F380454

General Info

Members Datasets Scaffolds Average Seq Length
275 201 550 335

Family's Representative Sequence

Representative Sequence 3300025254|Ga0209148_1002383|Ga0209148_10023836
Length 375
Sequence LQLSGFSMRSGRKTQKSSLKEDAGLTGRSRQALTAEPAAVNPATQPLGQFPRIRLRRNRAVDWSRRMVAENRLGPQDFILPAFVKEGGAKREAIPAMPGVYRHTIPSLIELATRAAELGIPALALFPVVPLERKSTAAEEAFRADNLCNRAVAALKKAVPEMGLICDVALDPYTDHGHDGLMQGGVIVNDETVDVLIRQALAQADAGVDIVAPSDMMDGRVGRIRDALDAAGYQRVQIMSYAAKYASGFYGPFREAVGSKSALGKGDKRTYQMDPANGDEAIRECALDVAEGADMLMVKPGLPYLDILHRVKQEFRMPVFAYQVSGEYSMVKAAAANGWLDNNRVVLESLLCFKRAGADGILTYSAIEAAELLSE

Samples

Sample ID Description Type Environment
1 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
127 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
132 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
133 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
134 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
137 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
143 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
144 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
145 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
146 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
147 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
148 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
149 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
150 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
151 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
182 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
183 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
184 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
185 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
186 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
187 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
188 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
189 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
190 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
191 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
192 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
193 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
194 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
195 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
196 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
197 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
198 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
199 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
200 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
201 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.09
Metatranscriptomes 1.09
Isolates 1.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.45
Nodule 0.36
Rhizoplane 3.64
Rhizosphere 83.27
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209148_1002383 3300025254 Bacteria 6591
2 JGI24736J21556_1005352 3300001904 Bacteria 2169
3 Ga0007409J51694_1028074 3300003575 Bacteria 2009
4 Ga0065165_1001236 3300005262 Bacteria 29209
5 Ga0070676_10004955 3300005328 Bacteria 7048
6 Ga0070670_100003976 3300005331 Bacteria 12342
7 Ga0070666_10221774 3300005335 Bacteria 1334
8 Ga0070680_100006245 3300005336 Bacteria 9041
9 Ga0070660_100004401 3300005339 Bacteria 9735
10 Ga0070660_100062616 3300005339 Bacteria 2891
11 Ga0070689_100066854 3300005340 Bacteria 2801
12 Ga0070661_100002630 3300005344 Bacteria 12289
13 Ga0070668_100003794 3300005347 Bacteria 11167
14 Ga0070669_100009317 3300005353 Bacteria 6990
15 Ga0070669_100025290 3300005353 Bacteria 4264
16 Ga0070671_100000153 3300005355 Bacteria 45037
17 Ga0070671_100016559 3300005355 Bacteria 5960
18 Ga0070671_100102737 3300005355 Bacteria 2398
