F380194

General Info

Members Datasets Scaffolds Average Seq Length
275 210 244 537

Family's Representative Sequence

Representative Sequence 3300005338|Ga0068868_100131840|Ga0068868_1001318402
Length 574
Sequence MSKINGDPSETFDFIIVGAGAAGSILANRLSEDGKSTVCVLEAGPKDWHPFLHIPAGFIKVLFDPAFTWQFSSEPTDNTKGRRIPIPVGRTLGGSTAINGLAYNRGLPQDFDAWAAAGNRGWGYADVLPYFKRSERKVGGGDDAYHGRTGEQAVTDMDWFHPISEAFIAGAAGQGIPRNPDYNGASQEGVGYYQRTILNGWRQSAARSFLRPAKGRKNLEVRTQAHATAVLFEGKRATGVQYVRGAKRDTTKVVRARREVIVCGGSINTPKLLQISGVGPGALLQSLNVRPVHELPGVGENLRDHFSVRMVAKVKNSLTMNELARGARLGAQITRWMLGRPNILALSPSLVHWFWKSKEGLNAPDLQGVFTPASYREGYIGVLDDYPGMTCGVWQHRPESVGYVHARSSNPFQDPIVQPNYLEDPRDQEVLLGGMRIARSLMRTPELAKFFDAETLPGKDVTSDDELLDYARRVGVSCYHVMGTARMGPSSDPSTVVDDELRVHGLAGLRVVDASVMPNMPSANTCASTMMIAEKAADMIRGLPPLPREAPQASSPPEPVASRDQSTRQFEVHR

