F379975

General Info

Members Datasets Scaffolds Average Seq Length
274 179 243 399

Family's Representative Sequence

Representative Sequence 3300047447|Ga0495685_016884|Ga0495685_016884_226_1488
Length 420
Sequence VPCATGLVCATFSPGDSKNVKTIEDLDVAGRRVFVRADLNVPLSNGSITDDGRIRAVAPTIAKLLQAGAKVIVASHLGRPKGEPDPQFSLAPVAVRLGEILAAPVSFATDTVGESAKATVAALADGEVTLLENLRFNAGETAKDDAERGAFADALAGLADLYVGDGFGAVHRKHASVYDLPARLPHAVGDLIATEVGVLKRLTEEVERPYVVVLGGSKVSDKVGVIDNLLGKADRILIGGGMAYTFLAALGHEVGISLLQKDQIPTVLEYLERGKANGVEFVLPVDVSVSGSFPDLKTLAPVADFAVVDADKIPADKEGLDIGPKSRELFAAKLADAKTVFWNGPVGVFEHPEFAEGTKAVAQALLDSDAFTVVGGGDSAAAVRILGFDETKFGHISTGGGASLEYLEGKTLPGLAALEG

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
3 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
4 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
5 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
6 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
7 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
8 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
9 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
10 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
11 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
12 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
13 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
14 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
15 2867369537 Streptomyces sp. Z26 Isolate Unclassified
16 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
17 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
18 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
19 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
20 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
21 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
22 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
23 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
52 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
69 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
70 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
81 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
87 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
100 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
103 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
119 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
154 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
155 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
156 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
157 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
161 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
162 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
163 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
164 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
165 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
168 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
170 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
171 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
172 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
173 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
174 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
175 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
176 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
177 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
178 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
179 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.96
Metatranscriptomes 0.73
Isolates 11.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.84
Nodule 0
Rhizoplane 0.36
Rhizosphere 81.75
Stem 0
Stem Tuber 0
Unclassified 12.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10004130 3300002075 Bacteria 3579
2 JGI25160J50197_1019797 3300003354 Bacteria 2053
3 Ga0070658_10201185 3300005327 Bacteria 1681
4 Ga0070659_100023295 3300005366 Bacteria 4738
5 Ga0070713_100046158 3300005436 Bacteria 3573
6 Ga0070698_100008110 3300005471 Bacteria 11352
7 Ga0070698_100067663 3300005471 Bacteria 3591
8 Ga0070664_100046261 3300005564 Bacteria 3676
9 Ga0068858_100000021 3300005842 Bacteria 172933
10 Ga0081455_10000589 3300005937 Bacteria 47133
11 Ga0075365_10023828 3300006038 Bacteria 3853
12 Ga0111539_10093674 3300009094 Bacteria 3528
13 Ga0105245_10234852 3300009098 Bacteria 1775
14 Ga0105243_10005196 3300009148 Bacteria 10187
15 Ga0105248_10002212 3300009177 Bacteria 21546
16 Ga0157379_10000005 3300014968 Bacteria 172948
17 Ga0206353_11439385 3300020082 Bacteria 1326
18 Ga0213875_10003802 3300021388 Bacteria 8487
19 Ga0207426_1005349 3300025302 Bacteria 5896
20 Ga0207647_10012752 3300025904 Bacteria 5841
21 Ga0207705_10100870 3300025909 Bacteria 2123
22 Ga0207663_10143167 3300025916 Bacteria 1668
23 Ga0207657_10001763 3300025919 Bacteria 23366
24 Ga0207700_10203229 3300025928 Bacteria 1671
25 Ga0207664_10051098 3300025929 Bacteria 3262
26 Ga0207711_10001522 3300025941 Bacteria 21546
27 Ga0207679_10012019 3300025945 Bacteria 5629
28 Ga0207703_10000001 3300026035 Bacteria 822925
