F380866

General Info

Members Datasets Scaffolds Average Seq Length
276 166 552 323

Family's Representative Sequence

Representative Sequence 3300005293|Ga0065715_10093311|Ga0065715_100933112
Length 366
Sequence LFVGYPACHSERGEESRIISLQPRHDNKQRCFASLNMTRKDTAQNWNCSRHGCPYSEPMILEPVRPIQLSEIQEARKRIAHTIVRTPLIRLELGPDFPDIRLKLENLQPINAYKLRGAANAVALLSNSERERGVWTISAGNAGQGVAYAARQAGVPCAVVVIETAPKSKLERMRALGAKLIPVSYDVAWQTLEERSFPGADGTFIHPFDDDNFIAGHGTMGLEILEDAPDMTAVIGSIGGGGLITGVASAIKAVKSDVKIFGVEPETAAPAALSFKMGSPQVFKDWKASFVDGAGGQSMFPRMWERMKPVVDDYFVVSLEETRRAMRLMAEKARVISEGAGALPLAAALSGGGNIDLNKFCELTAN

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
75 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
114 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
141 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.99
Rhizosphere 95.29
Stem 0
Stem Tuber 0
Unclassified 21.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10093311 3300005293 Bacteria 4716
2 JGI25405J52794_10001213 3300003911 Bacteria 4172
3 Ga0065715_10009372 3300005293 Bacteria 4356
4 Ga0065715_10103569 3300005293 Bacteria 3024
5 Ga0065715_10124068 3300005293 Bacteria 2163
6 Ga0070683_100020623 3300005329 Bacteria 5866
7 Ga0070683_100034751 3300005329 Bacteria 4606
8 Ga0070683_100095116 3300005329 Bacteria 2801
9 Ga0070670_100009897 3300005331 Bacteria 8140
10 Ga0070666_10268849 3300005335 Bacteria 1210
11 Ga0070689_100005816 3300005340 Bacteria 8463
12 Ga0070661_100012159 3300005344 Bacteria 6019
13 Ga0070675_100002406 3300005354 Bacteria 13964
14 Ga0070675_100064491 3300005354 Unclassified 3029
15 Ga0070671_100026415 3300005355 Bacteria 4771
16 Ga0070671_100064461 3300005355 Bacteria 3051
17 Ga0070671_100077885 3300005355 Bacteria 2770
18 Ga0070688_100072332 3300005365 Bacteria 2209
19 Ga0070659_100003285 3300005366 Bacteria 11508
20 Ga0070659_100176967 3300005366 Unclassified 1749
21 Ga0070703_10037151 3300005406 Unclassified 1500
22 Ga0070713_100138454 3300005436 Unclassified 2153
23 Ga0070701_10080095 3300005438 Unclassified 1766
24 Ga0070705_100000217 3300005440 Bacteria 34074
25 Ga0070705_100027825 3300005440 Bacteria 3090
26 Ga0070705_100215270 3300005440 Bacteria 1327
27 Ga0070694_100111788 3300005444 Bacteria 1947
28 Ga0070708_100026406 3300005445 Bacteria 4971
29 Ga0070708_100070343 3300005445 Bacteria 3148
30 Ga0070708_100133816 3300005445 Bacteria 2295
31 Ga0070708_100268288 3300005445 Unclassified 1605
32 Ga0070708_100309773 3300005445 Bacteria 1487
33 Ga0070708_100386478 3300005445 Unclassified 1320
34 Ga0070663_100011029 3300005455 Bacteria 5656
35 Ga0070685_10024327 3300005466 Unclassified 3325
36 Ga0070706_100004605 3300005467 Bacteria 13235
37 Ga0070706_100024443 3300005467 Bacteria 5562
38 Ga0070706_100185271 3300005467 Bacteria 1945
39 Ga0070707_100020780 3300005468 Bacteria 6197
40 Ga0070707_100026054 3300005468 Bacteria 5549