Samples

Sample ID Description Type Environment
1 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
2 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
3 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
4 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
5 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
6 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
7 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
8 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
9 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
10 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
11 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
12 2858950400 Achromobacter sp. K91 Isolate Unclassified
13 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
14 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
15 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
16 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
17 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
18 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
19 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
20 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
21 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
22 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
23 2941479691
24 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
25 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
26 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
27 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
28 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
29 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
30 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
31 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
32 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
33 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
35 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
36 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
37 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
38 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
39 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
40 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
41 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
42 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
43 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
44 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
45 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
46 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
47 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
48 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
49 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
50 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
51 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
52 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
53 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
54 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
55 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
56 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
57 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
58 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
59 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
60 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
61 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
62 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
63 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
64 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
67 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
68 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
69 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
70 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
71 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
72 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
73 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
74 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
75 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
76 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
77 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
78 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
79 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
80 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
81 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
82 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
83 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
84 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
85 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
86 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
89 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
90 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
91 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
92 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
94 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
95 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
96 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
131 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
132 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
133 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
134 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
141 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
142 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
143 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
144 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
145 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
149 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
150 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
151 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
152 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
153 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
154 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
155 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
156 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
157 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
158 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
159 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
162 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
163 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
164 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
165 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
166 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
167 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
168 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
169 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
170 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
171 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
172 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
173 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
