F380784

General Info

Members Datasets Scaffolds Average Seq Length
275 168 252 425

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221598|2644001833
Length 469
Sequence NRDRLAVARYGYTLRKTSPMNRARKVTGLAARGVVLAAAFAAAAAPPYAWAQAPAEQPAAVAAPAAPAAPQGLSESVAAVVNDQIISTYDLAQRMRLLIATSGIQPTQQNIAQFQREALISLVDERLQLQELRRQERDQKMSIVATDDELNEEIADMAKNNNMTADQFVASLQGQGIGVGTLKEQIRAQVSWQRWIRGRYGSRLRVGEDQVKAAQQRMEAAASKPQYQISEVFLDANRVGGMETAMTGAAQLINQMQQGAPFPAVARQFSASATAANGGDAGWISSGEMAPEVDAALEQMRPGQLSQPIQVRDGVYIIYLREKRSGATASVVNLKQAALALPQNATADQVAAATATLNTLRGQVTGCGDLEAKAAGVTGVVAGDLGEAEIKDLSPAFRQAAETLQPGQLSEPIRTAAGLHVLAVCSKRAAGAEQVTAEQIESRLFGQQLSMIARRYMRDLRNSATIETK

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
3 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
4 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
5 2643221583 Caulobacter sp. Root655 Isolate Unclassified
6 2643221584 Caulobacter sp. Root656 Isolate Unclassified
7 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
8 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
9 2643221640 Caulobacter sp. Root342 Isolate Unclassified
10 2643221642 Caulobacter sp. Root343 Isolate Unclassified
11 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
12 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
13 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
14 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
15 2818991435 Caulobacter henricii 536 Isolate Unclassified
16 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
17 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
18 2849560528 Caulobacter zeae 410 Isolate Unclassified
19 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
20 2851153111 Caulobacter radicis 736 Isolate Unclassified
21 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
22 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
23 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
24 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
25 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
26 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
29 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
30 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
31 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
102 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
112 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
113 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
117 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
127 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
139 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
151 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
154 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
157 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
158 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
159 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
160 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
161 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
164 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
165 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
166 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
167 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
168 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.64
Metatranscriptomes 0
Isolates 8.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16
Nodule 0
Rhizoplane 0.73
Rhizosphere 69.82
Stem 0
Stem Tuber 0
Unclassified 13.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10083338 3300003316 Bacteria 3415
2 Ga0055536_1001001 3300003781 Bacteria 17944
3 Ga0055536_1001303 3300003781 Bacteria 15352
4 Ga0055530_10000600 3300003791 Bacteria 31145
5 Ga0055531_10001093 3300003794 Bacteria 21245
6 Ga0055531_10001770 3300003794 Bacteria 15367
7 Ga0065165_1001045 3300005262 Bacteria 33371
8 Ga0070658_10006335 3300005327 Bacteria 9590
9 Ga0070670_100000037 3300005331 Bacteria 156070
10 Ga0070670_100094530 3300005331 Bacteria 2571
11 Ga0070670_100110502 3300005331 Bacteria 2368
12 Ga0070680_100001082 3300005336 Bacteria 19577
13 Ga0070680_100032590 3300005336 Bacteria 4195
14 Ga0070680_100115213 3300005336 Bacteria 2239
15 Ga0070660_100034598 3300005339 Bacteria 3818
16 Ga0070668_100001202 3300005347 Bacteria 18371
17 Ga0070668_100007707 3300005347 Bacteria 7991
18 Ga0070668_100008467 3300005347 Bacteria 7639
19 Ga0070668_100101640 3300005347 Bacteria 2279
20 Ga0070671_100002006 3300005355 Bacteria 15644
21 Ga0070671_100040383 3300005355 Bacteria 3875
22 Ga0070659_100003991 3300005366 Bacteria 10505
23 Ga0070659_100008287 3300005366 Bacteria 7588
24 Ga0070667_100000083 3300005367 Bacteria 118261
25 Ga0070667_100001474 3300005367 Bacteria 21101
26 Ga0070681_10006925 3300005458 Bacteria 11038
27 Ga0070681_10007780 3300005458 Bacteria 10478
28 Ga0070681_10009741 3300005458 Bacteria 9455
29 Ga0070679_100005529 3300005530 Bacteria 11707
30 Ga0070679_100006826 3300005530 Bacteria 10644
31 Ga0070679_100111723 3300005530 Bacteria 2719
32 Ga0068853_100005860 3300005539 Bacteria 9681
33 Ga0070665_100001582 3300005548 Bacteria 26236
34 Ga0070665_100001867 3300005548 Bacteria 23910
35 Ga0070665_100007216 3300005548 Bacteria 11295
