F380443

General Info

Members Datasets Scaffolds Average Seq Length
275 188 550 116

Family's Representative Sequence

Representative Sequence 3300014969|Ga0157376_11285966|Ga0157376_112859662
Length 137
Sequence MSVSNTGLVYALTGIYNVAYTKNVASVFEIVAEPNRRAILSLLVSSEQSVGDIVRQLGLSQPAVSKHLRVLREAGFVESTADAQRRVYRLRPGPLQELDAWLAQFRQFWSAHVDALERHLDRMNQPTRTKKKTRRRR

Samples

Sample ID Description Type Environment
1 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
71 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300031018 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
106 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
107 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
108 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
110 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
119 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
120 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
121 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
124 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
130 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
131 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
143 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
172 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
173 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
174 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
175 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
184 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.27
Metatranscriptomes 0.73
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 0.73
Rhizosphere 95.27
Stem 0
Stem Tuber 0
Unclassified 14.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157376_11285966 3300014969 Unclassified 761
2 rootH1_10252507 3300003323 Bacteria 2218
3 JGI25405J52794_10042665 3300003911 Bacteria 961
4 Ga0065712_10007991 3300005290 Bacteria 2894
5 Ga0065715_10006469 3300005293 Bacteria 4518
6 Ga0070676_10246927 3300005328 Unclassified 1189
7 Ga0068869_100222080 3300005334 Bacteria 1498
8 Ga0070689_101364115 3300005340 Bacteria 640
9 Ga0070675_100409699 3300005354 Bacteria 1210
10 Ga0070675_100575660 3300005354 Bacteria 1020
11 Ga0070674_100119282 3300005356 Bacteria 1951
12 Ga0070674_100346630 3300005356 Unclassified 1198
13 Ga0070673_100174867 3300005364 Bacteria 1834
14 Ga0070673_100495150 3300005364 Bacteria 1105
15 Ga0070667_100553106 3300005367 Bacteria 1058
16 Ga0070709_10097879 3300005434 Bacteria 1948
17 Ga0070714_100319133 3300005435 Bacteria 1452
18 Ga0070713_100052776 3300005436 Bacteria 3367
19 Ga0070710_11417184 3300005437 Bacteria 520
20 Ga0070711_101506893 3300005439 Bacteria 587
21 Ga0070694_101455438 3300005444 Bacteria 579
22 Ga0070708_100265037 3300005445 Bacteria 1615
23 Ga0070663_101468434 3300005455 Unclassified 605
24 Ga0070681_10006263 3300005458 Bacteria 11576
25 Ga0070681_10313251 3300005458 Bacteria 1479
26 Ga0068867_100051100 3300005459 Bacteria 3048
27 Ga0070707_100694287 3300005468 Bacteria 980
28 Ga0070707_100701529 3300005468 Bacteria 975
29 Ga0070698_100515087 3300005471 Bacteria 1134
30 Ga0070699_100331543 3300005518 Bacteria 1369
31 Ga0070679_100245256 3300005530 Bacteria 1748
32 Ga0070672_100982646 3300005543 Bacteria 748
33 Ga0070693_100137615 3300005547 Bacteria 1533
34 Ga0070693_100670587 3300005547 Unclassified 756
35 Ga0070665_101228226 3300005548 Bacteria 760
36 Ga0070665_101535549 3300005548 Bacteria 674
37 Ga0070704_100068971 3300005549 Bacteria 2560
38 Ga0070704_100443214 3300005549 Bacteria 1117
39 Ga0068855_100725544 3300005563 Unclassified 1062
