F379611

General Info

Members Datasets Scaffolds Average Seq Length
274 154 274 509

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100034455|Ga0068860_1000344551
Length 553
Sequence MLLPLLTVTEIGYYSIQIFSIEDNLKMSTLLHRFFFGKPTRNIINSILLLCFCGLASAQDGTAQQKVTANAGSLSGNWAVKVPKADGTNQWAYFNLTQDGSKITGSIRVTQFYYTISESTGGAESFTITGTMRDGKSDRTVKYEGKLMGDELHLSTRRRPEDKPTESIAKRVPDGEGAMPARLPLPALHKVPYNGLAKSPPMGWNSWNKFKSGVNDQVVREIADAMVASGMKDAGYQYINIDDTWESERDAKGNITSNKKFPDMKALADYVHSKGLKLGIYSSPGPNTCAGYEGSFGHEEQDARTFAAWGIDYLKYDWCGARNLYTDEEMPAVYQKMGDALLATKRPIVYSLCQYGRLDVWKWGADVGGNLWRTTGDISDRWDSMTRIGFGQNDLAPFATAGHWNDPDMLEIGNGAMTDAEYRTHMSLWALLAAPLLAGNDLRDMTSATKDILLNREVIAVNQDKGARQGKRVSQSGDQEIWVRELADNDLAIGIFNRGSASADVIVRWVDIGVKRKVKRVRDLWEKKDVKVDDPAYKLTVPSHGVVLLRVNK

