bacteria 3005452660 3005455013 346
71 iso_pu_bacteria 643348564 643598586 346
72 iso_pu_bacteria 8005542996 8005546413 346
73 iso_pu_bacteria 8005682033 8005688361 346
74 iso_pu_bacteria 8046767195 8046771154 346
75 iso_pu_bacteria 8056375014 8056377452 346
76 iso_pu_bacteria 8057575449 8057575672 346
77 3300013297 Ga0157378_10517438 Ga0157378_105174381 347
78 3300031616 Ga0307508_10020509 Ga0307508_100205097 347
79 3300048924 Ga0496121_0099384 Ga0496121_0099384_567_1622 347
80 iso_pu_bacteria 2510917030 2511197451 347
81 iso_pu_bacteria 2582581298 2585225049 347
82 iso_pu_bacteria 2585427529 2585547605 347
83 iso_pu_bacteria 2808606390 2809006004 347
84 iso_pu_bacteria 2808606391 2809013060 347
85 iso_pu_bacteria 2919100787 2919105799 347
86 iso_pu_bacteria 3005445848 3005449020 347
87 3300053094 Ga0500566_0001909 Ga0500566_0001909_3755_4837 348
88 3300005329 Ga0070683_100091884 Ga0070683_1000918843 349
89 3300005338 Ga0068868_100029665 Ga0068868_1000296652 349
90 3300005344 Ga0070661_100023933 Ga0070661_1000239335 349
91 3300005364 Ga0070673_100050241 Ga0070673_1000502412 349
92 3300005367 Ga0070667_100049047 Ga0070667_1000490471 349
93 3300005539 Ga0068853_100238879 Ga0068853_1002388793 349
94 3300005563 Ga0068855_100313092 Ga0068855_1003130923 349
95 3300005578 Ga0068854_100071788 Ga0068854_1000717882 349
96 3300005616 Ga0068852_100052320 Ga0068852_1000523205 349
97 3300005842 Ga0068858_100047253 Ga0068858_1000472533 349
98 3300006237 Ga0097621_100024896 Ga0097621_1000248964 349
99 3300013307 Ga0157372_10318131 Ga0157372_103181312 349
100 3300014325 Ga0163163_10206878 Ga0163163_102068782 349
101 3300014969 Ga0157376_10375858 Ga0157376_103758582 349
102 3300026041 Ga0207639_10325776 Ga0207639_103257762 349
103 3300026116 Ga0207674_10169011 Ga0207674_101690114 349
104 3300042005 Ga0439448_0046790 Ga0439448_0046790_156_1205 349
105 3300002773 JGI25152J39213_1001876 JGI25152J39213_10018765 350
106 3300002987 JGI25159J45721_1000077 JGI25159J45721_100007717 350
107 3300003322 rootL2_10120598 rootL2_101205982 350
108 3300003354 JGI25160J50197_1000001 JGI25160J50197_1000001588 350
109 3300003354 JGI25160J50197_1011412 JGI25160J50197_10114121 350
110 3300003374 JGI25161J50226_1000001 JGI25161J50226_1000001167 350
111 3300003771 Ga0055526_1024454 Ga0055526_10244542 350
112 3300003775 Ga0055524_1003060 Ga0055524_10030608 350
113 3300003775 Ga0055524_1014818 Ga0055524_10148183 350
114 3300003790 Ga0055528_1002860 Ga0055528_10028603 350
115 3300003790 Ga0055528_1034093 Ga0055528_10340931 350
116 3300003792 Ga0055540_1000336 Ga0055540_100033629 350
117 3300004625 Ga0055543_1000003 Ga0055543_1000003183 350
118 3300005262 Ga0065165_1000469 Ga0065165_100046917 350
119 3300005355 Ga0070671_100092488 Ga0070671_1000924881 350
120 3300005367 Ga0070667_100429888 Ga0070667_1004298881 350
121 3300005435 Ga0070714_100440200 Ga0070714_1004402001 350
122 3300005455 Ga0070663_100162537 Ga0070663_1001625372 350
123 3300005539 Ga0068853_100207742 Ga0068853_1002077422 350
124 3300006173 Ga0070716_100044407 Ga0070716_1000444073 350
125 3300006175 Ga0070712_100038501 Ga0070712_1000385013 350
126 3300006353 Ga0075370_10001839 Ga0075370_100018399 350
127 3300006946 Ga0079104_1017581 Ga0079104_10175811 350
128 3300006948 Ga0099826_10000166 Ga0099826_1000016619 350
129 3300007788 Ga0099795_10010522 Ga0099795_100105223 350
130 3300009011 Ga0105251_10060255 Ga0105251_100602552 350
131 3300009177 Ga0105248_10010811 Ga0105248_100108114 350
132 3300009553 Ga0105249_10053230 Ga0105249_100532302 350
133 3300010159 Ga0099796_10023073 Ga0099796_100230732 350
134 3300013250 Ga0171462_1014 Ga0171462_1014143 350
135 3300022739 Ga0228711_1017762 Ga0228711_10177626 350
136 3300022740 Ga0228710_1000815 Ga0228710_100081537 350
137 3300025258 Ga0209129_1008484 Ga0209129_10084843 350
138 3300025273 Ga0209673_1000631 Ga0209673_100063129 350
139 3300025273 Ga0209673_1027760 Ga0209673_10277602 350
140 3300025292 Ga0209676_1026526 Ga0209676_10265261 350
141 3300025294 Ga0209025_1042766 Ga0209025_10427662 350
142 3300025295 Ga0209564_1000574 Ga0209564_100057431 350
143 3300025295 Ga0209564_1005575 Ga0209564_10055752 350