40 Ga0068857_101862156 3300005577 Bacteria 589
41 Ga0068856_100728003 3300005614 Bacteria 1012
42 Ga0068856_102120710 3300005614 Unclassified 572
43 Ga0070702_100059434 3300005615 Unclassified 2218
44 Ga0068852_100147782 3300005616 Bacteria 2182
45 Ga0068859_100079690 3300005617 Bacteria 3315
46 Ga0068859_100411683 3300005617 Bacteria 1448
47 Ga0068861_100634422 3300005719 Bacteria 985
48 Ga0068858_100265097 3300005842 Bacteria 1634
49 Ga0068860_100156856 3300005843 Bacteria 2194
50 Ga0068860_102218039 3300005843 Unclassified 570
51 Ga0081455_10014089 3300005937 Bacteria 7858
52 Ga0081455_10399648 3300005937 Bacteria 954
53 Ga0081455_10409688 3300005937 Bacteria 938
54 Ga0097621_100142417 3300006237 Bacteria 2049
55 Ga0068871_100000554 3300006358 Bacteria 25473
56 Ga0075428_100681109 3300006844 Bacteria 1096
57 Ga0075430_100798654 3300006846 Bacteria 778
58 Ga0075434_100001078 3300006871 Bacteria 22324
59 Ga0075434_100088113 3300006871 Bacteria 3105
60 Ga0075434_100197921 3300006871 Bacteria 2029
61 Ga0075434_100392080 3300006871 Bacteria 1409
62 Ga0075434_100675283 3300006871 Bacteria 1051
63 Ga0075429_100128590 3300006880 Bacteria 2216
64 Ga0075429_100250639 3300006880 Bacteria 1550
65 Ga0075429_100582029 3300006880 Bacteria 981
66 Ga0075436_100001235 3300006914 Bacteria 17363
67 Ga0075436_100932569 3300006914 Bacteria 650
68 Ga0097620_100079687 3300006931 Bacteria 3315
69 Ga0097620_100411719 3300006931 Bacteria 1448
70 Ga0075435_100000255 3300007076 Bacteria 33098
71 Ga0075435_100046864 3300007076 Bacteria 3469
72 Ga0075435_100495561 3300007076 Bacteria 1056
73 Ga0105250_10247381 3300009092 Bacteria 761
74 Ga0105240_10000499 3300009093 Bacteria 72315
75 Ga0111539_11192747 3300009094 Bacteria 884
76 Ga0111539_12760506 3300009094 Unclassified 569
77 Ga0105247_10000182 3300009101 Bacteria 61009
78 Ga0114129_10175909 3300009147 Bacteria 2915
79 Ga0105241_10000207 3300009174 Bacteria 44168
80 Ga0105241_10323715 3300009174 Unclassified 1330
81 Ga0105241_11160436 3300009174 Unclassified 730
82 Ga0105242_10115613 3300009176 Unclassified 2294
83 Ga0105248_12494806 3300009177 Unclassified 589
84 Ga0105237_10001188 3300009545 Bacteria 34842
85 Ga0105238_10464299 3300009551 Unclassified 1264
86 Ga0105249_11119473 3300009553 Unclassified 858
87 Ga0105239_10351370 3300010375 Unclassified 1665
88 Ga0105239_11758666 3300010375 Bacteria 718
89 Ga0105246_11648544 3300011119 Bacteria 608
90 Ga0157371_11411089 3300013102 Bacteria 541
91 Ga0157378_10019797 3300013297 Bacteria 5919
92 Ga0157378_11605447 3300013297 Bacteria 696
93 Ga0163162_12589135 3300013306 Bacteria 584
94 Ga0163162_13405096 3300013306 Bacteria 507
95 Ga0157375_10004841 3300013308 Bacteria 11697
96 Ga0163163_10445072 3300014325 Bacteria 1355
97 Ga0157380_12568826 3300014326 Bacteria 575
98 Ga0157379_10237822 3300014968 Unclassified 1652
99 Ga0157376_10014953 3300014969 Bacteria 5848
100 Ga0157376_10482028 3300014969 Bacteria 1215
101 Ga0157376_10828594 3300014969 Bacteria 939
102 Ga0182006_1322804 3300015261 Bacteria 507
103 Ga0213874_10010105 3300021377 Bacteria 2355
104 Ga0207710_10000608 3300025900 Bacteria 20934
105 Ga0207647_10018204 3300025904 Bacteria 4760
106 Ga0207699_10054631 3300025906 Bacteria 2373
107 Ga0207645_10228802 3300025907 Bacteria 1227
108 Ga0207684_10008549 3300025910 Bacteria 9104
109 Ga0207684_10227899 3300025910 Bacteria 1608
110 Ga0207684_10625857 3300025910 Bacteria 918
111 Ga0207654_10001292 3300025911 Bacteria 13327
112 Ga0207654_10836908 3300025911 Unclassified 665
