F380081

General Info

Members Datasets Scaffolds Average Seq Length
274 199 192 476

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862993130|2862996651
Length 551
Sequence VESGVGAGAQGHEGEPRLDIQAGTEIEADTGLYDEGVLDPENELQDADLGADLDADLDADPVEDGDEPSAGNRAGAAGALWGGRFAGGPAPELVELSRSTQFDFQLAPYDIAGSIAHARALAEAGYLSRSDRDRMIDALETLLAAVQDGSFLPEPDDEDVHSALERGLMAIAGPELGGKLRAGRSRNDQIATLVRIYLRDHAATIYGLVIQLIDALAAQADANEGVILPGRTHLQHAQPVLLAHHLLAHCWPLVRDLERLRDWDARANVSPYGSGALAGSTLGLDASAVARDLGFARSSENSIDGTAARDVVAEFAYITAQIGIDMSRLAEEIVLWNTKEFGFVRLSDSFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLATLKGLPLAYNRDLQEDKEPVFDSVLTLEVLLPAFTGMIETLEFNAERMAELAPQGYSLATDVAEWLVKQHVSFRDAHEITGELVRFAEERGIELDEVSDDDLLDISPHLTPEVRAVLNVRGSVDSRDGVGGTATNRVAEQLAELTERVRVLGSAPAFGSAQLETRG

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221546 Microbacterium sp. Root53 Isolate Unclassified
4 2643221553 Microbacterium sp. Root553 Isolate Unclassified
5 2643221566 Microbacterium sp. Root166 Isolate Unclassified
6 2643221572 Leifsonia sp. Root60 Isolate Unclassified
7 2643221575 Microbacterium sp. Root61 Isolate Unclassified
8 2643221597 Microbacterium sp. Root180 Isolate Unclassified
9 2643221613 Oerskovia sp. Root22 Isolate Unclassified
10 2643221616 Leifsonia sp. Root227 Isolate Unclassified
11 2643221619 Agromyces sp. Root81 Isolate Unclassified
12 2643221630 Microbacterium sp. Root322 Isolate Unclassified
13 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
14 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
15 2643221721 Oerskovia sp. Root918 Isolate Unclassified
16 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
17 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
18 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
19 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
20 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
21 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
22 2773857759 Microbacterium sp. 1294 Isolate Unclassified
23 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
24 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
25 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
26 2808606372 Agromyces sp. 23-23 Isolate Unclassified
27 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
28 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
29 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
30 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
31 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
32 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
33 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
34 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
35 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
36 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
37 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
38 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
39 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
40 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
41 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
42 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
43 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
44 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
45 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
46 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
47 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
48 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
49 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
50 2919069694 Microbacterium sp. 1154 Isolate Unclassified
51 2919395869 Microbacterium resistens 2980 Isolate Unclassified
52 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
53 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
54 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
55 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
56 2928153084 Leifsonia sp. 563 Isolate Unclassified
57 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
58 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
59 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
60 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
61 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
62 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
63 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
64 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
65 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
66 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
67 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
68 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
69 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
70 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
71 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
72 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
73 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
74 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
75 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
76 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
77 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
78 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
79 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
80 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
81 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
82 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
83 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
84 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
85 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
86 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
87 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
88 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
89 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
90 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
91 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
92 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
93 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
94 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
95 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
96 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
97 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
98 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
99 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
100 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
101 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
102 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
103 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
104 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
110 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
111 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
115 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
128 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
131 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
135 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
136 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
137 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
138 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
144 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
157 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
178 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
179 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
180 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
181 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
182 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
183 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
184 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
188 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
189 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
192 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
193 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
194 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
195 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
196 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
197 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
198 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
199 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.88
Metatranscriptomes 2.19
Isolates 29.93