29 Ga0307517_10001088 3300028786 Bacteria 45974
30 Ga0307517_10142049 3300028786 Bacteria 1681
31 Ga0307515_10142480 3300028794 Bacteria 2562
32 Ga0307511_10030082 3300030521 Bacteria 4886
33 Ga0307509_10039300 3300031507 Bacteria 5156
34 Ga0307508_10012169 3300031616 Bacteria 7868
35 Ga0307514_10014261 3300031649 Bacteria 6585
36 Ga0307514_10119260 3300031649 Bacteria 1845
37 Ga0316576_10003068 3300031727 Bacteria 9724
38 Ga0316578_10101351 3300031728 Bacteria 1726
39 Ga0307516_10010050 3300031730 Bacteria 10469
40 Ga0307516_10046955 3300031730 Bacteria 4258
41 Ga0307518_10000054 3300031838 Bacteria 76765
42 Ga0307507_10000019 3300033179 Bacteria 224026
43 Ga0307510_10019153 3300033180 Bacteria 8030
44 Ga0395905_0034140 3300037471 Bacteria 4776
45 Ga0395901_0092264 3300038443 Bacteria 3170
46 Ga0466969_0000609 3300044656 Bacteria 19347
47 Ga0466969_0003372 3300044656 Bacteria 8510
48 Ga0466969_0004909 3300044656 Bacteria 7124
49 Ga0466969_0013918 3300044656 Bacteria 4234
50 Ga0466965_0001100 3300044683 Bacteria 10535
51 Ga0466966_0006290 3300044684 Bacteria 7856
52 Ga0466966_0006673 3300044684 Bacteria 7643
53 Ga0466966_0007366 3300044684 Bacteria 7300
54 Ga0466961_0001045 3300044693 Bacteria 17043
55 Ga0466961_0007087 3300044693 Bacteria 7132
56 Ga0466961_0038356 3300044693 Bacteria 3073
57 Ga0466961_0121589 3300044693 Bacteria 1639
58 Ga0466961_0123430 3300044693 Bacteria 1625
59 Ga0466963_0113936 3300044694 Bacteria 1857
60 Ga0466964_0023074 3300044706 Bacteria 2417
61 Ga0466971_0000239 3300044719 Bacteria 20957
62 Ga0466971_0003435 3300044719 Bacteria 6775
63 Ga0466970_0009460 3300044765 Bacteria 4928
64 Ga0466970_0096419 3300044765 Bacteria 1608
65 Ga0466957_0034029 3300044842 Bacteria 3057
66 Ga0466957_0114335 3300044842 Bacteria 1714
67 Ga0466957_0124409 3300044842 Bacteria 1646
68 Ga0466959_0002974 3300045049 Bacteria 10942
69 Ga0466959_0010122 3300045049 Bacteria 6727
70 Ga0466959_0016829 3300045049 Bacteria 5351
71 Ga0466959_0020001 3300045049 Bacteria 4927
72 Ga0466959_0028636 3300045049 Bacteria 4130
73 Ga0466958_0011408 3300045836 Bacteria 5005
74 Ga0466958_0119385 3300045836 Bacteria 1650
75 Ga0466967_0018579 3300045976 Bacteria 5561
76 Ga0466967_0026634 3300045976 Bacteria 4792
77 Ga0466967_0151789 3300045976 Bacteria 2166
78 Ga0466967_0182633 3300045976 Bacteria 1979
79 Ga0466967_0282490 3300045976 Bacteria 1593
80 Ga0495592_0014447 3300046454 Bacteria 5992
81 Ga0495603_0019743 3300046455 Bacteria 4080
82 Ga0495603_0079220 3300046455 Bacteria 1926
83 Ga0495629_0023184 3300046459 Bacteria 4423
84 Ga0495629_0078256 3300046459 Bacteria 2309
85 Ga0495651_0000951 3300046462 Bacteria 22391
86 Ga0495651_0035043 3300046462 Bacteria 3910
87 Ga0495653_0032195 3300046463 Bacteria 4165
88 Ga0495662_0008597 3300046476 Bacteria 5017
89 Ga0495664_0054470 3300046477 Bacteria 2378
90 Ga0495594_0013189 3300046499 Bacteria 4310
91 Ga0495608_0029607 3300046511 Bacteria 3712
92 Ga0495618_0062945 3300046514 Bacteria 2355
93 Ga0495628_0008064 3300046516 Bacteria 9064
94 Ga0495643_0005478 3300046522 Bacteria 8583
95 Ga0495666_0004042 3300046526 Bacteria 7414
96 Ga0495652_0008749 3300046529 Bacteria 9215
97 Ga0495652_0028900 3300046529 Bacteria 4873
98 Ga0495665_0002726 3300046531 Bacteria 9530
99 Ga0495640_0002187 3300046533 Bacteria 15628
100 Ga0495640_0015320 3300046533 Bacteria 5771
101 Ga0495640_0041507 3300046533 Bacteria 3215
102 Ga0495645_0050883 3300046543 Bacteria 3014
103 Ga0495667_0004232 3300046559 Bacteria 9670
104 Ga0495634_0005480 3300046642 Bacteria 9757
105 Ga0495611_0009712 3300046648 Bacteria 4068
106 Ga0495635_0012243 3300046663 Bacteria 6009
107 Ga0495635_0033027 3300046663 Bacteria 3590
108 Ga0495657_0008203 3300046675 Bacteria 8003
109 Ga0495599_0029959 3300046678 Bacteria 3413
110 Ga0495623_0065408 3300046679 Bacteria 2273
111 Ga0495646_0001474 3300046680 Bacteria 13981
112 Ga0495658_0067312 3300046683 Bacteria 2071
113 Ga0495613_0005151 3300046689 Bacteria 9812
114 Ga0495613_0005162 3300046689 Bacteria 9804
115 Ga0495670_0006962 3300046691 Bacteria 5571
116 Ga0495589_0055377 3300046794 Bacteria 1954
117 Ga0495600_0005309 3300046809 Bacteria 7764
118 Ga0495600_0046649 3300046809 Bacteria 2826
119 Ga0495581_0005694 3300047315 Bacteria 7226
120 Ga0495581_0033050 3300047315 Bacteria 2995
121 Ga0495604_0001110 3300047317 Bacteria 22327
122 Ga0495604_0031399 3300047317 Bacteria 4212
123 Ga0495636_0017305 3300047318 Bacteria 2885
124 Ga0495674_0065960 3300047319 Bacteria 3142
125 Ga0495676_0004427 3300047321 Bacteria 12840
126 Ga0495683_0012851 3300047323 Bacteria 4391
127 Ga0495687_076040 3300047443 Bacteria 1330
128 Ga0495675_0021351 3300047444 Bacteria 4122
129 Ga0495675_0041122 3300047444 Bacteria 2946
130 Ga0495679_007428 3300047446 Bacteria 4571
131 Ga0495685_001548 3300047447 Bacteria 7057
132 Ga0495685_016884 3300047447 Bacteria 2495
133 Ga0495681_0003148 3300047470 Bacteria 11554
134 Ga0495684_0043274 3300047471 Bacteria 3447
135 Ga0495593_0044463 3300047673 Bacteria 2375
136 Ga0495614_0000173 3300048089 Bacteria 23764