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
122 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
123 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
124 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
125 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
126 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
127 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
128 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
129 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
130 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
131 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
132 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
133 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
134 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
135 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
136 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
137 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
138 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
141 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
151 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 1.09
Rhizosphere 98.18
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000027 3300002074 Bacteria 93866
2 JGI24034J26672_10000009 3300002239 Bacteria 160533
3 JGI24034J26672_10000029 3300002239 Bacteria 101926
4 Ga0065714_10064432 3300005288 Bacteria 133542
5 Ga0065712_10067730 3300005290 Bacteria 133482
6 Ga0065712_10116895 3300005290 Bacteria 1728
7 Ga0065715_10001351 3300005293 Bacteria 7598
8 Ga0070658_10049460 3300005327 Bacteria 3406
9 Ga0068869_100012097 3300005334 Bacteria 5690
10 Ga0070666_10043392 3300005335 Bacteria 3011
11 Ga0070680_100006352 3300005336 Bacteria 8974
12 Ga0068868_100009818 3300005338 Bacteria 6907
13 Ga0070689_100176508 3300005340 Unclassified 1733
14 Ga0070687_100002222 3300005343 Bacteria 7196
15 Ga0070668_100064053 3300005347 Bacteria 2850
16 Ga0070671_100083414 3300005355 Unclassified 2672
17 Ga0070673_100059026 3300005364 Bacteria 3036
18 Ga0070673_100109979 3300005364 Bacteria 2284
19 Ga0070667_100038043 3300005367 Unclassified 4034
20 Ga0070709_10002516 3300005434 Bacteria 9926
21 Ga0070714_100000715 3300005435 Bacteria 23534
22 Ga0070714_100171827 3300005435 Bacteria 1967
23 Ga0070713_100004775 3300005436 Bacteria 9172
24 Ga0070713_100024129 3300005436 Bacteria 4732
25 Ga0070701_10027998 3300005438 Bacteria 2767
26 Ga0070705_100003094 3300005440 Bacteria 8183
27 Ga0070705_100012624 3300005440 Bacteria 4299
28 Ga0070700_100050194 3300005441 Bacteria 2593
29 Ga0070700_100088550 3300005441 Bacteria 2015
30 Ga0070694_100001166 3300005444 Bacteria 15122
31 Ga0070708_100000380 3300005445 Bacteria 33505
32 Ga0070708_100007009 3300005445 Bacteria 8988
33 Ga0070708_100068321 3300005445 Bacteria 3194
34 Ga0070708_100108187 3300005445 Bacteria 2553
35 Ga0070681_10002436 3300005458 Bacteria 17023
36 Ga0070681_10010968 3300005458 Bacteria 8962
37 Ga0070706_100000424 3300005467 Bacteria 50891
38 Ga0070706_100009691 3300005467 Bacteria 8952
39 Ga0070706_100020471 3300005467 Bacteria 6097
40 Ga0070706_100051797 3300005467 Bacteria 3790
41 Ga0070706_100070733 3300005467 Bacteria 3227
42 Ga0070707_100000375 3300005468 Bacteria 44194
43 Ga0070707_100005086 3300005468 Bacteria 12326
44 Ga0070707_100032030 3300005468 Bacteria 5008
45 Ga0070707_100051281 3300005468 Bacteria 3956
46 Ga0070707_100094255 3300005468 Bacteria 2899
47 Ga0070707_100175800 3300005468 Bacteria 2087
48 Ga0070698_100005095 3300005471 Bacteria 14392
49 Ga0070698_100073246 3300005471 Bacteria 3432
50 Ga0070699_100003088 3300005518 Bacteria 14752
51 Ga0070679_100010056 3300005530 Bacteria 8962
52 Ga0070679_100015611 3300005530 Bacteria 7298
53 Ga0070679_100047289 3300005530 Bacteria 4289
54 Ga0070684_100060154 3300005535 Bacteria 3322
55 Ga0070697_100000048 3300005536 Bacteria 90644
56 Ga0070697_100005979 3300005536 Bacteria 9408
57 Ga0070697_100009654 3300005536 Bacteria 7538
58 Ga0070697_100022243 3300005536 Bacteria 5032
59 Ga0070697_100031119 3300005536 Bacteria 4290
60 Ga0070697_100045141 3300005536 Unclassified 3571
61 Ga0068853_100006121 3300005539 Bacteria 9527
62 Ga0068853_100100910 3300005539 Bacteria 2552
63 Ga0070686_100005066 3300005544 Bacteria 7274
64 Ga0070696_100002419 3300005546 Bacteria 12367
65 Ga0070696_100039837 3300005546 Bacteria 3244
66 Ga0070696_100056241 3300005546 Bacteria 2744
67 Ga0070696_100142515 3300005546 Bacteria 1753
68 Ga0070693_100000012 3300005547 Bacteria 71975
69 Ga0070665_100238606 3300005548 Bacteria 1819
70 Ga0070704_100000650 3300005549 Bacteria 16774
71 Ga0070704_100138576 3300005549 Bacteria 1896
72 Ga0068855_100107030 3300005563 Bacteria 3213
73 Ga0070664_100074208 3300005564 Bacteria 2919
74 Ga0068857_100038492 3300005577 Bacteria 4235
75 Ga0068857_100114392 3300005577 Bacteria 2426
