F381020

General Info

Members Datasets Scaffolds Average Seq Length
276 150 552 628

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10013098|Ga0075365_100130983
Length 721
Sequence MVKRPPTGTIPETPGSYQFKDAAGKVIYVGKASSLRQRLSNYFQDPRNLHARTAQMVATAETVEWIEVRNEVEALMLEWTLIKQHRPRFNIRLRDDKSYPFLAVTLDEEYPRALVMRGRKRKGVRYFGPYAHAYAIRDTLDLLLRSFPVRTCSNGKFNEHHRLGRPCLLFHIEKCSGPCVGEIDREAYLQQVGELCDFLDGDTDEIVKRLGNDMRAAAKELEFERAARLRDRLATVQKAIEKQQMVGERNEDIDVIGIAEDELEAAIQVFYVRKGRVVGRKGFIVDKVEDVTPGGLVDRIMEEMYGDEPALGIPKQVLVPVDAEDRATYEEWLTHMRGSRVQIRVPLRGDKRDLHETVTRNAKEEFTRHRLRRASDHNTRSRALVELQDTLGLPEAPLRIECYDMAHIQGTDYVGSMVVVEDGLPNKREYRRFKVKTVEGNDDYAAMEEVLTRRLTAYLAERDQPVNERGERPGKFAYPPQLLLVDGGKGQLAVAERVVKALGLEDEIPLASLAKRFEEVYLPGRSEPVNLARGGEALFMLQRIRDEAHRFANTFHRELRGKRMTKSSLDDIPGLGENRKTRIAKELGGVNAVKRASLDTLKSLTWLPDSVAEIIYAKFHPAGSGEVDLVVTDLANTEDDRGREHADDDAEGQVRVHVNPVRDRHLDADEHEDAAERVREIDELLLGVGEQEVHRSQAQDREGVRGQDDVRLVRDGEDRRD