137 Ga0501323_000129 3300049539 Bacteria 4308
138 Ga0501031_0003626 3300049568 Bacteria 9933
139 Ga0501031_0019436 3300049568 Bacteria 4426
140 Ga0501031_0103349 3300049568 Bacteria 1859
141 Ga0501032_0018060 3300049569 Bacteria 4947
142 Ga0501032_0023987 3300049569 Bacteria 4214
143 Ga0501032_0123149 3300049569 Bacteria 1713
144 Ga0501033_0000910 3300049570 Bacteria 27020
145 Ga0501033_0004714 3300049570 Bacteria 10913
146 Ga0501033_0029389 3300049570 Bacteria 4130
147 Ga0501033_0046859 3300049570 Bacteria 3214
148 Ga0501034_0005406 3300049571 Bacteria 13967
149 Ga0501034_0006469 3300049571 Bacteria 12618
150 Ga0501034_0016403 3300049571 Bacteria 7603
151 Ga0501034_0062457 3300049571 Bacteria 3740
152 Ga0501036_0003650 3300049572 Bacteria 12309
153 Ga0501036_0005698 3300049572 Bacteria 10103
154 Ga0501036_0024228 3300049572 Bacteria 5115
155 Ga0501036_0028760 3300049572 Bacteria 4697
156 Ga0501036_0033927 3300049572 Bacteria 4317
157 Ga0501037_0006158 3300049573 Bacteria 8764
158 Ga0501037_0007143 3300049573 Bacteria 8163
159 Ga0501037_0019439 3300049573 Bacteria 5011
160 Ga0501037_0021394 3300049573 Bacteria 4779
161 Ga0501037_0031970 3300049573 Bacteria 3885
162 Ga0501038_0000969 3300049574 Bacteria 25734
163 Ga0501038_0029942 3300049574 Bacteria 4819
164 Ga0501038_0032768 3300049574 Bacteria 4581
165 Ga0501039_0001327 3300049575 Bacteria 18076
166 Ga0501039_0163442 3300049575 Bacteria 1750
167 Ga0501040_0006055 3300049576 Bacteria 7835
168 Ga0501040_0033263 3300049576 Bacteria 3492
169 Ga0501041_0000921 3300049577 Bacteria 15927
170 Ga0501042_0009235 3300049578 Bacteria 6561
171 Ga0501042_0015840 3300049578 Bacteria 5166
172 Ga0501042_0087290 3300049578 Bacteria 2238
173 Ga0501043_0001261 3300049579 Bacteria 22270
174 Ga0501043_0001521 3300049579 Bacteria 20239
175 Ga0501043_0026003 3300049579 Bacteria 4592
176 Ga0501043_0036240 3300049579 Bacteria 3880
177 Ga0501043_0039566 3300049579 Bacteria 3705
178 Ga0501046_0003705 3300049580 Bacteria 13995
179 Ga0501046_0004888 3300049580 Bacteria 12069
180 Ga0501046_0010494 3300049580 Bacteria 7950
181 Ga0501046_0079316 3300049580 Bacteria 2538
182 Ga0501047_0000055 3300049581 Bacteria 144149
183 Ga0501047_0001216 3300049581 Bacteria 25535
184 Ga0501047_0002649 3300049581 Bacteria 17037
185 Ga0501047_0007554 3300049581 Bacteria 10231
186 Ga0501047_0016714 3300049581 Bacteria 7008
187 Ga0501047_0199814 3300049581 Bacteria 1860
188 Ga0501048_0000409 3300049582 Bacteria 29965
189 Ga0501048_0000969 3300049582 Bacteria 21246
190 Ga0501048_0011125 3300049582 Bacteria 6710
191 Ga0501067_0008010 3300049583 Bacteria 5868
192 Ga0501067_0042303 3300049583 Bacteria 2529
193 Ga0501068_0000061 3300049584 Bacteria 42895
194 Ga0501069_0000147 3300049585 Bacteria 31593
195 Ga0501069_0056515 3300049585 Bacteria 2186
196 Ga0501070_0012414 3300049586 Bacteria 7185
197 Ga0501070_0033530 3300049586 Bacteria 4297
198 Ga0501070_0186616 3300049586 Bacteria 1705
199 Ga0501071_0009461 3300049587 Bacteria 6491
200 Ga0501072_0009466 3300049588 Bacteria 7406
201 Ga0501073_0011596 3300049589 Bacteria 6442
202 Ga0501073_0014547 3300049589 Bacteria 5716
203 Ga0501073_0072803 3300049589 Bacteria 2393
204 Ga0501074_0000206 3300049590 Bacteria 32291
205 Ga0501074_0014896 3300049590 Bacteria 5655
206 Ga0501074_0044596 3300049590 Bacteria 3209
207 Ga0501076_0006682 3300049592 Bacteria 8368
208 Ga0501077_0015525 3300049593 Bacteria 4795
209 Ga0501077_0144528 3300049593 Bacteria 1509
210 Ga0501079_0005055 3300049741 Bacteria 9790
211 Ga0501080_0000118 3300049742 Bacteria 55410
212 Ga0501080_0033227 3300049742 Bacteria 4814
213 Ga0501083_0001007 3300049744 Bacteria 18772
214 Ga0501035_0001929 3300049822 Bacteria 20779
215 Ga0501035_0011028 3300049822 Bacteria 8367
216 Ga0501035_0014422 3300049822 Bacteria 7293
217 Ga0501044_0002944 3300049823 Bacteria 19370
218 Ga0501044_0009389 3300049823 Bacteria 10656
219 Ga0501044_0023962 3300049823 Bacteria 6486
220 Ga0501044_0137418 3300049823 Bacteria 2434
221 Ga0501045_0020806 3300049824 Bacteria 4688
222 Ga0501045_0040868 3300049824 Bacteria 3373
223 Ga0501045_0227510 3300049824 Bacteria 1388
224 Ga0495601_0006921 3300053077 Bacteria 6644
225 Ga0495612_0001891 3300053078 Bacteria 8614
226 Ga0500578_0012517 3300053086 Bacteria 5474
227 Ga0500566_0111129 3300053094 Bacteria 1489
228 Ga0500569_003539 3300053109 Bacteria 3202
229 Ga0500628_001316 3300053129 Bacteria 4289
230 Ga0500652_003837 3300053131 Bacteria 4593
231 Ga0500658_0004586 3300053134 Bacteria 5150
232 Ga0500559_0001172 3300053136 Bacteria 15712
233 Ga0500561_0000402 3300053137 Bacteria 7126
234 Ga0500588_0003862 3300053146 Bacteria 3203
235 Ga0500600_0007814 3300053149 Bacteria 6441
236 Ga0500633_0002024 3300053160 Bacteria 4050
237 Ga0500634_0003736 3300053161 Bacteria 6869
238 Ga0500587_000139 3300053739 Bacteria 6877
239 Ga0501084_0004679 3300054114 Bacteria 11174
240 Ga0501082_0011621 3300060353 Bacteria 7568
241 Ga0466962_0000963 3300061719 Bacteria 13083
242 Ga0466962_0006956 3300061719 Bacteria 5423
243 Ga0530510_0021176 3300061734 Bacteria 4625