113 Ga0207707_10119303 3300025912 Bacteria 2305
114 Ga0207695_10003747 3300025913 Bacteria 21137
115 Ga0207671_10003228 3300025914 Bacteria 16399
116 Ga0207652_10002738 3300025921 Bacteria 14793
117 Ga0207646_11002060 3300025922 Bacteria 738
118 Ga0207681_10060387 3300025923 Bacteria 2602
119 Ga0207681_10083602 3300025923 Bacteria 2260
120 Ga0207659_10547357 3300025926 Bacteria 983
121 Ga0207700_10187181 3300025928 Bacteria 1737
122 Ga0207664_10523937 3300025929 Bacteria 1062
123 Ga0207706_10071155 3300025933 Bacteria 3059
124 Ga0207669_10410267 3300025937 Unclassified 1063
125 Ga0207668_10479659 3300025972 Bacteria 1066
126 Ga0207658_10860965 3300025986 Bacteria 824
127 Ga0207703_10149109 3300026035 Unclassified 2037
128 Ga0207641_10000605 3300026088 Bacteria 39451
129 Ga0207648_10035628 3300026089 Bacteria 4384
130 Ga0207676_10839919 3300026095 Bacteria 898
131 Ga0207674_11676646 3300026116 Bacteria 604
132 Ga0207698_10014958 3300026142 Bacteria 5179
133 Ga0209588_1002174 3300027671 Bacteria 5295
134 Ga0268265_10301537 3300028380 Bacteria 1443
135 Ga0268264_10316718 3300028381 Unclassified 1474
136 Ga0307515_10860781 3300028794 Unclassified 534
137 Ga0265773_1013782 3300031018 Bacteria 726
138 Ga0265760_10158281 3300031090 Bacteria 746
139 Ga0265325_10029737 3300031241 Bacteria 2934
140 Ga0307408_100521159 3300031548 Bacteria 1044
141 Ga0307508_10515335 3300031616 Bacteria 792
142 Ga0373926_0138971 3300035083 Unclassified 922
143 Ga0373944_0030705 3300035089 Unclassified 1613
144 Ga0373923_0087221 3300035111 Unclassified 1361
145 Ga0373956_0071793 3300035119 Bacteria 1580
146 Ga0373946_0064362 3300035171 Unclassified 1568
147 Ga0373927_0177017 3300035695 Unclassified 1399
148 Ga0373925_0169837 3300037068 Unclassified 1721
149 Ga0373925_0744008 3300037068 Bacteria 808
150 Ga0395900_1248135 3300037418 Bacteria 658
151 Ga0395905_0147976 3300037471 Bacteria 2210
152 Ga0436364_0782790 3300037853 Bacteria 4560
153 Ga0436364_0836512 3300037853 Bacteria 5170
154 Ga0436365_0543426 3300039437 Bacteria 725
155 Ga0436361_1074688 3300039447 Bacteria 526
156 Ga0436363_0019020 3300039450 Bacteria 547
157 Ga0436363_0118277 3300039450 Bacteria 1577
158 Ga0436363_1128194 3300039450 Bacteria 4384
159 Ga0436362_1062415 3300039453 Bacteria 1183
160 Ga0451800_0277485 3300041459 Bacteria 714
161 Ga0439464_0276533 3300042439 Bacteria 546
162 Ga0466972_0247351 3300044658 Unclassified 834
163 Ga0466965_0942901 3300044683 Unclassified 505
164 Ga0466964_0205525 3300044706 Bacteria 948
165 Ga0453684_0025750 3300044712 Bacteria 8529
166 Ga0453684_0072452 3300044712 Bacteria 4349
167 Ga0466971_0542350 3300044719 Bacteria 577
168 Ga0466967_1269948 3300045976 Bacteria 733
169 Ga0495629_0161724 3300046459 Bacteria 1555
170 Ga0495629_0514974 3300046459 Bacteria 806
171 Ga0495580_0003590 3300046472 Bacteria 13163
172 Ga0495580_0079850 3300046472 Bacteria 2281
173 Ga0495582_0077910 3300046473 Unclassified 1838
174 Ga0495663_0204219 3300046525 Bacteria 690
175 Ga0495666_0427445 3300046526 Bacteria 594
176 Ga0495642_0037283 3300046528 Bacteria 1967
177 Ga0495652_0290969 3300046529 Unclassified 1192
178 Ga0495665_0071370 3300046531 Bacteria 1829
179 Ga0495665_0180822 3300046531 Unclassified 1096
180 Ga0495645_0151925 3300046543 Bacteria 1608
181 Ga0495667_0785698 3300046559 Bacteria 587
182 Ga0495659_0037739 3300046664 Bacteria 1713
183 Ga0495659_0148668 3300046664 Bacteria 939
184 Ga0495599_0590299 3300046678 Bacteria 648
185 Ga0495647_0417101 3300046681 Unclassified 618
186 Ga0495658_0039652 3300046683 Bacteria 2614
