F379556

General Info

Members Datasets Scaffolds Average Seq Length
274 157 274 237

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100000607|Ga0070694_10000060718
Length 275
Sequence MTPSLTVGFLPSLTIMSTAKDKLIVALDVDDANRALELCDALRESVGMFKVGMQLFTAAGPDVVRQIIARGGRVFLDLKYHDIPNTVAMAGVEATRLGVSIFNVHASGGSEMMKRAAEAVAETAQRETLAKPRVIAVTVLTSIDQQTLQQIGIAEEAESVVTRLAFLAKHSGLDGVVASAQEIRTIRDAVLDPDFLVVIPGIRGASASSDDQRRTMSAGDAVKAGANYLVIGRPILAAPDPTDAARRIVEEIAAALKAEPQPADLAEQSHAQSVY

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
116 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
120 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
121 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
124 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
127 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.09
Rhizosphere 98.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_2140730 2162886006 Bacteria 1498
2 SwRhRL3b_contig_230445 2162886006 Bacteria 1454
3 JGI25406J46586_10000322 3300003203 Bacteria 21549
4 Ga0065704_10160331 3300005289 Bacteria 1359
5 Ga0065707_10033601 3300005295 Bacteria 2041
6 Ga0065707_10083768 3300005295 Bacteria 8286
7 Ga0070676_10030690 3300005328 Bacteria 3067
8 Ga0070690_100026414 3300005330 Bacteria 3582
9 Ga0070690_100038107 3300005330 Bacteria 3032
10 Ga0070690_100049422 3300005330 Bacteria 2681
11 Ga0070690_100106360 3300005330 Bacteria 1866
12 Ga0070670_100003185 3300005331 Bacteria 13546
13 Ga0070670_100050959 3300005331 Bacteria 3556
14 Ga0070670_100254413 3300005331 Unclassified 1530
15 Ga0068869_100102348 3300005334 Unclassified 2168
16 Ga0068869_100222658 3300005334 Bacteria 1496
17 Ga0068869_100381917 3300005334 Bacteria 1155
18 Ga0070666_10306447 3300005335 Bacteria 1132
19 Ga0070680_100248359 3300005336 Bacteria 1504
20 Ga0068868_100231566 3300005338 Bacteria 1550
21 Ga0070689_100063359 3300005340 Bacteria 2877
22 Ga0070689_100145475 3300005340 Bacteria 1909
23 Ga0070689_100194930 3300005340 Bacteria 1651
24 Ga0070687_100052601 3300005343 Bacteria 2114
25 Ga0070668_100005033 3300005347 Bacteria 9787
26 Ga0070668_100124234 3300005347 Bacteria 2066
27 Ga0070669_100091292 3300005353 Unclassified 2284
28 Ga0070675_100000133 3300005354 Bacteria 44841
29 Ga0070675_100008290 3300005354 Bacteria 8062
30 Ga0070675_100076069 3300005354 Bacteria 2791
31 Ga0070675_100137043 3300005354 Bacteria 2089
32 Ga0070675_100145618 3300005354 Bacteria 2028
33 Ga0070671_100020071 3300005355 Bacteria 5445
34 Ga0070671_100127060 3300005355 Bacteria 2147
35 Ga0070674_100011182 3300005356 Bacteria 5452
36 Ga0070673_100065963 3300005364 Bacteria 2890
37 Ga0070688_100007350 3300005365 Bacteria 5937
38 Ga0070688_100017755 3300005365 Bacteria 4089
39 Ga0070688_100095982 3300005365 Bacteria 1947
40 Ga0070688_100153957 3300005365 Bacteria 1574
41 Ga0070667_100003135 3300005367 Bacteria 14197
42 Ga0070667_100004334 3300005367 Bacteria 11968
43 Ga0070667_100127615 3300005367 Bacteria 2218
44 Ga0070667_100337900 3300005367 Bacteria 1361
45 Ga0070703_10000157 3300005406 Bacteria 34432
46 Ga0070701_10004675 3300005438 Bacteria 5577
47 Ga0070705_100371527 3300005440 Unclassified 1049
48 Ga0070700_100003956 3300005441 Bacteria 7696
49 Ga0070700_100301328 3300005441 Bacteria 1170
50 Ga0070694_100000607 3300005444 Bacteria 19750
51 Ga0070694_100084532 3300005444 Bacteria 2214
52 Ga0070708_100056316 3300005445 Bacteria 3497
53 Ga0070663_100454739 3300005455 Bacteria 1056
54 Ga0070678_100028228 3300005456 Bacteria 3824
55 Ga0070678_100093148 3300005456 Bacteria 2316
56 Ga0068867_100010558 3300005459 Bacteria 6516
57 Ga0070685_10018600 3300005466 Bacteria 3739
58 Ga0070685_10047822 3300005466 Bacteria 2462
59 Ga0070706_100017166 3300005467 Bacteria 6685
60 Ga0070706_100020592 3300005467 Bacteria 6078
61 Ga0070706_100415325 3300005467 Unclassified 1252
62 Ga0070707_100005609 3300005468 Bacteria 11730
63 Ga0070707_100006877 3300005468 Bacteria 10534
64 Ga0070707_100115407 3300005468 Bacteria 2606
65 Ga0070698_100005034 3300005471 Bacteria 14478
66 Ga0070698_100025651 3300005471 Bacteria 6141
67 Ga0070698_100189599 3300005471 Bacteria 1994