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046529 Ga0495652_0008749 Ga0495652_0008749_23_1030 322
2 3300045836 Ga0466958_0119385 Ga0466958_0119385_11_1093 360
3 3300045976 Ga0466967_0282490 Ga0466967_0282490_14_1111 361
4 3300005937 Ga0081455_10000589 Ga0081455_1000058913 363
5 3300028794 Ga0307515_10142480 Ga0307515_101424802 368
6 3300005471 Ga0070698_100067663 Ga0070698_1000676632 369
7 3300030521 Ga0307511_10030082 Ga0307511_100300822 375
8 3300009094 Ga0111539_10093674 Ga0111539_100936744 377
9 3300005436 Ga0070713_100046158 Ga0070713_1000461585 384
10 3300025928 Ga0207700_10203229 Ga0207700_102032292 384
11 3300025929 Ga0207664_10051098 Ga0207664_100510983 384
12 3300038443 Ga0395901_0092264 Ga0395901_0092264_249_1463 384
13 3300046454 Ga0495592_0014447 Ga0495592_0014447_3331_4527 384
14 3300046809 Ga0495600_0046649 Ga0495600_0046649_1091_2287 384
15 3300049581 Ga0501047_0199814 Ga0501047_0199814_628_1815 384
16 3300031507 Ga0307509_10039300 Ga0307509_100393002 387
17 3300033179 Ga0307507_10000019 Ga0307507_10000019182 387
18 3300044656 Ga0466969_0013918 Ga0466969_0013918_1495_2691 387
19 3300044684 Ga0466966_0006290 Ga0466966_0006290_1679_2875 387
20 3300045049 Ga0466959_0010122 Ga0466959_0010122_601_1797 387
21 3300045836 Ga0466958_0011408 Ga0466958_0011408_1699_2895 387
22 3300046462 Ga0495651_0000951 Ga0495651_0000951_939_2135 387
23 3300046514 Ga0495618_0062945 Ga0495618_0062945_1101_2297 387
24 3300049578 Ga0501042_0087290 Ga0501042_0087290_239_1453 387
25 3300049581 Ga0501047_0000055 Ga0501047_0000055_2371_3585 387
26 3300020082 Ga0206353_11439385 Ga0206353_114393851 388
27 3300044842 Ga0466957_0034029 Ga0466957_0034029_420_1610 388
28 3300049571 Ga0501034_0005406 Ga0501034_0005406_2582_3811 389
29 3300049572 Ga0501036_0005698 Ga0501036_0005698_8776_10005 389
30 3300049573 Ga0501037_0021394 Ga0501037_0021394_193_1422 389
31 3300049574 Ga0501038_0000969 Ga0501038_0000969_5392_6621 389
32 3300049579 Ga0501043_0036240 Ga0501043_0036240_2492_3721 389
33 3300049580 Ga0501046_0079316 Ga0501046_0079316_1222_2451 389
34 3300049823 Ga0501044_0023962 Ga0501044_0023962_4256_5485 389
35 3300049824 Ga0501045_0227510 Ga0501045_0227510_48_1262 389
36 3300005842 Ga0068858_100000021 Ga0068858_10000002132 391
37 3300009177 Ga0105248_10002212 Ga0105248_1000221215 391
38 3300014968 Ga0157379_10000005 Ga0157379_10000005143 391
39 3300025941 Ga0207711_10001522 Ga0207711_1000152215 391
40 3300026035 Ga0207703_10000001 Ga0207703_10000001659 391
41 iso_pu_bacteria 2515154155 2515856962 391
42 iso_pu_bacteria 2643221601 2644017876 391
43 iso_pu_bacteria 2643221631 2644180836 391
44 iso_pu_bacteria 2791355406 2793981206 391
45 iso_pu_bacteria 2818991472 2819740162 391
46 iso_pu_bacteria 2862705112 2862707280 391
47 iso_pu_bacteria 2867369537 2867370461 391
48 iso_pu_bacteria 2990044586 2990044738 391
49 iso_pu_bacteria 2997600082 2997606755 391
50 iso_pu_bacteria 3002998708 3003009465 391
51 iso_pu_bacteria 3006425503 3006426406 391
52 iso_pu_bacteria 8008485437 8008489687 391
53 iso_pu_bacteria 8025524527 8025528737 391
54 iso_pu_bacteria 8047893842 8047899780 391
55 iso_pu_bacteria 8048127548 8048137448 391
56 iso_pu_bacteria 8048356638 8048359150 391
57 iso_pu_bacteria 8048369669 8048376728 391
58 iso_pu_bacteria 8048379754 8048385781 391
59 iso_pu_bacteria 8053945823 8053954007 391
60 iso_pu_bacteria 8056060235 8056065248 391
61 iso_pu_bacteria 2582581312 2585298666 392
62 iso_pu_bacteria 2758568522 2760307588 392
63 iso_pu_bacteria 2784746763 2785345158 392
64 iso_pu_bacteria 2811994880 2812365090 392
65 iso_pu_bacteria 2862290372 2862291570 392
66 iso_pu_bacteria 2862507626 2862508599 392
67 3300049572 Ga0501036_0028760 Ga0501036_0028760_1230_2417 393
68 iso_pu_bacteria 2767802112 2768646754 393
69 iso_pu_bacteria 2995463766 2995464878 393
70 3300003354 JGI25160J50197_1019797 JGI25160J50197_10197971 395
71 3300021388 Ga0213875_10003802 Ga0213875_100038023 395
72 3300025302 Ga0207426_1005349 Ga0207426_10053493 395
73 3300025916 Ga0207663_10143167 Ga0207663_101431671 395
74 3300028786 Ga0307517_10001088 Ga0307517_100010886 395
75 3300028786 Ga0307517_10142049 Ga0307517_101420492 395
76 3300031616 Ga0307508_10012169 Ga0307508_100121696 395