174 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
177 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
178 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
179 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
180 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
181 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
182 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
183 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
184 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
185 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
186 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
187 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
188 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
189 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
190 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
191 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
192 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
193 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
194 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
195 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
196 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
197 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
200 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
201 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
202 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
203 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
204 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
205 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
206 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
207 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
208 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
209 8004312739 Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 Isolate Nodule
210 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.73
Metatranscriptomes 0
Isolates 11.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.82
Nodule 3.27
Rhizoplane 4.36
Rhizosphere 75.27
Stem 0
Stem Tuber 0
Unclassified 11.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10009702 3300001989 Bacteria 3582
2 JGI24737J22298_10007481 3300001990 Bacteria 3686
3 JGI24735J21928_10008428 3300002067 Bacteria 3332
4 JGI25159J45721_1002219 3300002987 Bacteria 7516
5 JGI25406J46586_10002889 3300003203 Bacteria 8100
6 JGI25406J46586_10006661 3300003203 Bacteria 5307
7 JGI25406J46586_10012063 3300003203 Bacteria 3765
8 JGI25153J46596_10001129 3300003215 Bacteria 16151
9 JGI25153J46596_10004396 3300003215 Bacteria 7605
10 JGI25160J50197_1000252 3300003354 Bacteria 40935
11 JGI25161J50226_1000185 3300003374 Bacteria 40935
12 Ga0055543_1000249 3300004625 Bacteria 40973
13 Ga0065165_1000824 3300005262 Bacteria 40973
14 Ga0068869_100001714 3300005334 Bacteria 13090
15 Ga0070666_10007981 3300005335 Bacteria 6544
16 Ga0070666_10023038 3300005335 Bacteria 4049
17 Ga0070682_100001847 3300005337 Bacteria 11815
18 Ga0068868_100131840 3300005338 Bacteria 2046
19 Ga0070689_100074569 3300005340 Bacteria 2655
20 Ga0070661_100024422 3300005344 Bacteria 4335
21 Ga0070669_100000334 3300005353 Bacteria 36683
22 Ga0070671_100000138 3300005355 Bacteria 46941
23 Ga0070671_100018651 3300005355 Bacteria 5637
24 Ga0070674_100028302 3300005356 Bacteria 3681
25 Ga0070659_100036963 3300005366 Bacteria 3806
26 Ga0070667_100086474 3300005367 Bacteria 2690
27 Ga0070713_100136173 3300005436 Bacteria 2170
28 Ga0070705_100007929 3300005440 Bacteria 5247
29 Ga0070705_100090462 3300005440 Bacteria 1905
30 Ga0070694_100002762 3300005444 Bacteria 10412
31 Ga0070708_100012858 3300005445 Bacteria 6839
32 Ga0070708_100022672 3300005445 Bacteria 5328
33 Ga0070708_100058328 3300005445 Bacteria 3439
34 Ga0070663_100011884 3300005455 Bacteria 5488
35 Ga0070662_100017008 3300005457 Bacteria 4892
36 Ga0070706_100209082 3300005467 Bacteria 1822
37 Ga0070698_100020783 3300005471 Bacteria 6880
38 Ga0070698_100214247 3300005471 Bacteria 1860
39 Ga0070699_100007613 3300005518 Bacteria 9416
40 Ga0070699_100011329 3300005518 Bacteria 7700
41 Ga0070699_100092141 3300005518 Bacteria 2650
42 Ga0070684_100147787 3300005535 Bacteria 2128
43 Ga0068853_100001980 3300005539 Bacteria 15101
44 Ga0068853_100004364 3300005539 Bacteria 10943
45 Ga0068853_100027924 3300005539 Bacteria 4745
46 Ga0070672_100046750 3300005543 Bacteria 3354
47 Ga0070693_100001567 3300005547 Bacteria 10320
48 Ga0070665_100040602 3300005548 Bacteria 4677
49 Ga0070704_100021186 3300005549 Bacteria 4209
50 Ga0068855_100031287 3300005563 Bacteria 6356
51 Ga0068855_100044103 3300005563 Bacteria 5279
52 Ga0068855_100160789 3300005563 Bacteria 2549
53 Ga0068855_100238446 3300005563 Unclassified 2033
54 Ga0068857_100020814 3300005577 Bacteria 5771
55 Ga0068857_100027901 3300005577 Bacteria 4978
56 Ga0068854_100005150 3300005578 Bacteria 8240
57 Ga0068854_100006398 3300005578 Bacteria 7492
58 Ga0068854_100025249 3300005578 Bacteria 4076
59 Ga0068854_100062188 3300005578 Bacteria 2706
60 Ga0068856_100038616 3300005614 Bacteria 4687
61 Ga0068852_100035665 3300005616 Bacteria 4152
62 Ga0068859_100009644 3300005617 Bacteria 9747
63 Ga0068864_100116966 3300005618 Bacteria 2379
64 Ga0068870_10000260 3300005840 Bacteria 19526
65 Ga0068858_100000104 3300005842 Bacteria 88260
66 Ga0081455_10000741 3300005937 Bacteria 42399
67 Ga0081540_1025594 3300005983 Bacteria 3391
68 Ga0081539_10000326 3300005985 Bacteria 106248
69 Ga0081539_10001967 3300005985 Bacteria 31294
70 Ga0075431_100022312 3300006847 Bacteria 6470
71 Ga0075429_100002609 3300006880 Bacteria 15194
72 Ga0097620_100009644 3300006931 Bacteria 9747
73 Ga0105240_10008017 3300009093 Bacteria 15207
74 Ga0105240_10040706 3300009093 Bacteria 5940
75 Ga0114129_10020489 3300009147 Bacteria 9405
76 Ga0105241_10024277 3300009174 Bacteria 4503
77 Ga0105248_10033680 3300009177 Bacteria 5724
78 Ga0105248_10039876 3300009177 Bacteria 5264
79 Ga0105237_10100432 3300009545 Bacteria 2885
80 Ga0105238_10006040 3300009551 Bacteria 12007
81 Ga0105238_10008387 3300009551 Bacteria 10338
82 Ga0105239_10000024 3300010375 Bacteria 256334
83 Ga0105239_10027256 3300010375 Bacteria 6290
84 Ga0105239_10260733 3300010375 Bacteria 1948
85 Ga0157371_10064004 3300013102 Bacteria 2606
86 Ga0157369_10084366 3300013105 Bacteria 3396
87 Ga0163162_10000536 3300013306 Bacteria 35117
88 Ga0157372_10004173 3300013307 Bacteria 15466
89 Ga0163161_10008844 3300017792 Bacteria 6964
90 Ga0209436_103289 3300025208 Bacteria 4360
91 Ga0209130_1000482 3300025284 Bacteria 40987
92 Ga0209758_1001182 3300025297 Bacteria 33023
93 Ga0207426_1000462 3300025302 Bacteria 63167
94 Ga0207697_10027558 3300025315 Bacteria 2323
95 Ga0207653_10002859 3300025885 Bacteria 5481
96 Ga0207688_10004872 3300025901 Bacteria 7309
97 Ga0207688_10069085 3300025901 Bacteria 2002
98 Ga0207647_10032499 3300025904 Bacteria 3351
99 Ga0207645_10001330 3300025907 Bacteria 20316