Samples

Sample ID Description Type Environment
1 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
55 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
63 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
66 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
67 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
68 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
69 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
75 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
118 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
129 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
143 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
149 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
150 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.52
Nodule 0
Rhizoplane 7.25
Rhizosphere 82.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075365_10013098 3300006038 Bacteria 4946
2 JGI25407J50210_10002647 3300003373 Bacteria 4245
3 Ga0070671_100013273 3300005355 Bacteria 6639
4 Ga0070671_100043676 3300005355 Bacteria 3725
5 Ga0070713_100056734 3300005436 Bacteria 3258
6 Ga0070708_100002425 3300005445 Bacteria 14451
7 Ga0070681_10017670 3300005458 Bacteria 7128
8 Ga0070706_100010646 3300005467 Bacteria 8536
9 Ga0070706_100130036 3300005467 Bacteria 2349
10 Ga0070707_100029362 3300005468 Bacteria 5236
11 Ga0070707_100033312 3300005468 Bacteria 4912
12 Ga0070707_100130171 3300005468 Bacteria 2447
13 Ga0070697_100032048 3300005536 Bacteria 4227
14 Ga0070695_100022743 3300005545 Bacteria 3848
15 Ga0070704_100081085 3300005549 Bacteria 2389
16 Ga0068859_100061964 3300005617 Bacteria 3769
17 Ga0068858_100017171 3300005842 Bacteria 6792
18 Ga0068860_100032047 3300005843 Bacteria 5054
19 Ga0081455_10002578 3300005937 Bacteria 21489
20 Ga0081455_10011613 3300005937 Bacteria 8837
21 Ga0081455_10041421 3300005937 Bacteria 4050
22 Ga0081455_10110366 3300005937 Bacteria 2187
23 Ga0081538_10000003 3300005981 Bacteria 211728
24 Ga0081538_10007093 3300005981 Bacteria 9737
25 Ga0081538_10010109 3300005981 Bacteria 7764
26 Ga0075365_10002093 3300006038 Bacteria 9544
27 Ga0075363_100004646 3300006048 Bacteria 6037
28 Ga0075364_10014113 3300006051 Bacteria 4929
29 Ga0075367_10045302 3300006178 Bacteria 2581
30 Ga0075428_100000027 3300006844 Bacteria 123143
31 Ga0075428_100000250 3300006844 Bacteria 52704
32 Ga0075428_100029080 3300006844 Bacteria 6115
33 Ga0075430_100000181 3300006846 Bacteria 42043
34 Ga0075430_100004034 3300006846 Bacteria 12387
35 Ga0075430_100068146 3300006846 Bacteria 2986
36 Ga0075431_100020059 3300006847 Bacteria 6826
37 Ga0075431_100141108 3300006847 Bacteria 2483
38 Ga0075433_10001932 3300006852 Bacteria 15583
39 Ga0075434_100010049 3300006871 Bacteria 8861
40 Ga0075429_100000110 3300006880 Bacteria 46855
41 Ga0075429_100023119 3300006880 Bacteria 5390
42 Ga0075429_100030736 3300006880 Bacteria 4665
43 Ga0075429_100066741 3300006880 Bacteria 3132
44 Ga0075436_100012284 3300006914 Bacteria 5867
45 Ga0097620_100061966 3300006931 Bacteria 3769
46 Ga0075435_100008838 3300007076 Bacteria 7258
47 Ga0111539_10011427 3300009094 Bacteria 11144
48 Ga0111539_10107248 3300009094 Bacteria 3277
49 Ga0105245_10017524 3300009098 Bacteria 6250
50 Ga0105245_10022722 3300009098 Bacteria 5504
51 Ga0105245_10109339 3300009098 Bacteria 2569
52 Ga0114129_10000179 3300009147 Bacteria 70108