41 Ga0070707_100031549 3300005468 Bacteria 5048
42 Ga0070707_100112101 3300005468 Bacteria 2646
43 Ga0070707_100160580 3300005468 Viruses 2190
44 Ga0070707_100163163 3300005468 Unclassified 2171
45 Ga0070707_100173588 3300005468 Bacteria 2101
46 Ga0070707_100193236 3300005468 Bacteria 1985
47 Ga0070707_100507704 3300005468 Bacteria 1167
48 Ga0070698_100006769 3300005471 Bacteria 12424
49 Ga0070698_100046196 3300005471 Bacteria 4453
50 Ga0070698_100051791 3300005471 Bacteria 4180
51 Ga0070698_100097586 3300005471 Unclassified 2914
52 Ga0070698_100132213 3300005471 Bacteria 2450
53 Ga0070698_100179360 3300005471 Unclassified 2056
54 Ga0070698_100227232 3300005471 Bacteria 1800
55 Ga0070699_100000005 3300005518 Bacteria 384287
56 Ga0070699_100000018 3300005518 Bacteria 190128
57 Ga0070699_100016863 3300005518 Bacteria 6271
58 Ga0070699_100028181 3300005518 Bacteria 4843
59 Ga0070699_100041625 3300005518 Unclassified 3976
60 Ga0070699_100100299 3300005518 Bacteria 2538
61 Ga0070699_100167564 3300005518 Unclassified 1946
62 Ga0070699_100170443 3300005518 Bacteria 1929
63 Ga0070684_100001239 3300005535 Bacteria 18328
64 Ga0070684_100043721 3300005535 Bacteria 3870
65 Ga0070697_100009582 3300005536 Bacteria 7564
66 Ga0070697_100086514 3300005536 Unclassified 2587
67 Ga0070686_100053385 3300005544 Bacteria 2580
68 Ga0070695_100062391 3300005545 Unclassified 2420
69 Ga0070695_100116466 3300005545 Unclassified 1822
70 Ga0070695_100227792 3300005545 Unclassified 1346
71 Ga0070696_100000268 3300005546 Bacteria 31326
72 Ga0070665_100054303 3300005548 Bacteria 4018
73 Ga0070665_100362059 3300005548 Bacteria 1456
74 Ga0070704_100018794 3300005549 Bacteria 4428
75 Ga0068852_100131494 3300005616 Bacteria 2305
76 Ga0068861_100204701 3300005719 Unclassified 1659
77 Ga0068863_100488271 3300005841 Unclassified 1212
78 Ga0068860_100096009 3300005843 Bacteria 2826
79 Ga0081455_10001439 3300005937 Bacteria 29437
80 Ga0081455_10001581 3300005937 Bacteria 27874
81 Ga0081455_10017516 3300005937 Bacteria 6864
82 Ga0081455_10019468 3300005937 Bacteria 6421
83 Ga0081455_10036241 3300005937 Bacteria 4396
84 Ga0081540_1000215 3300005983 Bacteria 61058
85 Ga0081539_10001684 3300005985 Bacteria 35711
86 Ga0081539_10009153 3300005985 Bacteria 8362
87 Ga0081539_10039313 3300005985 Bacteria 2793
88 Ga0070717_10014107 3300006028 Bacteria 6141
89 Ga0070717_10237349 3300006028 Bacteria 1607
90 Ga0070717_10304676 3300006028 Bacteria 1417
91 Ga0070715_10025128 3300006163 Bacteria 2356
92 Ga0070715_10071026 3300006163 Bacteria 1555
93 Ga0070716_100009337 3300006173 Bacteria 4886
94 Ga0070712_100033486 3300006175 Bacteria 3477
95 Ga0070712_100075992 3300006175 Bacteria 2417
96 Ga0070712_100158707 3300006175 Bacteria 1745
97 Ga0097621_100194508 3300006237 Bacteria 1758
98 Ga0068871_100019902 3300006358 Bacteria 5132
99 Ga0068871_100032994 3300006358 Bacteria 4095