19 Ga0070659_100010089 3300005366 Bacteria 6953
20 Ga0070667_100008019 3300005367 Bacteria 8760
21 Ga0070667_100047031 3300005367 Bacteria 3630
22 Ga0070694_100264343 3300005444 Bacteria 1306
23 Ga0070708_100000773 3300005445 Bacteria 24034
24 Ga0070663_100050393 3300005455 Bacteria 2961
25 Ga0070662_100001027 3300005457 Bacteria 17072
26 Ga0068867_100005934 3300005459 Bacteria 8663
27 Ga0070685_10003188 3300005466 Bacteria 8348
28 Ga0070672_100008441 3300005543 Bacteria 7043
29 Ga0070665_100031162 3300005548 Bacteria 5367
30 Ga0070665_100158673 3300005548 Bacteria 2263
31 Ga0070704_100028559 3300005549 Bacteria 3713
32 Ga0068855_100007599 3300005563 Bacteria 13117
33 Ga0068855_100179796 3300005563 Bacteria 2392
34 Ga0068855_100323929 3300005563 Bacteria 1703
35 Ga0070664_100012737 3300005564 Bacteria 6843
36 Ga0070664_100080701 3300005564 Bacteria 2802
37 Ga0068856_100003250 3300005614 Bacteria 16544
38 Ga0068856_100277416 3300005614 Bacteria 1693
39 Ga0068852_100157989 3300005616 Bacteria 2114
40 Ga0068859_100015901 3300005617 Bacteria 7563
41 Ga0068859_100100481 3300005617 Bacteria 2948
42 Ga0068864_100000113 3300005618 Bacteria 79654
43 Ga0068864_100022321 3300005618 Bacteria 5306
44 Ga0068861_100138877 3300005719 Bacteria 1981
45 Ga0068863_100000036 3300005841 Bacteria 164593
46 Ga0068863_100006128 3300005841 Bacteria 11793
47 Ga0068863_100483904 3300005841 Bacteria 1217
48 Ga0068858_100000030 3300005842 Bacteria 144357
49 Ga0068858_100000038 3300005842 Bacteria 137131
50 Ga0068858_100015350 3300005842 Bacteria 7204
51 Ga0068858_100040634 3300005842 Bacteria 4314
52 Ga0068860_100011950 3300005843 Bacteria 8557
53 Ga0068862_100068435 3300005844 Bacteria 3063
54 Ga0068862_100075694 3300005844 Bacteria 2912
55 Ga0070717_10127722 3300006028 Bacteria 2184
56 Ga0075368_10001066 3300006042 Bacteria 8585
57 Ga0075364_10002360 3300006051 Bacteria 10606
58 Ga0075367_10006947 3300006178 Bacteria 5764
59 Ga0075366_10022597 3300006195 Bacteria 3660
60 Ga0097621_100005813 3300006237 Bacteria 8712
61 Ga0068871_100196859 3300006358 Bacteria 1738
62 Ga0075430_100014793 3300006846 Bacteria 6645
63 Ga0075434_100179341 3300006871 Bacteria 2138
64 Ga0068865_100011727 3300006881 Bacteria 5490
65 Ga0097620_100015900 3300006931 Bacteria 7563
66 Ga0097620_100100475 3300006931 Bacteria 2948
67 Ga0079104_1032532 3300006946 Bacteria 1284
68 Ga0105240_10238589 3300009093 Bacteria 2109
69 Ga0105240_10355453 3300009093 Bacteria 1661
70 Ga0105240_10630221 3300009093 Bacteria 1177
71 Ga0111539_10005683 3300009094 Bacteria 16139
72 Ga0114129_10439750 3300009147 Bacteria 1712
73 Ga0105248_10002814 3300009177 Bacteria 19315
74 Ga0105248_10021876 3300009177 Bacteria 7086
75 Ga0105248_10061911 3300009177 Bacteria 4202
76 Ga0105237_10101506 3300009545 Bacteria 2869
77 Ga0105238_10011924 3300009551 Bacteria 8758
78 Ga0105238_10022841 3300009551 Bacteria 6376
79 Ga0105238_10200148 3300009551 Bacteria 1973
80 Ga0105249_10114170 3300009553 Bacteria 2557
81 Ga0105239_10290100 3300010375 Bacteria 1842
82 Ga0105239_10498188 3300010375 Bacteria 1385
83 Ga0157373_10001349 3300013100 Bacteria 18818
84 Ga0157373_10006647 3300013100 Bacteria 8614
85 Ga0157371_10000787 3300013102 Bacteria 36521
86 Ga0157370_10019674 3300013104 Bacteria 6761
87 Ga0157369_10035968 3300013105 Bacteria 5428
88 Ga0157369_10277862 3300013105 Bacteria 1744
89 Ga0157374_10001837 3300013296 Bacteria 17870
90 Ga0163162_10068158 3300013306 Bacteria 3609
91 Ga0163162_10613492 3300013306 Bacteria 1213
92 Ga0157372_10009210 3300013307 Bacteria 10496
93 Ga0157372_10414410 3300013307 Bacteria 1570
94 Ga0157375_10040653 3300013308 Bacteria 4484
95 Ga0163163_10000698 3300014325 Bacteria 28545
96 Ga0157380_10020902 3300014326 Bacteria 4902
