F379563

General Info

Members Datasets Scaffolds Average Seq Length
274 146 548 686

Family's Representative Sequence

Representative Sequence 3300005456|Ga0070678_100005539|Ga0070678_1000055393
Length 729
Sequence VTRLCSFLITWFHEIAELLDPAARIAELRRQIRYHEERYYIANQPEISDAEFDELMKELQRLEADHPDLVSVDSPTQRVSGRVAEGFREVAHAEPMLSLDNAYDEDELRAFDDRVRRGLSETGSVPAVVDYIAELKIDGVSIALTYVDGVFVRGATRGNGLRGEDVTSNVRTIRAIPLQLNESVPGRIEIRGEVYLPRAAFEKMNEERANAGDVLFANPRNAAAGALRNLDPSLVSRRGLRAFTYQLVAGGSNQGDLGGSKDPLLRTAVETGLQTRLVSHASTLEQLGRWGLPVEPHWRRCAGIDALIEFCREWGDKRRSLGFDTDGVVIKLDAIDKRRRLGTTSKFPRWAVAFKFPAEQKTTLLKQIDVNVGRTGAVTPFAVLDPVFVGGTTVSMATLHNADDIARKDIRERDWVIVEKAGDVIPRVVGPVLTRRPEDSVPWVMPSTCPRCGSQLHREEEEAVWRCENVSCPSKLQRGLEHFASRGAMNIEGLGESLVEQLIASGLVRDYADVYHLTADQLAALTSTSEREGKAIERRFGAKNAAKVIEQIDRSRANEFWRVIYALGIRHIGERGAQVLARAFGSIESLESASLEALQATGEIGPVLAASARSWLDEPRNRELVARLRAAGVRLEVPESERLHAAGPGPLTGKTYVITGTLASMTREEATTALERRGAKVTGSVSKKTTAVIVGEEAGSKADKARTLGVTMLDEATFRELLQQYPEPA