100 Ga0075428_100268540 3300006844 Bacteria 1836
101 Ga0075428_100355843 3300006844 Bacteria 1571
102 Ga0075430_100028368 3300006846 Bacteria 4755
103 Ga0075431_100087723 3300006847 Bacteria 3210
104 Ga0075434_100019088 3300006871 Bacteria 6626
105 Ga0075434_100559738 3300006871 Bacteria 1163
106 Ga0075429_100024915 3300006880 Bacteria 5193
107 Ga0075429_100233930 3300006880 Unclassified 1610
108 Ga0075429_100507207 3300006880 Unclassified 1057
109 Ga0075436_100018884 3300006914 Unclassified 4721
110 Ga0075436_100043159 3300006914 Bacteria 3109
111 Ga0075435_100107171 3300007076 Bacteria 2321
112 Ga0099795_10031245 3300007788 Bacteria 1832
113 Ga0105240_10000675 3300009093 Bacteria 62663
114 Ga0105247_10040480 3300009101 Bacteria 2848
115 Ga0114129_10013134 3300009147 Bacteria 11798
116 Ga0114129_10032030 3300009147 Bacteria 7431
117 Ga0114129_10083228 3300009147 Bacteria 4446
118 Ga0114129_10227366 3300009147 Bacteria 2514
119 Ga0105243_10294986 3300009148 Bacteria 1467
120 Ga0105242_10027449 3300009176 Bacteria 4520
121 Ga0105237_10128941 3300009545 Bacteria 2524
122 Ga0105238_10014297 3300009551 Bacteria 8024
123 Ga0105249_10019932 3300009553 Bacteria 5987
124 Ga0105249_10166499 3300009553 Bacteria 2134
125 Ga0105249_10721067 3300009553 Unclassified 1058
126 Ga0099796_10016041 3300010159 Bacteria 2204
127 Ga0105239_10020037 3300010375 Bacteria 7380
128 Ga0105246_10118557 3300011119 Bacteria 1957
129 Ga0105246_10133198 3300011119 Bacteria 1859
130 Ga0157371_10076179 3300013102 Bacteria 2375
131 Ga0157369_10009924 3300013105 Bacteria 10880
132 Ga0157374_10075507 3300013296 Bacteria 3185
133 Ga0157378_10032595 3300013297 Unclassified 4604
134 Ga0157378_10097620 3300013297 Bacteria 2678
135 Ga0157378_10190849 3300013297 Unclassified 1932
136 Ga0157375_10002960 3300013308 Bacteria 14745
137 Ga0157375_10041115 3300013308 Bacteria 4461
138 Ga0163163_10392417 3300014325 Unclassified 1446
139 Ga0157380_10139056 3300014326 Bacteria 2083
140 Ga0182008_10046014 3300014497 Bacteria 2169
141 Ga0157377_10013724 3300014745 Bacteria 4107
142 Ga0157379_10009536 3300014968 Bacteria 8453
143 Ga0157376_10105453 3300014969 Bacteria 2472
144 Ga0182005_1017690 3300015265 Bacteria 1972
145 Ga0207666_1001122 3300025271 Bacteria 3166
146 Ga0207673_1001312 3300025290 Bacteria 2693
147 Ga0207697_10000202 3300025315 Bacteria 31881
148 Ga0207697_10003011 3300025315 Bacteria 8478
149 Ga0207697_10014683 3300025315 Bacteria 3246
150 Ga0207653_10030295 3300025885 Unclassified 1746
151 Ga0207692_10145360 3300025898 Unclassified 1353
152 Ga0207645_10044125 3300025907 Bacteria 2853
153 Ga0207684_10230641 3300025910 Bacteria 1597
154 Ga0207684_10267742 3300025910 Unclassified 1474
155 Ga0207684_10296010 3300025910 Bacteria 1395
156 Ga0207695_10000003 3300025913 Bacteria 1368691
157 Ga0207693_10019972 3300025915 Bacteria 5328
