F380033

General Info

Members Datasets Scaffolds Average Seq Length
274 141 273 482

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_126656_c1|nmdc:mga05p37_126656_c1_1070_2743
Length 542
Sequence MVPILGPRPRRGKRRQENATEPGELRRTIDTIGGESGLRELPAGSDSRTKDRREGRLAMEGSTPTTSSDQGLAREAIGLREVFFQSVTHMAPAAAVAFSIIVGANFASGALPLSVIFALVGCLLVAISIGQLAKHLPSAGGFYTYTARGIHPSVGFLVAWGYAFVEPLVAPALFLIFGQVVAGTLDTEFGWSFSTLGFYGIQISTRVGTLLGLFEIGVFTALAIWLIVDAGSDNTLKVFGTSFATVPTFEGLSGVVAGSVYTILAFIGFEAAAPLAEEARDPRRTIGRAVILSCIGIGIFYIVTTYAAVVYFGPSKFFQFPMFGGGNPWDALARAAWGAGWVLVFLAIANSAIANSNAGSNAATRTWFAMGRIHLLPAMLGRTHPRYRSPHVAVFVQFVIGVSVALWLGAQYNSPFLAFAILGTIIGAVVIAIYMTVNLACLLYYVRHQRDEFNWFLHGVIPILGIAAFVPAFLVAIGVGGSIFDFVSKLPYPFSVVGPVVGIWYLLGIAYLIYLYARKPQRIKDTARVFIEEEAAEVSAPI