68 Ga0070697_100000683 3300005536 Bacteria 25520
69 Ga0070697_100026526 3300005536 Bacteria 4630
70 Ga0070697_100075768 3300005536 Bacteria 2766
71 Ga0070697_100382607 3300005536 Bacteria 1219
72 Ga0070672_100004449 3300005543 Bacteria 9174
73 Ga0070672_100035629 3300005543 Bacteria 3784
74 Ga0070695_100235107 3300005545 Unclassified 1327
75 Ga0070696_100064080 3300005546 Viruses 2575
76 Ga0070665_100295844 3300005548 Bacteria 1621
77 Ga0070704_100426346 3300005549 Bacteria 1137
78 Ga0070704_100611078 3300005549 Unclassified 959
79 Ga0070664_100119118 3300005564 Bacteria 2310
80 Ga0068857_100204196 3300005577 Bacteria 1802
81 Ga0070702_100016717 3300005615 Bacteria 3770
82 Ga0068859_100010137 3300005617 Bacteria 9493
83 Ga0068859_100016184 3300005617 Bacteria 7491
84 Ga0068859_100035071 3300005617 Bacteria 5033
85 Ga0068859_100120282 3300005617 Bacteria 2693
86 Ga0068859_101316298 3300005617 Viruses 796
87 Ga0068864_100106162 3300005618 Bacteria 2497
88 Ga0068864_100453721 3300005618 Bacteria 1226
89 Ga0068863_100001243 3300005841 Bacteria 25378
90 Ga0068863_100701993 3300005841 Bacteria 1006
91 Ga0068858_100016300 3300005842 Bacteria 6981
92 Ga0068860_100001735 3300005843 Bacteria 23234
93 Ga0068860_100324675 3300005843 Bacteria 1511
94 Ga0068862_100086247 3300005844 Bacteria 2729
95 Ga0068862_100152463 3300005844 Bacteria 2058
96 Ga0081539_10000156 3300005985 Bacteria 158871
97 Ga0081539_10001684 3300005985 Bacteria 35711
98 Ga0070715_10000069 3300006163 Bacteria 33014
99 Ga0070716_100000009 3300006173 Bacteria 173295
100 Ga0097621_100008303 3300006237 Bacteria 7472
101 Ga0068871_100023275 3300006358 Bacteria 4789
102 Ga0068871_100074949 3300006358 Bacteria 2793
103 Ga0075428_100204821 3300006844 Bacteria 2132
104 Ga0075428_100448550 3300006844 Bacteria 1382
105 Ga0075431_100517286 3300006847 Bacteria 1183
106 Ga0075433_10433960 3300006852 Bacteria 1158
107 Ga0075434_100169632 3300006871 Bacteria 2202
108 Ga0068865_100436417 3300006881 Bacteria 1080
109 Ga0075436_100000016 3300006914 Bacteria 167300
110 Ga0097620_100010137 3300006931 Bacteria 9493
111 Ga0097620_100016184 3300006931 Bacteria 7491
112 Ga0097620_100035072 3300006931 Bacteria 5033
113 Ga0097620_100120283 3300006931 Bacteria 2693
114 Ga0097620_101315875 3300006931 Viruses 796
115 Ga0075435_100005026 3300007076 Bacteria 9184
116 Ga0075435_100027202 3300007076 Bacteria 4471
117 Ga0099794_10001391 3300007265 Bacteria 8434
118 Ga0111539_10149591 3300009094 Bacteria 2733
119 Ga0111539_10291707 3300009094 Bacteria 1898
120 Ga0111539_10471134 3300009094 Bacteria 1462
121 Ga0111539_10939421 3300009094 Bacteria 1006
122 Ga0105247_10429299 3300009101 Bacteria 948
123 Ga0105243_10000022 3300009148 Bacteria 203002
124 Ga0105243_10000436 3300009148 Bacteria 43715
125 Ga0105243_10033719 3300009148 Bacteria 3960
126 Ga0105243_10229542 3300009148 Bacteria 1646
127 Ga0105242_10000014 3300009176 Bacteria 129984
128 Ga0105242_10006286 3300009176 Bacteria 9153
129 Ga0105242_10012340 3300009176 Bacteria 6574
130 Ga0105248_10000748 3300009177 Bacteria 36506
131 Ga0105248_10629842 3300009177 Bacteria 1210
132 Ga0105249_10421025 3300009553 Bacteria 1369
133 Ga0157374_10031618 3300013296 Bacteria 4813
134 Ga0157374_10036920 3300013296 Bacteria 4479
135 Ga0157378_10000379 3300013297 Bacteria 43998
136 Ga0157378_10006925 3300013297 Bacteria 9900
137 Ga0157378_10055240 3300013297 Bacteria 3537
138 Ga0157378_10066538 3300013297 Bacteria 3228
139 Ga0157378_10118494 3300013297 Bacteria 2437
140 Ga0157378_10459749 3300013297 Bacteria 1264
141 Ga0163162_10020208 3300013306 Bacteria 6541
142 Ga0163162_10024683 3300013306 Bacteria 5937
143 Ga0163162_10104931 3300013306 Bacteria 2921
144 Ga0157372_10016510 3300013307 Bacteria 7922
145 Ga0157375_10000189 3300013308 Bacteria 57574
146 Ga0157375_10002077 3300013308 Bacteria 17327
147 Ga0157375_10006994 3300013308 Bacteria 9852
148 Ga0157375_10027585 3300013308 Bacteria 5309
149 Ga0157380_10004637 3300014326 Bacteria 9555
150 Ga0157380_10008723 3300014326 Bacteria 7244
151 Ga0157380_10031533 3300014326 Bacteria 4069
152 Ga0157380_10279857 3300014326 Unclassified 1526