77 3300031649 Ga0307514_10119260 Ga0307514_101192601 395
78 3300031727 Ga0316576_10003068 Ga0316576_100030686 395
79 3300031728 Ga0316578_10101351 Ga0316578_101013512 395
80 3300031730 Ga0307516_10046955 Ga0307516_100469553 395
81 3300044656 Ga0466969_0003372 Ga0466969_0003372_569_1765 395
82 3300044684 Ga0466966_0006673 Ga0466966_0006673_4783_5970 395
83 3300044693 Ga0466961_0001045 Ga0466961_0001045_9884_11080 395
84 3300044693 Ga0466961_0123430 Ga0466961_0123430_271_1458 395
85 3300044719 Ga0466971_0000239 Ga0466971_0000239_4047_5243 395
86 3300045049 Ga0466959_0002974 Ga0466959_0002974_2637_3833 395
87 3300045049 Ga0466959_0020001 Ga0466959_0020001_146_1333 395
88 3300046455 Ga0495603_0079220 Ga0495603_0079220_66_1271 395
89 3300046463 Ga0495653_0032195 Ga0495653_0032195_1500_2705 395
90 3300046476 Ga0495662_0008597 Ga0495662_0008597_1671_2876 395
91 3300046477 Ga0495664_0054470 Ga0495664_0054470_148_1353 395
92 3300046511 Ga0495608_0029607 Ga0495608_0029607_2361_3566 395
93 3300046516 Ga0495628_0008064 Ga0495628_0008064_1086_2291 395
94 3300046522 Ga0495643_0005478 Ga0495643_0005478_2660_3862 395
95 3300046526 Ga0495666_0004042 Ga0495666_0004042_1026_2231 395
96 3300046529 Ga0495652_0028900 Ga0495652_0028900_2877_4082 395
97 3300046531 Ga0495665_0002726 Ga0495665_0002726_2099_3304 395
98 3300046533 Ga0495640_0015320 Ga0495640_0015320_2835_4040 395
99 3300046543 Ga0495645_0050883 Ga0495645_0050883_1146_2351 395
100 3300046559 Ga0495667_0004232 Ga0495667_0004232_8231_9436 395
101 3300046663 Ga0495635_0012243 Ga0495635_0012243_3787_4992 395
102 3300046663 Ga0495635_0033027 Ga0495635_0033027_1554_2750 395
103 3300046675 Ga0495657_0008203 Ga0495657_0008203_2781_3986 395
104 3300046678 Ga0495599_0029959 Ga0495599_0029959_811_2016 395
105 3300046679 Ga0495623_0065408 Ga0495623_0065408_834_2039 395
106 3300046680 Ga0495646_0001474 Ga0495646_0001474_11277_12482 395
107 3300046683 Ga0495658_0067312 Ga0495658_0067312_678_1880 395
108 3300046689 Ga0495613_0005162 Ga0495613_0005162_4852_6057 395
109 3300046691 Ga0495670_0006962 Ga0495670_0006962_2171_3373 395
110 3300047315 Ga0495581_0005694 Ga0495581_0005694_4747_5952 395
111 3300047315 Ga0495581_0033050 Ga0495581_0033050_1132_2334 395
112 3300047317 Ga0495604_0001110 Ga0495604_0001110_13479_14684 395
113 3300047317 Ga0495604_0031399 Ga0495604_0031399_1705_2910 395
114 3300047319 Ga0495674_0065960 Ga0495674_0065960_1146_2351 395
115 3300047323 Ga0495683_0012851 Ga0495683_0012851_1264_2466 395
116 3300047443 Ga0495687_076040 Ga0495687_076040_109_1311 395
117 3300047444 Ga0495675_0021351 Ga0495675_0021351_1615_2820 395
118 3300047446 Ga0495679_007428 Ga0495679_007428_2273_3475 395
119 3300047447 Ga0495685_001548 Ga0495685_001548_1183_2385 395
120 3300047447 Ga0495685_016884 Ga0495685_016884_226_1488 395
121 3300047470 Ga0495681_0003148 Ga0495681_0003148_4683_5885 395
122 3300047471 Ga0495684_0043274 Ga0495684_0043274_811_2016 395
123 3300047673 Ga0495593_0044463 Ga0495593_0044463_905_2110 395
124 3300049539 Ga0501323_000129 Ga0501323_000129_1197_2402 395
125 3300049568 Ga0501031_0003626 Ga0501031_0003626_1853_3040 395
126 3300049570 Ga0501033_0000910 Ga0501033_0000910_1614_2801 395
127 3300049573 Ga0501037_0007143 Ga0501037_0007143_83_1270 395
128 3300049575 Ga0501039_0001327 Ga0501039_0001327_2527_3714 395
129 3300049576 Ga0501040_0033263 Ga0501040_0033263_1136_2323 395
130 3300049580 Ga0501046_0004888 Ga0501046_0004888_9031_10218 395
131 3300049581 Ga0501047_0016714 Ga0501047_0016714_3970_5157 395
132 3300049582 Ga0501048_0000409 Ga0501048_0000409_2299_3486 395
133 3300049583 Ga0501067_0042303 Ga0501067_0042303_880_2067 395
134 3300049585 Ga0501069_0000147 Ga0501069_0000147_2119_3306 395
135 3300049586 Ga0501070_0186616 Ga0501070_0186616_198_1388 395
136 3300049589 Ga0501073_0011596 Ga0501073_0011596_1410_2597 395
137 3300049590 Ga0501074_0000206 Ga0501074_0000206_5496_6683 395
138 3300049593 Ga0501077_0144528 Ga0501077_0144528_69_1256 395
139 3300049742 Ga0501080_0000118 Ga0501080_0000118_26765_27952 395
140 3300053077 Ga0495601_0006921 Ga0495601_0006921_1145_2350 395
141 3300053078 Ga0495612_0001891 Ga0495612_0001891_5752_6948 395
142 3300053086 Ga0500578_0012517 Ga0500578_0012517_3988_5190 395