76 Ga0068854_100131220 3300005578 Bacteria 1914
77 Ga0068856_100024947 3300005614 Bacteria 5826
78 Ga0068852_100069393 3300005616 Bacteria 3089
79 Ga0068859_100158235 3300005617 Bacteria 2344
80 Ga0068859_100203180 3300005617 Bacteria 2066
81 Ga0068863_100104508 3300005841 Bacteria 2694
82 Ga0068858_100000085 3300005842 Bacteria 97757
83 Ga0068858_100018062 3300005842 Bacteria 6605
84 Ga0068858_100019901 3300005842 Bacteria 6274
85 Ga0068858_100097811 3300005842 Bacteria 2736
86 Ga0068860_100010447 3300005843 Bacteria 9178
87 Ga0068860_100025707 3300005843 Bacteria 5678
88 Ga0068860_100034455 3300005843 Bacteria 4856
89 Ga0068860_100074999 3300005843 Bacteria 3217
90 Ga0081539_10000481 3300005985 Bacteria 84382
91 Ga0070717_10033516 3300006028 Bacteria 4144
92 Ga0070717_10046845 3300006028 Bacteria 3539
93 Ga0070715_10000017 3300006163 Bacteria 132686
94 Ga0070716_100000005 3300006173 Bacteria 273485
95 Ga0070716_100000269 3300006173 Bacteria 20898
96 Ga0070712_100087610 3300006175 Bacteria 2272
97 Ga0068871_100008148 3300006358 Bacteria 7527
98 Ga0068871_100011884 3300006358 Bacteria 6405
99 Ga0075434_100195318 3300006871 Bacteria 2043
100 Ga0075429_100096736 3300006880 Bacteria 2576
101 Ga0075436_100005151 3300006914 Bacteria 8999
102 Ga0097620_100158240 3300006931 Bacteria 2344
103 Ga0097620_100203167 3300006931 Bacteria 2066
104 Ga0075435_100000325 3300007076 Bacteria 29372
105 Ga0105240_10000782 3300009093 Bacteria 57623
106 Ga0105240_10001614 3300009093 Bacteria 38227
107 Ga0105240_10037379 3300009093 Bacteria 6241
108 Ga0105240_10234889 3300009093 Bacteria 2128
109 Ga0111539_10025510 3300009094 Bacteria 7247
110 Ga0111539_10097259 3300009094 Bacteria 3458
111 Ga0105245_10075720 3300009098 Bacteria 3064
112 Ga0105247_10000039 3300009101 Bacteria 160675
113 Ga0105247_10010969 3300009101 Bacteria 5471
114 Ga0105247_10052638 3300009101 Unclassified 2511
115 Ga0114129_10027953 3300009147 Bacteria 7986
116 Ga0114129_10069250 3300009147 Bacteria 4918
117 Ga0114129_10206823 3300009147 Bacteria 2655
118 Ga0114129_10371967 3300009147 Bacteria 1889
119 Ga0105243_10000187 3300009148 Bacteria 72048
120 Ga0105243_10020269 3300009148 Bacteria 5042
121 Ga0105242_10000008 3300009176 Bacteria 172348
122 Ga0105242_10000204 3300009176 Bacteria 46259
123 Ga0105242_10076648 3300009176 Bacteria 2788
124 Ga0105248_10033384 3300009177 Bacteria 5749
125 Ga0105248_10090575 3300009177 Bacteria 3444
126 Ga0105237_10009592 3300009545 Bacteria 10365
127 Ga0105238_10015960 3300009551 Bacteria 7600
128 Ga0105249_10032443 3300009553 Unclassified 4725
129 Ga0105239_10105967 3300010375 Bacteria 3114
130 Ga0157373_10044456 3300013100 Bacteria 3170
131 Ga0157369_10075313 3300013105 Bacteria 3619
132 Ga0157374_10027590 3300013296 Bacteria 5125
133 Ga0157374_10210282 3300013296 Unclassified 1907
134 Ga0157378_10012825 3300013297 Bacteria 7335
135 Ga0157378_10116181 3300013297 Unclassified 2460
136 Ga0163162_10011802 3300013306 Bacteria 8521
137 Ga0163162_10013332 3300013306 Bacteria 8029
138 Ga0163162_10047477 3300013306 Bacteria 4303
139 Ga0163162_10094618 3300013306 Bacteria 3074
140 Ga0163162_10121437 3300013306 Bacteria 2717
141 Ga0157372_10000564 3300013307 Bacteria 40762
142 Ga0157372_10035777 3300013307 Bacteria 5468
143 Ga0157375_10031675 3300013308 Bacteria 5005
144 Ga0157375_10244409 3300013308 Unclassified 1954
145 Ga0157375_10324843 3300013308 Bacteria 1703
146 Ga0157375_10325785 3300013308 Unclassified 1701
147 Ga0163163_10006193 3300014325 Bacteria 10433
148 Ga0163163_10086962 3300014325 Bacteria 3135
149 Ga0163163_10093525 3300014325 Bacteria 3023
150 Ga0157380_10005589 3300014326 Bacteria 8781
151 Ga0157380_10061482 3300014326 Bacteria 3006
152 Ga0207653_10023798 3300025885 Bacteria 1953
153 Ga0207642_10011255 3300025899 Bacteria 3184
154 Ga0207710_10000001 3300025900 Bacteria 1797433
155 Ga0207710_10002057 3300025900 Bacteria 9539
156 Ga0207647_10000445 3300025904 Bacteria 33611
157 Ga0207685_10000017 3300025905 Bacteria 146902
158 Ga0207699_10001711 3300025906 Bacteria 10391
159 Ga0207705_10032225 3300025909 Bacteria 3745
160 Ga0207684_10000004 3300025910 Bacteria 755956
161 Ga0207684_10050298 3300025910 Bacteria 3535
162 Ga0207684_10053923 3300025910 Bacteria 3412
163 Ga0207707_10000461 3300025912 Bacteria 42164
164 Ga0207707_10001201 3300025912 Bacteria 24373
165 Ga0207695_10002783 3300025913 Bacteria 25454
166 Ga0207695_10008802 3300025913 Bacteria 12578
167 Ga0207671_10019355 3300025914 Bacteria 5204
168 Ga0207671_10103489 3300025914 Bacteria 2159
169 Ga0207693_10082364 3300025915 Bacteria 2520
170 Ga0207660_10004538 3300025917 Bacteria 9055
171 Ga0207660_10019162 3300025917 Bacteria 4570
172 Ga0207662_10001431 3300025918 Bacteria 11568
173 Ga0207652_10007097 3300025921 Bacteria 9027
174 Ga0207652_10102550 3300025921 Bacteria 2529
175 Ga0207646_10000675 3300025922 Bacteria 44213