187 Ga0495669_0007715 3300046684 Bacteria 4516
188 Ga0495670_0217268 3300046691 Bacteria 1015
189 Ga0495604_0050338 3300047317 Bacteria 3235
190 Ga0495676_0426744 3300047321 Unclassified 877
191 Ga0495593_0133102 3300047673 Bacteria 1261
192 Ga0495593_0544052 3300047673 Bacteria 582
193 Ga0495602_0406726 3300048088 Bacteria 969
194 Ga0495602_0422675 3300048088 Bacteria 946
195 Ga0495614_0187694 3300048089 Unclassified 932
196 Ga0496111_0321186 3300048914 Bacteria 1147
197 Ga0501031_0052634 3300049568 Bacteria 2653
198 Ga0501032_0001691 3300049569 Bacteria 17484
199 Ga0501032_0037973 3300049569 Bacteria 3281
200 Ga0501032_0950597 3300049569 Unclassified 540
201 Ga0501033_0002781 3300049570 Bacteria 14664
202 Ga0501034_0001905 3300049571 Bacteria 26410
203 Ga0501034_0018795 3300049571 Bacteria 7082
204 Ga0501034_0657226 3300049571 Unclassified 949
205 Ga0501036_0003617 3300049572 Bacteria 12357
206 Ga0501036_0104720 3300049572 Bacteria 2392
207 Ga0501037_0010500 3300049573 Bacteria 6800
208 Ga0501038_0002303 3300049574 Bacteria 17757
209 Ga0501038_0047589 3300049574 Bacteria 3714
210 Ga0501038_0075230 3300049574 Bacteria 2855
211 Ga0501039_0028942 3300049575 Bacteria 4266
212 Ga0501039_0088359 3300049575 Bacteria 2414
213 Ga0501039_1078418 3300049575 Bacteria 623
214 Ga0501040_0064228 3300049576 Bacteria 2527
215 Ga0501043_0002504 3300049579 Bacteria 15532
216 Ga0501043_0027049 3300049579 Bacteria 4502
217 Ga0501043_0049498 3300049579 Bacteria 3304
218 Ga0501046_0010200 3300049580 Bacteria 8084
219 Ga0501046_0023578 3300049580 Bacteria 5060
220 Ga0501047_0001035 3300049581 Bacteria 27861
221 Ga0501047_0007387 3300049581 Bacteria 10336
222 Ga0501047_0020162 3300049581 Bacteria 6400
223 Ga0501048_0002543 3300049582 Bacteria 13959
224 Ga0501048_0050065 3300049582 Bacteria 2976
225 Ga0501067_0017662 3300049583 Bacteria 3949
226 Ga0501068_0008433 3300049584 Bacteria 5734
227 Ga0501068_0028009 3300049584 Bacteria 3329
228 Ga0501071_0189751 3300049587 Bacteria 1541
229 Ga0501072_0112095 3300049588 Bacteria 2172
230 Ga0501072_0132083 3300049588 Bacteria 1990
231 Ga0501073_0013165 3300049589 Bacteria 6030
232 Ga0501073_0013818 3300049589 Bacteria 5871
233 Ga0501073_0069187 3300049589 Bacteria 2460
234 Ga0501074_0318559 3300049590 Bacteria 1104
235 Ga0501075_1434982 3300049591 Bacteria 523
236 Ga0501076_0956325 3300049592 Bacteria 706
237 Ga0501076_1453621 3300049592 Bacteria 563
238 Ga0501202_159784 3300049652 Bacteria 595
239 Ga0501079_0190685 3300049741 Bacteria 1600
240 Ga0501080_0008237 3300049742 Bacteria 9439
241 Ga0501080_0054699 3300049742 Bacteria 3716
242 Ga0501080_0740145 3300049742 Unclassified 865
243 Ga0501083_0012290 3300049744 Bacteria 5992
244 Ga0501083_0071133 3300049744 Bacteria 2313
245 Ga0501268_028014 3300049765 Bacteria 1004
246 Ga0501035_0010475 3300049822 Bacteria 8592
247 Ga0501035_0017757 3300049822 Bacteria 6562
248 Ga0501044_0004495 3300049823 Bacteria 15597
249 Ga0501044_0011977 3300049823 Bacteria 9399
250 Ga0501045_0003433 3300049824 Bacteria 10841
251 nmdc:mga05p37_42616_c1 3300050507 Bacteria 5578
252 nmdc:mga09592_273091_c1 3300050508 Bacteria 1466
253 nmdc:mga09592_588673_c1 3300050508 Bacteria 954
254 nmdc:mga09592_954235_c1 3300050508 Bacteria 719
255 nmdc:mga0qj67_808555_c1 3300050509 Bacteria 742
256 nmdc:mga0n895_434003_c1 3300050512 Bacteria 1327
257 nmdc:mga0n895_69_c1 3300050512 Bacteria 59717
258 nmdc:mga0n895_745680_c1 3300050512 Bacteria 973
259 nmdc:mga0n895_766117_c1 3300050512 Bacteria 957
260 nmdc:mga0n895_87740_c1 3300050512 Bacteria 3109