Samples

Sample ID Description Type Environment
1 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
102 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
113 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
143 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
144 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
146 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0
Isolates 0.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.73
Rhizosphere 98.91
Stem 0
Stem Tuber 0
Unclassified 1.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070678_100005539 3300005456 Bacteria 7318
2 JGI25406J46586_10001877 3300003203 Bacteria 9875
3 JGI25406J46586_10009540 3300003203 Bacteria 4346
4 rootH2_10036442 3300003320 Bacteria 23211
5 Ga0065704_10002464 3300005289 Bacteria 7282
6 Ga0065712_10000852 3300005290 Bacteria 12329
7 Ga0065707_10001752 3300005295 Bacteria 8128
8 Ga0065707_10002154 3300005295 Bacteria 6663
9 Ga0065707_10086512 3300005295 Bacteria 5424
10 Ga0065707_10095141 3300005295 Bacteria 3413
11 Ga0070676_10020867 3300005328 Bacteria 3663
12 Ga0070670_100009520 3300005331 Bacteria 8293
13 Ga0070670_100039701 3300005331 Bacteria 4047
14 Ga0068869_100024598 3300005334 Bacteria 4171
15 Ga0068869_100030872 3300005334 Unclassified 3766
16 Ga0068868_100006369 3300005338 Bacteria 8348
17 Ga0070669_100003685 3300005353 Bacteria 11054
18 Ga0070675_100000290 3300005354 Bacteria 33444
19 Ga0070675_100002392 3300005354 Bacteria 13982
20 Ga0070675_100013123 3300005354 Bacteria 6510
21 Ga0070675_100048966 3300005354 Bacteria 3467
22 Ga0070675_100114515 3300005354 Bacteria 2285
23 Ga0070671_100010759 3300005355 Bacteria 7343
24 Ga0070674_100029629 3300005356 Bacteria 3609
25 Ga0070674_100062068 3300005356 Bacteria 2610
26 Ga0070673_100023852 3300005364 Bacteria 4475
27 Ga0070673_100040663 3300005364 Bacteria 3569
28 Ga0070688_100009483 3300005365 Bacteria 5325
29 Ga0070667_100010291 3300005367 Bacteria 7727
30 Ga0070714_100027751 3300005435 Bacteria 4690
31 Ga0070701_10002099 3300005438 Bacteria 7580
32 Ga0070701_10005595 3300005438 Bacteria 5206
33 Ga0070701_10022139 3300005438 Bacteria 3044
34 Ga0070705_100000276 3300005440 Bacteria 30782
35 Ga0070694_100000450 3300005444 Bacteria 22473
36 Ga0070694_100004247 3300005444 Bacteria 8619
37 Ga0070694_100026567 3300005444 Bacteria 3753
38 Ga0068867_100006621 3300005459 Bacteria 8190
39 Ga0068867_100006827 3300005459 Bacteria 8070
40 Ga0070707_100031532 3300005468 Bacteria 5050
41 Ga0070698_100002413 3300005471 Bacteria 20585
42 Ga0070698_100014153 3300005471 Bacteria 8433
43 Ga0070698_100019974 3300005471 Bacteria 7025
44 Ga0070698_100043410 3300005471 Bacteria 4609
45 Ga0070699_100003690 3300005518 Bacteria 13541
46 Ga0070699_100006152 3300005518 Bacteria 10485
47 Ga0070699_100017001 3300005518 Bacteria 6245
48 Ga0070699_100028487 3300005518 Bacteria 4817
49 Ga0070672_100015986 3300005543 Bacteria 5362
50 Ga0070686_100002817 3300005544 Bacteria 9581
51 Ga0070695_100000101 3300005545 Bacteria 37427
52 Ga0070696_100000624 3300005546 Bacteria 22581
53 Ga0070696_100003694 3300005546 Bacteria 10206
54 Ga0070696_100069189 3300005546 Bacteria 2480
55 Ga0070665_100000143 3300005548 Bacteria 133054
56 Ga0070704_100002350 3300005549 Bacteria 10612
57 Ga0070704_100027624 3300005549 Bacteria 3767
58 Ga0070664_100000547 3300005564 Bacteria 28718
59 Ga0070664_100041370 3300005564 Bacteria 3889