36 Ga0068855_100008754 3300005563 Bacteria 12238
37 Ga0068855_100023206 3300005563 Bacteria 7433
38 Ga0068855_100029275 3300005563 Bacteria 6586
39 Ga0068852_100031942 3300005616 Bacteria 4353
40 Ga0068859_100001659 3300005617 Bacteria 22653
41 Ga0068864_100000116 3300005618 Bacteria 79213
42 Ga0068864_100000363 3300005618 Bacteria 39706
43 Ga0068861_100018341 3300005719 Bacteria 4985
44 Ga0068863_100000007 3300005841 Bacteria 257578
45 Ga0068863_100000512 3300005841 Bacteria 39481
46 Ga0068863_100002761 3300005841 Bacteria 17386
47 Ga0068863_100159174 3300005841 Bacteria 2163
48 Ga0068858_100000031 3300005842 Bacteria 143397
49 Ga0068858_100003765 3300005842 Bacteria 14999
50 Ga0068858_100008025 3300005842 Bacteria 10166
51 Ga0068860_100000151 3300005843 Bacteria 112208
52 Ga0068860_100000348 3300005843 Bacteria 62147
53 Ga0068860_100002516 3300005843 Bacteria 19228
54 Ga0068862_100000235 3300005844 Bacteria 61301
55 Ga0068862_100116224 3300005844 Bacteria 2353
56 Ga0075362_10016743 3300006177 Bacteria 3007
57 Ga0068865_100000644 3300006881 Bacteria 19735
58 Ga0097620_100001659 3300006931 Bacteria 22653
59 Ga0105240_10005723 3300009093 Bacteria 18440
60 Ga0105240_10021374 3300009093 Bacteria 8607
61 Ga0105240_10180860 3300009093 Bacteria 2488
62 Ga0105240_10206003 3300009093 Bacteria 2302
63 Ga0105240_10313510 3300009093 Bacteria 1790
64 Ga0105248_10000335 3300009177 Bacteria 55396
65 Ga0105248_10005462 3300009177 Bacteria 13969
66 Ga0105248_10028331 3300009177 Bacteria 6241
67 Ga0105237_10053705 3300009545 Bacteria 4041
68 Ga0105238_10020588 3300009551 Bacteria 6718
69 Ga0105238_10027337 3300009551 Bacteria 5812
70 Ga0105238_10030588 3300009551 Bacteria 5481
71 Ga0105238_10222966 3300009551 Bacteria 1862
72 Ga0105249_10003153 3300009553 Bacteria 14264
73 Ga0105239_10148945 3300010375 Bacteria 2611
74 Ga0157373_10000735 3300013100 Bacteria 25451
75 Ga0157373_10000817 3300013100 Bacteria 24121
76 Ga0163162_10012845 3300013306 Bacteria 8180
77 Ga0163162_10241637 3300013306 Bacteria 1937
78 Ga0157372_10095507 3300013307 Bacteria 3387
79 Ga0163163_10000972 3300014325 Bacteria 24375
80 Ga0157379_10000578 3300014968 Bacteria 29653
81 Ga0157379_10018921 3300014968 Bacteria 6078
82 Ga0157379_10040199 3300014968 Bacteria 4173
83 Ga0213876_10000134 3300021384 Bacteria 80875
84 Ga0209026_1003226 3300025250 Bacteria 5492
85 Ga0209676_1000336 3300025292 Bacteria 89848
86 Ga0209676_1000476 3300025292 Bacteria 66212
87 Ga0209564_1019208 3300025295 Bacteria 2566
88 Ga0209564_1025802 3300025295 Bacteria 1964
89 Ga0209758_1001461 3300025297 Bacteria 27740
90 Ga0209050_1000431 3300025298 Bacteria 76895
91 Ga0209050_1000506 3300025298 Bacteria 66220
92 Ga0209050_1000843 3300025298 Bacteria 42044
93 Ga0209050_1010582 3300025298 Bacteria 4520
94 Ga0209257_1000159 3300025304 Bacteria 178767
95 Ga0209257_1000865 3300025304 Bacteria 43126
96 Ga0209257_1001084 3300025304 Bacteria 35623
97 Ga0209257_1003153 3300025304 Bacteria 14704
98 Ga0209257_1003633 3300025304 Bacteria 12968
99 Ga0207705_10003547 3300025909 Bacteria 11876
100 Ga0207705_10043326 3300025909 Bacteria 3233
101 Ga0207705_10104939 3300025909 Bacteria 2082
102 Ga0207707_10043712 3300025912 Bacteria 3906
103 Ga0207695_10000571 3300025913 Bacteria 75439
104 Ga0207695_10001303 3300025913 Bacteria 42365
105 Ga0207695_10015043 3300025913 Bacteria 9131
106 Ga0207660_10080415 3300025917 Bacteria 2393
107 Ga0207652_10009182 3300025921 Bacteria 7958
108 Ga0207652_10045235 3300025921 Bacteria 3752
109 Ga0207694_10024886 3300025924 Bacteria 4547
110 Ga0207650_10000062 3300025925 Bacteria 149776
111 Ga0207650_10079266 3300025925 Bacteria 2487
112 Ga0207644_10002468 3300025931 Bacteria 11924
113 Ga0207690_10000602 3300025932 Bacteria 23326
114 Ga0207690_10008916 3300025932 Bacteria 5955
115 Ga0207690_10030011 3300025932 Bacteria 3463
116 Ga0207704_10000282 3300025938 Bacteria 24228
117 Ga0207711_10000857 3300025941 Bacteria 29403
118 Ga0207711_10010099 3300025941 Bacteria 7844
119 Ga0207679_10006422 3300025945 Bacteria 7428
120 Ga0207667_10004915 3300025949 Bacteria 16321
121 Ga0207667_10040703 3300025949 Bacteria 4948
122 Ga0207667_10112143 3300025949 Bacteria 2812
123 Ga0207712_10008875 3300025961 Bacteria 6356
124 Ga0207668_10000130 3300025972 Bacteria 53528
125 Ga0207668_10001888 3300025972 Bacteria 12260
126 Ga0207668_10004159 3300025972 Bacteria 8489
127 Ga0207658_10000218 3300025986 Bacteria 60270
128 Ga0207703_10000038 3300026035 Bacteria 175917
129 Ga0207703_10001849 3300026035 Bacteria 18837
130 Ga0207703_10003973 3300026035 Bacteria 12252
131 Ga0207703_10011965 3300026035 Bacteria 6758
132 Ga0207678_10071868 3300026067 Bacteria 2966
133 Ga0207678_10078034 3300026067 Bacteria 2836
134 Ga0207641_10000012 3300026088 Bacteria 375486
135 Ga0207641_10003277 3300026088 Bacteria 14400
136 Ga0207641_10137324 3300026088 Bacteria 2202
137 Ga0207676_10000179 3300026095 Bacteria 55697
138 Ga0207676_10001335 3300026095 Bacteria 18366
139 Ga0207676_10016847 3300026095 Bacteria 5292
140 Ga0207676_10066591 3300026095 Bacteria 2874
141 Ga0207675_100012705 3300026118 Bacteria 7869
142 Ga0209981_1000829 3300027378 Bacteria 3901
143 Ga0268266_10000064 3300028379 Bacteria 249533