158 Ga0207693_10031448 3300025915 Bacteria 4193
159 Ga0207693_10050605 3300025915 Bacteria 3262
160 Ga0207693_10121317 3300025915 Unclassified 2053
161 Ga0207693_10160237 3300025915 Bacteria 1770
162 Ga0207693_10169857 3300025915 Unclassified 1717
163 Ga0207693_10222961 3300025915 Bacteria 1481
164 Ga0207693_10317584 3300025915 Unclassified 1219
165 Ga0207663_10171465 3300025916 Unclassified 1541
166 Ga0207646_10001262 3300025922 Bacteria 31705
167 Ga0207646_10030709 3300025922 Bacteria 4869
168 Ga0207646_10099428 3300025922 Bacteria 2607
169 Ga0207646_10153234 3300025922 Bacteria 2079
170 Ga0207646_10180650 3300025922 Bacteria 1906
171 Ga0207646_10266447 3300025922 Bacteria 1548
172 Ga0207646_10271407 3300025922 Unclassified 1533
173 Ga0207694_10000011 3300025924 Bacteria 417640
174 Ga0207650_10020103 3300025925 Bacteria 4703
175 Ga0207659_10010767 3300025926 Bacteria 5754
176 Ga0207659_10019198 3300025926 Bacteria 4494
177 Ga0207659_10045242 3300025926 Unclassified 3102
178 Ga0207700_10001708 3300025928 Bacteria 12470
179 Ga0207700_10090159 3300025928 Unclassified 2419
180 Ga0207644_10013521 3300025931 Bacteria 5445
181 Ga0207644_10099656 3300025931 Bacteria 2180
182 Ga0207706_10035251 3300025933 Bacteria 4449
183 Ga0207665_10021782 3300025939 Bacteria 4216
184 Ga0207665_10026504 3300025939 Bacteria 3826
185 Ga0207665_10089445 3300025939 Bacteria 2133
186 Ga0207691_10225953 3300025940 Bacteria 1622
187 Ga0207661_10271619 3300025944 Bacteria 1513
188 Ga0207679_10210352 3300025945 Bacteria 1630
189 Ga0207667_10000093 3300025949 Bacteria 145814
190 Ga0207651_10101974 3300025960 Unclassified 2132
191 Ga0207703_10114567 3300026035 Bacteria 2305
192 Ga0207678_10002001 3300026067 Bacteria 18558
193 Ga0207708_10005312 3300026075 Bacteria 9488
194 Ga0207702_10181184 3300026078 Unclassified 1940
195 Ga0207641_10059096 3300026088 Bacteria 3264
196 Ga0207648_10024366 3300026089 Bacteria 5403
197 Ga0207675_100102967 3300026118 Bacteria 2690
198 Ga0207683_10020560 3300026121 Bacteria 5648
199 Ga0268266_10075476 3300028379 Bacteria 2928
200 Ga0268266_10314691 3300028379 Bacteria 1463
201 Ga0268265_10119854 3300028380 Bacteria 2166
202 Ga0268264_10113508 3300028381 Bacteria 2377
203 Ga0265327_10000826 3300031251 Bacteria 46661
204 Ga0307516_10009947 3300031730 Bacteria 10535
205 Ga0307413_10012457 3300031824 Bacteria 4236
206 Ga0307410_10022412 3300031852 Bacteria 3904
207 Ga0307407_10032675 3300031903 Bacteria 2832
208 Ga0373953_0022307 3300035117 Unclassified 2386
209 Ga0373943_0033659 3300035170 Bacteria 2443
210 Ga0373955_0015989 3300035172 Unclassified 3685
211 Ga0373927_0205691 3300035695 Bacteria 1293
212 Ga0373927_0213471 3300035695 Unclassified 1268
213 Ga0373933_0050513 3300035724 Unclassified 2483
214 Ga0373947_0048649 3300035725 Unclassified 2544
215 Ga0373925_0070955 3300037068 Unclassified 2634