Samples

Sample ID Description Type Environment
1 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
55 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
71 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
72 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
73 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
74 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
75 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
76 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
79 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
80 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
81 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
82 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
87 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
96 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
97 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
98 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
99 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
100 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
101 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
102 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
131 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
132 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
133 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
134 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
135 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
136 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
141 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.65
Nodule 0
Rhizoplane 6.57
Rhizosphere 86.13
Stem 0
Stem Tuber 0
Unclassified 3.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10007658 3300002459 Bacteria 2207
2 JGI25406J46586_10027746 3300003203 Bacteria 2166
3 JGI25407J50210_10022275 3300003373 Bacteria 1647
4 Ga0070670_100014765 3300005331 Bacteria 6704
5 Ga0070670_100026988 3300005331 Bacteria 4940
6 Ga0070668_100000201 3300005347 Bacteria 39161
7 Ga0070675_100017669 3300005354 Bacteria 5672
8 Ga0070714_100000722 3300005435 Bacteria 23444
9 Ga0070701_10062278 3300005438 Bacteria 1970
10 Ga0070694_100004286 3300005444 Bacteria 8583
11 Ga0070708_100000572 3300005445 Bacteria 27610
12 Ga0070708_100007846 3300005445 Bacteria 8548
13 Ga0070708_100054179 3300005445 Unclassified 3561
14 Ga0070706_100010134 3300005467 Bacteria 8760
15 Ga0070706_100017896 3300005467 Bacteria 6538
16 Ga0070706_100065531 3300005467 Bacteria 3360
17 Ga0070707_100002851 3300005468 Bacteria 16455
18 Ga0070707_100119336 3300005468 Bacteria 2560
19 Ga0070707_100123545 3300005468 Unclassified 2514
20 Ga0070707_100147404 3300005468 Bacteria 2290
21 Ga0070698_100001292 3300005471 Bacteria 27926
22 Ga0070698_100026278 3300005471 Bacteria 6061
23 Ga0070698_100034917 3300005471 Bacteria 5201
24 Ga0070699_100007936 3300005518 Bacteria 9219
25 Ga0070699_100016543 3300005518 Bacteria 6330
26 Ga0070699_100024144 3300005518 Bacteria 5239
27 Ga0070699_100029437 3300005518 Bacteria 4734
28 Ga0070699_100069506 3300005518 Bacteria 3060
29 Ga0070699_100203155 3300005518 Unclassified 1762
30 Ga0070697_100002789 3300005536 Bacteria 13454
31 Ga0070697_100006185 3300005536 Bacteria 9263
32 Ga0070697_100019435 3300005536 Bacteria 5368
33 Ga0070697_100134158 3300005536 Bacteria 2078
34 Ga0070697_100135708 3300005536 Bacteria 2066
35 Ga0070696_100026888 3300005546 Bacteria 3916
36 Ga0070704_100004895 3300005549 Bacteria 7770
37 Ga0070704_100081778 3300005549 Bacteria 2380
38 Ga0068861_100015212 3300005719 Bacteria 5416
39 Ga0068861_100107703 3300005719 Bacteria 2228
40 Ga0068863_100010816 3300005841 Bacteria 8848
41 Ga0081455_10003922 3300005937 Bacteria 16933
42 Ga0081455_10054214 3300005937 Bacteria 3419
43 Ga0081538_10001380 3300005981 Bacteria 24918
44 Ga0081538_10002686 3300005981 Bacteria 17125
45 Ga0081538_10008960 3300005981 Bacteria 8408
46 Ga0081539_10006034 3300005985 Bacteria 11869
47 Ga0081539_10033329 3300005985 Bacteria 3139
48 Ga0081539_10055269 3300005985 Bacteria 2210
49 Ga0070717_10000002 3300006028 Bacteria 378525
50 Ga0070717_10004914 3300006028 Bacteria 9725
51 Ga0070717_10012984 3300006028 Bacteria 6363
52 Ga0075364_10005786 3300006051 Bacteria 7213
53 Ga0075432_10004043 3300006058 Bacteria 5007
54 Ga0075432_10011203 3300006058 Bacteria 3047
55 Ga0075369_10007047 3300006186 Bacteria 4272
56 Ga0075428_100077231 3300006844 Bacteria 3635
57 Ga0075428_100078984 3300006844 Bacteria 3591
58 Ga0075428_100117508 3300006844 Bacteria 2897
59 Ga0075428_100160839 3300006844 Bacteria 2437
60 Ga0075428_100179485 3300006844 Bacteria 2292
61 Ga0075430_100006129 3300006846 Bacteria 10131
62 Ga0075430_100063056 3300006846 Bacteria 3113
63 Ga0075430_100128873 3300006846 Bacteria 2109
64 Ga0075430_100143282 3300006846 Bacteria 1990
65 Ga0075431_100048534 3300006847 Bacteria 4379
66 Ga0075431_100257472 3300006847 Unclassified 1772
67 Ga0075433_10004495 3300006852 Bacteria 10866