53 Ga0114129_10013526 3300009147 Bacteria 11629
54 Ga0114129_10043101 3300009147 Bacteria 6351
55 Ga0114129_10068428 3300009147 Bacteria 4951
56 Ga0114129_10102677 3300009147 Bacteria 3954
57 Ga0105248_10207240 3300009177 Bacteria 2209
58 Ga0105249_10024809 3300009553 Bacteria 5392
59 Ga0207684_10019350 3300025910 Bacteria 5826
60 Ga0207707_10017330 3300025912 Bacteria 6280
61 Ga0207646_10026388 3300025922 Bacteria 5302
62 Ga0207646_10040131 3300025922 Bacteria 4210
63 Ga0207687_10011285 3300025927 Bacteria 5839
64 Ga0207687_10016831 3300025927 Bacteria 4806
65 Ga0207687_10049153 3300025927 Bacteria 2932
66 Ga0207644_10011862 3300025931 Bacteria 5775
67 Ga0207712_10038640 3300025961 Bacteria 3265
68 Ga0207675_100018297 3300026118 Bacteria 6533
69 Ga0268264_10023097 3300028381 Bacteria 5074
70 Ga0265338_10004017 3300028800 Bacteria 20193
71 Ga0265325_10005415 3300031241 Bacteria 7877
72 Ga0265327_10000171 3300031251 Bacteria 139992
73 Ga0265327_10009334 3300031251 Bacteria 7096
74 Ga0265313_10002949 3300031595 Bacteria 14200
75 Ga0316576_10028220 3300031727 Bacteria 3954
76 Ga0316576_10105535 3300031727 Bacteria 2109
77 Ga0316578_10007981 3300031728 Bacteria 5352
78 Ga0307410_10010340 3300031852 Bacteria 5280
79 Ga0307410_10040910 3300031852 Bacteria 3053
80 Ga0307406_10043361 3300031901 Bacteria 2813
81 Ga0307406_10066955 3300031901 Bacteria 2340
82 Ga0307407_10034262 3300031903 Bacteria 2778
83 Ga0307407_10054780 3300031903 Bacteria 2302
84 Ga0307409_100020199 3300031995 Bacteria 4534
85 Ga0307411_10037915 3300032005 Bacteria 3035
86 Ga0307415_100007437 3300032126 Bacteria 5990
87 Ga0307415_100023293 3300032126 Bacteria 3841
88 Ga0316580_10015446 3300032139 Bacteria 2336
89 Ga0373929_0001000 3300035085 Bacteria 5481
90 Ga0316574_0006809 3300035398 Bacteria 6210
91 Ga0316574_0009531 3300035398 Bacteria 5442
92 Ga0316574_0030674 3300035398 Bacteria 3258
93 Ga0316574_0032888 3300035398 Bacteria 3155
94 Ga0316574_0033954 3300035398 Bacteria 3108
95 Ga0373931_0000005 3300035691 Bacteria 480485
96 Ga0373927_0062571 3300035695 Bacteria 2406
97 Ga0373933_0063297 3300035724 Bacteria 2236
98 Ga0316584_0012548 3300036712 Bacteria 5978
99 Ga0316584_0042248 3300036712 Bacteria 3400
100 Ga0395901_0156405 3300038443 Bacteria 2394
101 Ga0395901_0224126 3300038443 Bacteria 1964
102 Ga0400485_12459 3300038735 Bacteria 5040
103 Ga0400483_034849 3300039062 Bacteria 80050
104 Ga0400483_173767 3300039062 Bacteria 7927
105 Ga0400483_238368 3300039062 Bacteria 4359
106 Ga0400483_262272 3300039062 Bacteria 3057
107 Ga0400483_284550 3300039062 Bacteria 21395
108 Ga0436365_1785051 3300039437 Bacteria 2675
109 Ga0436362_0054847 3300039453 Bacteria 5963
110 Ga0439450_000905 3300042008 Bacteria 4101
111 Ga0439454_000732 3300042011 Bacteria 2801
112 Ga0439464_0008297 3300042439 Bacteria 2722
113 Ga0439460_0004298 3300042461 Bacteria 3471
114 Ga0451577_0003411 3300042876 Bacteria 17723
115 Ga0439440_0002509 3300042993 Bacteria 3473
116 Ga0466966_0039535 3300044684 Bacteria 3038
117 Ga0495651_0015638 3300046462 Bacteria 5874
118 Ga0495608_0036160 3300046511 Bacteria 3326
119 Ga0495618_0026882 3300046514 Bacteria 3580
120 Ga0495630_0037428 3300046517 Bacteria 3628
121 Ga0495630_0047729 3300046517 Bacteria 3203
122 Ga0495630_0082964 3300046517 Bacteria 2420
123 Ga0495640_0033344 3300046533 Bacteria 3659
124 Ga0495586_0052785 3300046535 Bacteria 2201
125 Ga0495645_0111339 3300046543 Bacteria 1937