60 Ga0068857_100038201 3300005577 Bacteria 4252
61 Ga0068857_100085811 3300005577 Bacteria 2814
62 Ga0068859_100012503 3300005617 Bacteria 8540
63 Ga0068859_100020656 3300005617 Bacteria 6608
64 Ga0068859_100073448 3300005617 Bacteria 3459
65 Ga0068859_100078073 3300005617 Bacteria 3351
66 Ga0068859_100094095 3300005617 Bacteria 3048
67 Ga0068861_100002342 3300005719 Bacteria 12317
68 Ga0068861_100002583 3300005719 Bacteria 11850
69 Ga0068851_10022165 3300005834 Bacteria 3091
70 Ga0068870_10000597 3300005840 Bacteria 13737
71 Ga0068870_10001825 3300005840 Bacteria 8742
72 Ga0068870_10035144 3300005840 Bacteria 2570
73 Ga0068863_100007612 3300005841 Bacteria 10591
74 Ga0068863_100011119 3300005841 Bacteria 8726
75 Ga0068858_100008994 3300005842 Bacteria 9553
76 Ga0068858_100016446 3300005842 Bacteria 6946
77 Ga0068858_100018850 3300005842 Bacteria 6457
78 Ga0068860_100026903 3300005843 Bacteria 5543
79 Ga0068860_100055144 3300005843 Bacteria 3778
80 Ga0068862_100003355 3300005844 Bacteria 13820
81 Ga0068862_100004245 3300005844 Bacteria 12135
82 Ga0068862_100086175 3300005844 Bacteria 2730
83 Ga0081539_10000019 3300005985 Bacteria 369381
84 Ga0081539_10000056 3300005985 Bacteria 256522
85 Ga0068871_100032325 3300006358 Bacteria 4133
86 Ga0075428_100000582 3300006844 Bacteria 37313
87 Ga0075428_100008588 3300006844 Bacteria 11329
88 Ga0075428_100011052 3300006844 Bacteria 10041
89 Ga0075428_100143180 3300006844 Bacteria 2599
90 Ga0075430_100001829 3300006846 Bacteria 17413
91 Ga0075430_100013780 3300006846 Bacteria 6888
92 Ga0075430_100015143 3300006846 Bacteria 6565
93 Ga0075431_100001957 3300006847 Bacteria 19653
94 Ga0075431_100009334 3300006847 Bacteria 9845
95 Ga0075431_100018061 3300006847 Bacteria 7174
96 Ga0075431_100026019 3300006847 Bacteria 5999
97 Ga0075431_100092077 3300006847 Bacteria 3129
98 Ga0075433_10002638 3300006852 Bacteria 13692
99 Ga0075433_10007906 3300006852 Bacteria 8457
100 Ga0075433_10016119 3300006852 Bacteria 6148
101 Ga0075434_100005021 3300006871 Bacteria 12009
102 Ga0075434_100008135 3300006871 Bacteria 9725
103 Ga0075434_100025406 3300006871 Bacteria 5795
104 Ga0075429_100003094 3300006880 Bacteria 14118
105 Ga0075429_100027930 3300006880 Bacteria 4898
106 Ga0075429_100042060 3300006880 Bacteria 3978
107 Ga0068865_100023786 3300006881 Bacteria 4015
108 Ga0097620_100012503 3300006931 Bacteria 8540
109 Ga0097620_100020656 3300006931 Bacteria 6608
110 Ga0097620_100073448 3300006931 Bacteria 3459
111 Ga0097620_100078073 3300006931 Bacteria 3351
112 Ga0097620_100094094 3300006931 Bacteria 3048
113 Ga0075435_100006375 3300007076 Bacteria 8339
114 Ga0075435_100038418 3300007076 Bacteria 3816
115 Ga0075435_100067201 3300007076 Bacteria 2918
116 Ga0105240_10015836 3300009093 Bacteria 10230
117 Ga0105240_10024110 3300009093 Bacteria 8031
118 Ga0111539_10026802 3300009094 Bacteria 7041
119 Ga0111539_10054768 3300009094 Bacteria 4744
120 Ga0111539_10103685 3300009094 Bacteria 3338
121 Ga0111539_10127438 3300009094 Bacteria 2982
122 Ga0111539_10209843 3300009094 Unclassified 2269
123 Ga0114129_10002568 3300009147 Bacteria 25225
124 Ga0114129_10010485 3300009147 Bacteria 13217
125 Ga0114129_10012065 3300009147 Bacteria 12295
126 Ga0114129_10032280 3300009147 Bacteria 7400
127 Ga0114129_10036070 3300009147 Bacteria 6984
128 Ga0114129_10045886 3300009147 Bacteria 6142