68 Ga0075433_10009309 3300006852 Bacteria 7855
69 Ga0075433_10158756 3300006852 Bacteria 2012
70 Ga0075434_100097699 3300006871 Bacteria 2941
71 Ga0075434_100227700 3300006871 Archaea 1884
72 Ga0075429_100070862 3300006880 Bacteria 3035
73 Ga0075429_100084864 3300006880 Bacteria 2760
74 Ga0111539_10001786 3300009094 Bacteria 28597
75 Ga0111539_10055365 3300009094 Bacteria 4715
76 Ga0111539_10228576 3300009094 Bacteria 2167
77 Ga0114129_10004047 3300009147 Bacteria 20702
78 Ga0114129_10010765 3300009147 Bacteria 13035
79 Ga0114129_10069176 3300009147 Bacteria 4921
80 Ga0114129_10261651 3300009147 Bacteria 2318
81 Ga0114129_10323534 3300009147 Bacteria 2049
82 Ga0105243_10006235 3300009148 Bacteria 9216
83 Ga0105249_10002630 3300009553 Bacteria 15550
84 Ga0105249_10112136 3300009553 Bacteria 2579
85 Ga0105249_10216809 3300009553 Bacteria 1881
86 Ga0105239_10136888 3300010375 Bacteria 2727
87 Ga0163162_10075259 3300013306 Bacteria 3437
88 Ga0163162_10113950 3300013306 Bacteria 2802
89 Ga0157375_10185283 3300013308 Bacteria 2234
90 Ga0157375_10237247 3300013308 Bacteria 1983
91 Ga0213875_10025073 3300021388 Bacteria 2842
92 Ga0207653_10013382 3300025885 Bacteria 2569
93 Ga0207653_10014949 3300025885 Bacteria 2436
94 Ga0207684_10000553 3300025910 Bacteria 46035
95 Ga0207684_10000731 3300025910 Bacteria 38532
96 Ga0207684_10000764 3300025910 Bacteria 37457
97 Ga0207684_10052326 3300025910 Bacteria 3466
98 Ga0207684_10083709 3300025910 Bacteria 2717
99 Ga0207684_10142843 3300025910 Unclassified 2058
100 Ga0207646_10000045 3300025922 Bacteria 178695
101 Ga0207646_10001339 3300025922 Bacteria 30598
102 Ga0207646_10009771 3300025922 Bacteria 9452
103 Ga0207646_10041355 3300025922 Bacteria 4144
104 Ga0207646_10067587 3300025922 Bacteria 3191
105 Ga0207646_10071505 3300025922 Bacteria 3098
106 Ga0207646_10094728 3300025922 Bacteria 2674
107 Ga0207646_10135726 3300025922 Bacteria 2215
108 Ga0207664_10005891 3300025929 Bacteria 8383
109 Ga0207706_10004215 3300025933 Bacteria 13541
110 Ga0207706_10162110 3300025933 Bacteria 1965
111 Ga0207712_10012098 3300025961 Bacteria 5511
112 Ga0207712_10139706 3300025961 Bacteria 1857
113 Ga0207668_10003255 3300025972 Bacteria 9522
114 Ga0207674_10147354 3300026116 Bacteria 2312
115 Ga0207675_100002050 3300026118 Bacteria 20092
116 Ga0207675_100005193 3300026118 Bacteria 12536
117 Ga0207683_10115972 3300026121 Bacteria 2401
118 Ga0207428_10006153 3300027907 Bacteria 11084
119 Ga0207428_10022977 3300027907 Bacteria 5252
120 Ga0207428_10040239 3300027907 Unclassified 3794
121 Ga0307408_100015369 3300031548 Bacteria 5095
122 Ga0307408_100035897 3300031548 Bacteria 3481
123 Ga0307413_10020376 3300031824 Bacteria 3525
124 Ga0307413_10083836 3300031824 Bacteria 2052
125 Ga0307410_10009806 3300031852 Bacteria 5392
126 Ga0307410_10079222 3300031852 Bacteria 2301
127 Ga0307406_10055244 3300031901 Bacteria 2537
128 Ga0307406_10137855 3300031901 Bacteria 1722
129 Ga0307407_10003597 3300031903 Bacteria 6407
130 Ga0307407_10029479 3300031903 Bacteria 2948
131 Ga0307412_10022627 3300031911 Bacteria 3856
132 Ga0307409_100001240 3300031995 Bacteria 12299
133 Ga0307409_100086102 3300031995 Bacteria 2556
134 Ga0307409_100121483 3300031995 Bacteria 2213
135 Ga0307416_100000885 3300032002 Bacteria 15784
136 Ga0307416_100001626 3300032002 Bacteria 12375
137 Ga0307416_100005485 3300032002 Bacteria 7794
138 Ga0307416_100036070 3300032002 Bacteria 3787
139 Ga0307416_100177008 3300032002 Bacteria 1994
140 Ga0307411_10059112 3300032005 Bacteria 2540
141 Ga0307415_100000910 3300032126 Bacteria 13559
142 Ga0307415_100009901 3300032126 Bacteria 5373
143 Ga0307415_100021640 3300032126 Bacteria 3957
144 Ga0373925_0000010 3300037068 Bacteria 229059
145 Ga0395899_0014816 3300037312 Bacteria 5950
146 Ga0395900_0002127 3300037418 Bacteria 22170
147 Ga0395900_0005114 3300037418 Bacteria 13773
148 Ga0395900_0011252 3300037418 Bacteria 9148
149 Ga0395900_0017541 3300037418 Bacteria 7305
150 Ga0395900_0036480 3300037418 Bacteria 5069
151 Ga0395900_0042006 3300037418 Bacteria 4711
152 Ga0395900_0082266 3300037418 Bacteria 3308
153 Ga0395900_0089112 3300037418 Bacteria 3172
154 Ga0395900_0117380 3300037418 Bacteria 2730
155 Ga0395898_0015255 3300037466 Bacteria 7884
156 Ga0395898_0074087 3300037466 Bacteria 3289
157 Ga0395898_0082333 3300037466 Bacteria 3102
158 Ga0395898_0105890 3300037466 Bacteria 2697
159 Ga0395898_0109913 3300037466 Unclassified 2642
160 Ga0395898_0321111 3300037466 Bacteria 1477
161 Ga0395905_0002509 3300037471 Bacteria 20276
162 Ga0395905_0015416 3300037471 Bacteria 7265
163 Ga0395905_0016877 3300037471 Bacteria 6937
164 Ga0395905_0103958 3300037471 Bacteria 2666
165 Ga0436364_0307325 3300037853 Bacteria 2804
166 Ga0436364_1265507 3300037853 Bacteria 48294
167 Ga0395901_0005424 3300038443 Bacteria 12904
168 Ga0395901_0015291 3300038443 Bacteria 7808
169 Ga0395901_0022022 3300038443 Bacteria 6532
170 Ga0395901_0025391 3300038443 Bacteria 6082
171 Ga0395901_0086402 3300038443 Bacteria 3279