153 Ga0157377_10153241 3300014745 Bacteria 1427
154 Ga0157379_10000057 3300014968 Bacteria 70302
155 Ga0157379_10174435 3300014968 Bacteria 1941
156 Ga0157376_10484239 3300014969 Bacteria 1213
157 Ga0157376_10528866 3300014969 Bacteria 1163
158 Ga0207697_10001475 3300025315 Bacteria 12851
159 Ga0207697_10011549 3300025315 Bacteria 3733
160 Ga0207653_10000118 3300025885 Bacteria 55787
161 Ga0207688_10009087 3300025901 Bacteria 5410
162 Ga0207688_10162816 3300025901 Bacteria 1323
163 Ga0207685_10000033 3300025905 Bacteria 68415
164 Ga0207645_10060134 3300025907 Bacteria 2426
165 Ga0207684_10187737 3300025910 Bacteria 1782
166 Ga0207684_10493288 3300025910 Unclassified 1050
167 Ga0207646_10011256 3300025922 Bacteria 8689
168 Ga0207646_10037391 3300025922 Bacteria 4377
169 Ga0207646_10097707 3300025922 Bacteria 2631
170 Ga0207681_10159922 3300025923 Bacteria 1697
171 Ga0207681_10183966 3300025923 Unclassified 1594
172 Ga0207650_10131721 3300025925 Bacteria 1957
173 Ga0207659_10000706 3300025926 Bacteria 19801
174 Ga0207659_10005063 3300025926 Bacteria 7995
175 Ga0207659_10176001 3300025926 Bacteria 1691
176 Ga0207659_10651324 3300025926 Bacteria 900
177 Ga0207644_10013744 3300025931 Bacteria 5405
178 Ga0207644_10013854 3300025931 Bacteria 5386
179 Ga0207644_10036080 3300025931 Bacteria 3469
180 Ga0207644_10123357 3300025931 Bacteria 1975
181 Ga0207644_10426870 3300025931 Bacteria 1087
182 Ga0207686_10000002 3300025934 Bacteria 453961
183 Ga0207686_10002972 3300025934 Bacteria 9140
184 Ga0207686_10020751 3300025934 Bacteria 3758
185 Ga0207709_10000012 3300025935 Bacteria 552803
186 Ga0207709_10000899 3300025935 Bacteria 22461
187 Ga0207709_10085832 3300025935 Bacteria 2042
188 Ga0207670_10172106 3300025936 Bacteria 1625
189 Ga0207669_10250962 3300025937 Bacteria 1317
190 Ga0207704_10206127 3300025938 Bacteria 1443
191 Ga0207704_10216256 3300025938 Bacteria 1414
192 Ga0207665_10000001 3300025939 Bacteria 279842
193 Ga0207691_10000755 3300025940 Bacteria 31945
194 Ga0207691_10010753 3300025940 Bacteria 8784
195 Ga0207691_10139116 3300025940 Bacteria 2140
196 Ga0207711_10000565 3300025941 Bacteria 37724
197 Ga0207689_10022922 3300025942 Bacteria 5244
198 Ga0207689_10064284 3300025942 Bacteria 3019
199 Ga0207651_10009757 3300025960 Bacteria 5278
200 Ga0207651_10024876 3300025960 Bacteria 3712
201 Ga0207651_10067009 3300025960 Bacteria 2525
202 Ga0207651_10073244 3300025960 Bacteria 2435
203 Ga0207651_10074544 3300025960 Bacteria 2417
204 Ga0207668_10177503 3300025972 Bacteria 1677
205 Ga0207668_10316040 3300025972 Bacteria 1294
206 Ga0207658_10026934 3300025986 Bacteria 4035
207 Ga0207677_10456102 3300026023 Bacteria 1096
208 Ga0207703_10040565 3300026035 Bacteria 3726
209 Ga0207703_10066769 3300026035 Bacteria 2959
210 Ga0207678_10205664 3300026067 Bacteria 1684
211 Ga0207678_10338572 3300026067 Bacteria 1296
212 Ga0207708_10032199 3300026075 Unclassified 3983
213 Ga0207708_10288725 3300026075 Bacteria 1331
214 Ga0207641_10000943 3300026088 Bacteria 29987
215 Ga0207648_10008089 3300026089 Bacteria 10240
216 Ga0207676_10254727 3300026095 Bacteria 1582
217 Ga0207676_10329714 3300026095 Bacteria 1404
218 Ga0207683_10017241 3300026121 Bacteria 6151
219 Ga0207683_10209478 3300026121 Bacteria 1774
220 Ga0209588_1026093 3300027671 Bacteria 1853
221 Ga0207428_10002586 3300027907 Bacteria 18072
222 Ga0268266_10015610 3300028379 Bacteria 6509
223 Ga0268266_10224731 3300028379 Bacteria 1727
224 Ga0268265_10069430 3300028380 Bacteria 2736
225 Ga0268264_10001599 3300028381 Bacteria 20955
226 Ga0268264_10594301 3300028381 Bacteria 1090
227 Ga0373941_0061437 3300035115 Unclassified 1224
228 Ga0373943_0273806 3300035170 Bacteria 953
229 Ga0373955_0100281 3300035172 Bacteria 1661
230 Ga0373935_0270216 3300035692 Bacteria 1195
231 Ga0439453_0042230 3300041408 Bacteria 898
232 Ga0495580_0075946 3300046472 Bacteria 2344
233 Ga0495664_0132305 3300046477 Bacteria 1511
234 Ga0495618_0272954 3300046514 Bacteria 1056
235 Ga0495630_0260877 3300046517 Bacteria 1324
236 Ga0495659_0010720 3300046664 Bacteria 2948
237 Ga0495623_0306516 3300046679 Bacteria 876