144 Ga0268266_10021275 3300028379 Bacteria 5526
145 Ga0268266_10024193 3300028379 Bacteria 5168
146 Ga0268266_10057998 3300028379 Bacteria 3333
147 Ga0268265_10000600 3300028380 Bacteria 36213
148 Ga0268265_10018834 3300028380 Bacteria 4789
149 Ga0268264_10000046 3300028381 Bacteria 364597
150 Ga0268264_10000059 3300028381 Bacteria 306927
151 Ga0268264_10004778 3300028381 Bacteria 11497
152 Ga0307517_10007921 3300028786 Bacteria 15356
153 Ga0307517_10051162 3300028786 Bacteria 4178
154 Ga0307515_10085772 3300028794 Bacteria 4024
155 Ga0307511_10006795 3300030521 Bacteria 11535
156 Ga0265327_10005679 3300031251 Bacteria 10319
157 Ga0307513_10000082 3300031456 Bacteria 131779
158 Ga0307513_10001006 3300031456 Bacteria 40812
159 Ga0307513_10001884 3300031456 Bacteria 29799
160 Ga0307513_10026790 3300031456 Bacteria 6631
161 Ga0307516_10000004 3300031730 Bacteria 367451
162 Ga0373946_0019209 3300035171 Bacteria 2632
163 Ga0373927_0002386 3300035695 Bacteria 13696
164 Ga0373925_0000039 3300037068 Bacteria 138537
165 Ga0395899_0000100 3300037312 Bacteria 151710
166 Ga0395900_0000009 3300037418 Bacteria 476249
167 Ga0395900_0120500 3300037418 Bacteria 2692
168 Ga0395898_0014151 3300037466 Bacteria 8203
169 Ga0395898_0015962 3300037466 Bacteria 7694
170 Ga0395905_0017972 3300037471 Bacteria 6714
171 Ga0395905_0041416 3300037471 Bacteria 4322
172 Ga0395905_0070258 3300037471 Bacteria 3280
173 Ga0395901_0000014 3300038443 Bacteria 375100
174 Ga0395901_0072084 3300038443 Bacteria 3600
175 Ga0436365_0769901 3300039437 Bacteria 4897
176 Ga0436365_1830840 3300039437 Bacteria 45078
177 Ga0439446_0010630 3300042156 Bacteria 2483
178 Ga0495627_000269 3300046453 Bacteria 52989
179 Ga0495590_0000439 3300046457 Bacteria 20685
180 Ga0495638_0000347 3300046460 Bacteria 58280
181 Ga0495638_0001908 3300046460 Bacteria 17965
182 Ga0495638_0002756 3300046460 Bacteria 14121
183 Ga0495650_0000007 3300046471 Bacteria 718072
184 Ga0495650_0032580 3300046471 Bacteria 2329
185 Ga0495607_0082546 3300046501 Bacteria 1763
186 Ga0495583_0000037 3300046506 Bacteria 244437
187 Ga0495606_0011595 3300046507 Bacteria 7167
188 Ga0495606_0109704 3300046507 Bacteria 1666
189 Ga0495610_0001339 3300046512 Bacteria 21852
190 Ga0495610_0007667 3300046512 Bacteria 7130
191 Ga0495610_0014364 3300046512 Bacteria 4654
192 Ga0495616_0000112 3300046513 Bacteria 71263
193 Ga0495631_0007240 3300046518 Bacteria 5657
194 Ga0495632_0004924 3300046519 Bacteria 8954
195 Ga0495637_0014391 3300046520 Bacteria 3732
196 Ga0495643_0004585 3300046522 Bacteria 9622
197 Ga0495648_0000777 3300046524 Bacteria 34002
198 Ga0495654_0001262 3300046530 Bacteria 17815
199 Ga0495609_0012477 3300046538 Bacteria 4030
200 Ga0495597_0000930 3300046542 Bacteria 22738
201 Ga0495668_0000252 3300046616 Bacteria 76175
202 Ga0495668_0007545 3300046616 Bacteria 6940
203 Ga0495668_0010098 3300046616 Bacteria 5744
204 Ga0495668_0117375 3300046616 Bacteria 1455
205 Ga0495611_0061964 3300046648 Bacteria 1701
206 Ga0495625_0051716 3300046660 Bacteria 2944
207 Ga0495669_0000172 3300046684 Bacteria 40888
208 Ga0495673_0000402 3300047469 Bacteria 50662
209 Ga0495673_0001079 3300047469 Bacteria 23944
210 Ga0495681_0019205 3300047470 Bacteria 3740
211 Ga0495681_0041028 3300047470 Bacteria 2250
212 Ga0495686_0000572 3300047472 Bacteria 52381
213 Ga0495686_0011771 3300047472 Bacteria 6155
214 Ga0496115_0004093 3300048918 Bacteria 10529
215 Ga0496115_0189930 3300048918 Bacteria 1697
216 Ga0496117_0020274 3300048920 Bacteria 5425
217 Ga0496118_0010326 3300048921 Bacteria 9260
218 Ga0496119_0012673 3300048922 Bacteria 6822
219 Ga0496121_0000009 3300048924 Bacteria 836971
220 Ga0496124_0118729 3300048927 Bacteria 2117
221 Ga0496125_0031109 3300048928 Bacteria 4763
222 Ga0496126_0000898 3300048929 Bacteria 51758
223 Ga0495678_000643 3300049459 Bacteria 32159
224 Ga0501043_0158604 3300049579 Bacteria 1769
225 Ga0501047_0004587 3300049581 Bacteria 12994
226 Ga0501047_0029991 3300049581 Bacteria 5244
227 Ga0501048_0042194 3300049582 Bacteria 3267
228 Ga0501257_003287 3300049686 Bacteria 3457
229 Ga0501044_0151940 3300049823 Bacteria 2297
230 nmdc:mga07m45_187_c1 3300050496 Bacteria 14451
231 Ga0500578_0000092 3300053086 Bacteria 102206
232 Ga0500644_0000692 3300053088 Bacteria 12174
233 Ga0500554_001396 3300053102 Bacteria 4674
234 Ga0500562_000727 3300053108 Bacteria 7984
235 Ga0500562_000800 3300053108 Bacteria 7686
236 Ga0500594_0000055 3300053118 Bacteria 35289
237 Ga0500608_000026 3300053122 Bacteria 68633
238 Ga0500608_005430 3300053122 Bacteria 5061
239 Ga0500658_0000623 3300053134 Bacteria 14677
240 Ga0500559_0003182 3300053136 Bacteria 8161
241 Ga0500564_000017 3300053138 Bacteria 52534
242 Ga0500577_0002936 3300053142 Bacteria 4391
243 Ga0500590_028082 3300053148 Bacteria 2919
244 Ga0500622_0000047 3300053156 Bacteria 149427
245 Ga0500622_0007105 3300053156 Bacteria 6399
246 Ga0500638_006489 3300053162 Bacteria 4793
247 Ga0500636_0027719 3300053177 Bacteria 3346
248 Ga0500637_0019326 3300053178 Bacteria 3672
249 Ga0500637_0029333 3300053178 Bacteria 3051
250 Ga0500645_001168 3300053730 Bacteria 14055
251 Ga0500609_000649 3300053731 Bacteria 5296
252 Ga0500596_005892 3300053735 Bacteria 2116