126 Ga0495667_0012923 3300046559 Bacteria 5659
127 Ga0495613_0076681 3300046689 Bacteria 2432
128 Ga0495674_0101612 3300047319 Bacteria 2446
129 Ga0495680_0083024 3300047322 Bacteria 2417
130 Ga0495684_0087953 3300047471 Bacteria 2355
131 Ga0496101_0034383 3300048904 Bacteria 3579
132 Ga0496102_0018358 3300048905 Bacteria 6145
133 Ga0496103_0034546 3300048906 Bacteria 3093
134 Ga0496104_0083802 3300048907 Bacteria 3041
135 Ga0496105_0019132 3300048908 Bacteria 5520
136 Ga0496106_0054543 3300048909 Bacteria 3020
137 Ga0496108_0012553 3300048911 Bacteria 6900
138 Ga0496108_0080816 3300048911 Bacteria 2754
139 Ga0496109_0006089 3300048912 Bacteria 10134
140 Ga0496110_0067654 3300048913 Bacteria 3161
141 Ga0496111_0004260 3300048914 Bacteria 9015
142 Ga0496111_0060179 3300048914 Bacteria 2753
143 Ga0496112_0007227 3300048915 Bacteria 9842
144 Ga0496112_0009603 3300048915 Bacteria 8726
145 Ga0496113_0040342 3300048916 Bacteria 3440
146 Ga0496114_0016543 3300048917 Bacteria 5945
147 Ga0496114_0018903 3300048917 Bacteria 5581
148 Ga0496114_0019035 3300048917 Bacteria 5563
149 Ga0496114_0086147 3300048917 Bacteria 2662
150 Ga0496115_0022518 3300048918 Bacteria 4883
151 Ga0501031_0014382 3300049568 Bacteria 5145
152 Ga0501031_0037178 3300049568 Bacteria 3176
153 Ga0501031_0076816 3300049568 Bacteria 2175
154 Ga0501033_0000323 3300049570 Bacteria 45464
155 Ga0501033_0003116 3300049570 Bacteria 13771
156 Ga0501034_0000900 3300049571 Bacteria 43318
157 Ga0501034_0001621 3300049571 Bacteria 29197
158 Ga0501034_0002965 3300049571 Bacteria 19668
159 Ga0501034_0056104 3300049571 Bacteria 3965
160 Ga0501036_0007595 3300049572 Bacteria 8848
161 Ga0501036_0072185 3300049572 Bacteria 2918
162 Ga0501037_0110252 3300049573 Bacteria 1983
163 Ga0501038_0047399 3300049574 Bacteria 3722
164 Ga0501039_0011769 3300049575 Bacteria 6663
165 Ga0501039_0014264 3300049575 Bacteria 6084
166 Ga0501039_0025904 3300049575 Bacteria 4509
167 Ga0501040_0003348 3300049576 Bacteria 10359
168 Ga0501040_0036902 3300049576 Bacteria 3318
169 Ga0501040_0084306 3300049576 Bacteria 2204
170 Ga0501041_0003599 3300049577 Bacteria 8911
171 Ga0501041_0004466 3300049577 Bacteria 8101
172 Ga0501041_0011669 3300049577 Bacteria 5199
173 Ga0501042_0005311 3300049578 Bacteria 8281
174 Ga0501043_0029256 3300049579 Bacteria 4327
175 Ga0501046_0011624 3300049580 Bacteria 7525
176 Ga0501046_0011812 3300049580 Bacteria 7455
177 Ga0501048_0041950 3300049582 Bacteria 3278
178 Ga0501048_0045721 3300049582 Bacteria 3126
179 Ga0501068_0001147 3300049584 Bacteria 14033
180 Ga0501068_0002320 3300049584 Bacteria 10146
181 Ga0501068_0038688 3300049584 Bacteria 2858
182 Ga0501069_0000030 3300049585 Bacteria 102077
183 Ga0501069_0001646 3300049585 Bacteria 11097
184 Ga0501070_0000135 3300049586 Bacteria 66258
185 Ga0501070_0001018 3300049586 Bacteria 25182
186 Ga0501070_0011986 3300049586 Bacteria 7316
187 Ga0501070_0030387 3300049586 Bacteria 4526
188 Ga0501071_0003430 3300049587 Bacteria 9902
189 Ga0501071_0007750 3300049587 Bacteria 7081
190 Ga0501071_0013425 3300049587 Bacteria 5581
191 Ga0501071_0077095 3300049587 Bacteria 2434
192 Ga0501072_0000501 3300049588 Bacteria 28164
193 Ga0501072_0001539 3300049588 Bacteria 17242
194 Ga0501072_0002981 3300049588 Bacteria 12753
195 Ga0501073_0000423 3300049589 Bacteria 28924
196 Ga0501073_0028671 3300049589 Bacteria 3978
197 Ga0501073_0028681 3300049589 Bacteria 3977