Biome Distribution

Category Percentage (%)
Aerial Root 1.09
Bulb 0
Endosphere 19.34
Nodule 0
Rhizoplane 4.01
Rhizosphere 40.15
Stem 0
Stem Tuber 0.36
Unclassified 35.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000515 3300002772 Bacteria 18519
2 JGI25165J46597_1000044 3300003214 Bacteria 263289
3 Ga0006562J51391_1012638 3300003578 Bacteria 12050
4 Ga0006562J51391_1012639 3300003578 Bacteria 9730
5 Ga0006562J51391_1038337 3300003578 Bacteria 26740
6 Ga0006562J51391_1038338 3300003578 Bacteria 23521
7 Ga0055539_1000027 3300003752 Bacteria 258020
8 Ga0055533_1000020 3300003756 Bacteria 353998
9 Ga0055525_1000391 3300003759 Bacteria 28026
10 Ga0055525_1001987 3300003759 Bacteria 2544
11 Ga0055542_1000006 3300003762 Bacteria 504776
12 Ga0055529_1000013 3300003763 Bacteria 373267
13 Ga0055541_1003998 3300003841 Bacteria 2717
14 Ga0065714_10078577 3300005288 Bacteria 2581
15 Ga0070658_10013684 3300005327 Bacteria 6509
16 Ga0068869_100051038 3300005334 Bacteria 3000
17 Ga0068853_100104469 3300005539 Bacteria 2508
18 Ga0068857_100015215 3300005577 Bacteria 6714
19 Ga0068856_100083994 3300005614 Bacteria 3163
20 Ga0068852_100024407 3300005616 Bacteria 4885
21 Ga0075365_10088473 3300006038 Bacteria 2107
22 Ga0075364_10016830 3300006051 Bacteria 4555
23 Ga0075364_10017733 3300006051 Bacteria 4452
24 Ga0075364_10018137 3300006051 Bacteria 4403
25 Ga0075364_10117261 3300006051 Bacteria 1780
26 Ga0075367_10043759 3300006178 Bacteria 2622
27 Ga0075369_10011706 3300006186 Bacteria 3455
28 Ga0105248_10003147 3300009177 Bacteria 18262
29 Ga0105237_10020192 3300009545 Bacteria 6875
30 Ga0105238_10093508 3300009551 Bacteria 2995
31 Ga0105239_10036468 3300010375 Bacteria 5399
32 Ga0157369_10072366 3300013105 Bacteria 3700
33 Ga0157369_10111713 3300013105 Bacteria 2904
34 Ga0163162_10182906 3300013306 Bacteria 2222
35 Ga0157372_10246569 3300013307 Bacteria 2073
36 Ga0163163_10009670 3300014325 Bacteria 8626
37 Ga0206354_10667502 3300020081 Bacteria 3718
38 Ga0206353_11755581 3300020082 Bacteria 6045
39 Ga0209566_100366 3300025225 Bacteria 37636
40 Ga0209674_100001 3300025226 Bacteria 4013750
41 Ga0209672_100003 3300025228 Bacteria 1560476
42 Ga0209147_100900 3300025229 Bacteria 13505
43 Ga0209563_100001 3300025230 Bacteria 4013775
44 Ga0209563_100323 3300025230 Bacteria 18797
45 Ga0207427_100126 3300025231 Bacteria 95170
46 Ga0209437_100585 3300025233 Bacteria 23238
47 Ga0209258_102361 3300025242 Bacteria 4977
48 Ga0209677_100001 3300025253 Bacteria 4013787
49 Ga0209677_100957 3300025253 Bacteria 14044
50 Ga0209148_1000004 3300025254 Bacteria 1844481
51 Ga0209233_1000014 3300025261 Bacteria 996641
52 Ga0209455_1000022 3300025272 Bacteria 688910
53 Ga0207656_10000001 3300025321 Bacteria 1323684
54 Ga0207656_10000003 3300025321 Bacteria 771644
55 Ga0207647_10026372 3300025904 Bacteria 3803
56 Ga0207643_10056709 3300025908 Bacteria 2228
57 Ga0207705_10147894 3300025909 Bacteria 1759
58 Ga0207671_10000001 3300025914 Bacteria 1318881
59 Ga0207694_10005422 3300025924 Bacteria 9817
60 Ga0207711_10001834 3300025941 Bacteria 19368
61 Ga0207668_10122428 3300025972 Bacteria 1972
62 Ga0207678_10123295 3300026067 Bacteria 2211
63 Ga0207674_10009940 3300026116 Bacteria 10823
64 Ga0207698_10003180 3300026142 Bacteria 9852
65 Ga0209974_10013844 3300027876 Bacteria 2687
66 Ga0307514_10004273 3300031649 Bacteria 13198
67 Ga0307406_10002073 3300031901 Bacteria 10945
68 Ga0307406_10015728 3300031901 Bacteria 4384
69 Ga0307406_10016756 3300031901 Bacteria 4263
70 Ga0307406_10074698 3300031901 Bacteria 2233
71 Ga0307409_100034955 3300031995 Bacteria 3678
72 Ga0307416_100073736 3300032002 Bacteria 2848
73 Ga0395899_0021021 3300037312 Bacteria 4949
74 Ga0395898_0000098 3300037466 Bacteria 229806
75 Ga0395898_0123516 3300037466 Bacteria 2481
76 Ga0395898_0260522 3300037466 Bacteria 1654
77 Ga0400485_07745 3300038735 Bacteria 24721
78 Ga0400488_35085 3300038741 Bacteria 3260
79 Ga0400486_04200 3300038742 Bacteria 58211
80 Ga0466965_0000002 3300044683 Bacteria 297957
81 Ga0466965_0029680 3300044683 Bacteria 2661
82 Ga0466965_0041989 3300044683 Bacteria 2254
83 Ga0466961_0011993 3300044693 Bacteria 5540
84 Ga0466970_0020146 3300044765 Bacteria 3462
85 Ga0466967_0122397 3300045976 Bacteria 2406
86 Ga0495627_001195 3300046453 Bacteria 16382
87 Ga0495686_0037379 3300047472 Bacteria 3111
88 Ga0495626_0045773 3300048091 Bacteria 2041
89 Ga0496100_0068413 3300048903 Bacteria 2361
90 Ga0496101_0009383 3300048904 Bacteria 6430
91 Ga0496102_0126742 3300048905 Bacteria 2387
92 Ga0496103_0020958 3300048906 Bacteria 3930
93 Ga0496103_0055828 3300048906 Bacteria 2450
94 Ga0496105_0090541 3300048908 Bacteria 2526