100 Ga0207643_10001526 3300025908 Bacteria 13220
101 Ga0207684_10005025 3300025910 Bacteria 12331
102 Ga0207684_10025362 3300025910 Bacteria 5051
103 Ga0207654_10000937 3300025911 Bacteria 16036
104 Ga0207707_10000808 3300025912 Bacteria 30642
105 Ga0207695_10000506 3300025913 Bacteria 82904
106 Ga0207695_10008819 3300025913 Bacteria 12561
107 Ga0207695_10069751 3300025913 Bacteria 3596
108 Ga0207671_10019633 3300025914 Bacteria 5164
109 Ga0207660_10001105 3300025917 Bacteria 18015
110 Ga0207657_10000929 3300025919 Bacteria 30994
111 Ga0207652_10005381 3300025921 Bacteria 10386
112 Ga0207646_10029317 3300025922 Bacteria 5003
113 Ga0207681_10003860 3300025923 Bacteria 9309
114 Ga0207694_10000086 3300025924 Bacteria 108152
115 Ga0207700_10121621 3300025928 Bacteria 2118
116 Ga0207644_10000005 3300025931 Bacteria 441948
117 Ga0207665_10006704 3300025939 Bacteria 7640
118 Ga0207691_10024866 3300025940 Bacteria 5628
119 Ga0207689_10000021 3300025942 Bacteria 110537
120 Ga0207679_10000336 3300025945 Bacteria 34925
121 Ga0207667_10028034 3300025949 Bacteria 6120
122 Ga0207667_10057151 3300025949 Bacteria 4096
123 Ga0207667_10199549 3300025949 Unclassified 2053
124 Ga0207640_10023717 3300025981 Bacteria 3691
125 Ga0207640_10032606 3300025981 Bacteria 3231
126 Ga0207703_10000136 3300026035 Bacteria 89612
127 Ga0207639_10009334 3300026041 Bacteria 6765
128 Ga0207639_10014482 3300026041 Bacteria 5548
129 Ga0207678_10021463 3300026067 Bacteria 5662
130 Ga0207678_10034669 3300026067 Bacteria 4395
131 Ga0207678_10110013 3300026067 Bacteria 2350
132 Ga0207702_10000098 3300026078 Bacteria 101326
133 Ga0207702_10024486 3300026078 Bacteria 5009
134 Ga0207702_10030369 3300026078 Bacteria 4503
135 Ga0207648_10007692 3300026089 Bacteria 10542
136 Ga0207676_10152297 3300026095 Bacteria 1993
137 Ga0207674_10001479 3300026116 Bacteria 30347
138 Ga0207674_10019802 3300026116 Bacteria 7282
139 Ga0207674_10034362 3300026116 Bacteria 5301
140 Ga0207674_10046805 3300026116 Bacteria 4439
141 Ga0207675_100003720 3300026118 Bacteria 14856
142 Ga0207698_10031860 3300026142 Bacteria 3812
143 Ga0265338_10000708 3300028800 Bacteria 56942
144 Ga0265338_10015274 3300028800 Bacteria 8453
145 Ga0265340_10057629 3300031247 Bacteria 1866
146 Ga0265339_10002867 3300031249 Bacteria 12212
147 Ga0265331_10009184 3300031250 Bacteria 5575
148 Ga0265327_10000076 3300031251 Bacteria 212272
149 Ga0307412_10000078 3300031911 Bacteria 94880
150 Ga0307510_10000192 3300033180 Bacteria 53067
151 Ga0373937_0074878 3300036401 Bacteria 3125
152 Ga0395900_0002409 3300037418 Bacteria 20634
153 Ga0395898_0027358 3300037466 Bacteria 5727
154 Ga0436365_1152982 3300039437 Bacteria 2672
155 Ga0436360_1377787 3300039438 Bacteria 7589
156 Ga0436361_0030283 3300039447 Bacteria 4065
157 Ga0436361_0342622 3300039447 Bacteria 8108
158 Ga0439448_0023878 3300042005 Bacteria 1910
159 Ga0451577_0075003 3300042876 Bacteria 3016
160 Ga0453683_0020137 3300044673 Bacteria 4264
161 Ga0453684_0271723 3300044712 Bacteria 1937
162 Ga0451576_0015972 3300045051 Bacteria 8299
163 Ga0451576_0028724 3300045051 Bacteria 5955
164 Ga0451576_0120708 3300045051 Bacteria 2729
165 Ga0451576_0281449 3300045051 Bacteria 1739
166 Ga0495627_000032 3300046453 Bacteria 224665
167 Ga0495590_0018064 3300046457 Bacteria 2528
168 Ga0495591_000018 3300046458 Bacteria 232216
169 Ga0495653_0020523 3300046463 Bacteria 5356
170 Ga0495650_0008135 3300046471 Bacteria 6172
171 Ga0495580_0121618 3300046472 Bacteria 1812
172 Ga0495605_0002079 3300046474 Bacteria 12615
173 Ga0495605_0009612 3300046474 Bacteria 5431
174 Ga0495584_0038092 3300046491 Bacteria 2431
175 Ga0495585_0002008 3300046492 Bacteria 15081
176 Ga0495607_0000013 3300046501 Bacteria 189755
177 Ga0495607_0000753 3300046501 Bacteria 31025
178 Ga0495583_0000109 3300046506 Bacteria 138768
179 Ga0495583_0000911 3300046506 Bacteria 34999
180 Ga0495606_0000162 3300046507 Bacteria 117378
181 Ga0495606_0001429 3300046507 Bacteria 32047
182 Ga0495610_0000019 3300046512 Bacteria 351524
183 Ga0495620_0012711 3300046515 Bacteria 4333
184 Ga0495632_0000635 3300046519 Bacteria 32308
185 Ga0495637_0005686 3300046520 Bacteria 6326
186 Ga0495648_0030495 3300046524 Bacteria 3564
187 Ga0495642_0005562 3300046528 Bacteria 4844
188 Ga0495597_0000013 3300046542 Bacteria 203829
189 Ga0495633_0004102 3300046558 Bacteria 9398
190 Ga0495668_0008599 3300046616 Bacteria 6350
191 Ga0495635_0028354 3300046663 Bacteria 3891
192 Ga0495661_0000045 3300046665 Bacteria 148664
193 Ga0495661_0000144 3300046665 Bacteria 82961
194 Ga0495661_0055329 3300046665 Bacteria 2378
195 Ga0495599_0012103 3300046678 Bacteria 5311
196 Ga0495669_0014706 3300046684 Bacteria 3346
197 Ga0495649_0047962 3300046694 Bacteria 2322
198 Ga0495649_0049713 3300046694 Bacteria 2277
199 Ga0495600_0060270 3300046809 Bacteria 2478
200 Ga0495660_0002355 3300046810 Bacteria 12078
201 Ga0495672_0004450 3300047320 Bacteria 11475
202 Ga0495672_0021909 3300047320 Bacteria 4161
203 Ga0495683_0006416 3300047323 Bacteria 6431
204 Ga0495673_0000601 3300047469 Bacteria 35837
205 Ga0495602_0020672 3300048088 Bacteria 6502
206 Ga0496101_0029618 3300048904 Bacteria 3829
207 Ga0496104_0004874 3300048907 Bacteria 11699
208 Ga0496105_0032784 3300048908 Bacteria 4264
209 Ga0496105_0100811 3300048908 Bacteria 2384
210 Ga0496107_0000501 3300048910 Bacteria 21651
211 Ga0496111_0080138 3300048914 Bacteria 2382
212 Ga0496113_0005305 3300048916 Bacteria 8024
213 Ga0496114_0034558 3300048917 Bacteria 4172
214 Ga0496114_0074873 3300048917 Bacteria 2851
215 Ga0496115_0012045 3300048918 Bacteria 6501
216 Ga0496118_0024469 3300048921 Bacteria 5208
217 Ga0496119_0012356 3300048922 Bacteria 6943
218 Ga0496120_0013722 3300048923 Bacteria 5439
219 Ga0496121_0000107 3300048924 Bacteria 188964
220 Ga0496121_0000153 3300048924 Bacteria 150635
221 Ga0496121_0000583 3300048924 Bacteria 68520
222 Ga0496121_0053074 3300048924 Bacteria 3398
223 Ga0496122_0000186 3300048925 Bacteria 144012
224 Ga0496123_0000162 3300048926 Bacteria 134316
225 Ga0496123_0005295 3300048926 Bacteria 13071
226 Ga0496125_0000023 3300048928 Bacteria 449042
227 Ga0496125_0004293 3300048928 Bacteria 16548
228 Ga0496125_0009492 3300048928 Bacteria 9987
229 Ga0496125_0018306 3300048928 Bacteria 6656
230 Ga0496126_0046135 3300048929 Bacteria 4000
231 Ga0495678_007094 3300049459 Bacteria 5860
232 Ga0501034_0000124 3300049571 Bacteria 142890
233 Ga0501037_0004726 3300049573 Bacteria 9898
234 Ga0501072_0001275 3300049588 Bacteria 18814
235 Ga0501044_0060338 3300049823 Bacteria 3884
236 nmdc:mga00v17_54337_c1 3300050491 Bacteria 2443
237 nmdc:mga06r32_23180_c1 3300050510 Bacteria 5742
238 nmdc:mga0a205_122562_c1 3300050515 Bacteria 2499
239 nmdc:mga0a205_13460_c1 3300050515 Bacteria 7615
240 Ga0495619_0010210 3300053085 Bacteria 5914
241 Ga0500643_002597 3300053087 Bacteria 9162
242 Ga0500650_0000029 3300053098 Bacteria 54937
243 Ga0500618_001449 3300053125 Bacteria 10541
244 Ga0500568_0016249 3300053139 Bacteria 3315