97 Ga0157379_10000956 3300014968 Bacteria 23412
98 Ga0157379_10072159 3300014968 Bacteria 3089
99 Ga0213876_10000186 3300021384 Bacteria 64451
100 Ga0209233_1030596 3300025261 Bacteria 1267
101 Ga0209455_1000236 3300025272 Bacteria 69542
102 Ga0207682_10043997 3300025893 Bacteria 1829
103 Ga0207645_10000287 3300025907 Bacteria 42109
104 Ga0207645_10034110 3300025907 Bacteria 3270
105 Ga0207707_10025545 3300025912 Bacteria 5167
106 Ga0207695_10156815 3300025913 Bacteria 2211
107 Ga0207671_10062193 3300025914 Bacteria 2772
108 Ga0207671_10135896 3300025914 Bacteria 1890
109 Ga0207657_10004559 3300025919 Bacteria 14648
110 Ga0207657_10012555 3300025919 Bacteria 8354
111 Ga0207657_10094340 3300025919 Bacteria 2492
112 Ga0207649_10005560 3300025920 Bacteria 6816
113 Ga0207681_10020389 3300025923 Bacteria 4200
114 Ga0207694_10000735 3300025924 Bacteria 29452
115 Ga0207650_10005148 3300025925 Bacteria 8925
116 Ga0207687_10006904 3300025927 Bacteria 7480
117 Ga0207644_10009310 3300025931 Bacteria 6447
118 Ga0207644_10026310 3300025931 Bacteria 4007
119 Ga0207644_10104787 3300025931 Bacteria 2130
120 Ga0207690_10000485 3300025932 Bacteria 25649
121 Ga0207706_10000023 3300025933 Bacteria 153979
122 Ga0207691_10001041 3300025940 Bacteria 27487
123 Ga0207691_10096075 3300025940 Bacteria 2649
124 Ga0207711_10064794 3300025941 Bacteria 3157
125 Ga0207689_10059870 3300025942 Bacteria 3132
126 Ga0207679_10007168 3300025945 Bacteria 7061
127 Ga0207667_10004129 3300025949 Bacteria 17847
128 Ga0207667_10206190 3300025949 Bacteria 2016
129 Ga0207667_10471551 3300025949 Bacteria 1275
130 Ga0207651_10002917 3300025960 Bacteria 8262
131 Ga0207651_10067933 3300025960 Bacteria 2510
132 Ga0207712_10076846 3300025961 Bacteria 2418
133 Ga0207668_10006869 3300025972 Bacteria 6751
134 Ga0207668_10107185 3300025972 Bacteria 2089
135 Ga0207640_10004855 3300025981 Bacteria 7301
136 Ga0207658_10031432 3300025986 Bacteria 3769
137 Ga0207658_10044446 3300025986 Bacteria 3234
138 Ga0207703_10000037 3300026035 Bacteria 176167
139 Ga0207703_10013368 3300026035 Bacteria 6397
140 Ga0207639_10002492 3300026041 Bacteria 12339
141 Ga0207678_10048598 3300026067 Bacteria 3667
142 Ga0207702_10000523 3300026078 Bacteria 43069
143 Ga0207702_10128228 3300026078 Bacteria 2280
144 Ga0207641_10000055 3300026088 Bacteria 170796
145 Ga0207641_10001659 3300026088 Bacteria 21728
146 Ga0207648_10000048 3300026089 Bacteria 109946
147 Ga0207676_10000120 3300026095 Bacteria 69298
148 Ga0207676_10496465 3300026095 Bacteria 1158
149 Ga0207675_100083219 3300026118 Bacteria 3001
150 Ga0207683_10000258 3300026121 Bacteria 47224
151 Ga0209999_1010873 3300027543 Bacteria 1645
152 Ga0209983_1001514 3300027665 Bacteria 5159
153 Ga0209971_1016639 3300027682 Bacteria 1744
154 Ga0207428_10000078 3300027907 Bacteria 136571
155 Ga0207428_10129764 3300027907 Bacteria 1929
156 Ga0268266_10006912 3300028379 Bacteria 10322
157 Ga0268266_10034481 3300028379 Bacteria 4305
158 Ga0268264_10009800 3300028381 Bacteria 7929
159 Ga0265338_10252312 3300028800 Bacteria 1301
160 Ga0265760_10004137 3300031090 Bacteria 4180
161 Ga0265760_10013034 3300031090 Bacteria 2380
162 Ga0265327_10000166 3300031251 Bacteria 141539
163 Ga0265327_10030996 3300031251 Bacteria 3012
164 Ga0307408_100002636 3300031548 Bacteria 12470
165 Ga0307408_100087799 3300031548 Bacteria 2341
166 Ga0307408_100409679 3300031548 Bacteria 1166
167 Ga0265342_10093901 3300031712 Bacteria 1717
168 Ga0316578_10217877 3300031728 Bacteria 1148
169 Ga0307405_10000854 3300031731 Bacteria 12026
170 Ga0307405_10140291 3300031731 Bacteria 1684
171 Ga0307413_10000935 3300031824 Bacteria 10416
172 Ga0307413_10076472 3300031824 Bacteria 2128