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300047469 Ga0495673_0001079 Ga0495673_0001079_14277_15449 346
2 3300026095 Ga0207676_10066591 Ga0207676_100665912 373
3 3300046507 Ga0495606_0109704 Ga0495606_0109704_119_1399 378
4 3300035171 Ga0373946_0019209 Ga0373946_0019209_75_1478 379
5 3300035695 Ga0373927_0002386 Ga0373927_0002386_10534_11937 379
6 3300037068 Ga0373925_0000039 Ga0373925_0000039_88014_89417 379
7 3300005366 Ga0070659_100008287 Ga0070659_1000082875 386
8 3300009177 Ga0105248_10028331 Ga0105248_100283312 388
9 3300025941 Ga0207711_10010099 Ga0207711_1001009910 388
10 3300048920 Ga0496117_0020274 Ga0496117_0020274_1659_3065 389
11 3300048921 Ga0496118_0010326 Ga0496118_0010326_463_1869 389
12 3300048922 Ga0496119_0012673 Ga0496119_0012673_1439_2845 389
13 3300049579 Ga0501043_0158604 Ga0501043_0158604_590_1759 389
14 3300009551 Ga0105238_10020588 Ga0105238_100205882 395
15 3300049581 Ga0501047_0029991 Ga0501047_0029991_1866_3218 395
16 3300049823 Ga0501044_0151940 Ga0501044_0151940_320_1672 395
17 3300006881 Ga0068865_100000644 Ga0068865_10000064416 396
18 3300025932 Ga0207690_10030011 Ga0207690_100300112 396
19 3300025938 Ga0207704_10000282 Ga0207704_100002824 396
20 3300005327 Ga0070658_10006335 Ga0070658_100063353 397
21 3300005336 Ga0070680_100001082 Ga0070680_10000108211 397
22 3300005366 Ga0070659_100003991 Ga0070659_10000399111 397
23 3300005458 Ga0070681_10009741 Ga0070681_100097416 397
24 3300005530 Ga0070679_100006826 Ga0070679_1000068265 397
25 3300005539 Ga0068853_100005860 Ga0068853_1000058602 397
26 3300005548 Ga0070665_100001582 Ga0070665_10000158211 397
27 3300009551 Ga0105238_10222966 Ga0105238_102229661 397
28 3300013306 Ga0163162_10241637 Ga0163162_102416372 397
29 3300025932 Ga0207690_10000602 Ga0207690_1000060214 397
30 3300025945 Ga0207679_10006422 Ga0207679_100064222 397
31 3300028379 Ga0268266_10000064 Ga0268266_1000006411 397
32 3300039437 Ga0436365_0769901 Ga0436365_0769901_2369_3562 397
33 3300009545 Ga0105237_10053705 Ga0105237_100537052 400
34 3300005336 Ga0070680_100032590 Ga0070680_1000325902 401
35 3300005458 Ga0070681_10007780 Ga0070681_100077803 401
36 3300005530 Ga0070679_100005529 Ga0070679_1000055297 401
37 3300005563 Ga0068855_100023206 Ga0068855_1000232062 401
38 3300009093 Ga0105240_10021374 Ga0105240_100213744 401
39 3300009551 Ga0105238_10030588 Ga0105238_100305884 401
40 3300013100 Ga0157373_10000735 Ga0157373_1000073517 401
41 3300025912 Ga0207707_10043712 Ga0207707_100437123 401
42 3300025913 Ga0207695_10001303 Ga0207695_100013034 401
43 3300025917 Ga0207660_10080415 Ga0207660_100804152 401
44 3300025921 Ga0207652_10045235 Ga0207652_100452352 401
45 3300025949 Ga0207667_10040703 Ga0207667_100407034 401
46 3300005530 Ga0070679_100111723 Ga0070679_1001117232 402
47 3300031730 Ga0307516_10000004 Ga0307516_100000048 402
48 3300046460 Ga0495638_0002756 Ga0495638_0002756_6804_8132 402
49 3300046512 Ga0495610_0001339 Ga0495610_0001339_14562_15890 402
50 3300048924 Ga0496121_0000009 Ga0496121_0000009_681864_683267 402
51 3300013100 Ga0157373_10000817 Ga0157373_1000081717 405
52 3300021384 Ga0213876_10000134 Ga0213876_1000013469 405
53 3300009551 Ga0105238_10027337 Ga0105238_100273373 406
54 3300026067 Ga0207678_10078034 Ga0207678_100780342 406
55 3300039437 Ga0436365_1830840 Ga0436365_1830840_23159_24451 406
56 3300046457 Ga0495590_0000439 Ga0495590_0000439_776_2122 410
57 3300046460 Ga0495638_0000347 Ga0495638_0000347_18378_19724 410
58 3300046471 Ga0495650_0000007 Ga0495650_0000007_235756_237087 410
59 3300046518 Ga0495631_0007240 Ga0495631_0007240_1036_2382 410
60 3300046530 Ga0495654_0001262 Ga0495654_0001262_3675_5006 410
61 3300046660 Ga0495625_0051716 Ga0495625_0051716_126_1457 410
62 3300047470 Ga0495681_0019205 Ga0495681_0019205_1311_2645 410
63 3300047470 Ga0495681_0041028 Ga0495681_0041028_71_1402 410
64 3300047472 Ga0495686_0000572 Ga0495686_0000572_32616_33962 410
65 3300053108 Ga0500562_000727 Ga0500562_000727_6559_7905 410
66 3300053156 Ga0500622_0000047 Ga0500622_0000047_32636_33982 410
67 3300006177 Ga0075362_10016743 Ga0075362_100167432 411