198 Ga0501073_0093122 3300049589 Bacteria 2094
199 Ga0501074_0000328 3300049590 Bacteria 27544
200 Ga0501074_0042780 3300049590 Bacteria 3277
201 Ga0501074_0053335 3300049590 Bacteria 2917
202 Ga0501074_0096161 3300049590 Bacteria 2121
203 Ga0501075_0000413 3300049591 Bacteria 24963
204 Ga0501075_0012398 3300049591 Bacteria 6059
205 Ga0501075_0032190 3300049591 Bacteria 3895
206 Ga0501076_0079498 3300049592 Bacteria 2631
207 Ga0501077_0002455 3300049593 Bacteria 11104
208 Ga0501077_0003585 3300049593 Bacteria 9329
209 Ga0501077_0044050 3300049593 Bacteria 2835
210 Ga0501077_0100890 3300049593 Bacteria 1829
211 Ga0501079_0007437 3300049741 Bacteria 8288
212 Ga0501079_0016942 3300049741 Bacteria 5567
213 Ga0501079_0054388 3300049741 Bacteria 3087
214 Ga0501080_0001228 3300049742 Bacteria 21301
215 Ga0501080_0004204 3300049742 Bacteria 12774
216 Ga0501080_0139711 3300049742 Bacteria 2240
217 Ga0501081_0009339 3300049743 Bacteria 6389
218 Ga0501081_0054043 3300049743 Bacteria 2774
219 Ga0501083_0011346 3300049744 Bacteria 6250
220 Ga0501083_0042672 3300049744 Bacteria 3074
221 Ga0501044_0007424 3300049823 Bacteria 12059
222 Ga0501045_0001845 3300049824 Bacteria 14318
223 Ga0501045_0014545 3300049824 Bacteria 5579
224 Ga0501045_0036860 3300049824 Bacteria 3552
225 nmdc:mga00v17_11245_c1 3300050491 Bacteria 4916
226 nmdc:mga00v17_3716_c1 3300050491 Bacteria 7386
227 nmdc:mga0yw44_11829_c1 3300050492 Bacteria 4525
228 nmdc:mga0yw44_27203_c1 3300050492 Bacteria 3274
229 nmdc:mga0yw44_37004_c1 3300050492 Bacteria 2879
230 nmdc:mga0yw44_38795_c1 3300050492 Bacteria 2821
231 nmdc:mga0yw44_41283_c1 3300050492 Bacteria 2746
232 nmdc:mga05p37_17547_c1 3300050507 Bacteria 8641
233 nmdc:mga05p37_337_c1 3300050507 Bacteria 50255
234 nmdc:mga05p37_93572_c1 3300050507 Bacteria 3703
235 nmdc:mga09592_134873_c1 3300050508 Bacteria 2126
236 nmdc:mga09592_31954_c1 3300050508 Bacteria 4387
237 nmdc:mga09592_323_c1 3300050508 Bacteria 34887
238 nmdc:mga09592_3682_c1 3300050508 Bacteria 7167
239 nmdc:mga09592_61230_c1 3300050508 Bacteria 3183
240 nmdc:mga0qj67_633_c1 3300050509 Bacteria 24172
241 nmdc:mga06r32_2518_c1 3300050510 Bacteria 16397
242 nmdc:mga06r32_4600_c1 3300050510 Bacteria 12370
243 nmdc:mga06r32_8725_c1 3300050510 Bacteria 9136
244 nmdc:mga08y16_112379_c1 3300050511 Bacteria 2836
245 nmdc:mga08y16_4708_c1 3300050511 Bacteria 14225
246 nmdc:mga0n895_40083_c1 3300050512 Bacteria 4548
247 nmdc:mga0n895_57662_c1 3300050512 Bacteria 3829
248 nmdc:mga0rr50_5872_c1 3300050513 Bacteria 7384
249 nmdc:mga0rr50_73711_c1 3300050513 Bacteria 2611
250 nmdc:mga08x19_12509_c1 3300050514 Bacteria 5115
251 nmdc:mga0a205_23327_c1 3300050515 Bacteria 5869
252 Ga0495601_0087163 3300053077 Bacteria 2007
253 Ga0495595_0007074 3300053084 Bacteria 4585
254 Ga0495619_0019170 3300053085 Bacteria 4347
255 Ga0500566_0000970 3300053094 Bacteria 16532
256 Ga0500641_0003937 3300053096 Bacteria 5248
257 Ga0500568_0009718 3300053139 Bacteria 4553
258 Ga0500616_0000398 3300053153 Bacteria 59666
259 Ga0500616_0000826 3300053153 Bacteria 35059
260 Ga0500616_0023139 3300053153 Bacteria 3463
261 Ga0501084_0000468 3300054114 Bacteria 31212
262 Ga0501084_0000803 3300054114 Bacteria 24054
263 Ga0501084_0000862 3300054114 Bacteria 23409
264 Ga0501084_0002158 3300054114 Bacteria 15749
265 Ga0501084_0021410 3300054114 Bacteria 5387
266 Ga0501084_0102450 3300054114 Bacteria 2404