173 Ga0307410_10005526 3300031852 Bacteria 6701
174 Ga0307406_10131468 3300031901 Bacteria 1758
175 Ga0307407_10003963 3300031903 Bacteria 6185
176 Ga0307412_10007471 3300031911 Bacteria 6200
177 Ga0307412_10010411 3300031911 Bacteria 5355
178 Ga0307409_100000380 3300031995 Bacteria 18816
179 Ga0307416_100005560 3300032002 Bacteria 7760
180 Ga0307416_100022239 3300032002 Bacteria 4573
181 Ga0307416_100175491 3300032002 Bacteria 2001
182 Ga0307414_10002583 3300032004 Bacteria 9532
183 Ga0307411_10000235 3300032005 Bacteria 18066
184 Ga0373936_0027032 3300035113 Bacteria 2250
185 Ga0373957_0011064 3300035120 Bacteria 3001
186 Ga0373947_0022400 3300035725 Bacteria 3664
187 Ga0373937_0096461 3300036401 Bacteria 2743
188 Ga0373925_0022971 3300037068 Bacteria 4551
189 Ga0395899_0043112 3300037312 Bacteria 3366
190 Ga0395900_0055972 3300037418 Bacteria 4060
191 Ga0395905_0000172 3300037471 Bacteria 105228
192 Ga0436364_0369674 3300037853 Bacteria 1512
193 Ga0436365_1109436 3300039437 Bacteria 1676
194 Ga0436365_1884511 3300039437 Bacteria 98004
195 Ga0436363_0338855 3300039450 Bacteria 1890
196 Ga0450890_006780 3300042127 Bacteria 1462
197 Ga0451577_0054781 3300042876 Bacteria 3560
198 Ga0453683_0181944 3300044673 Bacteria 1333
199 Ga0453683_0231170 3300044673 Bacteria 1177
200 Ga0453684_0097804 3300044712 Bacteria 3601
201 Ga0451576_0019834 3300045051 Bacteria 7332
202 Ga0451576_0264718 3300045051 Bacteria 1797
203 Ga0495629_0006669 3300046459 Bacteria 8546
204 Ga0495650_0047319 3300046471 Bacteria 1800
205 Ga0495585_0147599 3300046492 Bacteria 1228
206 Ga0495607_0115668 3300046501 Bacteria 1415
207 Ga0495583_0007341 3300046506 Bacteria 6949
208 Ga0495608_0135504 3300046511 Bacteria 1574
209 Ga0495620_0035356 3300046515 Bacteria 2247
210 Ga0495643_0025229 3300046522 Bacteria 3365
211 Ga0495597_0011135 3300046542 Bacteria 4366
212 Ga0495622_0006546 3300046557 Bacteria 5403
213 Ga0495625_0011422 3300046660 Bacteria 7241
214 Ga0495669_0000001 3300046684 Bacteria 291866
215 Ga0496102_0030456 3300048905 Bacteria 4830
216 Ga0496103_0021355 3300048906 Bacteria 3894
217 Ga0496104_0108121 3300048907 Bacteria 2665
218 Ga0496106_0002076 3300048909 Bacteria 15006
219 Ga0496106_0060195 3300048909 Bacteria 2878
220 Ga0496107_0019780 3300048910 Bacteria 4753
221 Ga0496108_0205569 3300048911 Bacteria 1709
222 Ga0496109_0363688 3300048912 Bacteria 1367
223 Ga0496110_0410595 3300048913 Bacteria 1234
224 Ga0496113_0006948 3300048916 Bacteria 7232
225 Ga0501031_0024704 3300049568 Bacteria 3917
226 Ga0501031_0159497 3300049568 Bacteria 1474
227 Ga0501032_0111921 3300049569 Bacteria 1806
228 Ga0501033_0029102 3300049570 Bacteria 4151
229 Ga0501033_0042225 3300049570 Bacteria 3400
230 Ga0501036_0011216 3300049572 Bacteria 7415
231 Ga0501037_0016559 3300049573 Bacteria 5426
232 Ga0501038_0004972 3300049574 Bacteria 12353
233 Ga0501038_0119504 3300049574 Bacteria 2175
234 Ga0501039_0004303 3300049575 Bacteria 10738
235 Ga0501043_0004247 3300049579 Bacteria 11680
236 Ga0501043_0014383 3300049579 Bacteria 6195
237 Ga0501043_0110055 3300049579 Bacteria 2163
238 Ga0501048_0100142 3300049582 Bacteria 2044
239 Ga0501067_0006156 3300049583 Bacteria 6651
240 Ga0501068_0002795 3300049584 Bacteria 9284
241 Ga0501070_0003248 3300049586 Bacteria 14125
242 Ga0501070_0063921 3300049586 Bacteria 3048
243 Ga0501035_0000024 3300049822 Bacteria 206692
244 Ga0501035_0000087 3300049822 Bacteria 115716
245 Ga0501035_0029911 3300049822 Bacteria 4967
246 Ga0501044_0003658 3300049823 Bacteria 17296
247 nmdc:mga00v17_2041_c1 3300050491 Bacteria 10398
248 nmdc:mga08y16_157177_c1 3300050511 Bacteria 2363
249 nmdc:mga08y16_66_c1 3300050511 Bacteria 87732
250 nmdc:mga0n895_30781_c1 3300050512 Bacteria 5132