176 Ga0207646_10020995 3300025922 Bacteria 6039
177 Ga0207646_10042392 3300025922 Bacteria 4088
178 Ga0207646_10046256 3300025922 Bacteria 3904
179 Ga0207694_10030115 3300025924 Bacteria 4144
180 Ga0207694_10202689 3300025924 Bacteria 1615
181 Ga0207700_10002775 3300025928 Bacteria 10092
182 Ga0207700_10055109 3300025928 Bacteria 2988
183 Ga0207664_10007135 3300025929 Bacteria 7747
184 Ga0207664_10138800 3300025929 Bacteria 2054
185 Ga0207644_10006893 3300025931 Bacteria 7399
186 Ga0207686_10000023 3300025934 Bacteria 172422
187 Ga0207686_10000253 3300025934 Bacteria 40811
188 Ga0207686_10039562 3300025934 Bacteria 2862
189 Ga0207709_10000062 3300025935 Bacteria 194534
190 Ga0207665_10000012 3300025939 Bacteria 143062
191 Ga0207665_10000015 3300025939 Bacteria 133147
192 Ga0207711_10045502 3300025941 Bacteria 3751
193 Ga0207711_10067064 3300025941 Unclassified 3105
194 Ga0207689_10034257 3300025942 Bacteria 4218
195 Ga0207689_10043466 3300025942 Bacteria 3714
196 Ga0207667_10112106 3300025949 Bacteria 2813
197 Ga0207712_10005951 3300025961 Bacteria 7693
198 Ga0207712_10100586 3300025961 Bacteria 2148
199 Ga0207668_10126597 3300025972 Bacteria 1944
200 Ga0207677_10013444 3300026023 Bacteria 4745
201 Ga0207703_10000024 3300026035 Bacteria 217968
202 Ga0207703_10018415 3300026035 Bacteria 5453
203 Ga0207703_10136109 3300026035 Bacteria 2127
204 Ga0207639_10055428 3300026041 Bacteria 3034
205 Ga0207708_10001618 3300026075 Bacteria 16782
206 Ga0207708_10007554 3300026075 Bacteria 8039
207 Ga0207641_10035465 3300026088 Unclassified 4155
208 Ga0207641_10098574 3300026088 Bacteria 2570
209 Ga0207641_10104314 3300026088 Bacteria 2503
210 Ga0207648_10175445 3300026089 Bacteria 1895
211 Ga0207674_10010772 3300026116 Bacteria 10314
212 Ga0207674_10017934 3300026116 Bacteria 7714
213 Ga0207675_100005752 3300026118 Bacteria 11861
214 Ga0207698_10037426 3300026142 Bacteria 3574
215 Ga0209588_1024122 3300027671 Bacteria 1920
216 Ga0207428_10004541 3300027907 Bacteria 13160
217 Ga0207428_10019914 3300027907 Bacteria 5714
218 Ga0268264_10010138 3300028381 Bacteria 7797
219 Ga0268264_10015454 3300028381 Bacteria 6259
220 Ga0268264_10029098 3300028381 Bacteria 4524
221 Ga0268264_10050380 3300028381 Unclassified 3467
222 Ga0268264_10139055 3300028381 Bacteria 2163
223 Ga0265337_1005175 3300028556 Bacteria 5236
224 Ga0265319_1003127 3300028563 Bacteria 8737
225 Ga0265334_10015543 3300028573 Bacteria 3160
226 Ga0265318_10004343 3300028577 Bacteria 6886
227 Ga0265323_10000168 3300028653 Bacteria 39169
228 Ga0265323_10005380 3300028653 Bacteria 5439
229 Ga0265323_10016236 3300028653 Bacteria 2911
230 Ga0265322_10019798 3300028654 Bacteria 1930
231 Ga0265336_10000660 3300028666 Bacteria 18786
232 Ga0265338_10000468 3300028800 Bacteria 72027
233 Ga0265338_10002096 3300028800 Bacteria 30782
234 Ga0265324_10000900 3300029957 Bacteria 18913
235 Ga0265328_10015246 3300031239 Bacteria 3015
236 Ga0265320_10000706 3300031240 Bacteria 25496
237 Ga0265320_10002721 3300031240 Bacteria 12225
238 Ga0265320_10023723 3300031240 Bacteria 3258
239 Ga0265320_10025633 3300031240 Bacteria 3097
240 Ga0265340_10004205 3300031247 Bacteria 8072
241 Ga0265339_10052057 3300031249 Bacteria 2232
242 Ga0265327_10001486 3300031251 Bacteria 29153
243 Ga0265316_10028290 3300031344 Bacteria 4626
244 Ga0265313_10008931 3300031595 Bacteria 6580
245 Ga0265313_10014793 3300031595 Bacteria 4588
246 Ga0265314_10006880 3300031711 Bacteria 9963
247 Ga0265314_10009353 3300031711 Bacteria 8292
248 Ga0265342_10015104 3300031712 Bacteria 5094
249 Ga0395905_0036075 3300037471 Bacteria 4644
250 Ga0436364_0175627 3300037853 Bacteria 26156
251 Ga0395901_0308704 3300038443 Bacteria 1639
252 Ga0451576_0160403 3300045051 Bacteria 2347
253 Ga0496104_0234886 3300048907 Bacteria 1745
254 Ga0496106_0005208 3300048909 Bacteria 9631
255 Ga0496112_0249152 3300048915 Bacteria 1728
256 nmdc:mga05p37_101946_c1 3300050507 Bacteria 3534
257 nmdc:mga05p37_102424_c1 3300050507 Bacteria 3526
258 nmdc:mga05p37_113121_c1 3300050507 Bacteria 3337
259 nmdc:mga05p37_254608_c1 3300050507 Unclassified 2104
260 nmdc:mga05p37_271292_c1 3300050507 Bacteria 2027
261 nmdc:mga05p37_283561_c1 3300050507 Bacteria 1974
262 nmdc:mga05p37_455_c1 3300050507 Bacteria 44549
263 nmdc:mga09592_132074_c1 3300050508 Bacteria 2149
264 nmdc:mga08y16_2372_c1 3300050511 Bacteria 19350
265 nmdc:mga08y16_71928_c1 3300050511 Bacteria 3604
266 nmdc:mga0n895_216983_c1 3300050512 Bacteria 1942
267 nmdc:mga0n895_276481_c1 3300050512 Bacteria 1703
268 nmdc:mga0rr50_1414_c1 3300050513 Bacteria 13153
269 nmdc:mga08x19_16_c1 3300050514 Bacteria 348119
270 nmdc:mga08x19_21093_c1 3300050514 Bacteria 4018
271 nmdc:mga0a205_237494_c1 3300050515 Unclassified 1704
272 nmdc:mga0a205_28139_c1 3300050515 Bacteria 5372
273 Ga0495601_0013271 3300053077 Bacteria 4953
274 Ga0500555_000038 3300053103 Bacteria 70808