267 Ga0501082_0000962 3300060353 Bacteria 25427
268 Ga0501082_0006094 3300060353 Bacteria 10466
269 Ga0530510_0001817 3300061734 Bacteria 14557
270 Ga0530510_0002174 3300061734 Bacteria 13441
271 Ga0530510_0005381 3300061734 Bacteria 8858
272 Ga0530510_0015808 3300061734 Bacteria 5336
273 Ga0530510_0026887 3300061734 Bacteria 4121
274 Ga0530510_0094032 3300061734 Bacteria 2189
275 2837187454 2837183177 Bacteria 4637169
276 2857711477 2857710386 Bacteria 3186771
277 Ga0075365_10013098
278 JGI25407J50210_10002647
279 Ga0070671_100013273
280 Ga0070671_100043676
281 Ga0070713_100056734
282 Ga0070708_100002425
283 Ga0070681_10017670
284 Ga0070706_100010646
285 Ga0070706_100130036
286 Ga0070707_100029362
287 Ga0070707_100033312
288 Ga0070707_100130171
289 Ga0070697_100032048
290 Ga0070695_100022743
291 Ga0070704_100081085
292 Ga0068859_100061964
293 Ga0068858_100017171
294 Ga0068860_100032047
295 Ga0081455_10002578
296 Ga0081455_10011613
297 Ga0081455_10041421
298 Ga0081455_10110366
299 Ga0081538_10000003
300 Ga0081538_10007093
301 Ga0081538_10010109
302 Ga0075365_10002093
303 Ga0075363_100004646
304 Ga0075364_10014113
305 Ga0075367_10045302
306 Ga0075428_100000027
307 Ga0075428_100000250
308 Ga0075428_100029080
309 Ga0075430_100000181
310 Ga0075430_100004034
311 Ga0075430_100068146
312 Ga0075431_100020059
313 Ga0075431_100141108
314 Ga0075433_10001932
315 Ga0075434_100010049
316 Ga0075429_100000110
317 Ga0075429_100023119
318 Ga0075429_100030736
319 Ga0075429_100066741
320 Ga0075436_100012284
321 Ga0097620_100061966
322 Ga0075435_100008838
323 Ga0111539_10011427
324 Ga0111539_10107248
325 Ga0105245_10017524
326 Ga0105245_10022722
327 Ga0105245_10109339
328 Ga0114129_10000179
329 Ga0114129_10013526
330 Ga0114129_10043101
331 Ga0114129_10068428
332 Ga0114129_10102677
333 Ga0105248_10207240
334 Ga0105249_10024809
335 Ga0207684_10019350
336 Ga0207707_10017330
337 Ga0207646_10026388
338 Ga0207646_10040131
339 Ga0207687_10011285
340 Ga0207687_10016831
341 Ga0207687_10049153
342 Ga0207644_10011862
343 Ga0207712_10038640
344 Ga0207675_100018297
345 Ga0268264_10023097
346 Ga0265338_10004017
347 Ga0265325_10005415
348 Ga0265327_10000171
349 Ga0265327_10009334
350 Ga0265313_10002949
351 Ga0316576_10028220
352 Ga0316576_10105535
353 Ga0316578_10007981
354 Ga0307410_10010340
355 Ga0307410_10040910
356 Ga0307406_10043361
357 Ga0307406_10066955
358 Ga0307407_10034262
359 Ga0307407_10054780
360 Ga0307409_100020199
361 Ga0307411_10037915
362 Ga0307415_100007437
363 Ga0307415_100023293
364 Ga0316580_10015446
365 Ga0373929_0001000
366 Ga0316574_0006809
367 Ga0316574_0009531
368 Ga0316574_0030674
369 Ga0316574_0032888
370 Ga0316574_0033954
371 Ga0373931_0000005
372 Ga0373927_0062571
373 Ga0373933_0063297
374 Ga0316584_0012548
375 Ga0316584_0042248
376 Ga0395901_0156405
377 Ga0395901_0224126
378 Ga0400485_12459
379 Ga0400483_034849
380 Ga0400483_173767
381 Ga0400483_238368
382 Ga0400483_262272
383 Ga0400483_284550
384 Ga0436365_1785051
385 Ga0436362_0054847
386 Ga0439450_000905
387 Ga0439454_000732
388 Ga0439464_0008297
389 Ga0439460_0004298
390 Ga0451577_0003411
391 Ga0439440_0002509
392 Ga0466966_0039535
393 Ga0495651_0015638
394 Ga0495608_0036160
395 Ga0495618_0026882
396 Ga0495630_0037428
397 Ga0495630_0047729
398 Ga0495630_0082964
399 Ga0495640_0033344
400 Ga0495586_0052785
401 Ga0495645_0111339
402 Ga0495667_0012923
403 Ga0495613_0076681