95 Ga0496107_0038463 3300048910 Bacteria 3432
96 Ga0496110_0057297 3300048913 Bacteria 3430
97 Ga0496113_0015705 3300048916 Bacteria 5214
98 Ga0496114_0010224 3300048917 Bacteria 7466
99 Ga0496115_0020283 3300048918 Bacteria 5126
100 Ga0496117_0000028 3300048920 Bacteria 407392
101 Ga0496117_0001238 3300048920 Bacteria 38206
102 Ga0496117_0002301 3300048920 Bacteria 24585
103 Ga0496117_0042147 3300048920 Bacteria 3334
104 Ga0496117_0046485 3300048920 Bacteria 3121
105 Ga0496117_0047563 3300048920 Bacteria 3074
106 Ga0496118_0000398 3300048921 Bacteria 73344
107 Ga0496118_0005437 3300048921 Bacteria 14479
108 Ga0496118_0017504 3300048921 Bacteria 6519
109 Ga0496118_0022772 3300048921 Bacteria 5462
110 Ga0496119_0004177 3300048922 Bacteria 14507
111 Ga0496119_0004257 3300048922 Bacteria 14346
112 Ga0496119_0009915 3300048922 Bacteria 8086
113 Ga0496119_0018886 3300048922 Bacteria 5106
114 Ga0496119_0040707 3300048922 Bacteria 2969
115 Ga0496119_0057420 3300048922 Bacteria 2351
116 Ga0496119_0060866 3300048922 Bacteria 2258
117 Ga0496120_0000975 3300048923 Bacteria 38985
118 Ga0496120_0007489 3300048923 Bacteria 8107
119 Ga0496120_0094154 3300048923 Bacteria 1595
120 Ga0496121_0000277 3300048924 Bacteria 107014
121 Ga0496121_0032572 3300048924 Bacteria 4735
122 Ga0496122_0000036 3300048925 Bacteria 312598
123 Ga0496122_0000055 3300048925 Bacteria 258485
124 Ga0496122_0005719 3300048925 Bacteria 14656
125 Ga0496122_0006665 3300048925 Bacteria 13156
126 Ga0496122_0008196 3300048925 Bacteria 11354
127 Ga0496122_0008820 3300048925 Bacteria 10769
128 Ga0496122_0013819 3300048925 Bacteria 7862
129 Ga0496122_0030431 3300048925 Bacteria 4522
130 Ga0496123_0000003 3300048926 Bacteria 866556
131 Ga0496123_0000011 3300048926 Bacteria 493925
132 Ga0496123_0002201 3300048926 Bacteria 24786
133 Ga0496123_0014689 3300048926 Bacteria 6472
134 Ga0496123_0036573 3300048926 Bacteria 3480
135 Ga0496124_0000198 3300048927 Bacteria 119277
136 Ga0496124_0007194 3300048927 Bacteria 11896
137 Ga0496124_0016603 3300048927 Bacteria 6987
138 Ga0496124_0058453 3300048927 Bacteria 3243
139 Ga0496125_0000473 3300048928 Bacteria 71177
140 Ga0496125_0001414 3300048928 Bacteria 35032
141 Ga0496125_0006599 3300048928 Bacteria 12493
142 Ga0496125_0017761 3300048928 Bacteria 6771
143 Ga0496125_0031772 3300048928 Bacteria 4699
144 Ga0496125_0050822 3300048928 Bacteria 3427
145 Ga0496126_0007012 3300048929 Bacteria 12438
146 Ga0496126_0021881 3300048929 Bacteria 6237
147 Ga0496126_0029087 3300048929 Bacteria 5252
148 Ga0501034_0000699 3300049571 Bacteria 50906
149 Ga0501034_0080618 3300049571 Bacteria 3258
150 Ga0501038_0009585 3300049574 Bacteria 8883
151 Ga0501039_0155357 3300049575 Bacteria 1797
152 Ga0501043_0052392 3300049579 Bacteria 3205
153 Ga0501043_0131908 3300049579 Bacteria 1958
154 Ga0501046_0006220 3300049580 Bacteria 10599
155 Ga0501047_0013070 3300049581 Bacteria 7863
156 Ga0501047_0027020 3300049581 Bacteria 5528
157 Ga0501070_0000044 3300049586 Bacteria 108859
158 Ga0501070_0001749 3300049586 Bacteria 19203
159 Ga0501070_0035851 3300049586 Bacteria 4143
160 Ga0501070_0073472 3300049586 Bacteria 2830
161 Ga0501070_0091721 3300049586 Bacteria 2514
162 Ga0501073_0000024 3300049589 Bacteria 128851
163 Ga0501080_0006153 3300049742 Bacteria 10769
164 Ga0501083_0000056 3300049744 Bacteria 82115
165 Ga0501083_0020097 3300049744 Bacteria 4647
166 Ga0501035_0008164 3300049822 Bacteria 9755
167 Ga0501035_0016354 3300049822 Bacteria 6842
168 Ga0501035_0069779 3300049822 Bacteria 3114
169 Ga0501044_0015647 3300049823 Bacteria 8170
170 nmdc:mga00v17_31482_c1 3300050491 Bacteria 3128
171 nmdc:mga0yw44_39760_c1 3300050492 Bacteria 2791
172 nmdc:mga06z11_9687_c1 3300050494 Bacteria 4069
173 nmdc:mga0sz30_9479_c1 3300050516 Bacteria 3707
174 Ga0500635_0000027 3300053080 Bacteria 104865
175 Ga0500643_000189 3300053087 Bacteria 58813
176 Ga0500651_0001689 3300053093 Bacteria 11274
177 Ga0500556_0000062 3300053104 Bacteria 110818
178 Ga0500556_0000538 3300053104 Bacteria 25802
179 Ga0500593_000778 3300053117 Bacteria 11894
180 Ga0500559_0000817 3300053136 Bacteria 20217
181 Ga0500559_0000868 3300053136 Bacteria 19392
182 Ga0500568_0000060 3300053139 Bacteria 107901
183 Ga0500568_0000075 3300053139 Bacteria 94413
184 Ga0500568_0018611 3300053139 Bacteria 3035
185 Ga0500573_0000007 3300053140 Bacteria 272970
186 Ga0500573_0003407 3300053140 Bacteria 8221
187 Ga0500573_0007916 3300053140 Bacteria 5831
188 Ga0500573_0016095 3300053140 Bacteria 4243
189 Ga0500573_0029945 3300053140 Bacteria 3139
190 Ga0500588_0008873 3300053146 Bacteria 2368
191 Ga0500590_001918 3300053148 Bacteria 8895
192 Ga0500616_0002004 3300053153 Bacteria 18042