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0271723 Ga0453684_0271723_10_1383 434
2 3300046474 Ga0495605_0009612 Ga0495605_0009612_3387_4991 488
3 3300039437 Ga0436365_1152982 Ga0436365_1152982_137_1639 490
4 iso_pu_bacteria 2808606306 2808629617 492
5 3300025315 Ga0207697_10027558 Ga0207697_100275582 495
6 3300048917 Ga0496114_0074873 Ga0496114_0074873_152_1747 496
7 iso_pu_bacteria 2924710171 2924714675 496
8 3300045051 Ga0451576_0281449 Ga0451576_0281449_177_1715 499
9 3300005334 Ga0068869_100001714 Ga0068869_1000017146 502
10 3300005337 Ga0070682_100001847 Ga0070682_10000184710 502
11 3300005340 Ga0070689_100074569 Ga0070689_1000745692 502
12 3300005344 Ga0070661_100024422 Ga0070661_1000244222 502
13 3300005366 Ga0070659_100036963 Ga0070659_1000369633 502
14 3300005440 Ga0070705_100007929 Ga0070705_1000079294 502
15 3300005445 Ga0070708_100012858 Ga0070708_1000128588 502
16 3300005455 Ga0070663_100011884 Ga0070663_1000118844 502
17 3300005457 Ga0070662_100017008 Ga0070662_1000170084 502
18 3300005471 Ga0070698_100020783 Ga0070698_1000207837 502
19 3300005535 Ga0070684_100147787 Ga0070684_1001477872 502
20 3300005539 Ga0068853_100004364 Ga0068853_1000043643 502
21 3300005543 Ga0070672_100046750 Ga0070672_1000467503 502
22 3300005547 Ga0070693_100001567 Ga0070693_1000015676 502
23 3300005549 Ga0070704_100021186 Ga0070704_1000211862 502
24 3300005563 Ga0068855_100160789 Ga0068855_1001607892 502
25 3300005578 Ga0068854_100005150 Ga0068854_1000051506 502
26 3300005617 Ga0068859_100009644 Ga0068859_1000096448 502
27 3300005840 Ga0068870_10000260 Ga0068870_100002605 502
28 3300006931 Ga0097620_100009644 Ga0097620_1000096448 502
29 3300009545 Ga0105237_10100432 Ga0105237_101004322 502
30 3300013102 Ga0157371_10064004 Ga0157371_100640041 502
31 3300013105 Ga0157369_10084366 Ga0157369_100843662 502
32 3300013307 Ga0157372_10004173 Ga0157372_1000417310 502
33 3300025885 Ga0207653_10002859 Ga0207653_100028593 502
34 3300025901 Ga0207688_10004872 Ga0207688_100048724 502
35 3300025908 Ga0207643_10001526 Ga0207643_100015266 502
36 3300025910 Ga0207684_10005025 Ga0207684_100050257 502
37 3300025912 Ga0207707_10000808 Ga0207707_100008082 502
38 3300025917 Ga0207660_10001105 Ga0207660_1000110518 502
39 3300025919 Ga0207657_10000929 Ga0207657_1000092936 502
40 3300025921 Ga0207652_10005381 Ga0207652_100053812 502
41 3300025940 Ga0207691_10024866 Ga0207691_100248664 502
42 3300025942 Ga0207689_10000021 Ga0207689_1000002182 502
43 3300025945 Ga0207679_10000336 Ga0207679_100003362 502
44 3300026067 Ga0207678_10021463 Ga0207678_100214633 502
45 3300026078 Ga0207702_10024486 Ga0207702_100244864 502
46 3300026089 Ga0207648_10007692 Ga0207648_100076928 502
47 3300026116 Ga0207674_10001479 Ga0207674_100014792 502
48 3300026118 Ga0207675_100003720 Ga0207675_1000037205 502
49 3300042005 Ga0439448_0023878 Ga0439448_0023878_216_1799 502
50 3300042876 Ga0451577_0075003 Ga0451577_0075003_1178_2761 502
51 3300045051 Ga0451576_0028724 Ga0451576_0028724_3369_4952 502
52 3300050515 nmdc:mga0a205_13460_c1 nmdc:mga0a205_13460_c1_5897_7480 502
53 3300005518 Ga0070699_100092141 Ga0070699_1000921412 505
54 3300005440 Ga0070705_100090462 Ga0070705_1000904621 513
55 3300005467 Ga0070706_100209082 Ga0070706_1002090821 513
56 3300005471 Ga0070698_100214247 Ga0070698_1002142471 513
57 3300005444 Ga0070694_100002762 Ga0070694_10000276211 514
58 3300005518 Ga0070699_100007613 Ga0070699_1000076133 514
59 3300025907 Ga0207645_10001330 Ga0207645_100013303 514
60 3300025910 Ga0207684_10025362 Ga0207684_100253622 514
61 3300025922 Ga0207646_10029317 Ga0207646_100293173 514
62 3300044673 Ga0453683_0020137 Ga0453683_0020137_2394_3977 514
63 3300045051 Ga0451576_0015972 Ga0451576_0015972_558_2141 514
64 3300045051 Ga0451576_0120708 Ga0451576_0120708_566_2149 514
65 3300046472 Ga0495580_0121618 Ga0495580_0121618_141_1724 514
66 3300049588 Ga0501072_0001275 Ga0501072_0001275_846_2429 514
67 3300046501 Ga0495607_0000753 Ga0495607_0000753_26549_28240 515
68 3300046694 Ga0495649_0047962 Ga0495649_0047962_542_2167 515
69 3300047320 Ga0495672_0021909 Ga0495672_0021909_305_1996 515
70 3300046453 Ga0495627_000032 Ga0495627_000032_53686_55374 518
71 3300046458 Ga0495591_000018 Ga0495591_000018_68696_70387 518
72 3300046474 Ga0495605_0002079 Ga0495605_0002079_9088_10779 518
73 3300046501 Ga0495607_0000013 Ga0495607_0000013_134726_136417 518
74 3300046542 Ga0495597_0000013 Ga0495597_0000013_58446_60137 518
75 3300046694 Ga0495649_0049713 Ga0495649_0049713_265_1956 518
76 3300046810 Ga0495660_0002355 Ga0495660_0002355_9447_11138 518
77 3300048924 Ga0496121_0000583 Ga0496121_0000583_57837_59441 518
78 3300048921 Ga0496118_0024469 Ga0496118_0024469_1113_2747 520
79 3300048923 Ga0496120_0013722 Ga0496120_0013722_725_2359 520
80 3300048924 Ga0496121_0000153 Ga0496121_0000153_126480_128114 520
81 3300048926 Ga0496123_0005295 Ga0496123_0005295_8853_10487 520
82 3300048928 Ga0496125_0000023 Ga0496125_0000023_78574_80208 520
83 3300048929 Ga0496126_0046135 Ga0496126_0046135_1481_3115 520
84 3300039447 Ga0436361_0342622 Ga0436361_0342622_3351_4949 523
85 3300031247 Ga0265340_10057629 Ga0265340_100576292 526
86 3300031249 Ga0265339_10002867 Ga0265339_100028673 526
87 3300053087 Ga0500643_002597 Ga0500643_002597_4105_5730 526
88 iso_pu_bacteria 2511231027 2511392132 526
89 iso_pu_bacteria 2765235802 2765467699 526
90 iso_pu_bacteria 2842871566 2842875218 526
91 iso_pu_bacteria 2919119836 2919120745 526
92 iso_pu_bacteria 2928521798 2928522389 526