172 Ga0395901_0142552 3300038443 Bacteria 2518
173 Ga0395901_0196283 3300038443 Unclassified 2116
174 Ga0439463_002090 3300042016 Bacteria 5167
175 Ga0439464_0005595 3300042439 Bacteria 3254
176 Ga0439460_0020074 3300042461 Bacteria 1814
177 Ga0450916_001825 3300042530 Bacteria 2181
178 Ga0439440_0005909 3300042993 Bacteria 2444
179 Ga0453683_0133090 3300044673 Bacteria 1568
180 Ga0495638_0026977 3300046460 Bacteria 3720
181 Ga0495609_0054324 3300046538 Bacteria 1779
182 Ga0495668_0029981 3300046616 Bacteria 3073
183 Ga0495670_0026031 3300046691 Bacteria 2896
184 Ga0495672_0053982 3300047320 Bacteria 2352
185 Ga0495673_0007536 3300047469 Bacteria 6235
186 Ga0496101_0000052 3300048904 Bacteria 141163
187 Ga0496102_0000001 3300048905 Bacteria 873433
188 Ga0496102_0175026 3300048905 Bacteria 2021
189 Ga0496103_0000003 3300048906 Bacteria 603967
190 Ga0496104_0004341 3300048907 Bacteria 12333
191 Ga0496104_0059638 3300048907 Bacteria 3613
192 Ga0496104_0161353 3300048907 Bacteria 2150
193 Ga0496106_0005313 3300048909 Bacteria 9538
194 Ga0496107_0003425 3300048910 Bacteria 10604
195 Ga0496108_0012295 3300048911 Bacteria 6963
196 Ga0496109_0012034 3300048912 Bacteria 7452
197 Ga0496109_0086936 3300048912 Bacteria 2887
198 Ga0496110_0067964 3300048913 Bacteria 3154
199 Ga0496110_0132221 3300048913 Unclassified 2254
200 Ga0496111_0009837 3300048914 Bacteria 6391
201 Ga0496112_0025999 3300048915 Bacteria 5626
202 Ga0496113_0030504 3300048916 Bacteria 3903
203 Ga0496114_0075500 3300048917 Bacteria 2839
204 Ga0496116_0000013 3300048919 Bacteria 603993
205 Ga0496117_0000013 3300048920 Bacteria 603995
206 Ga0496118_0000011 3300048921 Bacteria 603995
207 Ga0496119_0000816 3300048922 Bacteria 41631
208 Ga0496120_0000963 3300048923 Bacteria 39266
209 Ga0496121_0000060 3300048924 Bacteria 276682
210 Ga0496126_0000120 3300048929 Bacteria 183747
211 Ga0501031_0001656 3300049568 Bacteria 13987
212 Ga0501036_0000024 3300049572 Bacteria 110026
213 Ga0501037_0017673 3300049573 Bacteria 5249
214 Ga0501038_0012747 3300049574 Bacteria 7679
215 Ga0501038_0013413 3300049574 Bacteria 7470
216 Ga0501040_0000144 3300049576 Bacteria 38633
217 Ga0501040_0084894 3300049576 Bacteria 2197
218 Ga0501041_0000359 3300049577 Bacteria 22602
219 Ga0501041_0027240 3300049577 Bacteria 3444
220 Ga0501042_0000388 3300049578 Bacteria 22349
221 Ga0501042_0113327 3300049578 Bacteria 1952
222 Ga0501043_0033209 3300049579 Bacteria 4059
223 Ga0501046_0000495 3300049580 Bacteria 39248
224 Ga0501048_0000192 3300049582 Bacteria 39421
225 Ga0501048_0007703 3300049582 Bacteria 8162
226 Ga0501070_0036609 3300049586 Bacteria 4098
227 Ga0501071_0003188 3300049587 Bacteria 10210
228 Ga0501072_0000920 3300049588 Bacteria 21630
229 Ga0501074_0010766 3300049590 Bacteria 6643
230 Ga0501075_0000132 3300049591 Bacteria 37143
231 Ga0501076_0000281 3300049592 Bacteria 31694
232 Ga0501077_0000332 3300049593 Bacteria 27953
233 Ga0501077_0070922 3300049593 Bacteria 2208
234 Ga0501079_0020586 3300049741 Bacteria 5043
235 Ga0501080_0033312 3300049742 Bacteria 4808
236 Ga0501081_0046763 3300049743 Bacteria 2976
237 Ga0501045_0000216 3300049824 Bacteria 33098
238 Ga0501045_0059167 3300049824 Bacteria 2806
239 nmdc:mga00v17_4208_c1 3300050491 Bacteria 7467
240 nmdc:mga05p37_110293_c1 3300050507 Bacteria 3385
241 nmdc:mga05p37_126656_c1 3300050507 Bacteria 3136
242 nmdc:mga05p37_167508_c1 3300050507 Bacteria 2681
243 nmdc:mga05p37_281047_c1 3300050507 Bacteria 1985
244 nmdc:mga05p37_6777_c1 3300050507 Bacteria 13502
245 nmdc:mga09592_153047_c1 3300050508 Bacteria 1990
246 nmdc:mga09592_17376_c1 3300050508 Bacteria 5893
247 nmdc:mga0qj67_15701_c1 3300050509 Bacteria 5735
248 nmdc:mga0qj67_38148_c1 3300050509 Bacteria 3769
249 nmdc:mga0qj67_70021_c1 3300050509 Bacteria 2798
250 nmdc:mga0qj67_95208_c1 3300050509 Bacteria 2396
251 nmdc:mga06r32_20455_c1 3300050510 Bacteria 6095
252 nmdc:mga06r32_71776_c1 3300050510 Bacteria 3351
253 nmdc:mga08y16_18055_c1 3300050511 Bacteria 7431
254 nmdc:mga08y16_27457_c1 3300050511 Bacteria 6000
255 nmdc:mga0n895_91550_c1 3300050512 Bacteria 3044
256 nmdc:mga0a205_10334_c1 3300050515 Bacteria 8579
257 nmdc:mga0a205_1709_c1 3300050515 Bacteria 18947
258 nmdc:mga0a205_214798_c1 3300050515 Bacteria 1810
259 nmdc:mga0a205_46416_c1 3300050515 Bacteria 4190
260 nmdc:mga0sz30_10144_c2 3300050516 Bacteria 2297
261 nmdc:mga0sz30_4619_c1 3300050516 Bacteria 4988
262 Ga0495612_0000250 3300053078 Bacteria 22270
263 Ga0500610_0009429 3300053079 Bacteria 4327
264 Ga0500635_0001760 3300053080 Bacteria 5278
265 Ga0500643_011746 3300053087 Bacteria 3175
266 Ga0500652_000283 3300053131 Bacteria 18707
267 Ga0500616_0014345 3300053153 Bacteria 4556
268 Ga0501084_0001254 3300054114 Bacteria 19977
269 Ga0501084_0096794 3300054114 Bacteria 2478
270 Ga0590075_013080 3300059424 Bacteria 2018
271 Ga0501082_0000366 3300060353 Bacteria 39900
272 Ga0501082_0058294 3300060353 Bacteria 3327
273 Ga0530510_0000013 3300061734 Bacteria 110065