68 3300025909 Ga0207705_10104939 Ga0207705_101049392 411
69 3300028786 Ga0307517_10007921 Ga0307517_100079216 411
70 3300046453 Ga0495627_000269 Ga0495627_000269_13227_14549 411
71 3300009093 Ga0105240_10005723 Ga0105240_100057233 412
72 3300028794 Ga0307515_10085772 Ga0307515_100857722 412
73 3300046471 Ga0495650_0032580 Ga0495650_0032580_825_2180 412
74 3300046520 Ga0495637_0014391 Ga0495637_0014391_595_1950 412
75 3300046616 Ga0495668_0007545 Ga0495668_0007545_869_2224 412
76 3300048927 Ga0496124_0118729 Ga0496124_0118729_687_2018 412
77 3300049459 Ga0495678_000643 Ga0495678_000643_7054_8409 412
78 3300053086 Ga0500578_0000092 Ga0500578_0000092_97087_98442 412
79 3300053118 Ga0500594_0000055 Ga0500594_0000055_32520_33875 412
80 3300053134 Ga0500658_0000623 Ga0500658_0000623_10436_11767 412
81 3300009093 Ga0105240_10180860 Ga0105240_101808601 414
82 3300013307 Ga0157372_10095507 Ga0157372_100955072 414
83 3300025250 Ga0209026_1003226 Ga0209026_10032263 414
84 3300025909 Ga0207705_10043326 Ga0207705_100433264 414
85 3300046684 Ga0495669_0000172 Ga0495669_0000172_13883_15271 414
86 3300003791 Ga0055530_10000600 Ga0055530_1000060018 415
87 3300005339 Ga0070660_100034598 Ga0070660_1000345982 415
88 3300005458 Ga0070681_10006925 Ga0070681_100069253 415
89 3300005563 Ga0068855_100029275 Ga0068855_1000292755 415
90 3300025297 Ga0209758_1001461 Ga0209758_100146128 415
91 3300025298 Ga0209050_1000431 Ga0209050_100043128 415
92 3300025304 Ga0209257_1001084 Ga0209257_100108418 415
93 3300025913 Ga0207695_10015043 Ga0207695_100150432 415
94 3300031456 Ga0307513_10001006 Ga0307513_1000100638 415
95 3300031456 Ga0307513_10026790 Ga0307513_100267903 415
96 3300037471 Ga0395905_0017972 Ga0395905_0017972_4504_5886 415
97 3300046616 Ga0495668_0117375 Ga0495668_0117375_41_1402 415
98 3300025295 Ga0209564_1019208 Ga0209564_10192082 416
99 3300037418 Ga0395900_0120500 Ga0395900_0120500_999_2369 416
100 3300037466 Ga0395898_0014151 Ga0395898_0014151_6776_8146 416
101 3300037471 Ga0395905_0041416 Ga0395905_0041416_1564_2934 416
102 3300038443 Ga0395901_0072084 Ga0395901_0072084_2077_3447 416
103 3300050496 nmdc:mga07m45_187_c1 nmdc:mga07m45_187_c1_4845_6242 416
104 3300025304 Ga0209257_1003633 Ga0209257_10036333 417
105 3300025924 Ga0207694_10024886 Ga0207694_100248863 417
106 3300046512 Ga0495610_0007667 Ga0495610_0007667_874_2205 417
107 3300005262 Ga0065165_1001045 Ga0065165_100104514 418
108 3300025295 Ga0209564_1025802 Ga0209564_10258022 418
109 3300028786 Ga0307517_10051162 Ga0307517_100511622 418
110 3300030521 Ga0307511_10006795 Ga0307511_100067953 418
111 3300046616 Ga0495668_0000252 Ga0495668_0000252_58843_60222 418
112 3300047472 Ga0495686_0011771 Ga0495686_0011771_1289_2650 418
113 3300005563 Ga0068855_100008754 Ga0068855_1000087545 419
114 3300005843 Ga0068860_100000151 Ga0068860_10000015111 419
115 3300009093 Ga0105240_10206003 Ga0105240_102060032 419
116 3300025909 Ga0207705_10003547 Ga0207705_100035474 419
117 3300025921 Ga0207652_10009182 Ga0207652_100091825 419
118 3300025932 Ga0207690_10008916 Ga0207690_100089163 419
119 3300025949 Ga0207667_10004915 Ga0207667_100049157 419
120 3300028381 Ga0268264_10000046 Ga0268264_10000046337 419
121 3300053102 Ga0500554_001396 Ga0500554_001396_1669_3012 419
122 iso_pu_bacteria 2843744320 2843747851 419
123 3300005347 Ga0070668_100007707 Ga0070668_1000077072 420
124 3300005355 Ga0070671_100002006 Ga0070671_1000020066 420
125 3300005367 Ga0070667_100001474 Ga0070667_10000147415 420
126 3300005548 Ga0070665_100007216 Ga0070665_10000721610 420
127 3300005617 Ga0068859_100001659 Ga0068859_10000165921 420
128 3300005841 Ga0068863_100002761 Ga0068863_1000027615 420
129 3300005842 Ga0068858_100003765 Ga0068858_1000037654 420
130 3300005843 Ga0068860_100002516 Ga0068860_10000251616 420
131 3300006931 Ga0097620_100001659 Ga0097620_1000016593 420
132 3300009177 Ga0105248_10005462 Ga0105248_100054623 420
133 3300013306 Ga0163162_10012845 Ga0163162_100128452 420
134 3300014325 Ga0163163_10000972 Ga0163163_100009729 420
135 3300014968 Ga0157379_10000578 Ga0157379_1000057810 420