129 Ga0114129_10072257 3300009147 Bacteria 4810
130 Ga0114129_10081107 3300009147 Bacteria 4510
131 Ga0114129_10141299 3300009147 Bacteria 3300
132 Ga0105248_10011482 3300009177 Bacteria 9760
133 Ga0105248_10119294 3300009177 Bacteria 2975
134 Ga0105238_10021318 3300009551 Bacteria 6604
135 Ga0105249_10001413 3300009553 Bacteria 20997
136 Ga0105249_10023917 3300009553 Bacteria 5487
137 Ga0105249_10024237 3300009553 Bacteria 5453
138 Ga0163162_10046352 3300013306 Bacteria 4356
139 Ga0157375_10001401 3300013308 Bacteria 20796
140 Ga0163163_10011009 3300014325 Bacteria 8178
141 Ga0157380_10011775 3300014326 Bacteria 6325
142 Ga0157380_10033238 3300014326 Bacteria 3972
143 Ga0157380_10045875 3300014326 Bacteria 3432
144 Ga0157380_10060260 3300014326 Bacteria 3032
145 Ga0157377_10011140 3300014745 Bacteria 4478
146 Ga0157376_10007811 3300014969 Bacteria 7667
147 Ga0213872_10003104 3300021361 Bacteria 9355
148 Ga0207688_10006099 3300025901 Bacteria 6555
149 Ga0207688_10040585 3300025901 Bacteria 2587
150 Ga0207680_10025717 3300025903 Bacteria 3250
151 Ga0207645_10000265 3300025907 Bacteria 43245
152 Ga0207645_10007689 3300025907 Bacteria 7591
153 Ga0207643_10004526 3300025908 Bacteria 7478
154 Ga0207643_10006748 3300025908 Bacteria 6157
155 Ga0207695_10036046 3300025913 Bacteria 5352
156 Ga0207662_10008776 3300025918 Bacteria 5544
157 Ga0207646_10049139 3300025922 Bacteria 3778
158 Ga0207681_10036404 3300025923 Bacteria 3246
159 Ga0207694_10029983 3300025924 Bacteria 4154
160 Ga0207650_10027620 3300025925 Bacteria 4064
161 Ga0207650_10043014 3300025925 Bacteria 3314
162 Ga0207659_10000723 3300025926 Bacteria 19547
163 Ga0207659_10012889 3300025926 Bacteria 5339
164 Ga0207659_10013741 3300025926 Bacteria 5199
165 Ga0207659_10016193 3300025926 Bacteria 4848
166 Ga0207700_10007774 3300025928 Bacteria 6587
167 Ga0207644_10008334 3300025931 Bacteria 6793
168 Ga0207644_10012041 3300025931 Bacteria 5735
169 Ga0207706_10008690 3300025933 Bacteria 9356
170 Ga0207706_10045601 3300025933 Bacteria 3883
171 Ga0207709_10008147 3300025935 Bacteria 5803
172 Ga0207670_10005433 3300025936 Bacteria 6990
173 Ga0207669_10006386 3300025937 Bacteria 5382
174 Ga0207691_10002350 3300025940 Bacteria 18516
175 Ga0207691_10003179 3300025940 Bacteria 16052
176 Ga0207691_10016751 3300025940 Bacteria 6956
177 Ga0207691_10093454 3300025940 Bacteria 2693
178 Ga0207691_10121786 3300025940 Bacteria 2311
179 Ga0207689_10000555 3300025942 Bacteria 35656
180 Ga0207689_10013461 3300025942 Bacteria 6985
181 Ga0207689_10017002 3300025942 Bacteria 6154
182 Ga0207679_10016156 3300025945 Bacteria 4950
183 Ga0207651_10012019 3300025960 Bacteria 4876
184 Ga0207651_10025128 3300025960 Bacteria 3699
185 Ga0207712_10009363 3300025961 Bacteria 6196
186 Ga0207668_10031886 3300025972 Bacteria 3476
187 Ga0207703_10015454 3300026035 Bacteria 5951
188 Ga0207703_10025952 3300026035 Bacteria 4610
189 Ga0207708_10018613 3300026075 Bacteria 5231
190 Ga0207708_10067841 3300026075 Bacteria 2729
191 Ga0207641_10002310 3300026088 Bacteria 17701
192 Ga0207641_10018302 3300026088 Bacteria 5742
193 Ga0207641_10075092 3300026088 Bacteria 2918
194 Ga0207648_10000447 3300026089 Bacteria 45676
195 Ga0207648_10003086 3300026089 Bacteria 17592
196 Ga0207648_10025238 3300026089 Bacteria 5295
197 Ga0207676_10010045 3300026095 Bacteria 6734
198 Ga0207674_10024459 3300026116 Bacteria 6454