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048924 Ga0496121_0000277 Ga0496121_0000277_96080_97492 441
2 3300049586 Ga0501070_0073472 Ga0501070_0073472_960_2378 441
3 3300053139 Ga0500568_0000075 Ga0500568_0000075_80526_81932 445
4 3300053139 Ga0500568_0018611 Ga0500568_0018611_1558_2940 448
5 3300031649 Ga0307514_10004273 Ga0307514_100042737 449
6 3300038735 Ga0400485_07745 Ga0400485_07745_16195_17592 454
7 3300038742 Ga0400486_04200 Ga0400486_04200_50287_51684 454
8 3300049581 Ga0501047_0027020 Ga0501047_0027020_1085_2503 455
9 3300049822 Ga0501035_0008164 Ga0501035_0008164_7372_8790 455
10 3300049579 Ga0501043_0131908 Ga0501043_0131908_93_1577 460
11 3300048922 Ga0496119_0004177 Ga0496119_0004177_5616_7052 461
12 3300053153 Ga0500616_0002004 Ga0500616_0002004_5548_6942 463
13 3300053146 Ga0500588_0008873 Ga0500588_0008873_589_1986 464
14 iso_pu_bacteria 2857737099 2857740181 465
15 3300009177 Ga0105248_10003147 Ga0105248_100031477 466
16 3300014325 Ga0163163_10009670 Ga0163163_100096707 466
17 3300025941 Ga0207711_10001834 Ga0207711_1000183411 466
18 3300048927 Ga0496124_0058453 Ga0496124_0058453_294_1724 466
19 3300049571 Ga0501034_0080618 Ga0501034_0080618_115_1515 466
20 3300049579 Ga0501043_0052392 Ga0501043_0052392_47_1447 466
21 3300049586 Ga0501070_0091721 Ga0501070_0091721_123_1526 466
22 3300049589 Ga0501073_0000024 Ga0501073_0000024_10682_12085 466
23 3300049742 Ga0501080_0006153 Ga0501080_0006153_6404_7804 466
24 3300049744 Ga0501083_0020097 Ga0501083_0020097_459_1859 466
25 3300053093 Ga0500651_0001689 Ga0500651_0001689_1820_3220 466
26 3300053148 Ga0500590_001918 Ga0500590_001918_6004_7404 466
27 3300044683 Ga0466965_0029680 Ga0466965_0029680_361_1881 467
28 3300048918 Ga0496115_0020283 Ga0496115_0020283_2699_4153 467
29 3300006051 Ga0075364_10117261 Ga0075364_101172612 468
30 3300031901 Ga0307406_10016756 Ga0307406_100167562 468
31 3300048925 Ga0496122_0008196 Ga0496122_0008196_2666_4096 468
32 3300048928 Ga0496125_0031772 Ga0496125_0031772_2501_3931 468
33 3300050492 nmdc:mga0yw44_39760_c1 nmdc:mga0yw44_39760_c1_270_1679 468
34 3300050516 nmdc:mga0sz30_9479_c1 nmdc:mga0sz30_9479_c1_598_2007 468
35 3300053104 Ga0500556_0000538 Ga0500556_0000538_8683_10092 468
36 3300053117 Ga0500593_000778 Ga0500593_000778_8561_9970 468
37 3300053136 Ga0500559_0000817 Ga0500559_0000817_16895_18304 468
38 iso_pu_bacteria 2995726249 2995728726 468
39 iso_pu_bacteria 8055034563 8055035093 468
40 3300025909 Ga0207705_10147894 Ga0207705_101478942 469
41 3300048922 Ga0496119_0057420 Ga0496119_0057420_142_1554 469
42 3300048925 Ga0496122_0005719 Ga0496122_0005719_1604_3052 469
43 3300048926 Ga0496123_0036573 Ga0496123_0036573_776_2224 469
44 iso_pu_bacteria 8002811521 8002813638 469
45 iso_pu_bacteria 8004212874 8004214484 469
46 3300027876 Ga0209974_10013844 Ga0209974_100138442 470
47 3300047472 Ga0495686_0037379 Ga0495686_0037379_1461_2876 470
48 3300048925 Ga0496122_0008820 Ga0496122_0008820_5552_6970 470
49 3300048926 Ga0496123_0002201 Ga0496123_0002201_5478_6896 470
50 3300053104 Ga0500556_0000062 Ga0500556_0000062_102274_103689 470
51 3300053139 Ga0500568_0000060 Ga0500568_0000060_103239_104654 470
52 iso_pu_bacteria 2852643534 2852645252 470
53 iso_pu_bacteria 2946033335 2946037009 470
54 3300005577 Ga0068857_100015215 Ga0068857_1000152157 471
55 3300005616 Ga0068852_100024407 Ga0068852_1000244076 471
56 3300009545 Ga0105237_10020192 Ga0105237_100201927 471
57 3300009551 Ga0105238_10093508 Ga0105238_100935082 471
58 3300010375 Ga0105239_10036468 Ga0105239_100364687 471
59 3300013306 Ga0163162_10182906 Ga0163162_101829062 471
60 3300025321 Ga0207656_10000001 Ga0207656_1000000111 471
61 3300025321 Ga0207656_10000003 Ga0207656_10000003117 471
62 3300025914 Ga0207671_10000001 Ga0207671_100000019 471
63 3300025924 Ga0207694_10005422 Ga0207694_100054224 471
64 3300026116 Ga0207674_10009940 Ga0207674_100099406 471
65 3300026142 Ga0207698_10003180 Ga0207698_100031806 471