238 Ga0495646_0283044 3300046680 Bacteria 881
239 Ga0495658_0030475 3300046683 Bacteria 2929
240 Ga0495636_0163776 3300047318 Bacteria 1003
241 Ga0495672_0019273 3300047320 Bacteria 4505
242 Ga0495675_0032536 3300047444 Bacteria 3328
243 Ga0495684_0068360 3300047471 Bacteria 2701
244 Ga0496106_0011120 3300048909 Bacteria 6656
245 Ga0496109_0685114 3300048912 Bacteria 962
246 Ga0496110_0243669 3300048913 Bacteria 1636
247 Ga0501031_0005951 3300049568 Bacteria 7956
248 Ga0501039_0012915 3300049575 Bacteria 6386
249 Ga0501040_0004815 3300049576 Bacteria 8746
250 Ga0501041_0007601 3300049577 Bacteria 6364
251 Ga0501048_0012370 3300049582 Bacteria 6348
252 Ga0501068_0192160 3300049584 Bacteria 1293
253 Ga0501072_0005037 3300049588 Bacteria 10048
254 Ga0501074_0172993 3300049590 Bacteria 1541
255 Ga0501076_0005912 3300049592 Bacteria 8831
256 Ga0501080_0164003 3300049742 Bacteria 2051
257 Ga0501081_0036703 3300049743 Bacteria 3342
258 Ga0501045_0012404 3300049824 Bacteria 6001
259 nmdc:mga09592_148399_c1 3300050508 Bacteria 2022
260 nmdc:mga0qj67_506271_c1 3300050509 Bacteria 970
261 nmdc:mga08y16_15261_c1 3300050511 Bacteria 8082
262 nmdc:mga08y16_312929_c1 3300050511 Bacteria 1617
263 nmdc:mga08y16_81140_c1 3300050511 Bacteria 3381
264 nmdc:mga0n895_2175_c1 3300050512 Bacteria 15165
265 nmdc:mga0n895_33531_c1 3300050512 Unclassified 4936
266 nmdc:mga0rr50_192832_c1 3300050513 Bacteria 1671
267 nmdc:mga0rr50_2002_c1 3300050513 Bacteria 11332
268 nmdc:mga08x19_8_c1 3300050514 Bacteria 427794
269 nmdc:mga0a205_195713_c1 3300050515 Bacteria 1912
270 nmdc:mga0a205_67096_c1 3300050515 Bacteria 3465
271 Ga0495601_0021047 3300053077 Bacteria 3990
272 Ga0495655_0018448 3300053083 Bacteria 1533
273 Ga0501082_0227757 3300060353 Bacteria 1622
274 Ga0530510_0077940 3300061734 Bacteria 2408

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005468 Ga0070707_100115407 Ga0070707_1001154075 201
2 3300005471 Ga0070698_100189599 Ga0070698_1001895992 201
3 3300025922 Ga0207646_10097707 Ga0207646_100977071 201
4 3300035172 Ga0373955_0100281 Ga0373955_0100281_580_1287 205
5 3300046477 Ga0495664_0132305 Ga0495664_0132305_145_852 205
6 3300046514 Ga0495618_0272954 Ga0495618_0272954_16_723 205
7 3300046517 Ga0495630_0260877 Ga0495630_0260877_301_1008 205
8 3300046679 Ga0495623_0306516 Ga0495623_0306516_24_731 205
9 3300046680 Ga0495646_0283044 Ga0495646_0283044_164_871 205
10 3300047444 Ga0495675_0032536 Ga0495675_0032536_16_723 205
11 3300047471 Ga0495684_0068360 Ga0495684_0068360_1876_2652 205
12 3300053077 Ga0495601_0021047 Ga0495601_0021047_3079_3786 205
13 3300027671 Ga0209588_1026093 Ga0209588_10260932 224
14 3300050515 nmdc:mga0a205_195713_c1 nmdc:mga0a205_195713_c1_202_948 224
15 3300005536 Ga0070697_100382607 Ga0070697_1003826071 226
16 3300005617 Ga0068859_101316298 Ga0068859_1013162981 226
17 3300006163 Ga0070715_10000069 Ga0070715_1000006923 226
18 3300006931 Ga0097620_101315875 Ga0097620_1013158751 226
19 3300014326 Ga0157380_10279857 Ga0157380_102798572 226
20 3300049568 Ga0501031_0005951 Ga0501031_0005951_3803_4483 226
21 3300049575 Ga0501039_0012915 Ga0501039_0012915_147_827 226
22 3300049576 Ga0501040_0004815 Ga0501040_0004815_1884_2564 226
23 3300049577 Ga0501041_0007601 Ga0501041_0007601_640_1320 226
24 3300049582 Ga0501048_0012370 Ga0501048_0012370_5154_5834 226
25 3300049584 Ga0501068_0192160 Ga0501068_0192160_287_967 226
26 3300049588 Ga0501072_0005037 Ga0501072_0005037_8946_9626 226
27 3300049590 Ga0501074_0172993 Ga0501074_0172993_412_1092 226
28 3300049592 Ga0501076_0005912 Ga0501076_0005912_4157_4837 226
29 3300049742 Ga0501080_0164003 Ga0501080_0164003_93_773 226
30 3300049743 Ga0501081_0036703 Ga0501081_0036703_543_1223 226
31 3300049824 Ga0501045_0012404 Ga0501045_0012404_3679_4359 226
32 3300060353 Ga0501082_0227757 Ga0501082_0227757_899_1579 226
33 3300061734 Ga0530510_0077940 Ga0530510_0077940_445_1125 226
34 3300025905 Ga0207685_10000033 Ga0207685_100000336 227
35 3300050508 nmdc:mga09592_148399_c1 nmdc:mga09592_148399_c1_53_736 227
36 3300005328 Ga0070676_10030690 Ga0070676_100306903 228