93 iso_pu_bacteria 2954011201 2954014188 526
94 iso_pu_bacteria 3002141150 3002141940 526
95 3300005335 Ga0070666_10007981 Ga0070666_100079817 527
96 3300005353 Ga0070669_100000334 Ga0070669_1000003348 527
97 3300005355 Ga0070671_100000138 Ga0070671_10000013829 527
98 3300005356 Ga0070674_100028302 Ga0070674_1000283022 527
99 3300005367 Ga0070667_100086474 Ga0070667_1000864741 527
100 3300005618 Ga0068864_100116966 Ga0068864_1001169662 527
101 3300009177 Ga0105248_10039876 Ga0105248_100398765 527
102 3300017792 Ga0163161_10008844 Ga0163161_100088445 527
103 3300025923 Ga0207681_10003860 Ga0207681_100038602 527
104 3300025931 Ga0207644_10000005 Ga0207644_10000005190 527
105 3300026095 Ga0207676_10152297 Ga0207676_101522971 527
106 3300048904 Ga0496101_0029618 Ga0496101_0029618_1148_2755 527
107 3300048908 Ga0496105_0100811 Ga0496105_0100811_211_1818 527
108 3300048910 Ga0496107_0000501 Ga0496107_0000501_16505_18112 527
109 3300048916 Ga0496113_0005305 Ga0496113_0005305_1974_3581 527
110 iso_pu_bacteria 2775506902 2776269121 527
111 iso_pu_bacteria 2775506904 2776283740 527
112 3300005445 Ga0070708_100022672 Ga0070708_1000226723 528
113 3300049573 Ga0501037_0004726 Ga0501037_0004726_4125_5762 528
114 3300049823 Ga0501044_0060338 Ga0501044_0060338_471_2108 528
115 iso_pu_bacteria 2977898635 2977903245 528
116 iso_pu_bacteria 2996386984 2996393269 528
117 iso_pu_bacteria 8004312739 8004317812 528
118 3300010375 Ga0105239_10000024 Ga0105239_10000024217 529
119 3300048924 Ga0496121_0000107 Ga0496121_0000107_33454_35055 529
120 iso_pu_bacteria 2839993093 2839993672 529
121 iso_pu_bacteria 2858950400 2858954494 529
122 iso_pu_bacteria 2881412998 2881417104 529
123 iso_pu_bacteria 2941479691 2941484821 529
124 3300005445 Ga0070708_100058328 Ga0070708_1000583281 531
125 3300005518 Ga0070699_100011329 Ga0070699_1000113292 531
126 3300025901 Ga0207688_10069085 Ga0207688_100690852 531
127 3300036401 Ga0373937_0074878 Ga0373937_0074878_708_2336 531
128 3300049571 Ga0501034_0000124 Ga0501034_0000124_135504_137195 531
129 iso_pu_bacteria 2932422444 2932426291 531
130 iso_pu_bacteria 2996341866 2996343432 531
131 3300005335 Ga0070666_10023038 Ga0070666_100230382 532
132 3300005548 Ga0070665_100040602 Ga0070665_1000406024 532
133 3300005563 Ga0068855_100044103 Ga0068855_1000441031 532
134 3300028800 Ga0265338_10000708 Ga0265338_1000070819 532
135 3300031911 Ga0307412_10000078 Ga0307412_1000007848 532
136 3300046507 Ga0495606_0001429 Ga0495606_0001429_8116_9750 532
137 3300046684 Ga0495669_0014706 Ga0495669_0014706_466_2100 532
138 3300047323 Ga0495683_0006416 Ga0495683_0006416_2453_4087 532
139 3300048924 Ga0496121_0053074 Ga0496121_0053074_1416_3050 532
140 3300048925 Ga0496122_0000186 Ga0496122_0000186_72968_74602 532
141 3300048926 Ga0496123_0000162 Ga0496123_0000162_77891_79525 532
142 3300053098 Ga0500650_0000029 Ga0500650_0000029_22475_24085 532
143 iso_pu_bacteria 2513237082 2513558487 532
144 iso_pu_bacteria 2513237082 2513558531 532
145 iso_pu_bacteria 2751185846 2753569846 532
146 iso_pu_bacteria 2791355137 2792840343 532
147 iso_pu_bacteria 2871435913 2871436233 532
148 iso_pu_bacteria 2894023352 2894023762 532
149 iso_pu_bacteria 2904615490 2904620324 532
150 iso_pu_bacteria 2929199973 2929203625 532
151 iso_pu_bacteria 8055909800 8055911184 532
152 3300025284 Ga0209130_1000482 Ga0209130_100048215 533
153 3300025302 Ga0207426_1000462 Ga0207426_100046221 533
154 iso_pu_bacteria 2767802442 2770198520 533
155 3300003203 JGI25406J46586_10002889 JGI25406J46586_100028896 534
156 3300003203 JGI25406J46586_10012063 JGI25406J46586_100120633 534
157 3300005937 Ga0081455_10000741 Ga0081455_100007414 534
158 3300005985 Ga0081539_10000326 Ga0081539_1000032630 534
159 3300031250 Ga0265331_10009184 Ga0265331_100091843 534
160 3300031251 Ga0265327_10000076 Ga0265327_1000007699 534
161 3300046558 Ga0495633_0004102 Ga0495633_0004102_4743_6359 534
162 3300046663 Ga0495635_0028354 Ga0495635_0028354_479_2104 534
163 3300046678 Ga0495599_0012103 Ga0495599_0012103_1976_3601 534
164 3300046809 Ga0495600_0060270 Ga0495600_0060270_207_1832 534
165 3300050491 nmdc:mga00v17_54337_c1 nmdc:mga00v17_54337_c1_707_2365 534
166 3300053085 Ga0495619_0010210 Ga0495619_0010210_1808_3433 534
167 3300003203 JGI25406J46586_10006661 JGI25406J46586_100066614 535
168 3300005842 Ga0068858_100000104 Ga0068858_10000010432 535
169 3300005985 Ga0081539_10001967 Ga0081539_100019678 535
170 3300009177 Ga0105248_10033680 Ga0105248_100336802 535
171 3300013306 Ga0163162_10000536 Ga0163162_100005366 535
172 3300026035 Ga0207703_10000136 Ga0207703_1000013631 535
173 3300046512 Ga0495610_0000019 Ga0495610_0000019_189687_191309 535
174 3300046515 Ga0495620_0012711 Ga0495620_0012711_532_2154 535
175 3300053139 Ga0500568_0016249 Ga0500568_0016249_466_2103 535
176 iso_pu_bacteria 2894772417 2894777034 535
177 3300005436 Ga0070713_100136173 Ga0070713_1001361731 536
178 3300025928 Ga0207700_10121621 Ga0207700_101216212 536
179 3300033180 Ga0307510_10000192 Ga0307510_1000019238 536
180 3300046463 Ga0495653_0020523 Ga0495653_0020523_2797_4464 536
181 3300046471 Ga0495650_0008135 Ga0495650_0008135_1031_2722 536
182 3300046492 Ga0495585_0002008 Ga0495585_0002008_11625_13292 536
183 3300046506 Ga0495583_0000109 Ga0495583_0000109_130564_132255 536
184 3300046506 Ga0495583_0000911 Ga0495583_0000911_25044_26735 536
185 3300046507 Ga0495606_0000162 Ga0495606_0000162_79535_81202 536
186 3300046519 Ga0495632_0000635 Ga0495632_0000635_24034_25725 536