136 3300025931 Ga0207644_10002468 Ga0207644_100024687 420
137 3300025972 Ga0207668_10004159 Ga0207668_100041592 420
138 3300026035 Ga0207703_10003973 Ga0207703_100039737 420
139 3300028379 Ga0268266_10021275 Ga0268266_100212752 420
140 3300028381 Ga0268264_10004778 Ga0268264_100047782 420
141 3300049686 Ga0501257_003287 Ga0501257_003287_1621_2997 420
142 3300005355 Ga0070671_100040383 Ga0070671_1000403832 421
143 3300053108 Ga0500562_000800 Ga0500562_000800_3548_4927 421
144 3300053730 Ga0500645_001168 Ga0500645_001168_9542_10903 421
145 3300009177 Ga0105248_10000335 Ga0105248_1000033517 422
146 3300025941 Ga0207711_10000857 Ga0207711_100008576 422
147 3300046522 Ga0495643_0004585 Ga0495643_0004585_6268_7665 422
148 3300046538 Ga0495609_0012477 Ga0495609_0012477_819_2216 422
149 3300046542 Ga0495597_0000930 Ga0495597_0000930_6215_7612 422
150 3300046616 Ga0495668_0010098 Ga0495668_0010098_2927_4324 422
151 3300046648 Ga0495611_0061964 Ga0495611_0061964_90_1487 422
152 3300048918 Ga0496115_0004093 Ga0496115_0004093_6441_7844 422
153 3300053122 Ga0500608_005430 Ga0500608_005430_3249_4646 422
154 3300053148 Ga0500590_028082 Ga0500590_028082_600_1997 422
155 3300053178 Ga0500637_0029333 Ga0500637_0029333_1519_2916 422
156 3300053735 Ga0500596_005892 Ga0500596_005892_591_1988 422
157 3300005336 Ga0070680_100115213 Ga0070680_1001152132 423
158 3300005616 Ga0068852_100031942 Ga0068852_1000319423 423
159 3300046512 Ga0495610_0014364 Ga0495610_0014364_2774_4171 424
160 3300047469 Ga0495673_0000402 Ga0495673_0000402_35350_36681 424
161 3300053142 Ga0500577_0002936 Ga0500577_0002936_745_2076 424
162 3300046506 Ga0495583_0000037 Ga0495583_0000037_138801_140132 425
163 3300046507 Ga0495606_0011595 Ga0495606_0011595_361_1689 425
164 iso_pu_bacteria 2791355048 2792460548 425
165 iso_pu_bacteria 2849560528 2849560541 425
166 iso_pu_bacteria 2849573788 2849577094 425
167 iso_pu_bacteria 2851153111 2851153730 425
168 iso_pu_bacteria 2898329390 2898329596 425
169 3300005331 Ga0070670_100000037 Ga0070670_10000003728 426
170 3300005331 Ga0070670_100110502 Ga0070670_1001105022 426
171 3300005347 Ga0070668_100001202 Ga0070668_1000012026 426
172 3300005347 Ga0070668_100008467 Ga0070668_1000084672 426
173 3300005367 Ga0070667_100000083 Ga0070667_10000008328 426
174 3300005548 Ga0070665_100001867 Ga0070665_1000018679 426
175 3300005618 Ga0068864_100000116 Ga0068864_10000011638 426
176 3300005719 Ga0068861_100018341 Ga0068861_1000183413 426
177 3300005841 Ga0068863_100000512 Ga0068863_10000051219 426
178 3300005841 Ga0068863_100159174 Ga0068863_1001591742 426
179 3300005842 Ga0068858_100008025 Ga0068858_1000080257 426
180 3300005843 Ga0068860_100000348 Ga0068860_10000034832 426
181 3300005844 Ga0068862_100000235 Ga0068862_10000023537 426
182 3300005844 Ga0068862_100116224 Ga0068862_1001162242 426
183 3300009093 Ga0105240_10313510 Ga0105240_103135102 426
184 3300009553 Ga0105249_10003153 Ga0105249_1000315310 426
185 3300014968 Ga0157379_10018921 Ga0157379_100189212 426
186 3300025925 Ga0207650_10000062 Ga0207650_1000006261 426
187 3300025949 Ga0207667_10112143 Ga0207667_101121432 426
188 3300025961 Ga0207712_10008875 Ga0207712_100088752 426
189 3300025972 Ga0207668_10000130 Ga0207668_1000013016 426
190 3300025972 Ga0207668_10001888 Ga0207668_100018882 426
191 3300025986 Ga0207658_10000218 Ga0207658_1000021844 426
192 3300026035 Ga0207703_10001849 Ga0207703_1000184912 426
193 3300026035 Ga0207703_10011965 Ga0207703_100119654 426
194 3300026067 Ga0207678_10071868 Ga0207678_100718683 426
195 3300026088 Ga0207641_10003277 Ga0207641_100032772 426
196 3300026088 Ga0207641_10137324 Ga0207641_101373242 426
197 3300026095 Ga0207676_10001335 Ga0207676_1000133512 426
198 3300026118 Ga0207675_100012705 Ga0207675_1000127055 426
199 3300028379 Ga0268266_10024193 Ga0268266_100241933 426
200 3300028380 Ga0268265_10000600 Ga0268265_1000060013 426
201 3300028381 Ga0268264_10000059 Ga0268264_10000059280 426
202 iso_pu_bacteria 2643221614 2644085234 426
203 iso_pu_bacteria 2643221661 2644342786 426
204 iso_pu_bacteria 2643221666 2644366086 426
205 3300025913 Ga0207695_10000571 Ga0207695_1000057153 427