251 nmdc:mga0a205_119881_c1 3300050515 Bacteria 2530
252 nmdc:mga0sz30_43245_c1 3300050516 Bacteria 1896
253 Ga0495601_0190526 3300053077 Bacteria 1340
254 Ga0500635_0000042 3300053080 Bacteria 90313
255 Ga0500643_018692 3300053087 Unclassified 2295
256 Ga0500566_0004390 3300053094 Bacteria 8420
257 Ga0500555_000003 3300053103 Bacteria 392994
258 Ga0500555_031270 3300053103 Bacteria 1508
259 Ga0500569_005154 3300053109 Bacteria 2796
260 Ga0500595_012454 3300053119 Bacteria 3291
261 Ga0500595_015542 3300053119 Bacteria 2854
262 Ga0500608_001039 3300053122 Bacteria 9934
263 Ga0500614_003339 3300053123 Bacteria 3463
264 Ga0500642_0018617 3300053130 Bacteria 2691
265 Ga0500642_0158098 3300053130 Bacteria 1063
266 Ga0500658_0116629 3300053134 Bacteria 1180
267 Ga0500616_0068484 3300053153 Bacteria 1818
268 Ga0500636_0013333 3300053177 Bacteria 4826
269 Ga0500601_003653 3300053737 Bacteria 1669
270 Ga0501084_0012852 3300054114 Bacteria 6936
271 2644085063 2643221614 Bacteria 4260023
272 2644342615 2643221661 Bacteria 4267604
273 2644365915 2643221666 Bacteria 4265935
274 2729906766 2728369276 Bacteria 5610032
275 2753765122 2751185897 Bacteria 5322941
276 Ga0209148_1002383
277 JGI24736J21556_1005352
278 Ga0007409J51694_1028074
279 Ga0065165_1001236
280 Ga0070676_10004955
281 Ga0070670_100003976
282 Ga0070666_10221774
283 Ga0070680_100006245
284 Ga0070660_100004401
285 Ga0070660_100062616
286 Ga0070689_100066854
287 Ga0070661_100002630
288 Ga0070668_100003794
289 Ga0070669_100009317
290 Ga0070669_100025290
291 Ga0070671_100000153
292 Ga0070671_100016559
293 Ga0070671_100102737
294 Ga0070659_100010089
295 Ga0070667_100008019
296 Ga0070667_100047031
297 Ga0070694_100264343
298 Ga0070708_100000773
299 Ga0070663_100050393
300 Ga0070662_100001027
301 Ga0068867_100005934
302 Ga0070685_10003188
303 Ga0070672_100008441
304 Ga0070665_100031162
305 Ga0070665_100158673
306 Ga0070704_100028559
307 Ga0068855_100007599
308 Ga0068855_100179796
309 Ga0068855_100323929
310 Ga0070664_100012737
311 Ga0070664_100080701
312 Ga0068856_100003250
313 Ga0068856_100277416
314 Ga0068852_100157989
315 Ga0068859_100015901
316 Ga0068859_100100481
317 Ga0068864_100000113
318 Ga0068864_100022321
319 Ga0068861_100138877
320 Ga0068863_100000036
321 Ga0068863_100006128
322 Ga0068863_100483904
323 Ga0068858_100000030
324 Ga0068858_100000038
325 Ga0068858_100015350
326 Ga0068858_100040634
327 Ga0068860_100011950
328 Ga0068862_100068435
329 Ga0068862_100075694
330 Ga0070717_10127722
331 Ga0075368_10001066
332 Ga0075364_10002360
333 Ga0075367_10006947
334 Ga0075366_10022597
335 Ga0097621_100005813
336 Ga0068871_100196859
337 Ga0075430_100014793
338 Ga0075434_100179341
339 Ga0068865_100011727
340 Ga0097620_100015900
341 Ga0097620_100100475
342 Ga0079104_1032532
343 Ga0105240_10238589
344 Ga0105240_10355453
345 Ga0105240_10630221
346 Ga0111539_10005683
347 Ga0114129_10439750
348 Ga0105248_10002814
349 Ga0105248_10021876
350 Ga0105248_10061911
351 Ga0105237_10101506
352 Ga0105238_10011924
353 Ga0105238_10022841
354 Ga0105238_10200148
355 Ga0105249_10114170
356 Ga0105239_10290100
357 Ga0105239_10498188
358 Ga0157373_10001349
359 Ga0157373_10006647
360 Ga0157371_10000787
361 Ga0157370_10019674
362 Ga0157369_10035968
363 Ga0157369_10277862
364 Ga0157374_10001837
365 Ga0163162_10068158
366 Ga0163162_10613492
367 Ga0157372_10009210
368 Ga0157372_10414410
369 Ga0157375_10040653
370 Ga0163163_10000698
371 Ga0157380_10020902
372 Ga0157379_10000956
373 Ga0157379_10072159
374 Ga0213876_10000186
375 Ga0209233_1030596
376 Ga0209455_1000236
377 Ga0207682_10043997
378 Ga0207645_10000287
379 Ga0207645_10034110
380 Ga0207707_10025545
381 Ga0207695_10156815
382 Ga0207671_10062193
383 Ga0207671_10135896
384 Ga0207657_10004559