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_101946_c1 nmdc:mga05p37_101946_c1_156_1568 456
2 3300031240 Ga0265320_10000706 Ga0265320_100007062 460
3 3300038443 Ga0395901_0308704 Ga0395901_0308704_165_1556 462
4 3300013306 Ga0163162_10121437 Ga0163162_101214373 463
5 3300009093 Ga0105240_10234889 Ga0105240_102348892 470
6 3300013307 Ga0157372_10000564 Ga0157372_100005647 470
7 3300025912 Ga0207707_10000461 Ga0207707_100004616 470
8 3300025906 Ga0207699_10001711 Ga0207699_100017117 473
9 3300050507 nmdc:mga05p37_283561_c1 nmdc:mga05p37_283561_c1_501_1928 473
10 3300028573 Ga0265334_10015543 Ga0265334_100155432 476
11 3300028653 Ga0265323_10005380 Ga0265323_100053804 476
12 3300031240 Ga0265320_10025633 Ga0265320_100256332 476
13 3300031247 Ga0265340_10004205 Ga0265340_100042052 476
14 3300031249 Ga0265339_10052057 Ga0265339_100520572 476
15 3300031595 Ga0265313_10008931 Ga0265313_100089312 476
16 3300028563 Ga0265319_1003127 Ga0265319_10031277 477
17 3300028653 Ga0265323_10000168 Ga0265323_100001688 477
18 3300031712 Ga0265342_10015104 Ga0265342_100151045 477
19 3300053077 Ga0495601_0013271 Ga0495601_0013271_3502_4941 477
20 3300005327 Ga0070658_10049460 Ga0070658_100494602 479
21 3300025909 Ga0207705_10032225 Ga0207705_100322252 479
22 3300005563 Ga0068855_100107030 Ga0068855_1001070302 480
23 3300005616 Ga0068852_100069393 Ga0068852_1000693932 480
24 3300010375 Ga0105239_10105967 Ga0105239_101059671 480
25 3300025949 Ga0207667_10112106 Ga0207667_101121062 480
26 3300026142 Ga0207698_10037426 Ga0207698_100374262 480
27 3300028577 Ga0265318_10004343 Ga0265318_100043432 481
28 3300031240 Ga0265320_10002721 Ga0265320_100027217 481
29 3300005435 Ga0070714_100000715 Ga0070714_1000007157 483
30 3300005436 Ga0070713_100004775 Ga0070713_1000047753 483
31 3300025928 Ga0207700_10002775 Ga0207700_100027754 483
32 3300025929 Ga0207664_10007135 Ga0207664_100071357 483
33 3300045051 Ga0451576_0160403 Ga0451576_0160403_50_1555 483
34 3300009147 Ga0114129_10206823 Ga0114129_102068232 484
35 3300028653 Ga0265323_10016236 Ga0265323_100162362 484
36 3300028556 Ga0265337_1005175 Ga0265337_10051751 485
37 3300028654 Ga0265322_10019798 Ga0265322_100197981 485
38 3300028666 Ga0265336_10000660 Ga0265336_1000066012 485
39 3300028800 Ga0265338_10002096 Ga0265338_100020961 485
40 3300029957 Ga0265324_10000900 Ga0265324_100009007 485
41 3300031240 Ga0265320_10023723 Ga0265320_100237232 485
42 3300031251 Ga0265327_10001486 Ga0265327_100014869 485
43 3300031711 Ga0265314_10006880 Ga0265314_100068808 485
44 3300028800 Ga0265338_10000468 Ga0265338_1000046859 486
45 3300031239 Ga0265328_10015246 Ga0265328_100152462 486
46 3300050507 nmdc:mga05p37_271292_c1 nmdc:mga05p37_271292_c1_39_1586 487
47 3300050507 nmdc:mga05p37_455_c1 nmdc:mga05p37_455_c1_34922_36490 487
48 3300006173 Ga0070716_100000269 Ga0070716_10000026913 488
49 3300025939 Ga0207665_10000015 Ga0207665_1000001576 488
50 3300009094 Ga0111539_10025510 Ga0111539_100255103 489
51 3300031711 Ga0265314_10009353 Ga0265314_100093535 489
52 3300050511 nmdc:mga08y16_2372_c1 nmdc:mga08y16_2372_c1_14498_15997 489
53 3300005467 Ga0070706_100070733 Ga0070706_1000707333 491
54 3300005468 Ga0070707_100032030 Ga0070707_1000320303 491
55 3300005546 Ga0070696_100056241 Ga0070696_1000562412 491
56 3300009147 Ga0114129_10069250 Ga0114129_100692503 491
57 3300009147 Ga0114129_10371967 Ga0114129_103719672 491
58 3300025922 Ga0207646_10046256 Ga0207646_100462562 491
59 3300050507 nmdc:mga05p37_102424_c1 nmdc:mga05p37_102424_c1_603_2117 491
60 3300005535 Ga0070684_100060154 Ga0070684_1000601542 492
61 3300009093 Ga0105240_10001614 Ga0105240_1000161431 492
62 3300009551 Ga0105238_10015960 Ga0105238_100159607 492
63 3300025913 Ga0207695_10008802 Ga0207695_100088024 492
64 3300025924 Ga0207694_10202689 Ga0207694_102026891 492
65 3300005288 Ga0065714_10064432 Ga0065714_1006443292 493
66 3300005290 Ga0065712_10067730 Ga0065712_1006773092 493
67 3300005293 Ga0065715_10001351 Ga0065715_100013514 493
68 3300009093 Ga0105240_10000782 Ga0105240_1000078255 493
69 3300009545 Ga0105237_10009592 Ga0105237_1000959210 493
70 3300025913 Ga0207695_10002783 Ga0207695_1000278321 493
71 3300025914 Ga0207671_10019355 Ga0207671_100193552 493
72 3300031344 Ga0265316_10028290 Ga0265316_100282904 493
73 3300031595 Ga0265313_10014793 Ga0265313_100147932 493
74 3300006175 Ga0070712_100087610 Ga0070712_1000876102 494
75 3300025915 Ga0207693_10082364 Ga0207693_100823643 494
76 3300005467 Ga0070706_100000424 Ga0070706_10000042431 495
77 3300005468 Ga0070707_100005086 Ga0070707_1000050866 495
78 3300005536 Ga0070697_100022243 Ga0070697_1000222432 495
79 3300006028 Ga0070717_10046845 Ga0070717_100468452 495
80 3300025910 Ga0207684_10000004 Ga0207684_10000004299 495
81 3300025922 Ga0207646_10042392 Ga0207646_100423924 495
82 3300050512 nmdc:mga0n895_216983_c1 nmdc:mga0n895_216983_c1_365_1879 495
83 3300005434 Ga0070709_10002516 Ga0070709_100025163 496
84 3300005436 Ga0070713_100024129 Ga0070713_1000241293 496
85 3300005440 Ga0070705_100003094 Ga0070705_1000030945 496
86 3300005445 Ga0070708_100000380 Ga0070708_10000038019 496
87 3300005445 Ga0070708_100068321 Ga0070708_1000683213 496
88 3300005467 Ga0070706_100020471 Ga0070706_1000204716 496
89 3300005530 Ga0070679_100015611 Ga0070679_1000156112 496
90 3300005536 Ga0070697_100009654 Ga0070697_1000096543 496
91 3300005546 Ga0070696_100002419 Ga0070696_1000024197 496
92 3300005547 Ga0070693_100000012 Ga0070693_10000001268 496