37 3300005577 Ga0068857_100204196 Ga0068857_1002041962 228
38 3300013297 Ga0157378_10118494 Ga0157378_101184943 228
39 3300025907 Ga0207645_10060134 Ga0207645_100601342 228
40 3300026095 Ga0207676_10329714 Ga0207676_103297142 228
41 3300005330 Ga0070690_100038107 Ga0070690_1000381073 229
42 3300005330 Ga0070690_100106360 Ga0070690_1001063602 229
43 3300005331 Ga0070670_100003185 Ga0070670_1000031858 229
44 3300005331 Ga0070670_100050959 Ga0070670_1000509593 229
45 3300005331 Ga0070670_100254413 Ga0070670_1002544132 229
46 3300005335 Ga0070666_10306447 Ga0070666_103064472 229
47 3300005338 Ga0068868_100231566 Ga0068868_1002315662 229
48 3300005347 Ga0070668_100005033 Ga0070668_10000503312 229
49 3300005347 Ga0070668_100124234 Ga0070668_1001242342 229
50 3300005353 Ga0070669_100091292 Ga0070669_1000912922 229
51 3300005354 Ga0070675_100076069 Ga0070675_1000760692 229
52 3300005354 Ga0070675_100137043 Ga0070675_1001370432 229
53 3300005355 Ga0070671_100127060 Ga0070671_1001270602 229
54 3300005356 Ga0070674_100011182 Ga0070674_1000111827 229
55 3300005365 Ga0070688_100017755 Ga0070688_1000177555 229
56 3300005367 Ga0070667_100004334 Ga0070667_10000433413 229
57 3300005367 Ga0070667_100127615 Ga0070667_1001276152 229
58 3300005367 Ga0070667_100337900 Ga0070667_1003379001 229
59 3300005455 Ga0070663_100454739 Ga0070663_1004547391 229
60 3300005456 Ga0070678_100028228 Ga0070678_1000282284 229
61 3300005456 Ga0070678_100093148 Ga0070678_1000931482 229
62 3300005459 Ga0068867_100010558 Ga0068867_1000105589 229
63 3300005543 Ga0070672_100004449 Ga0070672_1000044499 229
64 3300005548 Ga0070665_100295844 Ga0070665_1002958441 229
65 3300005564 Ga0070664_100119118 Ga0070664_1001191182 229
66 3300005618 Ga0068864_100453721 Ga0068864_1004537212 229
67 3300005841 Ga0068863_100701993 Ga0068863_1007019932 229
68 3300005843 Ga0068860_100324675 Ga0068860_1003246752 229
69 3300005985 Ga0081539_10001684 Ga0081539_100016848 229
70 3300006358 Ga0068871_100074949 Ga0068871_1000749494 229
71 3300006844 Ga0075428_100448550 Ga0075428_1004485502 229
72 3300006847 Ga0075431_100517286 Ga0075431_1005172862 229
73 3300006881 Ga0068865_100436417 Ga0068865_1004364172 229
74 3300009094 Ga0111539_10471134 Ga0111539_104711342 229
75 3300013296 Ga0157374_10031618 Ga0157374_100316183 229
76 3300013296 Ga0157374_10036920 Ga0157374_100369206 229
77 3300013297 Ga0157378_10066538 Ga0157378_100665382 229
78 3300013297 Ga0157378_10459749 Ga0157378_104597492 229
79 3300013306 Ga0163162_10020208 Ga0163162_100202083 229
80 3300013306 Ga0163162_10104931 Ga0163162_101049312 229
81 3300013308 Ga0157375_10002077 Ga0157375_100020772 229
82 3300013308 Ga0157375_10027585 Ga0157375_100275856 229
83 3300014969 Ga0157376_10528866 Ga0157376_105288662 229
84 3300025315 Ga0207697_10001475 Ga0207697_1000147512 229
85 3300025315 Ga0207697_10011549 Ga0207697_100115494 229
86 3300025901 Ga0207688_10009087 Ga0207688_100090878 229
87 3300025901 Ga0207688_10162816 Ga0207688_101628162 229
88 3300025910 Ga0207684_10187737 Ga0207684_101877371 229
89 3300025923 Ga0207681_10183966 Ga0207681_101839662 229
90 3300025925 Ga0207650_10131721 Ga0207650_101317212 229
91 3300025926 Ga0207659_10176001 Ga0207659_101760012 229
92 3300025926 Ga0207659_10651324 Ga0207659_106513242 229
93 3300025931 Ga0207644_10013744 Ga0207644_100137447 229
94 3300025931 Ga0207644_10036080 Ga0207644_100360803 229
95 3300025931 Ga0207644_10123357 Ga0207644_101233572 229
96 3300025937 Ga0207669_10250962 Ga0207669_102509621 229
97 3300025938 Ga0207704_10206127 Ga0207704_102061272 229
98 3300025938 Ga0207704_10216256 Ga0207704_102162562 229
99 3300025940 Ga0207691_10000755 Ga0207691_100007552 229
100 3300025940 Ga0207691_10010753 Ga0207691_100107532 229
101 3300025960 Ga0207651_10073244 Ga0207651_100732443 229
102 3300025960 Ga0207651_10074544 Ga0207651_100745443 229
103 3300025972 Ga0207668_10177503 Ga0207668_101775032 229
104 3300025972 Ga0207668_10316040 Ga0207668_103160402 229
105 3300026023 Ga0207677_10456102 Ga0207677_104561022 229
106 3300026067 Ga0207678_10205664 Ga0207678_102056642 229
107 3300026067 Ga0207678_10338572 Ga0207678_103385722 229