66 3300038741 Ga0400488_35085 Ga0400488_35085_717_2165 471
67 3300048913 Ga0496110_0057297 Ga0496110_0057297_500_1957 471
68 3300048916 Ga0496113_0015705 Ga0496113_0015705_2355_3830 471
69 3300053087 Ga0500643_000189 Ga0500643_000189_28703_30136 471
70 iso_pu_bacteria 2833709550 2833710512 471
71 iso_pu_bacteria 2857733635 2857736652 471
72 3300044765 Ga0466970_0020146 Ga0466970_0020146_892_2316 472
73 iso_pu_bacteria 2585428157 2588106537 472
74 iso_pu_bacteria 2643221542 2643735141 472
75 iso_pu_bacteria 2643221553 2643786790 472
76 iso_pu_bacteria 2643221566 2643849604 472
77 iso_pu_bacteria 2643221575 2643888755 472
78 iso_pu_bacteria 2643221597 2643996167 472
79 iso_pu_bacteria 2643221630 2644173303 472
80 iso_pu_bacteria 2643221724 2644681463 472
81 iso_pu_bacteria 2728369380 2730230099 472
82 iso_pu_bacteria 2747842429 2747953499 472
83 iso_pu_bacteria 2773857758 2774381525 472
84 iso_pu_bacteria 2773857759 2774383424 472
85 iso_pu_bacteria 2773857763 2774399955 472
86 iso_pu_bacteria 2808606306 2808631539 472
87 iso_pu_bacteria 2808606368 2808885279 472
88 iso_pu_bacteria 2811994872 2812322676 472
89 iso_pu_bacteria 2821268502 2821269597 472
90 iso_pu_bacteria 2852646457 2852649633 472
91 iso_pu_bacteria 2852663356 2852665541 472
92 iso_pu_bacteria 2857720070 2857720456 472
93 iso_pu_bacteria 2857723135 2857725096 472
94 iso_pu_bacteria 2870628048 2870629943 472
95 iso_pu_bacteria 2904509784 2904509788 472
96 iso_pu_bacteria 2908678064 2908678996 472
97 iso_pu_bacteria 2919069694 2919071344 472
98 iso_pu_bacteria 2928090899 2928092453 472
99 iso_pu_bacteria 2945968032 2945968282 472
100 iso_pu_bacteria 2946041624 2946044741 472
101 iso_pu_bacteria 2946080515 2946084634 472
102 iso_pu_bacteria 2974294766 2974297812 472
103 iso_pu_bacteria 2974324384 2974325953 472
104 iso_pu_bacteria 2977236895 2977239698 472
105 iso_pu_bacteria 2977264416 2977266131 472
106 iso_pu_bacteria 2984542743 2984546030 472
107 iso_pu_bacteria 2984580707 2984580774 472
108 iso_pu_bacteria 8004182704 8004185634 472
109 iso_pu_bacteria 8016254467 8016254474 472
110 iso_pu_bacteria 8045830549 8045831240 472
111 iso_pu_bacteria 8046352972 8046356085 472
112 3300048923 Ga0496120_0094154 Ga0496120_0094154_88_1512 473
113 3300048925 Ga0496122_0000036 Ga0496122_0000036_5991_7427 473
114 3300048926 Ga0496123_0000011 Ga0496123_0000011_6067_7503 473
115 3300048927 Ga0496124_0007194 Ga0496124_0007194_2774_4210 473
116 3300048928 Ga0496125_0017761 Ga0496125_0017761_2256_3692 473
117 3300053140 Ga0500573_0000007 Ga0500573_0000007_266175_267596 473
118 3300053140 Ga0500573_0003407 Ga0500573_0003407_3478_4902 473
119 3300053140 Ga0500573_0029945 Ga0500573_0029945_82_1506 473
120 iso_pu_bacteria 2643221572 2643877925 473
121 iso_pu_bacteria 2643221669 2644384980 473
122 iso_pu_bacteria 2919395869 2919395869 473
123 iso_pu_bacteria 2919443155 2919443159 473
124 3300044683 Ga0466965_0000002 Ga0466965_0000002_6245_7693 474
125 iso_pu_bacteria 2721755702 2723642578 474
126 3300003578 Ga0006562J51391_1038337 Ga0006562J51391_103833713 475
127 3300003578 Ga0006562J51391_1038338 Ga0006562J51391_103833817 475
128 3300006051 Ga0075364_10018137 Ga0075364_100181373 475
129 3300048091 Ga0495626_0045773 Ga0495626_0045773_281_1717 475
130 3300048920 Ga0496117_0042147 Ga0496117_0042147_488_1957 475
131 3300053140 Ga0500573_0007916 Ga0500573_0007916_1932_3362 475
132 iso_pu_bacteria 2643221546 2643754238 475
133 3300003578 Ga0006562J51391_1012638 Ga0006562J51391_10126388 476
134 3300003578 Ga0006562J51391_1012639 Ga0006562J51391_10126396 476
135 3300006038 Ga0075365_10088473 Ga0075365_100884732 476
136 3300006051 Ga0075364_10016830 Ga0075364_100168302 476
137 3300006051 Ga0075364_10017733 Ga0075364_100177335 476
138 3300006178 Ga0075367_10043759 Ga0075367_100437592 476
139 3300006186 Ga0075369_10011706 Ga0075369_100117063 476
140 3300013105 Ga0157369_10072366 Ga0157369_100723663 476
141 3300013307 Ga0157372_10246569 Ga0157372_102465691 476