261 nmdc:mga0rr50_15403_c1 3300050513 Bacteria 5046
262 nmdc:mga0rr50_1782643_c1 3300050513 Bacteria 518
263 nmdc:mga0rr50_179799_c1 3300050513 Bacteria 1728
264 nmdc:mga0rr50_433827_c1 3300050513 Bacteria 1112
265 nmdc:mga0rr50_4_c1 3300050513 Bacteria 338870
266 nmdc:mga0rr50_61848_c1 3300050513 Bacteria 2822
267 nmdc:mga08x19_1007_c1 3300050514 Bacteria 17598
268 nmdc:mga08x19_474120_c1 3300050514 Bacteria 882
269 nmdc:mga08x19_676826_c1 3300050514 Bacteria 732
270 nmdc:mga08x19_7293_c1 3300050514 Bacteria 6565
271 nmdc:mga0a205_40498_c1 3300050515 Bacteria 4485
272 Ga0500646_0079781 3300053090 Bacteria 997
273 Ga0501084_0202204 3300054114 Bacteria 1676
274 Ga0501082_0007365 3300060353 Bacteria 9494
275 Ga0501082_0563602 3300060353 Bacteria 996
276 Ga0157376_11285966
277 rootH1_10252507
278 JGI25405J52794_10042665
279 Ga0065712_10007991
280 Ga0065715_10006469
281 Ga0070676_10246927
282 Ga0068869_100222080
283 Ga0070689_101364115
284 Ga0070675_100409699
285 Ga0070675_100575660
286 Ga0070674_100119282
287 Ga0070674_100346630
288 Ga0070673_100174867
289 Ga0070673_100495150
290 Ga0070667_100553106
291 Ga0070709_10097879
292 Ga0070714_100319133
293 Ga0070713_100052776
294 Ga0070710_11417184
295 Ga0070711_101506893
296 Ga0070694_101455438
297 Ga0070708_100265037
298 Ga0070663_101468434
299 Ga0070681_10006263
300 Ga0070681_10313251
301 Ga0068867_100051100
302 Ga0070707_100694287
303 Ga0070707_100701529
304 Ga0070698_100515087
305 Ga0070699_100331543
306 Ga0070679_100245256
307 Ga0070672_100982646
308 Ga0070693_100137615
309 Ga0070693_100670587
310 Ga0070665_101228226
311 Ga0070665_101535549
312 Ga0070704_100068971
313 Ga0070704_100443214
314 Ga0068855_100725544
315 Ga0068857_101862156
316 Ga0068856_100728003
317 Ga0068856_102120710
318 Ga0070702_100059434
319 Ga0068852_100147782
320 Ga0068859_100079690
321 Ga0068859_100411683
322 Ga0068861_100634422
323 Ga0068858_100265097
324 Ga0068860_100156856
325 Ga0068860_102218039
326 Ga0081455_10014089
327 Ga0081455_10399648
328 Ga0081455_10409688
329 Ga0097621_100142417
330 Ga0068871_100000554
331 Ga0075428_100681109
332 Ga0075430_100798654
333 Ga0075434_100001078
334 Ga0075434_100088113
335 Ga0075434_100197921
336 Ga0075434_100392080
337 Ga0075434_100675283
338 Ga0075429_100128590
339 Ga0075429_100250639
340 Ga0075429_100582029
341 Ga0075436_100001235
342 Ga0075436_100932569
343 Ga0097620_100079687
344 Ga0097620_100411719
345 Ga0075435_100000255
346 Ga0075435_100046864
347 Ga0075435_100495561
348 Ga0105250_10247381
349 Ga0105240_10000499
350 Ga0111539_11192747
351 Ga0111539_12760506
352 Ga0105247_10000182
353 Ga0114129_10175909
354 Ga0105241_10000207
355 Ga0105241_10323715
356 Ga0105241_11160436
357 Ga0105242_10115613
358 Ga0105248_12494806
359 Ga0105237_10001188
360 Ga0105238_10464299
361 Ga0105249_11119473
362 Ga0105239_10351370
363 Ga0105239_11758666
364 Ga0105246_11648544
365 Ga0157371_11411089
366 Ga0157378_10019797
367 Ga0157378_11605447
368 Ga0163162_12589135
369 Ga0163162_13405096
370 Ga0157375_10004841
371 Ga0163163_10445072
372 Ga0157380_12568826
373 Ga0157379_10237822
374 Ga0157376_10014953
375 Ga0157376_10482028
376 Ga0157376_10828594
377 Ga0182006_1322804
378 Ga0213874_10010105
379 Ga0207710_10000608
380 Ga0207647_10018204
381 Ga0207699_10054631
382 Ga0207645_10228802
383 Ga0207684_10008549
384 Ga0207684_10227899
385 Ga0207684_10625857
386 Ga0207654_10001292
387 Ga0207654_10836908
388 Ga0207707_10119303
389 Ga0207695_10003747
390 Ga0207671_10003228
391 Ga0207652_10002738
392 Ga0207646_11002060
393 Ga0207681_10060387
394 Ga0207681_10083602
395 Ga0207659_10547357