108 3300026089 Ga0207648_10008089 Ga0207648_1000808912 229
109 3300026095 Ga0207676_10254727 Ga0207676_102547272 229
110 3300026121 Ga0207683_10017241 Ga0207683_100172417 229
111 3300026121 Ga0207683_10209478 Ga0207683_102094782 229
112 3300028379 Ga0268266_10015610 Ga0268266_100156104 229
113 3300028380 Ga0268265_10069430 Ga0268265_100694302 229
114 3300028381 Ga0268264_10594301 Ga0268264_105943012 229
115 3300035115 Ga0373941_0061437 Ga0373941_0061437_254_961 229
116 3300035170 Ga0373943_0273806 Ga0373943_0273806_21_731 229
117 3300035692 Ga0373935_0270216 Ga0373935_0270216_273_983 229
118 3300046683 Ga0495658_0030475 Ga0495658_0030475_387_1097 229
119 3300048912 Ga0496109_0685114 Ga0496109_0685114_25_801 229
120 3300050509 nmdc:mga0qj67_506271_c1 nmdc:mga0qj67_506271_c1_118_894 229
121 3300050511 nmdc:mga08y16_81140_c1 nmdc:mga08y16_81140_c1_746_1453 229
122 3300005340 Ga0070689_100194930 Ga0070689_1001949302 230
123 3300005354 Ga0070675_100008290 Ga0070675_1000082906 230
124 3300005354 Ga0070675_100145618 Ga0070675_1001456183 230
125 3300005365 Ga0070688_100007350 Ga0070688_1000073501 230
126 3300005466 Ga0070685_10047822 Ga0070685_100478223 230
127 3300005467 Ga0070706_100020592 Ga0070706_1000205923 230
128 3300005549 Ga0070704_100426346 Ga0070704_1004263461 230
129 3300005617 Ga0068859_100016184 Ga0068859_1000161842 230
130 3300005844 Ga0068862_100086247 Ga0068862_1000862472 230
131 3300006931 Ga0097620_100016184 Ga0097620_1000161842 230
132 3300009094 Ga0111539_10149591 Ga0111539_101495913 230
133 3300009094 Ga0111539_10291707 Ga0111539_102917072 230
134 3300009176 Ga0105242_10012340 Ga0105242_100123407 230
135 3300014326 Ga0157380_10031533 Ga0157380_100315335 230
136 3300025926 Ga0207659_10005063 Ga0207659_100050633 230
137 3300025934 Ga0207686_10020751 Ga0207686_100207512 230
138 3300025936 Ga0207670_10172106 Ga0207670_101721062 230
139 3300025960 Ga0207651_10067009 Ga0207651_100670091 230
140 3300027907 Ga0207428_10002586 Ga0207428_100025869 230
141 3300047318 Ga0495636_0163776 Ga0495636_0163776_61_753 230
142 3300050511 nmdc:mga08y16_15261_c1 nmdc:mga08y16_15261_c1_5866_6558 230
143 3300005330 Ga0070690_100026414 Ga0070690_1000264142 232
144 3300005340 Ga0070689_100063359 Ga0070689_1000633592 232
145 3300005343 Ga0070687_100052601 Ga0070687_1000526011 232
146 3300005354 Ga0070675_100000133 Ga0070675_1000001337 232
147 3300005355 Ga0070671_100020071 Ga0070671_1000200715 232
148 3300005364 Ga0070673_100065963 Ga0070673_1000659632 232
149 3300005365 Ga0070688_100095982 Ga0070688_1000959821 232
150 3300005367 Ga0070667_100003135 Ga0070667_1000031352 232
151 3300005441 Ga0070700_100301328 Ga0070700_1003013282 232
152 3300005466 Ga0070685_10018600 Ga0070685_100186002 232
153 3300005543 Ga0070672_100035629 Ga0070672_1000356292 232
154 3300005617 Ga0068859_100010137 Ga0068859_1000101372 232
155 3300005618 Ga0068864_100106162 Ga0068864_1001061622 232
156 3300005841 Ga0068863_100001243 Ga0068863_10000124317 232
157 3300005842 Ga0068858_100016300 Ga0068858_1000163007 232
158 3300005843 Ga0068860_100001735 Ga0068860_1000017353 232
159 3300006237 Ga0097621_100008303 Ga0097621_1000083034 232
160 3300006358 Ga0068871_100023275 Ga0068871_1000232753 232
161 3300006852 Ga0075433_10433960 Ga0075433_104339602 232
162 3300006871 Ga0075434_100169632 Ga0075434_1001696322 232
163 3300006931 Ga0097620_100010137 Ga0097620_1000101379 232
164 3300007076 Ga0075435_100027202 Ga0075435_1000272025 232
165 3300009101 Ga0105247_10429299 Ga0105247_104292991 232
166 3300009177 Ga0105248_10000748 Ga0105248_1000074834 232
167 3300013306 Ga0163162_10024683 Ga0163162_100246834 232
168 3300013307 Ga0157372_10016510 Ga0157372_100165109 232
169 3300013308 Ga0157375_10000189 Ga0157375_1000018936 232
170 3300014745 Ga0157377_10153241 Ga0157377_101532412 232
171 3300014968 Ga0157379_10000057 Ga0157379_1000005735 232
172 3300014969 Ga0157376_10484239 Ga0157376_104842391 232
173 3300025926 Ga0207659_10000706 Ga0207659_1000070615 232
174 3300025931 Ga0207644_10013854 Ga0207644_100138542 232
175 3300025940 Ga0207691_10139116 Ga0207691_101391162 232