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005468 Ga0070707_100123545 Ga0070707_1001235452 388
2 3300005467 Ga0070706_100017896 Ga0070706_1000178965 421
3 3300005536 Ga0070697_100019435 Ga0070697_1000194353 421
4 3300048913 Ga0496110_0132221 Ga0496110_0132221_14_1390 421
5 3300037466 Ga0395898_0321111 Ga0395898_0321111_26_1342 423
6 3300049577 Ga0501041_0027240 Ga0501041_0027240_1203_2708 426
7 3300006028 Ga0070717_10004914 Ga0070717_100049143 429
8 3300049574 Ga0501038_0013413 Ga0501038_0013413_5465_6970 429
9 3300049578 Ga0501042_0113327 Ga0501042_0113327_410_1915 429
10 3300049579 Ga0501043_0033209 Ga0501043_0033209_1123_2628 429
11 3300049582 Ga0501048_0007703 Ga0501048_0007703_4891_6396 429
12 3300049590 Ga0501074_0010766 Ga0501074_0010766_2402_3907 429
13 3300049743 Ga0501081_0046763 Ga0501081_0046763_1424_2929 429
14 3300049824 Ga0501045_0059167 Ga0501045_0059167_539_2044 429
15 3300060353 Ga0501082_0058294 Ga0501082_0058294_1245_2750 429
16 3300025922 Ga0207646_10000045 Ga0207646_10000045147 432
17 3300005445 Ga0070708_100007846 Ga0070708_1000078462 433
18 3300006028 Ga0070717_10000002 Ga0070717_10000002172 433
19 3300025910 Ga0207684_10000764 Ga0207684_1000076410 433
20 3300005471 Ga0070698_100026278 Ga0070698_1000262783 434
21 3300005518 Ga0070699_100016543 Ga0070699_1000165432 434
22 3300049593 Ga0501077_0070922 Ga0501077_0070922_487_1992 434
23 3300005468 Ga0070707_100119336 Ga0070707_1001193362 436
24 3300025922 Ga0207646_10067587 Ga0207646_100675872 436
25 3300038443 Ga0395901_0142552 Ga0395901_0142552_1015_2466 438
26 3300005435 Ga0070714_100000722 Ga0070714_10000072226 440
27 3300006028 Ga0070717_10012984 Ga0070717_100129845 440
28 3300025929 Ga0207664_10005891 Ga0207664_100058915 440
29 3300005445 Ga0070708_100054179 Ga0070708_1000541793 442
30 3300025885 Ga0207653_10014949 Ga0207653_100149492 442
31 3300025910 Ga0207684_10000731 Ga0207684_1000073130 442
32 3300025922 Ga0207646_10041355 Ga0207646_100413554 442
33 3300044673 Ga0453683_0133090 Ga0453683_0133090_91_1551 442
34 3300009148 Ga0105243_10006235 Ga0105243_100062357 443
35 3300009553 Ga0105249_10112136 Ga0105249_101121363 443
36 3300005518 Ga0070699_100203155 Ga0070699_1002031551 444
37 3300025922 Ga0207646_10071505 Ga0207646_100715053 444
38 3300049576 Ga0501040_0084894 Ga0501040_0084894_321_1826 446
39 3300050516 nmdc:mga0sz30_4619_c1 nmdc:mga0sz30_4619_c1_1997_3484 448
40 3300005518 Ga0070699_100069506 Ga0070699_1000695063 452
41 3300005981 Ga0081538_10002686 Ga0081538_1000268612 453
42 3300032126 Ga0307415_100009901 Ga0307415_1000099013 453
43 3300054114 Ga0501084_0096794 Ga0501084_0096794_800_2287 453
44 3300046616 Ga0495668_0029981 Ga0495668_0029981_1322_2794 454
45 3300047320 Ga0495672_0053982 Ga0495672_0053982_256_1758 455
46 3300048913 Ga0496110_0067964 Ga0496110_0067964_1586_3118 456
47 3300005468 Ga0070707_100002851 Ga0070707_10000285110 457
48 3300005518 Ga0070699_100007936 Ga0070699_1000079369 457
49 3300025910 Ga0207684_10083709 Ga0207684_100837092 457
50 3300025922 Ga0207646_10001339 Ga0207646_1000133929 457
51 3300047469 Ga0495673_0007536 Ga0495673_0007536_1345_2841 457
52 3300037068 Ga0373925_0000010 Ga0373925_0000010_188970_190454 458
53 3300005467 Ga0070706_100010134 Ga0070706_1000101346 460
54 3300005468 Ga0070707_100147404 Ga0070707_1001474042 460
55 3300005471 Ga0070698_100034917 Ga0070698_1000349177 460
56 3300006852 Ga0075433_10009309 Ga0075433_100093094 460
57 3300006871 Ga0075434_100227700 Ga0075434_1002277003 460
58 3300025910 Ga0207684_10000553 Ga0207684_1000055335 460
59 3300025922 Ga0207646_10009771 Ga0207646_100097714 460
60 3300005467 Ga0070706_100065531 Ga0070706_1000655313 461
61 3300005471 Ga0070698_100001292 Ga0070698_10000129235 461
62 3300005536 Ga0070697_100002789 Ga0070697_1000027899 461
63 3300025910 Ga0207684_10052326 Ga0207684_100523263 461
64 3300025922 Ga0207646_10135726 Ga0207646_101357263 461
65 3300031548 Ga0307408_100015369 Ga0307408_1000153693 461
66 3300031903 Ga0307407_10003597 Ga0307407_100035974 461
67 3300031995 Ga0307409_100001240 Ga0307409_1000012409 461
68 3300032002 Ga0307416_100000885 Ga0307416_10000088511 461
69 3300037471 Ga0395905_0015416 Ga0395905_0015416_3501_4931 461
70 3300038443 Ga0395901_0015291 Ga0395901_0015291_1754_3184 461
71 3300003203 JGI25406J46586_10027746 JGI25406J46586_100277461 462
72 3300005985 Ga0081539_10006034 Ga0081539_100060346 462
73 3300013308 Ga0157375_10185283 Ga0157375_101852832 462
74 3300005518 Ga0070699_100024144 Ga0070699_1000241444 463
75 3300005518 Ga0070699_100029437 Ga0070699_1000294374 463
76 3300006844 Ga0075428_100078984 Ga0075428_1000789844 463
77 3300031995 Ga0307409_100121483 Ga0307409_1001214832 463
78 3300037418 Ga0395900_0089112 Ga0395900_0089112_10_1509 463
79 3300048904 Ga0496101_0000052 Ga0496101_0000052_60183_61697 463
80 3300048905 Ga0496102_0000001 Ga0496102_0000001_423697_425211 463
81 3300048906 Ga0496103_0000003 Ga0496103_0000003_154759_156273 463
82 3300048909 Ga0496106_0005313 Ga0496106_0005313_7044_8558 463
83 3300048910 Ga0496107_0003425 Ga0496107_0003425_1692_3206 463
84 3300048919 Ga0496116_0000013 Ga0496116_0000013_447721_449235 463
85 3300048920 Ga0496117_0000013 Ga0496117_0000013_154759_156273 463
86 3300048921 Ga0496118_0000011 Ga0496118_0000011_447723_449237 463
87 3300048922 Ga0496119_0000816 Ga0496119_0000816_12520_14034 463
88 3300048923 Ga0496120_0000963 Ga0496120_0000963_1177_2691 463
89 3300048924 Ga0496121_0000060 Ga0496121_0000060_60207_61721 463
90 3300048929 Ga0496126_0000120 Ga0496126_0000120_177678_179192 463
91 3300005719 Ga0068861_100107703 Ga0068861_1001077032 464
92 3300009553 Ga0105249_10002630 Ga0105249_1000263011 464
93 3300013306 Ga0163162_10075259 Ga0163162_100752592 464