216 Ga0373925_0362663 3300037068 Unclassified 1178
217 Ga0395899_0016364 3300037312 Bacteria 5652
218 Ga0395900_0004966 3300037418 Bacteria 13993
219 Ga0395898_0448303 3300037466 Unclassified 1229
220 Ga0395901_0001162 3300038443 Bacteria 27968
221 Ga0395901_0048692 3300038443 Bacteria 4402
222 Ga0451853_2037678 3300041512 Unclassified 1084
223 Ga0466967_0324933 3300045976 Unclassified 1484
224 Ga0495592_0033613 3300046454 Bacteria 3867
225 Ga0495651_0025786 3300046462 Unclassified 4577
226 Ga0495651_0144287 3300046462 Bacteria 1723
227 Ga0495664_0131975 3300046477 Bacteria 1513
228 Ga0495618_0095534 3300046514 Bacteria 1901
229 Ga0495618_0119957 3300046514 Bacteria 1684
230 Ga0495628_0015028 3300046516 Bacteria 6469
231 Ga0495628_0070003 3300046516 Unclassified 2735
232 Ga0495663_0043398 3300046525 Bacteria 1373
233 Ga0495652_0059278 3300046529 Bacteria 3239
234 Ga0495586_0043597 3300046535 Bacteria 2416
235 Ga0495645_0040744 3300046543 Unclassified 3387
236 Ga0495634_0007957 3300046642 Bacteria 7909
237 Ga0495635_0199827 3300046663 Bacteria 1356
238 Ga0495659_0044863 3300046664 Bacteria 1591
239 Ga0495599_0006968 3300046678 Bacteria 6837
240 Ga0495599_0132052 3300046678 Unclassified 1551
241 Ga0495623_0029863 3300046679 Bacteria 3507
242 Ga0495646_0065751 3300046680 Bacteria 2146
243 Ga0495658_0031775 3300046683 Bacteria 2877
244 Ga0495669_0076503 3300046684 Unclassified 1532
245 Ga0495604_0067386 3300047317 Bacteria 2720
246 Ga0495674_0061439 3300047319 Bacteria 3274
247 Ga0495675_0052619 3300047444 Unclassified 2585
248 Ga0495684_0008374 3300047471 Bacteria 8012
249 Ga0495684_0039307 3300047471 Unclassified 3626
250 Ga0496102_0114621 3300048905 Bacteria 2515
251 Ga0496104_0026940 3300048907 Bacteria 5314
252 Ga0496104_0071107 3300048907 Unclassified 3308
253 Ga0496105_0031670 3300048908 Bacteria 4336
254 Ga0496106_0071933 3300048909 Bacteria 2644
255 Ga0496107_0219381 3300048910 Bacteria 1415
256 Ga0496112_0071824 3300048915 Bacteria 3421
257 Ga0496112_0095731 3300048915 Bacteria 2939
258 Ga0496113_0161309 3300048916 Bacteria 1772
259 Ga0496114_0065025 3300048917 Unclassified 3055
260 Ga0496115_0055305 3300048918 Bacteria 3188
261 Ga0495682_0001385 3300049460 Bacteria 13229
262 nmdc:mga05p37_20514_c1 3300050507 Bacteria 7995
263 nmdc:mga05p37_57598_c1 3300050507 Bacteria 4786
264 nmdc:mga05p37_719_c1 3300050507 Bacteria 36641
265 nmdc:mga09592_237905_c1 3300050508 Bacteria 1578
266 nmdc:mga09592_49050_c1 3300050508 Bacteria 3559
267 nmdc:mga09592_60925_c1 3300050508 Bacteria 3191
268 nmdc:mga0qj67_17870_c1 3300050509 Bacteria 5397
269 nmdc:mga06r32_383494_c1 3300050510 Bacteria 1388
270 nmdc:mga08y16_577374_c1 3300050511 Unclassified 1135
271 nmdc:mga0n895_14411_c1 3300050512 Bacteria 7179
272 nmdc:mga0n895_524319_c1 3300050512 Bacteria 1192
273 nmdc:mga08x19_133650_c1 3300050514 Bacteria 1671