142 3300031901 Ga0307406_10002073 Ga0307406_100020734 476
143 3300031901 Ga0307406_10015728 Ga0307406_100157283 476
144 3300031901 Ga0307406_10074698 Ga0307406_100746982 476
145 3300032002 Ga0307416_100073736 Ga0307416_1000737363 476
146 3300037466 Ga0395898_0260522 Ga0395898_0260522_137_1570 476
147 3300045976 Ga0466967_0122397 Ga0466967_0122397_226_1677 476
148 3300046453 Ga0495627_001195 Ga0495627_001195_2980_4410 476
149 3300048920 Ga0496117_0000028 Ga0496117_0000028_401973_403403 476
150 3300048920 Ga0496117_0001238 Ga0496117_0001238_1959_3389 476
151 3300048920 Ga0496117_0046485 Ga0496117_0046485_1452_2882 476
152 3300048921 Ga0496118_0005437 Ga0496118_0005437_2593_4023 476
153 3300048921 Ga0496118_0017504 Ga0496118_0017504_1740_3170 476
154 3300048922 Ga0496119_0004257 Ga0496119_0004257_2516_3946 476
155 3300048922 Ga0496119_0009915 Ga0496119_0009915_4589_6019 476
156 3300048923 Ga0496120_0000975 Ga0496120_0000975_20269_21699 476
157 3300048923 Ga0496120_0007489 Ga0496120_0007489_5497_6927 476
158 3300048924 Ga0496121_0032572 Ga0496121_0032572_1783_3276 476
159 3300048925 Ga0496122_0000055 Ga0496122_0000055_237241_238671 476
160 3300048925 Ga0496122_0006665 Ga0496122_0006665_4408_5838 476
161 3300048925 Ga0496122_0013819 Ga0496122_0013819_4896_6326 476
162 3300048926 Ga0496123_0000003 Ga0496123_0000003_854066_855496 476
163 3300048926 Ga0496123_0014689 Ga0496123_0014689_2586_4016 476
164 3300048927 Ga0496124_0016603 Ga0496124_0016603_1081_2511 476
165 3300048928 Ga0496125_0000473 Ga0496125_0000473_62855_64285 476
166 3300048928 Ga0496125_0001414 Ga0496125_0001414_27967_29397 476
167 3300048928 Ga0496125_0006599 Ga0496125_0006599_3600_5030 476
168 3300048928 Ga0496125_0050822 Ga0496125_0050822_1736_3166 476
169 3300048929 Ga0496126_0007012 Ga0496126_0007012_4354_5784 476
170 3300048929 Ga0496126_0021881 Ga0496126_0021881_2585_4015 476
171 3300048929 Ga0496126_0029087 Ga0496126_0029087_2791_4221 476
172 3300049571 Ga0501034_0000699 Ga0501034_0000699_2808_4238 476
173 3300049575 Ga0501039_0155357 Ga0501039_0155357_82_1512 476
174 3300050491 nmdc:mga00v17_31482_c1 nmdc:mga00v17_31482_c1_296_1726 476
175 3300050494 nmdc:mga06z11_9687_c1 nmdc:mga06z11_9687_c1_428_1858 476
176 iso_pu_bacteria 2643221690 2644506431 476
177 iso_pu_bacteria 2844852863 2844854913 476
178 iso_pu_bacteria 8056037122 8056038817 476
179 3300048905 Ga0496102_0126742 Ga0496102_0126742_237_1739 477
180 3300049586 Ga0501070_0001749 Ga0501070_0001749_13772_15214 477
181 iso_pu_bacteria 2643221613 2644081656 477
182 iso_pu_bacteria 2643221721 2644665301 477
183 iso_pu_bacteria 2808606372 2808902554 477
184 iso_pu_bacteria 2904430863 2904431482 477
185 iso_pu_bacteria 2904501621 2904504808 477
186 iso_pu_bacteria 2908674828 2908676375 477
187 iso_pu_bacteria 2909074476 2909077261 477
188 iso_pu_bacteria 2919039151 2919042126 477
189 iso_pu_bacteria 2928500415 2928503229 477
190 iso_pu_bacteria 2935890801 2935894724 477
191 3300005288 Ga0065714_10078577 Ga0065714_100785772 478
192 3300005327 Ga0070658_10013684 Ga0070658_100136842 478
193 3300005539 Ga0068853_100104469 Ga0068853_1001044692 478
194 3300048906 Ga0496103_0020958 Ga0496103_0020958_2112_3551 478
195 iso_pu_bacteria 2751185788 2753303406 478
196 iso_pu_bacteria 2919042368 2919046181 478
197 iso_pu_bacteria 2928104781 2928106967 478
198 iso_pu_bacteria 2984551494 2984551710 478
199 3300026067 Ga0207678_10123295 Ga0207678_101232952 479
200 3300048922 Ga0496119_0060866 Ga0496119_0060866_532_1971 479
201 3300053136 Ga0500559_0000868 Ga0500559_0000868_16048_17529 479
202 iso_pu_bacteria 2643221619 2644113910 479
203 3300048920 Ga0496117_0002301 Ga0496117_0002301_20515_21966 480
204 3300048921 Ga0496118_0000398 Ga0496118_0000398_69274_70725 480
205 3300048922 Ga0496119_0018886 Ga0496119_0018886_1661_3112 480
206 3300048922 Ga0496119_0040707 Ga0496119_0040707_171_1622 480
207 3300048925 Ga0496122_0030431 Ga0496122_0030431_2199_3650 480