94 3300013306 Ga0163162_10113950 Ga0163162_101139502 464
95 3300013308 Ga0157375_10237247 Ga0157375_102372472 464
96 3300025933 Ga0207706_10004215 Ga0207706_100042152 464
97 3300026118 Ga0207675_100002050 Ga0207675_10000205016 464
98 3300046460 Ga0495638_0026977 Ga0495638_0026977_50_1552 464
99 3300046691 Ga0495670_0026031 Ga0495670_0026031_91_1566 464
100 3300005536 Ga0070697_100134158 Ga0070697_1001341581 465
101 3300005549 Ga0070704_100081778 Ga0070704_1000817782 465
102 3300005981 Ga0081538_10001380 Ga0081538_1000138019 465
103 3300006844 Ga0075428_100077231 Ga0075428_1000772313 465
104 3300009147 Ga0114129_10010765 Ga0114129_1001076512 465
105 3300025885 Ga0207653_10013382 Ga0207653_100133822 465
106 3300025910 Ga0207684_10142843 Ga0207684_101428432 465
107 3300025922 Ga0207646_10094728 Ga0207646_100947282 465
108 3300031548 Ga0307408_100035897 Ga0307408_1000358973 465
109 3300032002 Ga0307416_100177008 Ga0307416_1001770082 465
110 3300032126 Ga0307415_100000910 Ga0307415_1000009107 465
111 3300037418 Ga0395900_0002127 Ga0395900_0002127_10302_11846 465
112 3300037418 Ga0395900_0042006 Ga0395900_0042006_1229_2761 465
113 3300037466 Ga0395898_0015255 Ga0395898_0015255_5805_7349 465
114 3300037471 Ga0395905_0002509 Ga0395905_0002509_4372_5916 465
115 3300038443 Ga0395901_0022022 Ga0395901_0022022_4368_5912 465
116 3300048905 Ga0496102_0175026 Ga0496102_0175026_391_1899 465
117 3300048907 Ga0496104_0161353 Ga0496104_0161353_402_1910 465
118 3300048912 Ga0496109_0086936 Ga0496109_0086936_502_2010 465
119 3300050507 nmdc:mga05p37_167508_c1 nmdc:mga05p37_167508_c1_494_1963 465
120 3300053078 Ga0495612_0000250 Ga0495612_0000250_1713_3188 465
121 3300003373 JGI25407J50210_10022275 JGI25407J50210_100222751 466
122 3300005354 Ga0070675_100017669 Ga0070675_1000176691 466
123 3300005438 Ga0070701_10062278 Ga0070701_100622781 466
124 3300005444 Ga0070694_100004286 Ga0070694_1000042869 466
125 3300005549 Ga0070704_100004895 Ga0070704_1000048958 466
126 3300005719 Ga0068861_100015212 Ga0068861_1000152122 466
127 3300005985 Ga0081539_10055269 Ga0081539_100552692 466
128 3300006058 Ga0075432_10004043 Ga0075432_100040433 466
129 3300006844 Ga0075428_100160839 Ga0075428_1001608392 466
130 3300006852 Ga0075433_10158756 Ga0075433_101587562 466
131 3300006871 Ga0075434_100097699 Ga0075434_1000976991 466
132 3300009094 Ga0111539_10228576 Ga0111539_102285762 466
133 3300009147 Ga0114129_10069176 Ga0114129_100691763 466
134 3300009147 Ga0114129_10261651 Ga0114129_102616512 466
135 3300025961 Ga0207712_10012098 Ga0207712_100120983 466
136 3300026118 Ga0207675_100005193 Ga0207675_1000051932 466
137 3300027907 Ga0207428_10006153 Ga0207428_1000615313 466
138 3300037418 Ga0395900_0011252 Ga0395900_0011252_7090_8574 466
139 3300037418 Ga0395900_0036480 Ga0395900_0036480_2225_3709 466
140 3300037466 Ga0395898_0082333 Ga0395898_0082333_1300_2784 466
141 3300038443 Ga0395901_0025391 Ga0395901_0025391_1675_3159 466
142 3300046538 Ga0495609_0054324 Ga0495609_0054324_45_1544 466
143 3300048907 Ga0496104_0004341 Ga0496104_0004341_6058_7560 466
144 3300048911 Ga0496108_0012295 Ga0496108_0012295_4835_6337 466
145 3300048912 Ga0496109_0012034 Ga0496109_0012034_709_2211 466
146 3300048914 Ga0496111_0009837 Ga0496111_0009837_2908_4410 466
147 3300048915 Ga0496112_0025999 Ga0496112_0025999_1787_3289 466
148 3300048916 Ga0496113_0030504 Ga0496113_0030504_432_1934 466
149 3300048917 Ga0496114_0075500 Ga0496114_0075500_647_2185 466
150 3300050507 nmdc:mga05p37_110293_c1 nmdc:mga05p37_110293_c1_745_2220 466
151 3300050512 nmdc:mga0n895_91550_c1 nmdc:mga0n895_91550_c1_505_2031 466
152 3300050515 nmdc:mga0a205_10334_c1 nmdc:mga0a205_10334_c1_4616_6091 466
153 3300005536 Ga0070697_100006185 Ga0070697_1000061856 467
154 3300005546 Ga0070696_100026888 Ga0070696_1000268883 467
155 3300005937 Ga0081455_10054214 Ga0081455_100542143 467
156 3300010375 Ga0105239_10136888 Ga0105239_101368882 467
157 3300025933 Ga0207706_10162110 Ga0207706_101621102 467
158 3300026121 Ga0207683_10115972 Ga0207683_101159722 467
159 3300031852 Ga0307410_10079222 Ga0307410_100792221 467
160 3300032002 Ga0307416_100001626 Ga0307416_10000162611 467
161 3300032002 Ga0307416_100036070 Ga0307416_1000360702 467
162 3300037853 Ga0436364_0307325 Ga0436364_0307325_601_2124 467
163 3300042016 Ga0439463_002090 Ga0439463_002090_1161_2639 467
164 3300042439 Ga0439464_0005595 Ga0439464_0005595_1178_2656 467
165 3300042461 Ga0439460_0020074 Ga0439460_0020074_127_1605 467
166 3300042530 Ga0450916_001825 Ga0450916_001825_100_1578 467
167 3300049568 Ga0501031_0001656 Ga0501031_0001656_11222_12700 467
168 3300049572 Ga0501036_0000024 Ga0501036_0000024_79055_80533 467
169 3300049573 Ga0501037_0017673 Ga0501037_0017673_2203_3681 467
170 3300049574 Ga0501038_0012747 Ga0501038_0012747_4081_5559 467
171 3300049576 Ga0501040_0000144 Ga0501040_0000144_22838_24316 467
172 3300049577 Ga0501041_0000359 Ga0501041_0000359_9030_10508 467
173 3300049578 Ga0501042_0000388 Ga0501042_0000388_3729_5207 467
174 3300049580 Ga0501046_0000495 Ga0501046_0000495_8388_9866 467
175 3300049582 Ga0501048_0000192 Ga0501048_0000192_29481_30959 467
176 3300049586 Ga0501070_0036609 Ga0501070_0036609_1320_2798 467
177 3300049587 Ga0501071_0003188 Ga0501071_0003188_6723_8201 467
178 3300049588 Ga0501072_0000920 Ga0501072_0000920_8044_9522 467
179 3300049591 Ga0501075_0000132 Ga0501075_0000132_6231_7709 467
180 3300049592 Ga0501076_0000281 Ga0501076_0000281_8363_9841 467
181 3300049593 Ga0501077_0000332 Ga0501077_0000332_10275_11753 467
182 3300049741 Ga0501079_0020586 Ga0501079_0020586_2890_4368 467
183 3300049742 Ga0501080_0033312 Ga0501080_0033312_2766_4244 467
184 3300049824 Ga0501045_0000216 Ga0501045_0000216_5787_7265 467