199 Ga0207675_100001626 3300026118 Bacteria 22521
200 Ga0207675_100014884 3300026118 Bacteria 7261
201 Ga0207675_100020953 3300026118 Bacteria 6095
202 Ga0207683_10011114 3300026121 Bacteria 7672
203 Ga0207683_10030032 3300026121 Bacteria 4707
204 Ga0207683_10053634 3300026121 Bacteria 3536
205 Ga0207428_10001013 3300027907 Bacteria 31161
206 Ga0207428_10007429 3300027907 Bacteria 9991
207 Ga0207428_10075784 3300027907 Bacteria 2636
208 Ga0268266_10000150 3300028379 Bacteria 132906
209 Ga0268265_10000792 3300028380 Bacteria 30109
210 Ga0268265_10014892 3300028380 Bacteria 5308
211 Ga0268265_10061696 3300028380 Bacteria 2878
212 Ga0268264_10007143 3300028381 Bacteria 9358
213 Ga0373932_0004410 3300035112 Bacteria 3331
214 Ga0373943_0001254 3300035170 Bacteria 11354
215 Ga0373924_0002066 3300035410 Bacteria 6703
216 Ga0373935_0019803 3300035692 Bacteria 4106
217 Ga0373933_0002591 3300035724 Bacteria 10130
218 Ga0373937_0000143 3300036401 Bacteria 68812
219 Ga0373937_0017572 3300036401 Bacteria 6375
220 Ga0436361_0111163 3300039447 Bacteria 35542
221 Ga0451576_0025661 3300045051 Bacteria 6348
222 Ga0451576_0107239 3300045051 Bacteria 2906
223 Ga0495592_0020708 3300046454 Bacteria 5004
224 Ga0495594_0017058 3300046499 Bacteria 3832
225 Ga0495608_0026434 3300046511 Bacteria 3957
226 Ga0495630_0026282 3300046517 Bacteria 4309
227 Ga0495621_0005124 3300046539 Bacteria 3744
228 Ga0495645_0021839 3300046543 Bacteria 4627
229 Ga0495659_0007475 3300046664 Bacteria 3469
230 Ga0495599_0021766 3300046678 Bacteria 4002
231 Ga0495669_0026323 3300046684 Bacteria 2542
232 Ga0495613_0011712 3300046689 Bacteria 6518
233 Ga0495670_0038290 3300046691 Bacteria 2391
234 Ga0495604_0013109 3300047317 Bacteria 6603
235 Ga0495674_0012448 3300047319 Bacteria 8015
236 Ga0495684_0009003 3300047471 Bacteria 7706
237 Ga0496109_0104807 3300048912 Unclassified 2626
238 Ga0501042_0008784 3300049578 Bacteria 6699
239 Ga0501072_0009460 3300049588 Bacteria 7411
240 Ga0501073_0050895 3300049589 Bacteria 2902
241 Ga0501074_0017787 3300049590 Bacteria 5165
242 Ga0501075_0027253 3300049591 Bacteria 4210
243 Ga0501076_0011770 3300049592 Bacteria 6532
244 Ga0501079_0028917 3300049741 Bacteria 4254
245 Ga0501081_0027523 3300049743 Bacteria 3834
246 nmdc:mga05p37_123228_c1 3300050507 Bacteria 3184
247 nmdc:mga05p37_12636_c1 3300050507 Bacteria 10085
248 nmdc:mga05p37_12738_c1 3300050507 Bacteria 10055
249 nmdc:mga05p37_40518_c1 3300050507 Bacteria 5720
250 nmdc:mga05p37_50703_c1 3300050507 Bacteria 5105
251 nmdc:mga09592_1556_c1 3300050508 Bacteria 18452
252 nmdc:mga09592_18045_c1 3300050508 Bacteria 5784
253 nmdc:mga0qj67_1528_c1 3300050509 Bacteria 16238
254 nmdc:mga06r32_121096_c1 3300050510 Bacteria 2581
255 nmdc:mga06r32_3139_c1 3300050510 Bacteria 14808
256 nmdc:mga06r32_69326_c1 3300050510 Bacteria 3408
257 nmdc:mga08y16_102486_c1 3300050511 Bacteria 2980
258 nmdc:mga08y16_134937_c1 3300050511 Bacteria 2565
259 nmdc:mga08y16_5450_c1 3300050511 Bacteria 13300
260 nmdc:mga08y16_6534_c1 3300050511 Bacteria 12225
261 nmdc:mga0n895_4008_c1 3300050512 Bacteria 11979
262 nmdc:mga0n895_5675_c1 3300050512 Bacteria 10459
263 nmdc:mga0rr50_19225_c1 3300050513 Bacteria 4605
264 nmdc:mga0rr50_4295_c1 3300050513 Bacteria 8344
265 nmdc:mga08x19_50109_c1 3300050514 Bacteria 2679
266 nmdc:mga0a205_12336_c1 3300050515 Bacteria 7905
267 nmdc:mga0a205_59446_c1 3300050515 Bacteria 3692