143 3300053094 Ga0500566_0111129 Ga0500566_0111129_65_1267 395
144 3300053109 Ga0500569_003539 Ga0500569_003539_869_2071 395
145 3300053129 Ga0500628_001316 Ga0500628_001316_2037_3239 395
146 3300053131 Ga0500652_003837 Ga0500652_003837_1841_3043 395
147 3300053134 Ga0500658_0004586 Ga0500658_0004586_2716_3918 395
148 3300053137 Ga0500561_0000402 Ga0500561_0000402_1249_2451 395
149 3300053146 Ga0500588_0003862 Ga0500588_0003862_201_1403 395
150 3300053149 Ga0500600_0007814 Ga0500600_0007814_412_1614 395
151 3300053160 Ga0500633_0002024 Ga0500633_0002024_1595_2797 395
152 3300053161 Ga0500634_0003736 Ga0500634_0003736_1132_2334 395
153 3300053739 Ga0500587_000139 Ga0500587_000139_4432_5634 395
154 3300061719 Ga0466962_0006956 Ga0466962_0006956_2566_3762 395
155 3300005564 Ga0070664_100046261 Ga0070664_1000462612 396
156 3300025945 Ga0207679_10012019 Ga0207679_100120192 396
157 3300031649 Ga0307514_10014261 Ga0307514_100142616 396
158 3300031730 Ga0307516_10010050 Ga0307516_100100504 396
159 3300033180 Ga0307510_10019153 Ga0307510_100191538 396
160 3300037471 Ga0395905_0034140 Ga0395905_0034140_1522_2727 396
161 3300044765 Ga0466970_0096419 Ga0466970_0096419_249_1463 396
162 3300046499 Ga0495594_0013189 Ga0495594_0013189_959_2170 396
163 3300046648 Ga0495611_0009712 Ga0495611_0009712_2656_3867 396
164 3300046794 Ga0495589_0055377 Ga0495589_0055377_152_1363 396
165 3300047318 Ga0495636_0017305 Ga0495636_0017305_1493_2704 396
166 3300048089 Ga0495614_0000173 Ga0495614_0000173_13928_15139 396
167 3300049569 Ga0501032_0123149 Ga0501032_0123149_323_1534 396
168 3300049570 Ga0501033_0004714 Ga0501033_0004714_6171_7361 396
169 3300049571 Ga0501034_0006469 Ga0501034_0006469_9333_10523 396
170 3300049571 Ga0501034_0062457 Ga0501034_0062457_1092_2303 396
171 3300049572 Ga0501036_0003650 Ga0501036_0003650_8958_10148 396
172 3300049573 Ga0501037_0019439 Ga0501037_0019439_1765_2955 396
173 3300049573 Ga0501037_0031970 Ga0501037_0031970_2188_3399 396
174 3300049578 Ga0501042_0009235 Ga0501042_0009235_2139_3329 396
175 3300049579 Ga0501043_0001261 Ga0501043_0001261_18919_20109 396
176 3300049579 Ga0501043_0039566 Ga0501043_0039566_1785_2996 396
177 3300049581 Ga0501047_0002649 Ga0501047_0002649_13709_14899 396
178 3300049581 Ga0501047_0007554 Ga0501047_0007554_4840_6051 396
179 3300049582 Ga0501048_0011125 Ga0501048_0011125_1642_2832 396
180 3300049586 Ga0501070_0033530 Ga0501070_0033530_893_2104 396
181 3300049589 Ga0501073_0072803 Ga0501073_0072803_488_1678 396
182 3300049590 Ga0501074_0044596 Ga0501074_0044596_312_1502 396
183 3300049824 Ga0501045_0040868 Ga0501045_0040868_1974_3185 396
184 3300053136 Ga0500559_0001172 Ga0500559_0001172_3177_4382 396
185 iso_pu_bacteria 2808606522 2809588544 396
186 iso_pu_bacteria 2915768154 2915770313 396
187 iso_pu_bacteria 8033684223 8033690090 396
188 3300044656 Ga0466969_0000609 Ga0466969_0000609_1494_2711 397
189 3300044656 Ga0466969_0004909 Ga0466969_0004909_2847_4064 397
190 3300044683 Ga0466965_0001100 Ga0466965_0001100_2246_3454 397
191 3300044684 Ga0466966_0007366 Ga0466966_0007366_1967_3184 397
192 3300044693 Ga0466961_0007087 Ga0466961_0007087_4482_5699 397
193 3300044693 Ga0466961_0038356 Ga0466961_0038356_466_1683 397
194 3300044693 Ga0466961_0121589 Ga0466961_0121589_109_1317 397
195 3300044719 Ga0466971_0003435 Ga0466971_0003435_4248_5465 397
196 3300044765 Ga0466970_0009460 Ga0466970_0009460_31_1239 397
197 3300044842 Ga0466957_0124409 Ga0466957_0124409_122_1330 397
198 3300045049 Ga0466959_0016829 Ga0466959_0016829_2423_3640 397
199 3300045049 Ga0466959_0028636 Ga0466959_0028636_2795_4012 397
200 3300045976 Ga0466967_0151789 Ga0466967_0151789_395_1609 397
201 3300045976 Ga0466967_0182633 Ga0466967_0182633_639_1847 397
202 3300046455 Ga0495603_0019743 Ga0495603_0019743_74_1288 397
203 3300046459 Ga0495629_0023184 Ga0495629_0023184_1943_3157 397
204 3300046462 Ga0495651_0035043 Ga0495651_0035043_1860_3074 397
205 3300046533 Ga0495640_0002187 Ga0495640_0002187_10525_11739 397
206 3300046533 Ga0495640_0041507 Ga0495640_0041507_1097_2320 397
207 3300046642 Ga0495634_0005480 Ga0495634_0005480_1538_2752 397
208 3300046689 Ga0495613_0005151 Ga0495613_0005151_2894_4108 397