185 3300050515 nmdc:mga0a205_214798_c1 nmdc:mga0a205_214798_c1_244_1734 467
186 3300054114 Ga0501084_0001254 Ga0501084_0001254_10896_12374 467
187 3300059424 Ga0590075_013080 Ga0590075_013080_404_1882 467
188 3300060353 Ga0501082_0000366 Ga0501082_0000366_11984_13462 467
189 3300061734 Ga0530510_0000013 Ga0530510_0000013_29549_31027 467
190 iso_pu_bacteria 2551306166 2552109118 467
191 3300005985 Ga0081539_10033329 Ga0081539_100333292 468
192 3300006846 Ga0075430_100006129 Ga0075430_1000061297 468
193 3300009094 Ga0111539_10055365 Ga0111539_100553654 468
194 3300027907 Ga0207428_10022977 Ga0207428_100229774 468
195 3300031824 Ga0307413_10020376 Ga0307413_100203762 468
196 3300031901 Ga0307406_10055244 Ga0307406_100552442 468
197 3300031911 Ga0307412_10022627 Ga0307412_100226273 468
198 3300032005 Ga0307411_10059112 Ga0307411_100591121 468
199 3300037418 Ga0395900_0117380 Ga0395900_0117380_586_2061 468
200 3300037466 Ga0395898_0105890 Ga0395898_0105890_617_2092 468
201 3300037471 Ga0395905_0103958 Ga0395905_0103958_511_1986 468
202 3300042993 Ga0439440_0005909 Ga0439440_0005909_589_2064 468
203 3300050509 nmdc:mga0qj67_15701_c1 nmdc:mga0qj67_15701_c1_2575_4089 468
204 3300050509 nmdc:mga0qj67_38148_c1 nmdc:mga0qj67_38148_c1_63_1538 468
205 3300050510 nmdc:mga06r32_20455_c1 nmdc:mga06r32_20455_c1_2451_3926 468
206 3300050511 nmdc:mga08y16_27457_c1 nmdc:mga08y16_27457_c1_3260_4735 468
207 3300050515 nmdc:mga0a205_1709_c1 nmdc:mga0a205_1709_c1_3269_4744 468
208 3300031824 Ga0307413_10083836 Ga0307413_100838362 469
209 3300031852 Ga0307410_10009806 Ga0307410_100098063 469
210 3300031901 Ga0307406_10137855 Ga0307406_101378552 469
211 3300031903 Ga0307407_10029479 Ga0307407_100294792 469
212 3300031995 Ga0307409_100086102 Ga0307409_1000861022 469
213 3300032002 Ga0307416_100005485 Ga0307416_1000054854 469
214 3300032126 Ga0307415_100021640 Ga0307415_1000216403 469
215 3300053087 Ga0500643_011746 Ga0500643_011746_27_1541 469
216 3300005445 Ga0070708_100000572 Ga0070708_1000005727 472
217 3300005981 Ga0081538_10008960 Ga0081538_100089604 472
218 3300006844 Ga0075428_100117508 Ga0075428_1001175082 473
219 3300006846 Ga0075430_100063056 Ga0075430_1000630562 473
220 3300006846 Ga0075430_100128873 Ga0075430_1001288731 473
221 3300006847 Ga0075431_100048534 Ga0075431_1000485342 473
222 3300009147 Ga0114129_10323534 Ga0114129_103235342 473
223 3300021388 Ga0213875_10025073 Ga0213875_100250732 473
224 3300037312 Ga0395899_0014816 Ga0395899_0014816_292_1791 473
225 3300037418 Ga0395900_0005114 Ga0395900_0005114_10717_12216 473
226 3300037466 Ga0395898_0074087 Ga0395898_0074087_1775_3274 473
227 3300037471 Ga0395905_0016877 Ga0395905_0016877_3839_5338 473
228 3300037853 Ga0436364_1265507 Ga0436364_1265507_4060_5553 473
229 3300038443 Ga0395901_0086402 Ga0395901_0086402_1023_2522 473
230 3300050507 nmdc:mga05p37_281047_c1 nmdc:mga05p37_281047_c1_43_1569 473
231 3300050509 nmdc:mga0qj67_70021_c1 nmdc:mga0qj67_70021_c1_760_2286 473
232 3300050509 nmdc:mga0qj67_95208_c1 nmdc:mga0qj67_95208_c1_345_2078 473
233 3300050510 nmdc:mga06r32_71776_c1 nmdc:mga06r32_71776_c1_521_2047 473
234 3300005347 Ga0070668_100000201 Ga0070668_10000020128 474
235 3300006844 Ga0075428_100179485 Ga0075428_1001794851 474
236 3300025972 Ga0207668_10003255 Ga0207668_100032557 474
237 3300053079 Ga0500610_0009429 Ga0500610_0009429_13_1509 474
238 3300053153 Ga0500616_0014345 Ga0500616_0014345_1829_3334 474
239 3300053080 Ga0500635_0001760 Ga0500635_0001760_3677_5197 475
240 3300053131 Ga0500652_000283 Ga0500652_000283_6323_7843 475
241 3300006880 Ga0075429_100070862 Ga0075429_1000708621 476
242 3300050508 nmdc:mga09592_153047_c1 nmdc:mga09592_153047_c1_151_1848 476
243 3300006846 Ga0075430_100143282 Ga0075430_1001432822 477
244 3300006880 Ga0075429_100084864 Ga0075429_1000848642 477
245 3300048907 Ga0496104_0059638 Ga0496104_0059638_1969_3564 477
246 3300005331 Ga0070670_100026988 Ga0070670_1000269885 478
247 3300009553 Ga0105249_10216809 Ga0105249_102168091 478
248 3300025961 Ga0207712_10139706 Ga0207712_101397062 478
249 3300037466 Ga0395898_0109913 Ga0395898_0109913_198_1697 478
250 3300038443 Ga0395901_0196283 Ga0395901_0196283_305_1804 478
251 3300005937 Ga0081455_10003922 Ga0081455_100039228 479
252 3300006051 Ga0075364_10005786 Ga0075364_100057864 479
253 3300006058 Ga0075432_10011203 Ga0075432_100112033 479
254 3300006186 Ga0075369_10007047 Ga0075369_100070472 479
255 3300006847 Ga0075431_100257472 Ga0075431_1002574722 479
256 3300006852 Ga0075433_10004495 Ga0075433_100044955 479
257 3300009094 Ga0111539_10001786 Ga0111539_1000178633 479
258 3300009147 Ga0114129_10004047 Ga0114129_1000404715 479
259 3300027907 Ga0207428_10040239 Ga0207428_100402393 479
260 3300050491 nmdc:mga00v17_4208_c1 nmdc:mga00v17_4208_c1_5102_6643 479
261 3300050507 nmdc:mga05p37_126656_c1 nmdc:mga05p37_126656_c1_1070_2743 479
262 3300050507 nmdc:mga05p37_6777_c1 nmdc:mga05p37_6777_c1_8602_10101 479
263 3300050508 nmdc:mga09592_17376_c1 nmdc:mga09592_17376_c1_3364_5037 479
264 3300050511 nmdc:mga08y16_18055_c1 nmdc:mga08y16_18055_c1_2355_4028 479
265 3300050515 nmdc:mga0a205_46416_c1 nmdc:mga0a205_46416_c1_197_1870 479
266 3300050516 nmdc:mga0sz30_10144_c2 nmdc:mga0sz30_10144_c2_378_1919 479
267 3300005536 Ga0070697_100135708 Ga0070697_1001357082 483
268 3300002459 JGI24751J29686_10007658 JGI24751J29686_100076582 484
269 3300005331 Ga0070670_100014765 Ga0070670_1000147652 484
270 3300005841 Ga0068863_100010816 Ga0068863_1000108162 484
271 3300026116 Ga0207674_10147354 Ga0207674_101473542 484
272 3300037418 Ga0395900_0017541 Ga0395900_0017541_2879_4393 484
273 3300037418 Ga0395900_0082266 Ga0395900_0082266_1224_2738 484
274 3300038443 Ga0395901_0005424 Ga0395901_0005424_8965_10479 484