187 3300046520 Ga0495637_0005686 Ga0495637_0005686_66_1757 536
188 3300046616 Ga0495668_0008599 Ga0495668_0008599_3313_4938 536
189 3300046665 Ga0495661_0000045 Ga0495661_0000045_58178_59845 536
190 3300046665 Ga0495661_0000144 Ga0495661_0000144_79775_81466 536
191 3300047469 Ga0495673_0000601 Ga0495673_0000601_7031_8716 536
192 3300049459 Ga0495678_007094 Ga0495678_007094_2993_4660 536
193 3300048928 Ga0496125_0004293 Ga0496125_0004293_11040_12665 537
194 3300048928 Ga0496125_0009492 Ga0496125_0009492_941_2566 537
195 3300048928 Ga0496125_0018306 Ga0496125_0018306_3723_5348 537
196 3300003215 JGI25153J46596_10001129 JGI25153J46596_1000112913 538
197 3300003215 JGI25153J46596_10004396 JGI25153J46596_100043963 538
198 3300005983 Ga0081540_1025594 Ga0081540_10255943 538
199 3300006847 Ga0075431_100022312 Ga0075431_1000223125 538
200 3300006880 Ga0075429_100002609 Ga0075429_1000026099 538
201 3300009147 Ga0114129_10020489 Ga0114129_100204895 538
202 3300025297 Ga0209758_1001182 Ga0209758_100118228 538
203 3300028800 Ga0265338_10015274 Ga0265338_100152747 538
204 3300039438 Ga0436360_1377787 Ga0436360_1377787_3598_5250 538
205 3300039447 Ga0436361_0030283 Ga0436361_0030283_2230_3882 538
206 3300046491 Ga0495584_0038092 Ga0495584_0038092_628_2289 538
207 3300046524 Ga0495648_0030495 Ga0495648_0030495_729_2369 538
208 3300046528 Ga0495642_0005562 Ga0495642_0005562_316_1980 538
209 3300046665 Ga0495661_0055329 Ga0495661_0055329_633_2297 538
210 3300048088 Ga0495602_0020672 Ga0495602_0020672_4456_6138 538
211 3300048907 Ga0496104_0004874 Ga0496104_0004874_7791_9446 538
212 3300048908 Ga0496105_0032784 Ga0496105_0032784_1463_3118 538
213 3300048914 Ga0496111_0080138 Ga0496111_0080138_523_2178 538
214 3300048917 Ga0496114_0034558 Ga0496114_0034558_760_2415 538
215 3300048918 Ga0496115_0012045 Ga0496115_0012045_2600_4255 538
216 3300048922 Ga0496119_0012356 Ga0496119_0012356_449_2104 538
217 3300050510 nmdc:mga06r32_23180_c1 nmdc:mga06r32_23180_c1_3286_4947 538
218 3300050515 nmdc:mga0a205_122562_c1 nmdc:mga0a205_122562_c1_402_2066 538
219 3300053125 Ga0500618_001449 Ga0500618_001449_3064_4815 538
220 3300002987 JGI25159J45721_1002219 JGI25159J45721_10022195 539
221 3300003354 JGI25160J50197_1000252 JGI25160J50197_100025215 539
222 3300003374 JGI25161J50226_1000185 JGI25161J50226_100018515 539
223 3300004625 Ga0055543_1000249 Ga0055543_100024915 539
224 3300005262 Ga0065165_1000824 Ga0065165_100082432 539
225 3300005338 Ga0068868_100131840 Ga0068868_1001318402 539
226 3300005355 Ga0070671_100018651 Ga0070671_1000186514 539
227 3300005539 Ga0068853_100001980 Ga0068853_1000019804 539
228 3300005563 Ga0068855_100238446 Ga0068855_1002384462 539
229 3300005577 Ga0068857_100020814 Ga0068857_1000208142 539
230 3300005578 Ga0068854_100062188 Ga0068854_1000621882 539
231 3300009093 Ga0105240_10008017 Ga0105240_1000801710 539
232 3300025208 Ga0209436_103289 Ga0209436_1032895 539
233 3300025913 Ga0207695_10008819 Ga0207695_100088197 539
234 3300025914 Ga0207671_10019633 Ga0207671_100196334 539
235 3300025939 Ga0207665_10006704 Ga0207665_100067042 539
236 3300025949 Ga0207667_10199549 Ga0207667_101995492 539
237 3300026041 Ga0207639_10009334 Ga0207639_100093342 539
238 3300026116 Ga0207674_10046805 Ga0207674_100468054 539
239 3300037418 Ga0395900_0002409 Ga0395900_0002409_7581_9212 539
240 3300037466 Ga0395898_0027358 Ga0395898_0027358_2951_4582 539
241 3300046457 Ga0495590_0018064 Ga0495590_0018064_755_2482 539
242 3300047320 Ga0495672_0004450 Ga0495672_0004450_8968_10644 539
243 3300001989 JGI24739J22299_10009702 JGI24739J22299_100097022 540
244 3300001990 JGI24737J22298_10007481 JGI24737J22298_100074812 540
245 3300002067 JGI24735J21928_10008428 JGI24735J21928_100084282 540
246 3300005539 Ga0068853_100027924 Ga0068853_1000279244 540
247 3300005563 Ga0068855_100031287 Ga0068855_1000312874 540
248 3300005577 Ga0068857_100027901 Ga0068857_1000279013 540
249 3300005578 Ga0068854_100006398 Ga0068854_1000063985 540
250 3300005578 Ga0068854_100025249 Ga0068854_1000252492 540
251 3300005614 Ga0068856_100038616 Ga0068856_1000386164 540
252 3300005616 Ga0068852_100035665 Ga0068852_1000356652 540
253 3300009093 Ga0105240_10040706 Ga0105240_100407063 540
254 3300009174 Ga0105241_10024277 Ga0105241_100242772 540
255 3300009551 Ga0105238_10006040 Ga0105238_1000604011 540
256 3300009551 Ga0105238_10008387 Ga0105238_100083878 540
257 3300010375 Ga0105239_10027256 Ga0105239_100272563 540
258 3300010375 Ga0105239_10260733 Ga0105239_102607331 540
259 3300025904 Ga0207647_10032499 Ga0207647_100324992 540
260 3300025911 Ga0207654_10000937 Ga0207654_100009374 540
261 3300025913 Ga0207695_10000506 Ga0207695_1000050621 540
262 3300025913 Ga0207695_10069751 Ga0207695_100697512 540
263 3300025924 Ga0207694_10000086 Ga0207694_1000008651 540
264 3300025949 Ga0207667_10028034 Ga0207667_100280343 540
265 3300025949 Ga0207667_10057151 Ga0207667_100571511 540
266 3300025981 Ga0207640_10023717 Ga0207640_100237172 540
267 3300025981 Ga0207640_10032606 Ga0207640_100326062 540
268 3300026041 Ga0207639_10014482 Ga0207639_100144822 540
269 3300026067 Ga0207678_10034669 Ga0207678_100346693 540
270 3300026067 Ga0207678_10110013 Ga0207678_101100132 540
271 3300026078 Ga0207702_10000098 Ga0207702_100000984 540
272 3300026078 Ga0207702_10030369 Ga0207702_100303694 540
273 3300026116 Ga0207674_10019802 Ga0207674_100198024 540
274 3300026116 Ga0207674_10034362 Ga0207674_100343622 540
275 3300026142 Ga0207698_10031860 Ga0207698_100318602 540