385 Ga0207657_10012555
386 Ga0207657_10094340
387 Ga0207649_10005560
388 Ga0207681_10020389
389 Ga0207694_10000735
390 Ga0207650_10005148
391 Ga0207687_10006904
392 Ga0207644_10009310
393 Ga0207644_10026310
394 Ga0207644_10104787
395 Ga0207690_10000485
396 Ga0207706_10000023
397 Ga0207691_10001041
398 Ga0207691_10096075
399 Ga0207711_10064794
400 Ga0207689_10059870
401 Ga0207679_10007168
402 Ga0207667_10004129
403 Ga0207667_10206190
404 Ga0207667_10471551
405 Ga0207651_10002917
406 Ga0207651_10067933
407 Ga0207712_10076846
408 Ga0207668_10006869
409 Ga0207668_10107185
410 Ga0207640_10004855
411 Ga0207658_10031432
412 Ga0207658_10044446
413 Ga0207703_10000037
414 Ga0207703_10013368
415 Ga0207639_10002492
416 Ga0207678_10048598
417 Ga0207702_10000523
418 Ga0207702_10128228
419 Ga0207641_10000055
420 Ga0207641_10001659
421 Ga0207648_10000048
422 Ga0207676_10000120
423 Ga0207676_10496465
424 Ga0207675_100083219
425 Ga0207683_10000258
426 Ga0209999_1010873
427 Ga0209983_1001514
428 Ga0209971_1016639
429 Ga0207428_10000078
430 Ga0207428_10129764
431 Ga0268266_10006912
432 Ga0268266_10034481
433 Ga0268264_10009800
434 Ga0265338_10252312
435 Ga0265760_10004137
436 Ga0265760_10013034
437 Ga0265327_10000166
438 Ga0265327_10030996
439 Ga0307408_100002636
440 Ga0307408_100087799
441 Ga0307408_100409679
442 Ga0265342_10093901
443 Ga0316578_10217877
444 Ga0307405_10000854
445 Ga0307405_10140291
446 Ga0307413_10000935
447 Ga0307413_10076472
448 Ga0307410_10005526
449 Ga0307406_10131468
450 Ga0307407_10003963
451 Ga0307412_10007471
452 Ga0307412_10010411
453 Ga0307409_100000380
454 Ga0307416_100005560
455 Ga0307416_100022239
456 Ga0307416_100175491
457 Ga0307414_10002583
458 Ga0307411_10000235
459 Ga0373936_0027032
460 Ga0373957_0011064
461 Ga0373947_0022400
462 Ga0373937_0096461
463 Ga0373925_0022971
464 Ga0395899_0043112
465 Ga0395900_0055972
466 Ga0395905_0000172
467 Ga0436364_0369674
468 Ga0436365_1109436
469 Ga0436365_1884511
470 Ga0436363_0338855
471 Ga0450890_006780
472 Ga0451577_0054781
473 Ga0453683_0181944
474 Ga0453683_0231170
475 Ga0453684_0097804
476 Ga0451576_0019834
477 Ga0451576_0264718
478 Ga0495629_0006669
479 Ga0495650_0047319
480 Ga0495585_0147599
481 Ga0495607_0115668
482 Ga0495583_0007341
483 Ga0495608_0135504
484 Ga0495620_0035356
485 Ga0495643_0025229
486 Ga0495597_0011135
487 Ga0495622_0006546
488 Ga0495625_0011422
489 Ga0495669_0000001
490 Ga0496102_0030456
491 Ga0496103_0021355
492 Ga0496104_0108121
493 Ga0496106_0002076
494 Ga0496106_0060195
495 Ga0496107_0019780
496 Ga0496108_0205569
497 Ga0496109_0363688
498 Ga0496110_0410595
499 Ga0496113_0006948
500 Ga0501031_0024704
501 Ga0501031_0159497
502 Ga0501032_0111921
503 Ga0501033_0029102
504 Ga0501033_0042225
505 Ga0501036_0011216
506 Ga0501037_0016559
507 Ga0501038_0004972
508 Ga0501038_0119504
509 Ga0501039_0004303
510 Ga0501043_0004247
511 Ga0501043_0014383
512 Ga0501043_0110055
513 Ga0501048_0100142
514 Ga0501067_0006156
515 Ga0501068_0002795
516 Ga0501070_0003248
517 Ga0501070_0063921
518 Ga0501035_0000024
519 Ga0501035_0000087
520 Ga0501035_0029911
521 Ga0501044_0003658
522 nmdc:mga00v17_2041_c1
523 nmdc:mga08y16_157177_c1
524 nmdc:mga08y16_66_c1
525 nmdc:mga0n895_30781_c1
526 nmdc:mga0a205_119881_c1
527 nmdc:mga0sz30_43245_c1
528 Ga0495601_0190526
529 Ga0500635_0000042
530 Ga0500643_018692
531 Ga0500566_0004390
532 Ga0500555_000003
533 Ga0500555_031270
534 Ga0500569_005154
535 Ga0500595_012454
536 Ga0500595_015542
537 Ga0500608_001039
538 Ga0500614_003339
539 Ga0500642_0018617
540 Ga0500642_0158098
541 Ga0500658_0116629
542 Ga0500616_0068484
543 Ga0500636_0013333
544 Ga0500601_003653
545 Ga0501084_0012852
546 2644085063
547 2644342615
548 2644365915
549 2729906766
550 2753765122