209 3300046809 Ga0495600_0005309 Ga0495600_0005309_1747_2961 397
210 3300047321 Ga0495676_0004427 Ga0495676_0004427_11308_12522 397
211 3300047444 Ga0495675_0041122 Ga0495675_0041122_84_1298 397
212 3300049568 Ga0501031_0019436 Ga0501031_0019436_1575_2789 397
213 3300049568 Ga0501031_0103349 Ga0501031_0103349_41_1255 397
214 3300049569 Ga0501032_0018060 Ga0501032_0018060_3195_4409 397
215 3300049569 Ga0501032_0023987 Ga0501032_0023987_45_1259 397
216 3300049570 Ga0501033_0029389 Ga0501033_0029389_1139_2353 397
217 3300049570 Ga0501033_0046859 Ga0501033_0046859_845_2059 397
218 3300049571 Ga0501034_0016403 Ga0501034_0016403_3339_4553 397
219 3300049572 Ga0501036_0024228 Ga0501036_0024228_3224_4438 397
220 3300049572 Ga0501036_0033927 Ga0501036_0033927_664_1878 397
221 3300049573 Ga0501037_0006158 Ga0501037_0006158_2924_4138 397
222 3300049574 Ga0501038_0029942 Ga0501038_0029942_678_1892 397
223 3300049574 Ga0501038_0032768 Ga0501038_0032768_2832_4046 397
224 3300049575 Ga0501039_0163442 Ga0501039_0163442_187_1401 397
225 3300049576 Ga0501040_0006055 Ga0501040_0006055_1770_2984 397
226 3300049577 Ga0501041_0000921 Ga0501041_0000921_12737_13951 397
227 3300049578 Ga0501042_0015840 Ga0501042_0015840_2738_3952 397
228 3300049579 Ga0501043_0001521 Ga0501043_0001521_3232_4446 397
229 3300049579 Ga0501043_0026003 Ga0501043_0026003_524_1738 397
230 3300049580 Ga0501046_0003705 Ga0501046_0003705_3450_4664 397
231 3300049581 Ga0501047_0001216 Ga0501047_0001216_10066_11280 397
232 3300049582 Ga0501048_0000969 Ga0501048_0000969_16210_17424 397
233 3300049583 Ga0501067_0008010 Ga0501067_0008010_3234_4448 397
234 3300049584 Ga0501068_0000061 Ga0501068_0000061_24860_26074 397
235 3300049585 Ga0501069_0056515 Ga0501069_0056515_678_1892 397
236 3300049586 Ga0501070_0012414 Ga0501070_0012414_2310_3524 397
237 3300049587 Ga0501071_0009461 Ga0501071_0009461_423_1637 397
238 3300049588 Ga0501072_0009466 Ga0501072_0009466_4868_6082 397
239 3300049589 Ga0501073_0014547 Ga0501073_0014547_2928_4142 397
240 3300049590 Ga0501074_0014896 Ga0501074_0014896_1263_2477 397
241 3300049592 Ga0501076_0006682 Ga0501076_0006682_3263_4477 397
242 3300049593 Ga0501077_0015525 Ga0501077_0015525_1880_3094 397
243 3300049741 Ga0501079_0005055 Ga0501079_0005055_5150_6364 397
244 3300049742 Ga0501080_0033227 Ga0501080_0033227_645_1859 397
245 3300049744 Ga0501083_0001007 Ga0501083_0001007_15921_17135 397
246 3300049822 Ga0501035_0001929 Ga0501035_0001929_3817_5031 397
247 3300049822 Ga0501035_0011028 Ga0501035_0011028_5362_6576 397
248 3300049822 Ga0501035_0014422 Ga0501035_0014422_6062_7276 397
249 3300049823 Ga0501044_0002944 Ga0501044_0002944_14962_16176 397
250 3300049823 Ga0501044_0009389 Ga0501044_0009389_6526_7740 397
251 3300049823 Ga0501044_0137418 Ga0501044_0137418_639_1853 397
252 3300049824 Ga0501045_0020806 Ga0501045_0020806_1642_2856 397
253 3300054114 Ga0501084_0004679 Ga0501084_0004679_5023_6237 397
254 3300060353 Ga0501082_0011621 Ga0501082_0011621_3792_5006 397
255 3300061719 Ga0466962_0000963 Ga0466962_0000963_10579_11796 397
256 3300061734 Ga0530510_0021176 Ga0530510_0021176_816_2030 397
257 3300031838 Ga0307518_10000054 Ga0307518_1000005456 398
258 3300045976 Ga0466967_0018579 Ga0466967_0018579_2417_3622 398
259 3300046459 Ga0495629_0078256 Ga0495629_0078256_953_2170 398
260 3300005327 Ga0070658_10201185 Ga0070658_102011852 400
261 3300005366 Ga0070659_100023295 Ga0070659_1000232954 400
262 3300025904 Ga0207647_10012752 Ga0207647_100127522 400
263 3300025909 Ga0207705_10100870 Ga0207705_101008702 400
264 3300025919 Ga0207657_10001763 Ga0207657_1000176321 400
265 3300049580 Ga0501046_0010494 Ga0501046_0010494_2530_3744 400
266 3300044694 Ga0466963_0113936 Ga0466963_0113936_104_1318 402
267 3300044706 Ga0466964_0023074 Ga0466964_0023074_677_1891 402
268 3300044842 Ga0466957_0114335 Ga0466957_0114335_404_1618 402
269 3300005471 Ga0070698_100008110 Ga0070698_10000811010 403
270 3300045976 Ga0466967_0026634 Ga0466967_0026634_1876_3105 403
271 3300006038 Ga0075365_10023828 Ga0075365_100238282 404
272 3300009098 Ga0105245_10234852 Ga0105245_102348521 407
273 3300002075 JGI24738J21930_10004130 JGI24738J21930_100041306 408
274 3300009148 Ga0105243_10005196 Ga0105243_100051969 408