93 3300005549 Ga0070704_100000650 Ga0070704_1000006509 496
94 3300005842 Ga0068858_100019901 Ga0068858_1000199011 496
95 3300009177 Ga0105248_10090575 Ga0105248_100905753 496
96 3300025885 Ga0207653_10023798 Ga0207653_100237981 496
97 3300025914 Ga0207671_10103489 Ga0207671_101034891 496
98 3300025917 Ga0207660_10019162 Ga0207660_100191623 496
99 3300025928 Ga0207700_10055109 Ga0207700_100551091 496
100 3300026035 Ga0207703_10018415 Ga0207703_100184151 496
101 3300037853 Ga0436364_0175627 Ga0436364_0175627_7414_8928 496
102 3300050514 nmdc:mga08x19_21093_c1 nmdc:mga08x19_21093_c1_901_2403 496
103 3300005435 Ga0070714_100171827 Ga0070714_1001718272 497
104 3300005467 Ga0070706_100051797 Ga0070706_1000517973 497
105 3300006028 Ga0070717_10033516 Ga0070717_100335163 497
106 3300006914 Ga0075436_100005151 Ga0075436_1000051514 497
107 3300009093 Ga0105240_10037379 Ga0105240_100373791 497
108 3300025910 Ga0207684_10053923 Ga0207684_100539231 497
109 3300025929 Ga0207664_10138800 Ga0207664_101388001 497
110 3300053103 Ga0500555_000038 Ga0500555_000038_3597_5303 497
111 3300006163 Ga0070715_10000017 Ga0070715_1000001751 499
112 3300025905 Ga0207685_10000017 Ga0207685_1000001763 499
113 3300025922 Ga0207646_10020995 Ga0207646_100209952 499
114 3300005985 Ga0081539_10000481 Ga0081539_100004819 500
115 3300025921 Ga0207652_10102550 Ga0207652_101025501 500
116 3300026089 Ga0207648_10175445 Ga0207648_101754451 500
117 3300026118 Ga0207675_100005752 Ga0207675_1000057528 500
118 3300005578 Ga0068854_100131220 Ga0068854_1001312202 501
119 3300005334 Ga0068869_100012097 Ga0068869_1000120976 502
120 3300025942 Ga0207689_10034257 Ga0207689_100342571 502
121 3300025961 Ga0207712_10005951 Ga0207712_100059515 502
122 3300027907 Ga0207428_10019914 Ga0207428_100199144 502
123 3300050515 nmdc:mga0a205_237494_c1 nmdc:mga0a205_237494_c1_132_1646 502
124 3300005458 Ga0070681_10002436 Ga0070681_100024363 503
125 3300005539 Ga0068853_100100910 Ga0068853_1001009102 503
126 3300005843 Ga0068860_100010447 Ga0068860_1000104472 503
127 3300009148 Ga0105243_10020269 Ga0105243_100202695 503
128 3300028381 Ga0268264_10139055 Ga0268264_101390552 503
129 3300005468 Ga0070707_100175800 Ga0070707_1001758002 505
130 3300014326 Ga0157380_10061482 Ga0157380_100614823 505
131 3300025972 Ga0207668_10126597 Ga0207668_101265972 505
132 3300005340 Ga0070689_100176508 Ga0070689_1001765081 506
133 3300005347 Ga0070668_100064053 Ga0070668_1000640531 506
134 3300005355 Ga0070671_100083414 Ga0070671_1000834141 506
135 3300005367 Ga0070667_100038043 Ga0070667_1000380432 506
136 3300009101 Ga0105247_10052638 Ga0105247_100526381 506
137 3300013296 Ga0157374_10210282 Ga0157374_102102821 506
138 3300013297 Ga0157378_10116181 Ga0157378_101161812 506
139 3300025899 Ga0207642_10011255 Ga0207642_100112552 506
140 3300025941 Ga0207711_10067064 Ga0207711_100670643 506
141 3300026088 Ga0207641_10035465 Ga0207641_100354652 506
142 3300005336 Ga0070680_100006352 Ga0070680_1000063523 507
143 3300005343 Ga0070687_100002222 Ga0070687_1000022222 507
144 3300005441 Ga0070700_100050194 Ga0070700_1000501941 507
145 3300005445 Ga0070708_100108187 Ga0070708_1001081872 507
146 3300005458 Ga0070681_10010968 Ga0070681_100109683 507
147 3300005468 Ga0070707_100094255 Ga0070707_1000942552 507
148 3300005530 Ga0070679_100010056 Ga0070679_1000100568 507
149 3300005539 Ga0068853_100006121 Ga0068853_10000612110 507
150 3300005544 Ga0070686_100005066 Ga0070686_1000050667 507
151 3300005549 Ga0070704_100138576 Ga0070704_1001385761 507
152 3300005564 Ga0070664_100074208 Ga0070664_1000742081 507
153 3300005577 Ga0068857_100114392 Ga0068857_1001143922 507
154 3300005614 Ga0068856_100024947 Ga0068856_1000249472 507
155 3300005843 Ga0068860_100034455 Ga0068860_1000344551 507
156 3300009098 Ga0105245_10075720 Ga0105245_100757202 507
157 3300009101 Ga0105247_10010969 Ga0105247_100109693 507
158 3300009176 Ga0105242_10076648 Ga0105242_100766481 507
159 3300013100 Ga0157373_10044456 Ga0157373_100444563 507
160 3300013105 Ga0157369_10075313 Ga0157369_100753133 507
161 3300013297 Ga0157378_10012825 Ga0157378_100128253 507
162 3300013306 Ga0163162_10013332 Ga0163162_100133327 507
163 3300013306 Ga0163162_10094618 Ga0163162_100946183 507
164 3300025900 Ga0207710_10002057 Ga0207710_100020573 507
165 3300025912 Ga0207707_10001201 Ga0207707_100012013 507
166 3300025917 Ga0207660_10004538 Ga0207660_100045382 507
167 3300025918 Ga0207662_10001431 Ga0207662_1000143110 507
168 3300025921 Ga0207652_10007097 Ga0207652_100070972 507
169 3300026041 Ga0207639_10055428 Ga0207639_100554282 507
170 3300026116 Ga0207674_10010772 Ga0207674_100107724 507
171 3300028381 Ga0268264_10015454 Ga0268264_100154542 507
172 3300028381 Ga0268264_10050380 Ga0268264_100503802 507
173 3300037471 Ga0395905_0036075 Ga0395905_0036075_1435_3003 507
174 3300048907 Ga0496104_0234886 Ga0496104_0234886_63_1610 507
175 3300048915 Ga0496112_0249152 Ga0496112_0249152_15_1562 507
176 3300005290 Ga0065712_10116895 Ga0065712_101168951 508
177 3300005335 Ga0070666_10043392 Ga0070666_100433922 508
178 3300005338 Ga0068868_100009818 Ga0068868_1000098183 508
179 3300005364 Ga0070673_100109979 Ga0070673_1001099791 508
180 3300005438 Ga0070701_10027998 Ga0070701_100279982 508
181 3300005440 Ga0070705_100012624 Ga0070705_1000126242 508
182 3300005441 Ga0070700_100088550 Ga0070700_1000885501 508
183 3300005471 Ga0070698_100073246 Ga0070698_1000732462 508
184 3300005530 Ga0070679_100047289 Ga0070679_1000472893 508