268 nmdc:mga0a205_725_c1 3300050515 Bacteria 26539
269 Ga0495601_0009843 3300053077 Bacteria 5658
270 Ga0495595_0025628 3300053084 Bacteria 2615
271 Ga0590071_000388 3300059421 Bacteria 12950
272 Ga0590075_000608 3300059424 Bacteria 9634
273 Ga0590077_000634 3300059426 Bacteria 9426
274 2787435814 2786546517 Bacteria 6614109
275 Ga0070678_100005539
276 JGI25406J46586_10001877
277 JGI25406J46586_10009540
278 rootH2_10036442
279 Ga0065704_10002464
280 Ga0065712_10000852
281 Ga0065707_10001752
282 Ga0065707_10002154
283 Ga0065707_10086512
284 Ga0065707_10095141
285 Ga0070676_10020867
286 Ga0070670_100009520
287 Ga0070670_100039701
288 Ga0068869_100024598
289 Ga0068869_100030872
290 Ga0068868_100006369
291 Ga0070669_100003685
292 Ga0070675_100000290
293 Ga0070675_100002392
294 Ga0070675_100013123
295 Ga0070675_100048966
296 Ga0070675_100114515
297 Ga0070671_100010759
298 Ga0070674_100029629
299 Ga0070674_100062068
300 Ga0070673_100023852
301 Ga0070673_100040663
302 Ga0070688_100009483
303 Ga0070667_100010291
304 Ga0070714_100027751
305 Ga0070701_10002099
306 Ga0070701_10005595
307 Ga0070701_10022139
308 Ga0070705_100000276
309 Ga0070694_100000450
310 Ga0070694_100004247
311 Ga0070694_100026567
312 Ga0068867_100006621
313 Ga0068867_100006827
314 Ga0070707_100031532
315 Ga0070698_100002413
316 Ga0070698_100014153
317 Ga0070698_100019974
318 Ga0070698_100043410
319 Ga0070699_100003690
320 Ga0070699_100006152
321 Ga0070699_100017001
322 Ga0070699_100028487
323 Ga0070672_100015986
324 Ga0070686_100002817
325 Ga0070695_100000101
326 Ga0070696_100000624
327 Ga0070696_100003694
328 Ga0070696_100069189
329 Ga0070665_100000143
330 Ga0070704_100002350
331 Ga0070704_100027624
332 Ga0070664_100000547
333 Ga0070664_100041370
334 Ga0068857_100038201
335 Ga0068857_100085811
336 Ga0068859_100012503
337 Ga0068859_100020656
338 Ga0068859_100073448
339 Ga0068859_100078073
340 Ga0068859_100094095
341 Ga0068861_100002342
342 Ga0068861_100002583
343 Ga0068851_10022165
344 Ga0068870_10000597
345 Ga0068870_10001825
346 Ga0068870_10035144
347 Ga0068863_100007612
348 Ga0068863_100011119
349 Ga0068858_100008994
350 Ga0068858_100016446
351 Ga0068858_100018850
352 Ga0068860_100026903
353 Ga0068860_100055144
354 Ga0068862_100003355
355 Ga0068862_100004245
356 Ga0068862_100086175
357 Ga0081539_10000019
358 Ga0081539_10000056
359 Ga0068871_100032325
360 Ga0075428_100000582
361 Ga0075428_100008588
362 Ga0075428_100011052
363 Ga0075428_100143180
364 Ga0075430_100001829
365 Ga0075430_100013780
366 Ga0075430_100015143
367 Ga0075431_100001957
368 Ga0075431_100009334
369 Ga0075431_100018061
370 Ga0075431_100026019
371 Ga0075431_100092077
372 Ga0075433_10002638
373 Ga0075433_10007906
374 Ga0075433_10016119
375 Ga0075434_100005021
376 Ga0075434_100008135
377 Ga0075434_100025406
378 Ga0075429_100003094
379 Ga0075429_100027930
380 Ga0075429_100042060
381 Ga0068865_100023786
382 Ga0097620_100012503
383 Ga0097620_100020656
384 Ga0097620_100073448
385 Ga0097620_100078073
386 Ga0097620_100094094
387 Ga0075435_100006375
388 Ga0075435_100038418
389 Ga0075435_100067201
390 Ga0105240_10015836
391 Ga0105240_10024110
392 Ga0111539_10026802
393 Ga0111539_10054768
394 Ga0111539_10103685
395 Ga0111539_10127438
396 Ga0111539_10209843
397 Ga0114129_10002568
398 Ga0114129_10010485
399 Ga0114129_10012065
400 Ga0114129_10032280
401 Ga0114129_10036070
402 Ga0114129_10045886
403 Ga0114129_10072257