274 nmdc:mga08x19_9382_c1 3300050514 Bacteria 5859
275 nmdc:mga0a205_68029_c1 3300050515 Bacteria 3440
276 Ga0495601_0027587 3300053077 Unclassified 3511
277 Ga0065715_10093311
278 JGI25405J52794_10001213
279 Ga0065715_10009372
280 Ga0065715_10103569
281 Ga0065715_10124068
282 Ga0070683_100020623
283 Ga0070683_100034751
284 Ga0070683_100095116
285 Ga0070670_100009897
286 Ga0070666_10268849
287 Ga0070689_100005816
288 Ga0070661_100012159
289 Ga0070675_100002406
290 Ga0070675_100064491
291 Ga0070671_100026415
292 Ga0070671_100064461
293 Ga0070671_100077885
294 Ga0070688_100072332
295 Ga0070659_100003285
296 Ga0070659_100176967
297 Ga0070703_10037151
298 Ga0070713_100138454
299 Ga0070701_10080095
300 Ga0070705_100000217
301 Ga0070705_100027825
302 Ga0070705_100215270
303 Ga0070694_100111788
304 Ga0070708_100026406
305 Ga0070708_100070343
306 Ga0070708_100133816
307 Ga0070708_100268288
308 Ga0070708_100309773
309 Ga0070708_100386478
310 Ga0070663_100011029
311 Ga0070685_10024327
312 Ga0070706_100004605
313 Ga0070706_100024443
314 Ga0070706_100185271
315 Ga0070707_100020780
316 Ga0070707_100026054
317 Ga0070707_100031549
318 Ga0070707_100112101
319 Ga0070707_100160580
320 Ga0070707_100163163
321 Ga0070707_100173588
322 Ga0070707_100193236
323 Ga0070707_100507704
324 Ga0070698_100006769
325 Ga0070698_100046196
326 Ga0070698_100051791
327 Ga0070698_100097586
328 Ga0070698_100132213
329 Ga0070698_100179360
330 Ga0070698_100227232
331 Ga0070699_100000005
332 Ga0070699_100000018
333 Ga0070699_100016863
334 Ga0070699_100028181
335 Ga0070699_100041625
336 Ga0070699_100100299
337 Ga0070699_100167564
338 Ga0070699_100170443
339 Ga0070684_100001239
340 Ga0070684_100043721
341 Ga0070697_100009582
342 Ga0070697_100086514
343 Ga0070686_100053385
344 Ga0070695_100062391
345 Ga0070695_100116466
346 Ga0070695_100227792
347 Ga0070696_100000268
348 Ga0070665_100054303
349 Ga0070665_100362059
350 Ga0070704_100018794
351 Ga0068852_100131494
352 Ga0068861_100204701
353 Ga0068863_100488271
354 Ga0068860_100096009
355 Ga0081455_10001439
356 Ga0081455_10001581
357 Ga0081455_10017516
358 Ga0081455_10019468
359 Ga0081455_10036241
360 Ga0081540_1000215
361 Ga0081539_10001684
362 Ga0081539_10009153
363 Ga0081539_10039313
364 Ga0070717_10014107
365 Ga0070717_10237349
366 Ga0070717_10304676
367 Ga0070715_10025128
368 Ga0070715_10071026
369 Ga0070716_100009337
370 Ga0070712_100033486
371 Ga0070712_100075992
372 Ga0070712_100158707
373 Ga0097621_100194508
374 Ga0068871_100019902
375 Ga0068871_100032994
376 Ga0075428_100268540
377 Ga0075428_100355843
378 Ga0075430_100028368
379 Ga0075431_100087723
380 Ga0075434_100019088
381 Ga0075434_100559738
382 Ga0075429_100024915
383 Ga0075429_100233930
384 Ga0075429_100507207
385 Ga0075436_100018884
386 Ga0075436_100043159
387 Ga0075435_100107171
388 Ga0099795_10031245
389 Ga0105240_10000675
390 Ga0105247_10040480