208 3300048927 Ga0496124_0000198 Ga0496124_0000198_115109_116560 480
209 3300049574 Ga0501038_0009585 Ga0501038_0009585_546_2027 480
210 iso_pu_bacteria 2844841374 2844841627 480
211 3300031995 Ga0307409_100034955 Ga0307409_1000349552 481
212 3300037466 Ga0395898_0000098 Ga0395898_0000098_202448_203896 481
213 3300049586 Ga0501070_0000044 Ga0501070_0000044_78793_80241 481
214 3300049744 Ga0501083_0000056 Ga0501083_0000056_76927_78372 481
215 3300049822 Ga0501035_0016354 Ga0501035_0016354_3179_4627 481
216 iso_pu_bacteria 2935409751 2935413260 481
217 3300003759 Ga0055525_1001987 Ga0055525_10019872 482
218 3300025230 Ga0209563_100323 Ga0209563_1003232 482
219 3300049580 Ga0501046_0006220 Ga0501046_0006220_7339_8787 482
220 3300049581 Ga0501047_0013070 Ga0501047_0013070_5227_6675 482
221 3300049586 Ga0501070_0035851 Ga0501070_0035851_1051_2499 482
222 3300049822 Ga0501035_0069779 Ga0501035_0069779_1158_2606 482
223 3300049823 Ga0501044_0015647 Ga0501044_0015647_5254_6702 482
224 3300053080 Ga0500635_0000027 Ga0500635_0000027_75733_77181 482
225 3300005334 Ga0068869_100051038 Ga0068869_1000510382 483
226 3300005614 Ga0068856_100083994 Ga0068856_1000839944 483
227 3300013105 Ga0157369_10111713 Ga0157369_101117134 483
228 3300020081 Ga0206354_10667502 Ga0206354_106675023 483
229 3300020082 Ga0206353_11755581 Ga0206353_117555816 483
230 3300025253 Ga0209677_100957 Ga0209677_1009577 483
231 3300025908 Ga0207643_10056709 Ga0207643_100567091 483
232 3300025972 Ga0207668_10122428 Ga0207668_101224282 483
233 3300037312 Ga0395899_0021021 Ga0395899_0021021_3114_4565 483
234 3300037466 Ga0395898_0123516 Ga0395898_0123516_1006_2457 483
235 3300044693 Ga0466961_0011993 Ga0466961_0011993_1108_2562 483
236 3300053140 Ga0500573_0016095 Ga0500573_0016095_1599_3050 483
237 iso_pu_bacteria 2919523602 2919523631 483
238 iso_pu_bacteria 2928153084 2928155059 483
239 3300003752 Ga0055539_1000027 Ga0055539_100002759 484
240 3300003756 Ga0055533_1000020 Ga0055533_100002059 484
241 3300003759 Ga0055525_1000391 Ga0055525_10003917 484
242 3300003762 Ga0055542_1000006 Ga0055542_1000006333 484
243 3300003763 Ga0055529_1000013 Ga0055529_1000013242 484
244 3300003841 Ga0055541_1003998 Ga0055541_10039982 484
245 3300025225 Ga0209566_100366 Ga0209566_10036630 484
246 3300025226 Ga0209674_100001 Ga0209674_1000013839 484
247 3300025228 Ga0209672_100003 Ga0209672_100003676 484
248 3300025229 Ga0209147_100900 Ga0209147_1009007 484
249 3300025230 Ga0209563_100001 Ga0209563_1000013839 484
250 3300025242 Ga0209258_102361 Ga0209258_1023614 484
251 3300025253 Ga0209677_100001 Ga0209677_1000013839 484
252 3300025254 Ga0209148_1000004 Ga0209148_1000004971 484
253 3300025272 Ga0209455_1000022 Ga0209455_100002212 484
254 3300025904 Ga0207647_10026372 Ga0207647_100263725 484
255 3300044683 Ga0466965_0041989 Ga0466965_0041989_349_1812 484
256 3300048903 Ga0496100_0068413 Ga0496100_0068413_457_1914 484
257 3300048904 Ga0496101_0009383 Ga0496101_0009383_211_1668 484
258 3300048906 Ga0496103_0055828 Ga0496103_0055828_126_1583 484
259 3300048908 Ga0496105_0090541 Ga0496105_0090541_572_2029 484
260 3300048910 Ga0496107_0038463 Ga0496107_0038463_710_2167 484
261 3300048917 Ga0496114_0010224 Ga0496114_0010224_3849_5306 484
262 3300048920 Ga0496117_0047563 Ga0496117_0047563_1517_2986 484
263 3300048921 Ga0496118_0022772 Ga0496118_0022772_1483_2952 484
264 iso_pu_bacteria 2643221616 2644095149 484
265 iso_pu_bacteria 2884763398 2884764546 484
266 iso_pu_bacteria 2966924647 2966927683 484
267 iso_pu_bacteria 8055037949 8055039227 485
268 iso_pu_bacteria 2964326757 2964327017 487
269 3300002772 JGI25164J39214_1000515 JGI25164J39214_100051512 488
270 3300003214 JGI25165J46597_1000044 JGI25165J46597_100004452 488
271 3300025231 Ga0207427_100126 Ga0207427_10012647 488
272 3300025233 Ga0209437_100585 Ga0209437_10058523 488
273 3300025261 Ga0209233_1000014 Ga0209233_100001451 488
274 iso_pu_bacteria 2862993130 2862996651 488