206 iso_pu_bacteria 2510917020 2511124117 427
207 iso_pu_bacteria 2582581279 2585149527 427
208 iso_pu_bacteria 2582581293 2585197474 427
209 iso_pu_bacteria 2643221552 2643778590 427
210 iso_pu_bacteria 2643221583 2643924998 427
211 iso_pu_bacteria 2643221584 2643931255 427
212 iso_pu_bacteria 2643221640 2644226232 427
213 iso_pu_bacteria 2643221642 2644235720 427
214 iso_pu_bacteria 2643221691 2644509433 427
215 iso_pu_bacteria 2818991435 2819540350 427
216 iso_pu_bacteria 2818991454 2819649337 427
217 iso_pu_bacteria 2857504554 2857506438 427
218 iso_pu_bacteria 2928531327 2928533596 427
219 3300003781 Ga0055536_1001001 Ga0055536_10010015 428
220 3300025292 Ga0209676_1000476 Ga0209676_100047640 428
221 3300025298 Ga0209050_1000506 Ga0209050_100050640 428
222 3300025304 Ga0209257_1003153 Ga0209257_10031533 428
223 3300046460 Ga0495638_0001908 Ga0495638_0001908_6664_8031 428
224 3300046513 Ga0495616_0000112 Ga0495616_0000112_59388_60755 428
225 3300046519 Ga0495632_0004924 Ga0495632_0004924_7499_8866 428
226 3300053162 Ga0500638_006489 Ga0500638_006489_669_2084 428
227 3300053177 Ga0500636_0027719 Ga0500636_0027719_14_1429 428
228 3300053178 Ga0500637_0019326 Ga0500637_0019326_1921_3336 428
229 3300053731 Ga0500609_000649 Ga0500609_000649_783_2150 428
230 3300003781 Ga0055536_1001303 Ga0055536_10013035 429
231 3300003794 Ga0055531_10001093 Ga0055531_1000109318 429
232 3300003794 Ga0055531_10001770 Ga0055531_1000177011 429
233 3300005331 Ga0070670_100094530 Ga0070670_1000945302 429
234 3300005347 Ga0070668_100101640 Ga0070668_1001016402 429
235 3300005618 Ga0068864_100000363 Ga0068864_10000036313 429
236 3300005841 Ga0068863_100000007 Ga0068863_100000007201 429
237 3300005842 Ga0068858_100000031 Ga0068858_100000031141 429
238 3300010375 Ga0105239_10148945 Ga0105239_101489452 429
239 3300014968 Ga0157379_10040199 Ga0157379_100401992 429
240 3300025292 Ga0209676_1000336 Ga0209676_100033647 429
241 3300025298 Ga0209050_1000843 Ga0209050_100084312 429
242 3300025304 Ga0209257_1000159 Ga0209257_1000159117 429
243 3300025304 Ga0209257_1000865 Ga0209257_100086528 429
244 3300025925 Ga0207650_10079266 Ga0207650_100792662 429
245 3300026035 Ga0207703_10000038 Ga0207703_1000003847 429
246 3300026088 Ga0207641_10000012 Ga0207641_10000012108 429
247 3300026095 Ga0207676_10000179 Ga0207676_1000017929 429
248 3300028379 Ga0268266_10057998 Ga0268266_100579982 429
249 3300028380 Ga0268265_10018834 Ga0268265_100188342 429
250 3300049582 Ga0501048_0042194 Ga0501048_0042194_502_1884 429
251 3300053122 Ga0500608_000026 Ga0500608_000026_7279_8643 429
252 3300025298 Ga0209050_1010582 Ga0209050_10105822 430
253 3300026095 Ga0207676_10016847 Ga0207676_100168473 430
254 3300027378 Ga0209981_1000829 Ga0209981_10008293 430
255 3300031251 Ga0265327_10005679 Ga0265327_100056795 430
256 3300031456 Ga0307513_10000082 Ga0307513_10000082112 430
257 3300031456 Ga0307513_10001884 Ga0307513_1000188425 430
258 3300037312 Ga0395899_0000100 Ga0395899_0000100_70401_71801 430
259 3300037418 Ga0395900_0000009 Ga0395900_0000009_132923_134323 430
260 3300037466 Ga0395898_0015962 Ga0395898_0015962_2720_4120 430
261 3300037471 Ga0395905_0070258 Ga0395905_0070258_1477_2877 430
262 3300038443 Ga0395901_0000014 Ga0395901_0000014_84145_85545 430
263 3300046501 Ga0495607_0082546 Ga0495607_0082546_282_1652 430
264 3300048918 Ga0496115_0189930 Ga0496115_0189930_186_1589 430
265 3300048928 Ga0496125_0031109 Ga0496125_0031109_327_1688 430
266 3300048929 Ga0496126_0000898 Ga0496126_0000898_33366_34727 430
267 3300049581 Ga0501047_0004587 Ga0501047_0004587_4736_6130 430
268 3300053156 Ga0500622_0007105 Ga0500622_0007105_4818_6182 430
269 iso_pu_bacteria 2643221598 2644001833 430
270 3300003316 rootH1_10083338 rootH1_100833383 431
271 3300042156 Ga0439446_0010630 Ga0439446_0010630_958_2310 431
272 3300046524 Ga0495648_0000777 Ga0495648_0000777_26834_28183 431
273 3300053088 Ga0500644_0000692 Ga0500644_0000692_894_2243 431
274 3300053136 Ga0500559_0003182 Ga0500559_0003182_4733_6097 431
275 3300053138 Ga0500564_000017 Ga0500564_000017_8361_9710 431