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00490

ALAD

Delta-aminolevulinic acid dehydratase

52

372

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w56-assembly1.cif.gz_A stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d131c) 0.9924 3 328
1w54-assembly1.cif.gz_A stepwise introduction of a zinc binding site into porphobilinogen synthase from pseudomonas aeruginosa (mutation d139c) 0.9923 6 328
1w54-assembly1.cif.gz_B stepwise introduction of a zinc binding site into porphobilinogen synthase from pseudomonas aeruginosa (mutation d139c) 0.99 3 328
1w5m-assembly1.cif.gz_B stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d139c) 0.9897 1 328
1gzg-assembly1.cif.gz_A complex of a mg2-dependent porphobilinogen synthase from pseudomonas aeruginosa (mutant d139n) with 5-fluorolevulinic acid 0.989 1 328
ID Description Score Start End Superfamily
2c19A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9879 1 328 3.20.20.70
af_P9WMP5_2_329_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9847 3 327 3.20.20.70
af_Q60178_5_334_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9771 3 325 3.20.20.70
af_I1KAC1_73_398_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9736 1 332 3.20.20.70
1i8jA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9713 3 328 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A539DP19-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9993 170 329 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A7C5PDP2-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9987 95 328 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A340XQS9-F1-model_v4 deleted 0.9983 50 277
AF-A0A7S1E6N9-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9983 163 317 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A832Q7L0-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9981 30 328 GO:0004655
GO:0005829
GO:0006782
GO:0008270

Map