404 Ga0495674_0101612
405 Ga0495680_0083024
406 Ga0495684_0087953
407 Ga0496101_0034383
408 Ga0496102_0018358
409 Ga0496103_0034546
410 Ga0496104_0083802
411 Ga0496105_0019132
412 Ga0496106_0054543
413 Ga0496108_0012553
414 Ga0496108_0080816
415 Ga0496109_0006089
416 Ga0496110_0067654
417 Ga0496111_0004260
418 Ga0496111_0060179
419 Ga0496112_0007227
420 Ga0496112_0009603
421 Ga0496113_0040342
422 Ga0496114_0016543
423 Ga0496114_0018903
424 Ga0496114_0019035
425 Ga0496114_0086147
426 Ga0496115_0022518
427 Ga0501031_0014382
428 Ga0501031_0037178
429 Ga0501031_0076816
430 Ga0501033_0000323
431 Ga0501033_0003116
432 Ga0501034_0000900
433 Ga0501034_0001621
434 Ga0501034_0002965
435 Ga0501034_0056104
436 Ga0501036_0007595
437 Ga0501036_0072185
438 Ga0501037_0110252
439 Ga0501038_0047399
440 Ga0501039_0011769
441 Ga0501039_0014264
442 Ga0501039_0025904
443 Ga0501040_0003348
444 Ga0501040_0036902
445 Ga0501040_0084306
446 Ga0501041_0003599
447 Ga0501041_0004466
448 Ga0501041_0011669
449 Ga0501042_0005311
450 Ga0501043_0029256
451 Ga0501046_0011624
452 Ga0501046_0011812
453 Ga0501048_0041950
454 Ga0501048_0045721
455 Ga0501068_0001147
456 Ga0501068_0002320
457 Ga0501068_0038688
458 Ga0501069_0000030
459 Ga0501069_0001646
460 Ga0501070_0000135
461 Ga0501070_0001018
462 Ga0501070_0011986
463 Ga0501070_0030387
464 Ga0501071_0003430
465 Ga0501071_0007750
466 Ga0501071_0013425
467 Ga0501071_0077095
468 Ga0501072_0000501
469 Ga0501072_0001539
470 Ga0501072_0002981
471 Ga0501073_0000423
472 Ga0501073_0028671
473 Ga0501073_0028681
474 Ga0501073_0093122
475 Ga0501074_0000328
476 Ga0501074_0042780
477 Ga0501074_0053335
478 Ga0501074_0096161
479 Ga0501075_0000413
480 Ga0501075_0012398
481 Ga0501075_0032190
482 Ga0501076_0079498
483 Ga0501077_0002455
484 Ga0501077_0003585
485 Ga0501077_0044050
486 Ga0501077_0100890
487 Ga0501079_0007437
488 Ga0501079_0016942
489 Ga0501079_0054388
490 Ga0501080_0001228
491 Ga0501080_0004204
492 Ga0501080_0139711
493 Ga0501081_0009339
494 Ga0501081_0054043
495 Ga0501083_0011346
496 Ga0501083_0042672
497 Ga0501044_0007424
498 Ga0501045_0001845
499 Ga0501045_0014545
500 Ga0501045_0036860
501 nmdc:mga00v17_11245_c1
502 nmdc:mga00v17_3716_c1
503 nmdc:mga0yw44_11829_c1
504 nmdc:mga0yw44_27203_c1
505 nmdc:mga0yw44_37004_c1
506 nmdc:mga0yw44_38795_c1
507 nmdc:mga0yw44_41283_c1
508 nmdc:mga05p37_17547_c1
509 nmdc:mga05p37_337_c1
510 nmdc:mga05p37_93572_c1
511 nmdc:mga09592_134873_c1
512 nmdc:mga09592_31954_c1
513 nmdc:mga09592_323_c1
514 nmdc:mga09592_3682_c1
515 nmdc:mga09592_61230_c1
516 nmdc:mga0qj67_633_c1
517 nmdc:mga06r32_2518_c1
518 nmdc:mga06r32_4600_c1
519 nmdc:mga06r32_8725_c1
520 nmdc:mga08y16_112379_c1
521 nmdc:mga08y16_4708_c1
522 nmdc:mga0n895_40083_c1
523 nmdc:mga0n895_57662_c1
524 nmdc:mga0rr50_5872_c1
525 nmdc:mga0rr50_73711_c1
526 nmdc:mga08x19_12509_c1
527 nmdc:mga0a205_23327_c1
528 Ga0495601_0087163
529 Ga0495595_0007074
530 Ga0495619_0019170
531 Ga0500566_0000970
532 Ga0500641_0003937
533 Ga0500568_0009718
534 Ga0500616_0000398
535 Ga0500616_0000826
536 Ga0500616_0023139
537 Ga0501084_0000468
538 Ga0501084_0000803
539 Ga0501084_0000862
540 Ga0501084_0002158
541 Ga0501084_0021410
542 Ga0501084_0102450
543 Ga0501082_0000962
544 Ga0501082_0006094
545 Ga0530510_0001817
546 Ga0530510_0002174
547 Ga0530510_0005381
548 Ga0530510_0015808
549 Ga0530510_0026887
550 Ga0530510_0094032
551 2837187454
552 2857711477