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00324

AA_permease

Amino acid permease

81

524

0.79

PF13520

AA_permease_2

Amino acid permease

77

514

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.775 16 460
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.7715 19 459
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.7701 14 460
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.7666 16 460
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.7651 19 459
ID Description Score Start End Superfamily
af_Q54KK3_597_1052_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.85 13 467 1.20.1740.10
af_Q54KK3_597_1052_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8413 13 467 1.20.1740.10
af_P9WQM3_13_431_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8109 16 462 1.20.1740.10
af_P24207_19_458_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8035 15 459 1.20.1740.10
af_B9EWF0_29_508_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.8033 14 455 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A6J7DNB2-F1-model_v4 Unannotated protein 0.9232 14 470 GO:0016020
GO:0055085
AF-A0A4P6JKN6-F1-model_v4 Amino acid permease 0.8951 17 468 GO:0005886
GO:0022857
AF-A0A328VJT7-F1-model_v4 Amino acid permease/ SLC12A domain-containing protein 0.8875 1 475 GO:0016020
GO:0055085
AF-A0A6J7DNB2-F1-model_v4 Unannotated protein 0.8829 14 470 GO:0016020
GO:0055085
AF-A0A328VJT7-F1-model_v4 Amino acid permease/ SLC12A domain-containing protein 0.8821 1 475 GO:0016020
GO:0055085

Feature Viewer

pLDDT pTM Quality
79.01 0.83 High
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Predicted Structure (AlphaFold2)

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