176 3300025941 Ga0207711_10000565 Ga0207711_1000056535 232
177 3300025960 Ga0207651_10024876 Ga0207651_100248762 232
178 3300025986 Ga0207658_10026934 Ga0207658_100269343 232
179 3300026035 Ga0207703_10040565 Ga0207703_100405652 232
180 3300026075 Ga0207708_10288725 Ga0207708_102887252 232
181 3300026088 Ga0207641_10000943 Ga0207641_1000094317 232
182 3300028379 Ga0268266_10224731 Ga0268266_102247312 232
183 3300028381 Ga0268264_10001599 Ga0268264_100015993 232
184 3300046472 Ga0495580_0075946 Ga0495580_0075946_565_1386 232
185 3300048913 Ga0496110_0243669 Ga0496110_0243669_54_752 232
186 3300050512 nmdc:mga0n895_2175_c1 nmdc:mga0n895_2175_c1_1464_2162 232
187 3300050513 nmdc:mga0rr50_192832_c1 nmdc:mga0rr50_192832_c1_597_1295 232
188 3300050515 nmdc:mga0a205_67096_c1 nmdc:mga0a205_67096_c1_2506_3204 232
189 3300009094 Ga0111539_10939421 Ga0111539_109394212 233
190 3300050511 nmdc:mga08y16_312929_c1 nmdc:mga08y16_312929_c1_739_1440 233
191 3300005438 Ga0070701_10004675 Ga0070701_100046752 234
192 3300005617 Ga0068859_100120282 Ga0068859_1001202822 234
193 3300006931 Ga0097620_100120283 Ga0097620_1001202832 234
194 3300013297 Ga0157378_10006925 Ga0157378_100069251 234
195 3300014326 Ga0157380_10004637 Ga0157380_100046371 234
196 3300025942 Ga0207689_10064284 Ga0207689_100642843 234
197 3300005334 Ga0068869_100222658 Ga0068869_1002226581 236
198 3300005340 Ga0070689_100145475 Ga0070689_1001454752 236
199 3300005365 Ga0070688_100153957 Ga0070688_1001539572 236
200 3300009177 Ga0105248_10629842 Ga0105248_106298422 236
201 3300026035 Ga0207703_10066769 Ga0207703_100667693 236
202 3300014326 Ga0157380_10008723 Ga0157380_100087236 239
203 3300014968 Ga0157379_10174435 Ga0157379_101744352 240
204 3300005330 Ga0070690_100049422 Ga0070690_1000494222 241
205 3300005615 Ga0070702_100016717 Ga0070702_1000167172 241
206 3300006173 Ga0070716_100000009 Ga0070716_10000000922 241
207 3300025939 Ga0207665_10000001 Ga0207665_10000001124 241
208 3300005467 Ga0070706_100017166 Ga0070706_1000171665 242
209 3300005468 Ga0070707_100006877 Ga0070707_1000068775 242
210 3300005536 Ga0070697_100026526 Ga0070697_1000265265 242
211 3300025922 Ga0207646_10011256 Ga0207646_100112566 242
212 3300003203 JGI25406J46586_10000322 JGI25406J46586_100003222 243
213 3300005336 Ga0070680_100248359 Ga0070680_1002483592 243
214 3300005985 Ga0081539_10000156 Ga0081539_1000015661 243
215 3300006914 Ga0075436_100000016 Ga0075436_100000016107 243
216 3300007076 Ga0075435_100005026 Ga0075435_1000050263 243
217 3300025923 Ga0207681_10159922 Ga0207681_101599222 243
218 3300041408 Ga0439453_0042230 Ga0439453_0042230_27_770 243
219 3300050513 nmdc:mga0rr50_2002_c1 nmdc:mga0rr50_2002_c1_6372_7109 243
220 3300050514 nmdc:mga08x19_8_c1 nmdc:mga08x19_8_c1_222883_223620 243
221 3300025960 Ga0207651_10009757 Ga0207651_100097574 244
222 3300005289 Ga0065704_10160331 Ga0065704_101603312 245
223 3300005295 Ga0065707_10033601 Ga0065707_100336012 245
224 3300005334 Ga0068869_100102348 Ga0068869_1001023482 245
225 3300005334 Ga0068869_100381917 Ga0068869_1003819171 245
226 3300005440 Ga0070705_100371527 Ga0070705_1003715272 245
227 3300005444 Ga0070694_100084532 Ga0070694_1000845322 245
228 3300005467 Ga0070706_100415325 Ga0070706_1004153251 245
229 3300005471 Ga0070698_100005034 Ga0070698_1000050341 245
230 3300005471 Ga0070698_100025651 Ga0070698_1000256513 245
231 3300005536 Ga0070697_100000683 Ga0070697_10000068313 245
232 3300005536 Ga0070697_100075768 Ga0070697_1000757681 245
233 3300005545 Ga0070695_100235107 Ga0070695_1002351072 245
234 3300005546 Ga0070696_100064080 Ga0070696_1000640802 245
235 3300005549 Ga0070704_100611078 Ga0070704_1006110781 245
236 3300009148 Ga0105243_10000436 Ga0105243_1000043617 245
237 3300009148 Ga0105243_10033719 Ga0105243_100337192 245
238 3300009148 Ga0105243_10229542 Ga0105243_102295422 245
239 3300009176 Ga0105242_10006286 Ga0105242_100062867 245
240 3300013297 Ga0157378_10000379 Ga0157378_1000037916 245
241 3300013308 Ga0157375_10006994 Ga0157375_100069947 245
242 3300025910 Ga0207684_10493288 Ga0207684_104932881 245
243 3300025935 Ga0207709_10085832 Ga0207709_100858322 245