404 Ga0114129_10081107
405 Ga0114129_10141299
406 Ga0105248_10011482
407 Ga0105248_10119294
408 Ga0105238_10021318
409 Ga0105249_10001413
410 Ga0105249_10023917
411 Ga0105249_10024237
412 Ga0163162_10046352
413 Ga0157375_10001401
414 Ga0163163_10011009
415 Ga0157380_10011775
416 Ga0157380_10033238
417 Ga0157380_10045875
418 Ga0157380_10060260
419 Ga0157377_10011140
420 Ga0157376_10007811
421 Ga0213872_10003104
422 Ga0207688_10006099
423 Ga0207688_10040585
424 Ga0207680_10025717
425 Ga0207645_10000265
426 Ga0207645_10007689
427 Ga0207643_10004526
428 Ga0207643_10006748
429 Ga0207695_10036046
430 Ga0207662_10008776
431 Ga0207646_10049139
432 Ga0207681_10036404
433 Ga0207694_10029983
434 Ga0207650_10027620
435 Ga0207650_10043014
436 Ga0207659_10000723
437 Ga0207659_10012889
438 Ga0207659_10013741
439 Ga0207659_10016193
440 Ga0207700_10007774
441 Ga0207644_10008334
442 Ga0207644_10012041
443 Ga0207706_10008690
444 Ga0207706_10045601
445 Ga0207709_10008147
446 Ga0207670_10005433
447 Ga0207669_10006386
448 Ga0207691_10002350
449 Ga0207691_10003179
450 Ga0207691_10016751
451 Ga0207691_10093454
452 Ga0207691_10121786
453 Ga0207689_10000555
454 Ga0207689_10013461
455 Ga0207689_10017002
456 Ga0207679_10016156
457 Ga0207651_10012019
458 Ga0207651_10025128
459 Ga0207712_10009363
460 Ga0207668_10031886
461 Ga0207703_10015454
462 Ga0207703_10025952
463 Ga0207708_10018613
464 Ga0207708_10067841
465 Ga0207641_10002310
466 Ga0207641_10018302
467 Ga0207641_10075092
468 Ga0207648_10000447
469 Ga0207648_10003086
470 Ga0207648_10025238
471 Ga0207676_10010045
472 Ga0207674_10024459
473 Ga0207675_100001626
474 Ga0207675_100014884
475 Ga0207675_100020953
476 Ga0207683_10011114
477 Ga0207683_10030032
478 Ga0207683_10053634
479 Ga0207428_10001013
480 Ga0207428_10007429
481 Ga0207428_10075784
482 Ga0268266_10000150
483 Ga0268265_10000792
484 Ga0268265_10014892
485 Ga0268265_10061696
486 Ga0268264_10007143
487 Ga0373932_0004410
488 Ga0373943_0001254
489 Ga0373924_0002066
490 Ga0373935_0019803
491 Ga0373933_0002591
492 Ga0373937_0000143
493 Ga0373937_0017572
494 Ga0436361_0111163
495 Ga0451576_0025661
496 Ga0451576_0107239
497 Ga0495592_0020708
498 Ga0495594_0017058
499 Ga0495608_0026434
500 Ga0495630_0026282
501 Ga0495621_0005124
502 Ga0495645_0021839
503 Ga0495659_0007475
504 Ga0495599_0021766
505 Ga0495669_0026323
506 Ga0495613_0011712
507 Ga0495670_0038290
508 Ga0495604_0013109
509 Ga0495674_0012448
510 Ga0495684_0009003
511 Ga0496109_0104807
512 Ga0501042_0008784
513 Ga0501072_0009460
514 Ga0501073_0050895
515 Ga0501074_0017787
516 Ga0501075_0027253
517 Ga0501076_0011770
518 Ga0501079_0028917
519 Ga0501081_0027523
520 nmdc:mga05p37_123228_c1
521 nmdc:mga05p37_12636_c1
522 nmdc:mga05p37_12738_c1
523 nmdc:mga05p37_40518_c1
524 nmdc:mga05p37_50703_c1
525 nmdc:mga09592_1556_c1
526 nmdc:mga09592_18045_c1
527 nmdc:mga0qj67_1528_c1
528 nmdc:mga06r32_121096_c1
529 nmdc:mga06r32_3139_c1
530 nmdc:mga06r32_69326_c1
531 nmdc:mga08y16_102486_c1
532 nmdc:mga08y16_134937_c1
533 nmdc:mga08y16_5450_c1
534 nmdc:mga08y16_6534_c1
535 nmdc:mga0n895_4008_c1
536 nmdc:mga0n895_5675_c1
537 nmdc:mga0rr50_19225_c1
538 nmdc:mga0rr50_4295_c1
539 nmdc:mga08x19_50109_c1
540 nmdc:mga0a205_12336_c1
541 nmdc:mga0a205_59446_c1
542 nmdc:mga0a205_725_c1
543 Ga0495601_0009843
544 Ga0495595_0025628
545 Ga0590071_000388
546 Ga0590075_000608
547 Ga0590077_000634
548 2787435814