391 Ga0114129_10013134
392 Ga0114129_10032030
393 Ga0114129_10083228
394 Ga0114129_10227366
395 Ga0105243_10294986
396 Ga0105242_10027449
397 Ga0105237_10128941
398 Ga0105238_10014297
399 Ga0105249_10019932
400 Ga0105249_10166499
401 Ga0105249_10721067
402 Ga0099796_10016041
403 Ga0105239_10020037
404 Ga0105246_10118557
405 Ga0105246_10133198
406 Ga0157371_10076179
407 Ga0157369_10009924
408 Ga0157374_10075507
409 Ga0157378_10032595
410 Ga0157378_10097620
411 Ga0157378_10190849
412 Ga0157375_10002960
413 Ga0157375_10041115
414 Ga0163163_10392417
415 Ga0157380_10139056
416 Ga0182008_10046014
417 Ga0157377_10013724
418 Ga0157379_10009536
419 Ga0157376_10105453
420 Ga0182005_1017690
421 Ga0207666_1001122
422 Ga0207673_1001312
423 Ga0207697_10000202
424 Ga0207697_10003011
425 Ga0207697_10014683
426 Ga0207653_10030295
427 Ga0207692_10145360
428 Ga0207645_10044125
429 Ga0207684_10230641
430 Ga0207684_10267742
431 Ga0207684_10296010
432 Ga0207695_10000003
433 Ga0207693_10019972
434 Ga0207693_10031448
435 Ga0207693_10050605
436 Ga0207693_10121317
437 Ga0207693_10160237
438 Ga0207693_10169857
439 Ga0207693_10222961
440 Ga0207693_10317584
441 Ga0207663_10171465
442 Ga0207646_10001262
443 Ga0207646_10030709
444 Ga0207646_10099428
445 Ga0207646_10153234
446 Ga0207646_10180650
447 Ga0207646_10266447
448 Ga0207646_10271407
449 Ga0207694_10000011
450 Ga0207650_10020103
451 Ga0207659_10010767
452 Ga0207659_10019198
453 Ga0207659_10045242
454 Ga0207700_10001708
455 Ga0207700_10090159
456 Ga0207644_10013521
457 Ga0207644_10099656
458 Ga0207706_10035251
459 Ga0207665_10021782
460 Ga0207665_10026504
461 Ga0207665_10089445
462 Ga0207691_10225953
463 Ga0207661_10271619
464 Ga0207679_10210352
465 Ga0207667_10000093
466 Ga0207651_10101974
467 Ga0207703_10114567
468 Ga0207678_10002001
469 Ga0207708_10005312
470 Ga0207702_10181184
471 Ga0207641_10059096
472 Ga0207648_10024366
473 Ga0207675_100102967
474 Ga0207683_10020560
475 Ga0268266_10075476
476 Ga0268266_10314691
477 Ga0268265_10119854
478 Ga0268264_10113508
479 Ga0265327_10000826
480 Ga0307516_10009947
481 Ga0307413_10012457
482 Ga0307410_10022412
483 Ga0307407_10032675
484 Ga0373953_0022307
485 Ga0373943_0033659
486 Ga0373955_0015989
487 Ga0373927_0205691
488 Ga0373927_0213471
489 Ga0373933_0050513
490 Ga0373947_0048649
491 Ga0373925_0070955
492 Ga0373925_0362663
493 Ga0395899_0016364
494 Ga0395900_0004966
495 Ga0395898_0448303
496 Ga0395901_0001162
497 Ga0395901_0048692
498 Ga0451853_2037678
499 Ga0466967_0324933
500 Ga0495592_0033613
501 Ga0495651_0025786
502 Ga0495651_0144287
503 Ga0495664_0131975
504 Ga0495618_0095534
505 Ga0495618_0119957
506 Ga0495628_0015028
507 Ga0495628_0070003
508 Ga0495663_0043398
509 Ga0495652_0059278
510 Ga0495586_0043597
511 Ga0495645_0040744
512 Ga0495634_0007957
513 Ga0495635_0199827
514 Ga0495659_0044863
515 Ga0495599_0006968
516 Ga0495599_0132052