396 Ga0207700_10187181
397 Ga0207664_10523937
398 Ga0207706_10071155
399 Ga0207669_10410267
400 Ga0207668_10479659
401 Ga0207658_10860965
402 Ga0207703_10149109
403 Ga0207641_10000605
404 Ga0207648_10035628
405 Ga0207676_10839919
406 Ga0207674_11676646
407 Ga0207698_10014958
408 Ga0209588_1002174
409 Ga0268265_10301537
410 Ga0268264_10316718
411 Ga0307515_10860781
412 Ga0265773_1013782
413 Ga0265760_10158281
414 Ga0265325_10029737
415 Ga0307408_100521159
416 Ga0307508_10515335
417 Ga0373926_0138971
418 Ga0373944_0030705
419 Ga0373923_0087221
420 Ga0373956_0071793
421 Ga0373946_0064362
422 Ga0373927_0177017
423 Ga0373925_0169837
424 Ga0373925_0744008
425 Ga0395900_1248135
426 Ga0395905_0147976
427 Ga0436364_0782790
428 Ga0436364_0836512
429 Ga0436365_0543426
430 Ga0436361_1074688
431 Ga0436363_0019020
432 Ga0436363_0118277
433 Ga0436363_1128194
434 Ga0436362_1062415
435 Ga0451800_0277485
436 Ga0439464_0276533
437 Ga0466972_0247351
438 Ga0466965_0942901
439 Ga0466964_0205525
440 Ga0453684_0025750
441 Ga0453684_0072452
442 Ga0466971_0542350
443 Ga0466967_1269948
444 Ga0495629_0161724
445 Ga0495629_0514974
446 Ga0495580_0003590
447 Ga0495580_0079850
448 Ga0495582_0077910
449 Ga0495663_0204219
450 Ga0495666_0427445
451 Ga0495642_0037283
452 Ga0495652_0290969
453 Ga0495665_0071370
454 Ga0495665_0180822
455 Ga0495645_0151925
456 Ga0495667_0785698
457 Ga0495659_0037739
458 Ga0495659_0148668
459 Ga0495599_0590299
460 Ga0495647_0417101
461 Ga0495658_0039652
462 Ga0495669_0007715
463 Ga0495670_0217268
464 Ga0495604_0050338
465 Ga0495676_0426744
466 Ga0495593_0133102
467 Ga0495593_0544052
468 Ga0495602_0406726
469 Ga0495602_0422675
470 Ga0495614_0187694
471 Ga0496111_0321186
472 Ga0501031_0052634
473 Ga0501032_0001691
474 Ga0501032_0037973
475 Ga0501032_0950597
476 Ga0501033_0002781
477 Ga0501034_0001905
478 Ga0501034_0018795
479 Ga0501034_0657226
480 Ga0501036_0003617
481 Ga0501036_0104720
482 Ga0501037_0010500
483 Ga0501038_0002303
484 Ga0501038_0047589
485 Ga0501038_0075230
486 Ga0501039_0028942
487 Ga0501039_0088359
488 Ga0501039_1078418
489 Ga0501040_0064228
490 Ga0501043_0002504
491 Ga0501043_0027049
492 Ga0501043_0049498
493 Ga0501046_0010200
494 Ga0501046_0023578
495 Ga0501047_0001035
496 Ga0501047_0007387
497 Ga0501047_0020162
498 Ga0501048_0002543
499 Ga0501048_0050065
500 Ga0501067_0017662
501 Ga0501068_0008433
502 Ga0501068_0028009
503 Ga0501071_0189751
504 Ga0501072_0112095
505 Ga0501072_0132083
506 Ga0501073_0013165
507 Ga0501073_0013818
508 Ga0501073_0069187
509 Ga0501074_0318559
510 Ga0501075_1434982
511 Ga0501076_0956325
512 Ga0501076_1453621
513 Ga0501202_159784
514 Ga0501079_0190685
515 Ga0501080_0008237
516 Ga0501080_0054699
517 Ga0501080_0740145
518 Ga0501083_0012290
519 Ga0501083_0071133
520 Ga0501268_028014
521 Ga0501035_0010475
522 Ga0501035_0017757
523 Ga0501044_0004495
524 Ga0501044_0011977
525 Ga0501045_0003433
526 nmdc:mga05p37_42616_c1
527 nmdc:mga09592_273091_c1
528 nmdc:mga09592_588673_c1
529 nmdc:mga09592_954235_c1
530 nmdc:mga0qj67_808555_c1
531 nmdc:mga0n895_434003_c1
532 nmdc:mga0n895_69_c1
533 nmdc:mga0n895_745680_c1
534 nmdc:mga0n895_766117_c1
535 nmdc:mga0n895_87740_c1
536 nmdc:mga0rr50_15403_c1
537 nmdc:mga0rr50_1782643_c1
538 nmdc:mga0rr50_179799_c1
539 nmdc:mga0rr50_433827_c1
540 nmdc:mga0rr50_4_c1
541 nmdc:mga0rr50_61848_c1
542 nmdc:mga08x19_1007_c1
543 nmdc:mga08x19_474120_c1
544 nmdc:mga08x19_676826_c1
545 nmdc:mga08x19_7293_c1
546 nmdc:mga0a205_40498_c1
547 Ga0500646_0079781
548 Ga0501084_0202204
549 Ga0501082_0007365
550 Ga0501082_0563602