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03119

DNA_ligase_ZBD

NAD-dependent DNA ligase C4 zinc finger domain

448

473

0.99

PF12826

HHH_2

Helix-hairpin-helix motif

562

625

0.98

PF03120

DNA_ligase_OB

NAD-dependent DNA ligase OB-fold domain

362

440

0.97

PF22745

Nlig-Ia

DNA ligase-like, N-terminal NAD+-binding domain

20

78

0.93

PF00533

BRCT

BRCA1 C Terminus (BRCT) domain

647

722

0.91

PF01653

DNA_ligase_aden

NAD-dependent DNA ligase adenylation domain

84

359

0.9

PF12738

PTCB-BRCT

twin BRCT domain

656

714

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ebu-assembly1.cif.gz_A solution structure of the brct domain from human replication factor c large subunit 1 0.8889 618 694
3bac-assembly1.cif.gz_A-2 structural basis for the inhibition of bacterial nad+ dependent dna ligase 0.8798 68 331
3bac-assembly1.cif.gz_A-2 structural basis for the inhibition of bacterial nad+ dependent dna ligase 0.8697 68 331
1x2i-assembly1.cif.gz_B crystal structure of archaeal xpf/mus81 homolog, hef from pyrococcus furiosus, helix-hairpin-helix domain 0.8654 532 587
8dr3-assembly1.cif.gz_A closed state of rfc:pcna bound to a 3' ss/dsdna junction (dna2) with ntd 0.8604 622 696
ID Description Score Start End Superfamily
af_Q2G1Y0_497_576_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9868 529 606 1.10.150.20
5tt5A05 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.978 530 605 1.10.150.20
af_P9WNV1_524_596_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9776 530 601 1.10.150.20
4ucvA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9738 1 60 1.10.287.610
4uctA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9734 1 60 1.10.287.610
ID Description Score Start End GO Terms
AF-A0A2J0MVZ1-F1-model_v4 NAD-dependent DNA ligase LigA 0.9854 622 693 GO:0016874
AF-A0A7V6BDZ0-F1-model_v4 NAD-dependent DNA ligase LigA (EC 6.5.1.2) 0.9853 622 693 GO:0003911
AF-A0A7V1WW96-F1-model_v4 BRCT domain-containing protein 0.9843 628 694
AF-A0A0K2REM2-F1-model_v4 DNA ligase 1 0.9823 621 693 GO:0016874
AF-A0A3M1SFT7-F1-model_v4 NAD-dependent DNA ligase LigA 0.9813 628 696 GO:0016874

Map