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00732

GMC_oxred_N

GMC oxidoreductase

12

307

0.97

PF05199

GMC_oxred_C

GMC oxidoreductase

398

533

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bxl-assembly3.cif.gz_E patulin synthase from penicillium expansum 0.9458 6 535
7r36-assembly1.cif.gz_A difference-refined structure of fatty acid photodecarboxylase 2 microsecond following 400-nm laser irradiation of the dark-state determined by sfx 0.945 6 537
6ys1-assembly1.cif.gz_AAA crystal structure of fap r451k mutant in the dark at 100k 0.9413 3 540
6yru-assembly1.cif.gz_AAA crystal structure of fap in the dark at 100k 0.9386 6 534
5oc1-assembly1.cif.gz_A crystal structure of aryl-alcohol oxidase from pleurotus eryngii in complex with p-anisic acid 0.9385 7 534
ID Description Score Start End Superfamily
af_Q6UPE0_47_576_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9686 9 531 3.50.50.60
af_P17444_4_531_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9656 8 530 3.50.50.60
af_Q2FV11_9_533_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.964 8 528 3.50.50.60
af_Q2FV11_9_533_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.955 8 528 3.50.50.60
af_P17444_4_531_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9549 8 530 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A7X2FWC7-F1-model_v4 Choline dehydrogenase 0.9837 5 534 GO:0016614
GO:0050660
AF-A0A660NMZ7-F1-model_v4 Choline dehydrogenase 0.9833 57 538 GO:0016614
GO:0050660
AF-A0A6N8UHS3-F1-model_v4 Choline dehydrogenase 0.9832 6 534 GO:0016614
GO:0050660
AF-A0A520GZI8-F1-model_v4 Choline dehydrogenase 0.9831 163 534 GO:0016614
GO:0050660
AF-A0A261VE04-F1-model_v4 Choline dehydrogenase 0.9828 5 534 GO:0016614
GO:0050660

Feature Viewer

pLDDT pTM Quality
93.05 0.94 High
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Predicted Structure (AlphaFold2)

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