144 3300025298 Ga0209050_1002487 Ga0209050_100248710 350
145 3300025299 Ga0209256_1000556 Ga0209256_100055630 350
146 3300025299 Ga0209256_1003454 Ga0209256_10034545 350
147 3300025302 Ga0207426_1004947 Ga0207426_10049472 350
148 3300025303 Ga0209051_1000626 Ga0209051_100062630 350
149 3300025303 Ga0209051_1005413 Ga0209051_10054134 350
150 3300025915 Ga0207693_10005840 Ga0207693_100058404 350
151 3300025939 Ga0207665_10002248 Ga0207665_100022483 350
152 3300025941 Ga0207711_10272104 Ga0207711_102721042 350
153 3300025961 Ga0207712_10051062 Ga0207712_100510621 350
154 3300026067 Ga0207678_10194485 Ga0207678_101944852 350
155 3300026078 Ga0207702_10267485 Ga0207702_102674852 350
156 3300027111 Ga0209281_1000536 Ga0209281_100053620 350
157 3300027666 Ga0209282_1000123 Ga0209282_100012321 350
158 3300028794 Ga0307515_10026761 Ga0307515_100267614 350
159 3300031251 Ga0265327_10001037 Ga0265327_1000103743 350
160 3300031711 Ga0265314_10026627 Ga0265314_100266272 350
161 3300031967 Ga0315914_1003050 Ga0315914_100305011 350
162 3300032005 Ga0307411_10215718 Ga0307411_102157182 350
163 3300033430 Ga0315913_1000139 Ga0315913_100013920 350
164 3300033464 Ga0315915_1000275 Ga0315915_100027527 350
165 3300037471 Ga0395905_0057331 Ga0395905_0057331_1141_2238 350
166 3300038443 Ga0395901_0017963 Ga0395901_0017963_2349_3446 350
167 3300041491 Ga0451833_0566312 Ga0451833_0566312_1274_2359 350
168 3300041491 Ga0451833_0601082 Ga0451833_0601082_1648_2733 350
169 3300041492 Ga0451835_0201726 Ga0451835_0201726_2676_3761 350
170 3300041494 Ga0451837_0483681 Ga0451837_0483681_2341_3426 350
171 3300041498 Ga0451841_0446899 Ga0451841_0446899_984_2069 350
172 3300041503 Ga0451847_0352854 Ga0451847_0352854_1519_2604 350
173 3300041509 Ga0451843_1683256 Ga0451843_1683256_888_1973 350
174 3300041511 Ga0451855_1278474 Ga0451855_1278474_1851_2936 350
175 3300041512 Ga0451853_0173064 Ga0451853_0173064_2226_3311 350
176 3300041512 Ga0451853_0494502 Ga0451853_0494502_13764_14849 350
177 3300046501 Ga0495607_0120637 Ga0495607_0120637_108_1193 350
178 3300046506 Ga0495583_0002592 Ga0495583_0002592_9844_10929 350
179 3300046506 Ga0495583_0019544 Ga0495583_0019544_2287_3390 350
180 3300046507 Ga0495606_0007662 Ga0495606_0007662_8074_9159 350
181 3300046507 Ga0495606_0046197 Ga0495606_0046197_174_1274 350
182 3300046512 Ga0495610_0000605 Ga0495610_0000605_15946_17031 350
183 3300046513 Ga0495616_0033838 Ga0495616_0033838_240_1325 350
184 3300046515 Ga0495620_0013803 Ga0495620_0013803_1590_2675 350
185 3300046519 Ga0495632_0000749 Ga0495632_0000749_7058_8143 350
186 3300046522 Ga0495643_0003229 Ga0495643_0003229_1213_2298 350
187 3300046522 Ga0495643_0063953 Ga0495643_0063953_378_1472 350
188 3300046538 Ga0495609_0002449 Ga0495609_0002449_184_1287 350
189 3300046660 Ga0495625_0003309 Ga0495625_0003309_9870_10955 350
190 3300046665 Ga0495661_0110480 Ga0495661_0110480_300_1403 350
191 3300046674 Ga0495588_0041286 Ga0495588_0041286_723_1823 350
192 3300046689 Ga0495613_0001713 Ga0495613_0001713_9912_11006 350
193 3300047443 Ga0495687_001346 Ga0495687_001346_6100_7185 350
194 3300047472 Ga0495686_0001186 Ga0495686_0001186_9358_10443 350
195 3300047472 Ga0495686_0107918 Ga0495686_0107918_251_1336 350
196 3300048904 Ga0496101_0108484 Ga0496101_0108484_716_1813 350
197 3300048905 Ga0496102_0100873 Ga0496102_0100873_1154_2251 350
198 3300048906 Ga0496103_0056616 Ga0496103_0056616_932_2029 350
199 3300048908 Ga0496105_0005927 Ga0496105_0005927_259_1356 350
200 3300048909 Ga0496106_0150869 Ga0496106_0150869_68_1165 350
201 3300048911 Ga0496108_0049635 Ga0496108_0049635_804_1901 350
202 3300048913 Ga0496110_0233919 Ga0496110_0233919_223_1320 350
203 3300048914 Ga0496111_0198268 Ga0496111_0198268_50_1147 350
204 3300048916 Ga0496113_0126971 Ga0496113_0126971_692_1789 350
205 3300048917 Ga0496114_0026167 Ga0496114_0026167_1181_2278 350
206 3300048919 Ga0496116_0006262 Ga0496116_0006262_6073_7167 350
207 3300048922 Ga0496119_0082747 Ga0496119_0082747_701_1798 350
208 3300048923 Ga0496120_0039456 Ga0496120_0039456_795_1883 350
209 3300048924 Ga0496121_0009810 Ga0496121_0009810_5371_6459 350
210 3300048924 Ga0496121_0037740 Ga0496121_0037740_705_1802 350