517 Ga0495623_0029863
518 Ga0495646_0065751
519 Ga0495658_0031775
520 Ga0495669_0076503
521 Ga0495604_0067386
522 Ga0495674_0061439
523 Ga0495675_0052619
524 Ga0495684_0008374
525 Ga0495684_0039307
526 Ga0496102_0114621
527 Ga0496104_0026940
528 Ga0496104_0071107
529 Ga0496105_0031670
530 Ga0496106_0071933
531 Ga0496107_0219381
532 Ga0496112_0071824
533 Ga0496112_0095731
534 Ga0496113_0161309
535 Ga0496114_0065025
536 Ga0496115_0055305
537 Ga0495682_0001385
538 nmdc:mga05p37_20514_c1
539 nmdc:mga05p37_57598_c1
540 nmdc:mga05p37_719_c1
541 nmdc:mga09592_237905_c1
542 nmdc:mga09592_49050_c1
543 nmdc:mga09592_60925_c1
544 nmdc:mga0qj67_17870_c1
545 nmdc:mga06r32_383494_c1
546 nmdc:mga08y16_577374_c1
547 nmdc:mga0n895_14411_c1
548 nmdc:mga0n895_524319_c1
549 nmdc:mga08x19_133650_c1
550 nmdc:mga08x19_9382_c1
551 nmdc:mga0a205_68029_c1
552 Ga0495601_0027587

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

79

359

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gn2-assembly1.cif.gz_A crystal structure of tetrameric biodegradative threonine deaminase (tdcb) from salmonella typhimurium in complex with cmp at 2.5a resolution (hexagonal form) 0.901 3 317
2gn2-assembly1.cif.gz_A crystal structure of tetrameric biodegradative threonine deaminase (tdcb) from salmonella typhimurium in complex with cmp at 2.5a resolution (hexagonal form) 0.8876 3 317
1ve5-assembly1.cif.gz_B crystal structure of t.th. hb8 threonine deaminase 0.8826 10 311
6lut-assembly1.cif.gz_B crystal structure of serine racemase from dictyostelium discoideum. 0.8819 9 311
2zpu-assembly1.cif.gz_A crystal structure of modified serine racemase from s.pombe. 0.8818 5 318
ID Description Score Start End Superfamily
af_A0A0G2KPX8_278_353_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9106 151 220 3.40.50.1100
3iauB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9078 149 317 3.40.50.1100
1wtcA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8972 6 318 3.40.50.1100
1wtcA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8858 6 318 3.40.50.1100
1ve5C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8749 10 307 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A538TYI1-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9766 2 318 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
AF-A0A534ELY7-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9741 3 318 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
AF-A0A8B6H972-F1-model_v4 L-serine deaminase (L-threonine dehydratase) 0.9697 156 318 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
AF-A0A538TYI1-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9676 2 318 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097
AF-A0A534GBF2-F1-model_v4 Pyridoxal-phosphate dependent enzyme 0.9628 2 272 GO:0003941
GO:0004794
GO:0006565
GO:0006567
GO:0009097

Map