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00639

Rotamase

PPIC-type PPIASE domain

235

322

0.95

PF00639

Rotamase

PPIC-type PPIASE domain

338

426

0.9

PF13624

SurA_N_3

SurA-like N-terminal domain

66

196

0.87

PF09312

SurA_N

SurA N-terminal domain

74

195

0.85

PF13616

Rotamase_3

PPIC-type PPIASE domain

211

324

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g2p-assembly2.cif.gz_B crystal structure of peptidyl-prolyl cis-trans isomerase domain ii of molecular chaperone sura from salmonella enterica subsp. enterica serovar typhimurium str. 14028s 0.9232 185 286
3kac-assembly2.cif.gz_B structure-guided design of alpha-amino acid-derived pin1 inhibitors 0.9204 188 284
3gpk-assembly2.cif.gz_B crystal structure of ppic-type peptidyl-prolyl cis-trans isomerase domain at 1.55a resolution. 0.9185 184 290
6xd8-assembly2.cif.gz_B crystal structure of peptidylprolyl isomerase (prsa) fragment from bacillus anthracis 0.9158 186 286
3ikd-assembly2.cif.gz_B structure-based design of novel pin1 inhibitors (i) 0.9064 189 284
ID Description Score Start End Superfamily
af_Q8IRJ5_121_236_3.10.50.40 Alpha Beta;Roll;Chitinase A; domain 3; 0.9152 188 282 3.10.50.40
3gpkB00 Alpha Beta;Roll;Chitinase A; domain 3; 0.9048 184 290 3.10.50.40
af_Q4D8F7_4_117_3.10.50.40 Alpha Beta;Roll;Chitinase A; domain 3; 0.8989 188 284 3.10.50.40
af_Q2G2S6_136_245_3.10.50.40 Alpha Beta;Roll;Chitinase A; domain 3; 0.8976 184 284 3.10.50.40
af_C6T9G3_83_177_3.10.50.40 Alpha Beta;Roll;Chitinase A; domain 3; 0.8964 186 286 3.10.50.40
ID Description Score Start End GO Terms
AF-A0A1U9K213-F1-model_v4 peptidylprolyl isomerase (EC 5.2.1.8) 0.9596 186 286 GO:0003755
AF-E1WXP9-F1-model_v4 Peptidyl-prolyl cis-trans isomerase 0.9571 185 284 GO:0003755
AF-I1MN74-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) 0.9413 188 284 GO:0003755
GO:0005634
GO:0005829
GO:0140839
GO:0140840
AF-B9M278-F1-model_v4 Peptidylprolyl cis-trans isomerase, PpiC-type 0.9408 187 286 GO:0003755
AF-G0QBA8-F1-model_v4 Parvulin-like peptidyl-prolyl isomerase 0.938 187 286 GO:0003755

Feature Viewer

pLDDT pTM Quality
81.15 0.51 Medium
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Predicted Structure (AlphaFold2)

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