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00162

PGK

Phosphoglycerate kinase

23

410

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q3v-assembly1.cif.gz_A crystal structure of phosphoglycerate kinase from campylobacter jejuni. 0.9659 15 402
1php-assembly1.cif.gz_A structure of the adp complex of the 3-phosphoglycerate kinase from bacillus stearothermophilus at 1.65 angstroms 0.956 14 402
3q3v-assembly2.cif.gz_B crystal structure of phosphoglycerate kinase from campylobacter jejuni. 0.9549 14 402
3uwd-assembly1.cif.gz_A crystal structure of phosphoglycerate kinase from bacillus anthracis 0.9541 14 402
1v6s-assembly2.cif.gz_B crystal structure of phosphoglycerate kinase from thermus thermophilus hb8 0.9489 14 403
ID Description Score Start End Superfamily
af_P9WID1_1_181_3.40.50.1260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9751 14 178 3.40.50.1260
af_A0A0P0V994_190_315_3.40.50.1260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9708 192 319 3.40.50.1260
3q3vB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9677 186 391 3.40.50.1260
af_P9WID1_191_392_3.40.50.1260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9632 189 391 3.40.50.1260
af_P0A799_178_379_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.962 191 399 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A6G3WZ45-F1-model_v4 Phosphoglycerate kinase (EC 2.7.2.3) 0.9884 158 266 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-A0A2V2QFB3-F1-model_v4 deleted 0.9863 55 403
AF-A0A6J6IVX2-F1-model_v4 phosphoglycerate kinase (EC 2.7.2.3) 0.9821 269 402 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-A0A349PT96-F1-model_v4 phosphoglycerate kinase (EC 2.7.2.3) 0.9808 226 402 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-A0A6G3WZ45-F1-model_v4 Phosphoglycerate kinase (EC 2.7.2.3) 0.9795 158 266 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531

Feature Viewer

pLDDT pTM Quality
92.26 0.84 High
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Predicted Structure (AlphaFold2)

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