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08459

UvrC_RNaseH_dom

UvrC RNAse H endonuclease domain

388

553

0.98

PF22920

UvrC_RNaseH

UvrC Ribonuclease H-like domain

252

369

0.98

PF02151

UVR

UvrB/uvrC motif

204

239

0.91

PF01541

GIY-YIG

GIY-YIG catalytic domain

13

91

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yd1-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima bound to its catalytic divalent cation: magnesium 0.9569 14 94
1yd4-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant y29f bound to its catalytic divalent cation 0.9558 14 94
1yd5-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant n88a bound to its catalytic divalent cation 0.9455 14 93
1yd3-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant y43f bound to its catalytic divalent cation 0.9452 14 96
1yd2-assembly1.cif.gz_A crystal structure of the giy-yig n-terminal endonuclease domain of uvrc from thermotoga maritima: point mutant y19f bound to the catalytic divalent cation 0.944 14 96
ID Description Score Start End Superfamily
af_P9WFC5_104_206_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9696 104 205 3.40.1440.10
af_Q2FZD0_4_102_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.954 11 103 3.40.1440.10
af_P9WFC5_104_206_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9514 104 205 3.40.1440.10
1yd2A00 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.944 14 96 3.40.1440.10
af_P9WFC5_7_103_3.40.1440.10 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;GIY-YIG endonuclease 0.9423 7 103 3.40.1440.10
ID Description Score Start End GO Terms
AF-A0A836WPR9-F1-model_v4 Excinuclease ABC subunit C 0.9637 387 567 GO:0006974
GO:0009380
GO:0009381
AF-A0A836WPR9-F1-model_v4 Excinuclease ABC subunit C 0.9525 387 567 GO:0006974
GO:0009380
GO:0009381
AF-A0A2W6B192-F1-model_v4 Excinuclease ABC subunit C 0.9502 11 91 GO:0006289
GO:0009380
AF-A0A7Y3MJX8-F1-model_v4 GIY-YIG nuclease family protein 0.9338 11 93 GO:0006289
GO:0009380
AF-A0A3D4H525-F1-model_v4 Excinuclease ABC subunit C 0.9321 387 525 GO:0006974
GO:0009380
GO:0009381

Map