211 3300048926 Ga0496123_0028281 Ga0496123_0028281_182_1279 350
212 3300048928 Ga0496125_0031592 Ga0496125_0031592_2877_3974 350
213 3300048928 Ga0496125_0093851 Ga0496125_0093851_51_1139 350
214 3300049744 Ga0501083_0098084 Ga0501083_0098084_101_1177 350
215 3300053136 Ga0500559_0002507 Ga0500559_0002507_818_1906 350
216 3300053177 Ga0500636_0005953 Ga0500636_0005953_2588_3661 350
217 3300060353 Ga0501082_0000104 Ga0501082_0000104_53598_54698 350
218 iso_pu_bacteria 2534681796 2535517577 350
219 3300002773 JGI25152J39213_1000711 JGI25152J39213_10007115 351
220 3300002987 JGI25159J45721_1000657 JGI25159J45721_100065714 351
221 3300003215 JGI25153J46596_10006606 JGI25153J46596_100066062 351
222 3300003374 JGI25161J50226_1000255 JGI25161J50226_100025517 351
223 3300003775 Ga0055524_1002260 Ga0055524_10022609 351
224 3300003792 Ga0055540_1002394 Ga0055540_10023944 351
225 3300004625 Ga0055543_1000031 Ga0055543_1000031102 351
226 3300005548 Ga0070665_100129749 Ga0070665_1001297491 351
227 3300025208 Ga0209436_100043 Ga0209436_10004347 351
228 3300025258 Ga0209129_1001255 Ga0209129_10012555 351
229 3300025273 Ga0209673_1000005 Ga0209673_100000578 351
230 3300025273 Ga0209673_1001863 Ga0209673_10018633 351
231 3300025284 Ga0209130_1000023 Ga0209130_1000023337 351
232 3300025295 Ga0209564_1000558 Ga0209564_100055822 351
233 3300025295 Ga0209564_1014640 Ga0209564_10146402 351
234 3300025297 Ga0209758_1000706 Ga0209758_100070624 351
235 3300025299 Ga0209256_1000688 Ga0209256_100068811 351
236 3300025299 Ga0209256_1004533 Ga0209256_10045333 351
237 3300025302 Ga0207426_1000087 Ga0207426_100008725 351
238 3300025303 Ga0209051_1003821 Ga0209051_10038218 351
239 3300025304 Ga0209257_1009120 Ga0209257_10091204 351
240 3300041413 Ga0439465_0013611 Ga0439465_0013611_1220_2290 351
241 3300046452 Ga0495617_042579 Ga0495617_042579_285_1349 351
242 3300046460 Ga0495638_0000084 Ga0495638_0000084_60034_61098 351
243 3300046474 Ga0495605_0009046 Ga0495605_0009046_1131_2195 351
244 3300046501 Ga0495607_0042535 Ga0495607_0042535_326_1390 351
245 3300046506 Ga0495583_0033120 Ga0495583_0033120_404_1468 351
246 3300046512 Ga0495610_0008403 Ga0495610_0008403_1255_2325 351
247 3300046513 Ga0495616_0051662 Ga0495616_0051662_246_1310 351
248 3300046518 Ga0495631_0023683 Ga0495631_0023683_371_1435 351
249 3300046522 Ga0495643_0085800 Ga0495643_0085800_120_1184 351
250 3300046616 Ga0495668_0054692 Ga0495668_0054692_1125_2189 351
251 3300046648 Ga0495611_0040810 Ga0495611_0040810_464_1528 351
252 3300046660 Ga0495625_0021153 Ga0495625_0021153_995_2059 351
253 3300046691 Ga0495670_0040843 Ga0495670_0040843_872_1936 351
254 3300046810 Ga0495660_0052612 Ga0495660_0052612_843_1907 351
255 3300047320 Ga0495672_0040342 Ga0495672_0040342_1326_2390 351
256 3300048091 Ga0495626_0036477 Ga0495626_0036477_350_1420 351
257 3300048909 Ga0496106_0000028 Ga0496106_0000028_5517_6587 351
258 3300048921 Ga0496118_0018625 Ga0496118_0018625_5116_6186 351
259 3300048924 Ga0496121_0098372 Ga0496121_0098372_343_1413 351
260 3300048925 Ga0496122_0053138 Ga0496122_0053138_1694_2764 351
261 3300048926 Ga0496123_0009948 Ga0496123_0009948_2052_3122 351
262 3300048927 Ga0496124_0038155 Ga0496124_0038155_89_1159 351
263 3300048928 Ga0496125_0002848 Ga0496125_0002848_5374_6444 351
264 3300049460 Ga0495682_0070633 Ga0495682_0070633_147_1211 351
265 3300049569 Ga0501032_0136545 Ga0501032_0136545_19_1092 351
266 3300049571 Ga0501034_0300743 Ga0501034_0300743_17_1072 351
267 3300049744 Ga0501083_0143437 Ga0501083_0143437_32_1105 351
268 3300053079 Ga0500610_0030362 Ga0500610_0030362_425_1489 351
269 3300053086 Ga0500578_0059840 Ga0500578_0059840_219_1283 351
270 3300053093 Ga0500651_0034828 Ga0500651_0034828_308_1378 351
271 3300053109 Ga0500569_024464 Ga0500569_024464_300_1364 351
272 3300053134 Ga0500658_0000790 Ga0500658_0000790_4286_5356 351
273 3300053139 Ga0500568_0002401 Ga0500568_0002401_4424_5494 351
274 3300053156 Ga0500622_0000206 Ga0500622_0000206_56999_58069 351
275 3300053160 Ga0500633_0005505 Ga0500633_0005505_1743_2813 351
276 3300060353 Ga0501082_0225657 Ga0501082_0225657_19_1092 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03060