244 3300025942 Ga0207689_10022922 Ga0207689_100229222 245
245 3300047320 Ga0495672_0019273 Ga0495672_0019273_656_1393 245
246 3300048909 Ga0496106_0011120 Ga0496106_0011120_320_1060 245
247 3300025934 Ga0207686_10002972 Ga0207686_100029723 247
248 3300025935 Ga0207709_10000899 Ga0207709_1000089914 247
249 3300050512 nmdc:mga0n895_33531_c1 nmdc:mga0n895_33531_c1_2807_3556 247
250 3300007265 Ga0099794_10001391 Ga0099794_100013914 254
251 3300005468 Ga0070707_100005609 Ga0070707_1000056099 255
252 3300025922 Ga0207646_10037391 Ga0207646_100373912 255
253 3300013297 Ga0157378_10055240 Ga0157378_100552403 258
254 2162886006 SwRhRL3b_contig_2140730 SwRhRL3b_0259.00001650 259
255 2162886006 SwRhRL3b_contig_230445 SwRhRL3b_0330.00001590 259
256 3300005295 Ga0065707_10083768 Ga0065707_100837686 259
257 3300005406 Ga0070703_10000157 Ga0070703_100001573 259
258 3300005441 Ga0070700_100003956 Ga0070700_1000039561 259
259 3300005444 Ga0070694_100000607 Ga0070694_10000060718 259
260 3300005445 Ga0070708_100056316 Ga0070708_1000563162 259
261 3300005617 Ga0068859_100035071 Ga0068859_1000350713 259
262 3300005844 Ga0068862_100152463 Ga0068862_1001524632 259
263 3300006844 Ga0075428_100204821 Ga0075428_1002048212 259
264 3300006931 Ga0097620_100035072 Ga0097620_1000350723 259
265 3300009148 Ga0105243_10000022 Ga0105243_1000002289 259
266 3300009176 Ga0105242_10000014 Ga0105242_1000001479 259
267 3300009553 Ga0105249_10421025 Ga0105249_104210252 259
268 3300025885 Ga0207653_10000118 Ga0207653_100001183 259
269 3300025931 Ga0207644_10426870 Ga0207644_104268701 259
270 3300025934 Ga0207686_10000002 Ga0207686_10000002274 259
271 3300025935 Ga0207709_10000012 Ga0207709_1000001296 259
272 3300026075 Ga0207708_10032199 Ga0207708_100321991 259
273 3300046664 Ga0495659_0010720 Ga0495659_0010720_453_1235 259
274 3300053083 Ga0495655_0018448 Ga0495655_0018448_586_1371 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00215

OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

21

248

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8cso-assembly1.cif.gz_B crystal structure of orotidine 5'-phosphate decarboxylase from klebsiella pneumoniae in complex with uridine-5'-monophosphate 0.9612 8 238
1jjk-assembly1.cif.gz_A selenomethionine substitution of orotidine-5'-monophosphate decarboxylase from e. coli causes a change in crystal contacts and space group 0.9599 7 237
1dbt-assembly2.cif.gz_C-2 crystal structure of orotidine 5'-monophosphate decarboxylase from bacillus subtilis complexed with ump 0.9583 6 238
8dop-assembly2.cif.gz_C crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase from klebsiella aerogenes (p1 form) 0.9562 7 236
8dop-assembly1.cif.gz_A crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase from klebsiella aerogenes (p1 form) 0.9551 7 236
ID Description Score Start End Superfamily
1jjkA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9547 7 237 3.20.20.70
3ru6D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9414 7 237 3.20.20.70
3ldvB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9368 7 237 3.20.20.70
3ru6D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9331 7 237 3.20.20.70
1jjkA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9298 7 237 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A3D2CRY9-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) 0.9956 33 101 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A7Y5Q5G5-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) 0.9908 5 97 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A1F7S3L7-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9896 3 238 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A7C6Y3M5-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) 0.9887 64 237 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A7V5W5P1-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9878 4 238 GO:0004590
GO:0005829
GO:0006207
GO:0044205

Feature Viewer

pLDDT pTM Quality
91.47 0.88 High
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Predicted Structure (AlphaFold2)

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