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14698

ASL_C2

Argininosuccinate lyase C-terminal

441

509

0.98

PF00206

Lyase_1

Lyase

83

378

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ig5-assembly1.cif.gz_A crystal structure of argininosuccinate lyase from mycobacterium tuberculosis 0.9672 28 480
6ien-assembly1.cif.gz_C substrate/product bound argininosuccinate lyase from mycobacterium tuberculosis 0.965 29 481
6iem-assembly1.cif.gz_C argininosuccinate lyase from mycobacterium tuberculosis 0.9646 29 480
1tju-assembly1.cif.gz_D crystal structure of t161s duck delta 2 crystallin mutant 0.9643 29 478
6ien-assembly1.cif.gz_D substrate/product bound argininosuccinate lyase from mycobacterium tuberculosis 0.964 29 481
ID Description Score Start End Superfamily
6iemG02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9694 138 476 1.20.200.10
af_F1RA91_25_108_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9675 37 119 1.10.275.10
6iemG03 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase Protein R1; domain 1;Fumarase/aspartase (C-terminal domain) 0.9621 382 448 1.10.40.30
6igaA03 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase Protein R1; domain 1;Fumarase/aspartase (C-terminal domain) 0.9615 382 448 1.10.40.30
1auwA02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9598 139 476 1.20.200.10
ID Description Score Start End GO Terms
AF-A0A7K0SK92-F1-model_v4 Argininosuccinate lyase 0.9745 18 166 GO:0004056
GO:0005829
GO:0042450
AF-A0A0F4EQV8-F1-model_v4 Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase) 0.9655 18 481 GO:0004056
GO:0005829
GO:0006526
GO:0042450
AF-A0A6A8LQB8-F1-model_v4 Argininosuccinate lyase (EC 4.3.2.1) 0.9647 53 392 GO:0004056
GO:0005829
GO:0006526
GO:0042450
AF-X1JAQ3-F1-model_v4 Fumarate lyase N-terminal domain-containing protein 0.9636 97 313 GO:0004056
GO:0005829
GO:0042450
AF-A0A4R5X310-F1-model_v4 Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase) 0.9635 14 480 GO:0004056
GO:0005829
GO:0006526
GO:0042450

Feature Viewer

pLDDT pTM Quality
87.55 0.88 High
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Predicted Structure (AlphaFold2)

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