NMO

Nitronate monooxygenase

46

390

0.93

PF01070

FMN_dh

FMN-dependent dehydrogenase

183

301

0.83

PF01180

DHO_dh

Dihydroorotate dehydrogenase

182

301

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lsm-assembly4.cif.gz_C crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1 0.9809 8 347
5lsm-assembly5.cif.gz_F crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1 0.9805 8 347
5lsm-assembly3.cif.gz_H-4 crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1 0.9804 8 345
5lsm-assembly5.cif.gz_D crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1 0.9755 6 347
5lsm-assembly4.cif.gz_B crystal structure of nitronate monooxygenase (so_0471) from shewanella oneidensis mr-1 0.9747 8 347
ID Description Score Start End Superfamily
5lsmB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9747 8 347 3.20.20.70
5lsmB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9689 8 347 3.20.20.70
af_Q2FZX9_3_354_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9451 7 347 3.20.20.70
4qisA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9362 8 347 3.20.20.70
af_Q2FZX9_3_354_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.919 7 347 3.20.20.70
ID Description Score Start End GO Terms
AF-Q2JYA8-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9895 4 347 GO:0009636
GO:0018580
GO:0051213
AF-A0A3M5W509-F1-model_v4 deleted 0.9879 71 346
AF-A0A258T450-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9859 232 346 GO:0009636
GO:0018580
AF-A0A1M5T2C5-F1-model_v4 Propionate 3-nitronate monooxygenase 0.9857 4 346 GO:0009636
GO:0018580
AF-A0A7G6V635-F1-model_v4 deleted 0.9835 203 347

Feature Viewer

pLDDT pTM Quality
93.4 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map