185 3300005536 Ga0070697_100005979 Ga0070697_1000059794 508
186 3300005546 Ga0070696_100142515 Ga0070696_1001425151 508
187 3300005548 Ga0070665_100238606 Ga0070665_1002386061 508
188 3300005577 Ga0068857_100038492 Ga0068857_1000384922 508
189 3300005841 Ga0068863_100104508 Ga0068863_1001045082 508
190 3300005842 Ga0068858_100018062 Ga0068858_1000180623 508
191 3300005843 Ga0068860_100025707 Ga0068860_1000257072 508
192 3300005843 Ga0068860_100074999 Ga0068860_1000749993 508
193 3300006358 Ga0068871_100008148 Ga0068871_1000081485 508
194 3300006358 Ga0068871_100011884 Ga0068871_1000118842 508
195 3300009094 Ga0111539_10097259 Ga0111539_100972593 508
196 3300009177 Ga0105248_10033384 Ga0105248_100333844 508
197 3300009553 Ga0105249_10032443 Ga0105249_100324431 508
198 3300013296 Ga0157374_10027590 Ga0157374_100275903 508
199 3300013306 Ga0163162_10047477 Ga0163162_100474773 508
200 3300013308 Ga0157375_10031675 Ga0157375_100316753 508
201 3300013308 Ga0157375_10244409 Ga0157375_102444091 508
202 3300013308 Ga0157375_10325785 Ga0157375_103257851 508
203 3300014325 Ga0163163_10006193 Ga0163163_100061933 508
204 3300014325 Ga0163163_10086962 Ga0163163_100869623 508
205 3300014326 Ga0157380_10005589 Ga0157380_100055894 508
206 3300025904 Ga0207647_10000445 Ga0207647_1000044529 508
207 3300025924 Ga0207694_10030115 Ga0207694_100301152 508
208 3300025941 Ga0207711_10045502 Ga0207711_100455022 508
209 3300026023 Ga0207677_10013444 Ga0207677_100134442 508
210 3300026075 Ga0207708_10001618 Ga0207708_1000161811 508
211 3300026075 Ga0207708_10007554 Ga0207708_100075543 508
212 3300026088 Ga0207641_10098574 Ga0207641_100985741 508
213 3300026116 Ga0207674_10017934 Ga0207674_100179346 508
214 3300027671 Ga0209588_1024122 Ga0209588_10241221 508
215 3300028381 Ga0268264_10010138 Ga0268264_100101383 508
216 3300028381 Ga0268264_10029098 Ga0268264_100290982 508
217 3300005468 Ga0070707_100000375 Ga0070707_10000037513 509
218 3300005536 Ga0070697_100000048 Ga0070697_10000004849 509
219 3300005546 Ga0070696_100039837 Ga0070696_1000398372 509
220 3300006173 Ga0070716_100000005 Ga0070716_10000000565 509
221 3300006871 Ga0075434_100195318 Ga0075434_1001953182 509
222 3300014325 Ga0163163_10093525 Ga0163163_100935252 509
223 3300025922 Ga0207646_10000675 Ga0207646_1000067511 509
224 3300025939 Ga0207665_10000012 Ga0207665_1000001265 509
225 3300025942 Ga0207689_10043466 Ga0207689_100434662 509
226 3300050512 nmdc:mga0n895_276481_c1 nmdc:mga0n895_276481_c1_35_1576 509
227 3300050515 nmdc:mga0a205_28139_c1 nmdc:mga0a205_28139_c1_88_1629 509
228 3300005445 Ga0070708_100007009 Ga0070708_1000070099 510
229 3300005467 Ga0070706_100009691 Ga0070706_1000096912 510
230 3300005468 Ga0070707_100051281 Ga0070707_1000512813 510
231 3300005471 Ga0070698_100005095 Ga0070698_10000509511 510
232 3300005518 Ga0070699_100003088 Ga0070699_10000308814 510
233 3300005536 Ga0070697_100031119 Ga0070697_1000311193 510
234 3300005617 Ga0068859_100203180 Ga0068859_1002031802 510
235 3300006931 Ga0097620_100203167 Ga0097620_1002031672 510
236 3300013307 Ga0157372_10035777 Ga0157372_100357772 510
237 3300025910 Ga0207684_10050298 Ga0207684_100502981 510
238 3300005444 Ga0070694_100001166 Ga0070694_1000011665 511
239 3300005536 Ga0070697_100045141 Ga0070697_1000451411 511
240 3300007076 Ga0075435_100000325 Ga0075435_10000032513 511
241 3300009147 Ga0114129_10027953 Ga0114129_100279532 511
242 3300050507 nmdc:mga05p37_113121_c1 nmdc:mga05p37_113121_c1_1518_3056 511
243 3300050513 nmdc:mga0rr50_1414_c1 nmdc:mga0rr50_1414_c1_7224_8762 511
244 3300050514 nmdc:mga08x19_16_c1 nmdc:mga08x19_16_c1_279117_280655 511
245 3300005364 Ga0070673_100059026 Ga0070673_1000590261 512
246 3300005617 Ga0068859_100158235 Ga0068859_1001582352 512
247 3300006880 Ga0075429_100096736 Ga0075429_1000967361 512
248 3300006931 Ga0097620_100158240 Ga0097620_1001582402 512
249 3300009148 Ga0105243_10000187 Ga0105243_1000018725 512
250 3300009176 Ga0105242_10000008 Ga0105242_1000000873 512
251 3300013308 Ga0157375_10324843 Ga0157375_103248431 512
252 3300025931 Ga0207644_10006893 Ga0207644_100068938 512
253 3300025934 Ga0207686_10000023 Ga0207686_1000002373 512
254 3300025935 Ga0207709_10000062 Ga0207709_1000006288 512
255 3300025961 Ga0207712_10100586 Ga0207712_101005862 512
256 3300027907 Ga0207428_10004541 Ga0207428_100045412 512
257 3300050507 nmdc:mga05p37_254608_c1 nmdc:mga05p37_254608_c1_484_2064 512
258 3300050508 nmdc:mga09592_132074_c1 nmdc:mga09592_132074_c1_200_1780 512
259 3300050511 nmdc:mga08y16_71928_c1 nmdc:mga08y16_71928_c1_1647_3227 512
260 3300013306 Ga0163162_10011802 Ga0163162_100118026 513
261 3300002074 JGI24748J21848_1000027 JGI24748J21848_10000275 515
262 3300002239 JGI24034J26672_10000009 JGI24034J26672_1000000970 515
263 3300002239 JGI24034J26672_10000029 JGI24034J26672_100000295 515
264 3300005842 Ga0068858_100000085 Ga0068858_10000008574 515
265 3300005842 Ga0068858_100097811 Ga0068858_1000978112 515
266 3300009101 Ga0105247_10000039 Ga0105247_1000003973 515
267 3300009176 Ga0105242_10000204 Ga0105242_100002046 515
268 3300025900 Ga0207710_10000001 Ga0207710_10000001476 515
269 3300025934 Ga0207686_10000253 Ga0207686_1000025321 515
270 3300025934 Ga0207686_10039562 Ga0207686_100395622 515
271 3300026035 Ga0207703_10000024 Ga0207703_10000024184 515
272 3300026035 Ga0207703_10136109 Ga0207703_101361092 515
273 3300026088 Ga0207641_10104314 Ga0207641_101043142 515
274 3300048909 Ga0496106_0005208 Ga0496106_0005208_396_1946 515