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01022

HTH_5

Bacterial regulatory protein, arsR family

33

79

0.98

PF12840

HTH_20

Helix-turn-helix domain

31

80

0.97

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

33

78

0.94

PF09339

HTH_IclR

IclR helix-turn-helix domain

37

81

0.88

PF12802

MarR_2

MarR family

33

86

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j0e-assembly1.cif.gz_B structures of two arsr as(iii)-responsive repressors: implications for the mechanism of derepression 0.9487 5 76
6j0e-assembly1.cif.gz_A structures of two arsr as(iii)-responsive repressors: implications for the mechanism of derepression 0.9404 5 79
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.9404 13 68
8cll-assembly1.cif.gz_F structural insights into human tfiiic promoter recognition 0.9318 26 67
5zuo-assembly1.cif.gz_A crystal structure of bz junction in diverse sequence 0.9297 26 68
ID Description Score Start End Superfamily
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9793 10 66 1.10.10.10
af_Q2FXF7_1_94_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9536 5 80 1.10.10.10
af_I6Y1A7_25_116_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9531 4 81 1.10.10.10
af_Q58793_245_317_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.943 3 67 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9425 10 72 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A542ZEQ3-F1-model_v4 ArsR family transcriptional regulator 0.9932 4 80 GO:0003700
AF-A0A1Y1RPF1-F1-model_v4 HTH arsR-type domain-containing protein 0.9859 5 80 GO:0003700
AF-A0A3D3LWQ5-F1-model_v4 HTH arsR-type domain-containing protein 0.9848 2 82 GO:0003700
AF-A0A2V7U777-F1-model_v4 Transcriptional regulator 0.9829 1 75 GO:0003700
AF-A0A2T0VI29-F1-model_v4 DNA-binding transcriptional ArsR family regulator 0.9798 5 81 GO:0003677
GO:0003700

Map