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16499

Melibiase_2

Alpha galactosidase A

199

464

0.9

PF17801

Melibiase_C

Alpha galactosidase C-terminal beta sandwich domain

476

551

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1uas-assembly1.cif.gz_A crystal structure of rice alpha-galactosidase 0.9518 154 514
1uas-assembly1.cif.gz_A crystal structure of rice alpha-galactosidase 0.9441 154 514
3a5v-assembly1.cif.gz_A crystal structure of alpha-galactosidase i from mortierella vinacea 0.9435 154 513
6f4c-assembly1.cif.gz_B nicotiana benthamiana alpha-galactosidase 0.9425 156 514
3igu-assembly1.cif.gz_B crystal structure of human alpha-n-acetylgalactosaminidase, covalent intermediate 0.9389 154 514
ID Description Score Start End Superfamily
af_A0A0R0FT50_59_332_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9476 156 428 3.20.20.70
af_A0A1D6EFC8_141_250_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9466 174 278 3.20.20.70
af_A0A1D6KS92_108_259_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9442 272 428 3.20.20.70
af_A0A0P0XVP1_39_282_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9396 156 393 3.20.20.70
af_A0A1D6KS92_108_259_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9382 272 428 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A522Q6R7-F1-model_v4 Alpha-galactosidase (EC 3.2.1.22) (Melibiase) 0.9841 164 514 GO:0004557
GO:0005576
GO:0005975
AF-A0A2V8XW92-F1-model_v4 Alpha-galactosidase (EC 3.2.1.22) (Melibiase) 0.9822 155 515 GO:0004557
GO:0005576
GO:0005975
AF-A0A678QGP7-F1-model_v4 Alpha-galactosidase (EC 3.2.1.22) (Melibiase) 0.9822 299 426 GO:0004557
GO:0005975
GO:0009505
AF-A0A7C5Z0Q5-F1-model_v4 Alpha-galactosidase (EC 3.2.1.22) (Melibiase) 0.9819 164 514 GO:0004557
GO:0005576
GO:0005975
AF-A0A522Q6R7-F1-model_v4 Alpha-galactosidase (EC 3.2.1.22) (Melibiase) 0.9813 164 514 GO:0004557
GO:0005576
GO:0005975

Feature Viewer

pLDDT pTM Quality
90.18 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map