F379536
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 274 | 192 | 252 | 183 |
Family's Representative Sequence
| Representative Sequence | 3300005434|Ga0070709_10003408|Ga0070709_100034083 |
| Length | 207 |
| Sequence | MELTCCNYYGKECFERNLLLSTPTMDLLKKISTSFPDVFILEPRVFGDERGFFLESYNRKVFAELGITHQFVQDNHSRSTRNVLRGLHYQVQHAQAKLVRVIEGEILDVAVDMRRSSAMFGKSEAVALSGENKRMLWIPAGFAHGFRVVSAVAHVVYKTSDYYAPEYERTLLWSDPQLKIDWQLEGEPIVSAKDQRGVKLRDAESFE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2510065045 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 2 | 2513237083 | Paraburkholderia mimosarum LMG 23256 | Isolate | Nodule |
| 3 | 2513237165 | Cupriavidus neocaledonicus STM6070 | Isolate | Nodule |
| 4 | 2599185240 | Burkholderia sp. NFPP32 | Isolate | Rhizoplane |
| 5 | 2599185355 | Burkholderia sp. NFACC33-1 | Isolate | Rhizoplane |
| 6 | 2600255067 | Paraburkholderia kururiensis thiooxydans NBRC 107107 | Isolate | Unclassified |
| 7 | 2675903129 | Burkholderia pyrrocinia NFIX32 | Isolate | Rhizoplane |
| 8 | 2773857673 | Pseudomonas sp. 443 | Isolate | Unclassified |
| 9 | 2808606384 | Burkholderia sp. SJZ089 | Isolate | Rhizosphere |
| 10 | 2808606390 | Burkholderia sp. SJZ115 | Isolate | Rhizosphere |
| 11 | 2808606391 | Burkholderia sp. SJZ091 | Isolate | Rhizosphere |
| 12 | 2816332286 | Burkholderia vietnamiensis HI2221 | Isolate | Rhizosphere |
| 13 | 2849660919 | Nostoc sp. T09 | Isolate | Unclassified |
| 14 | 2856287931 | Paraburkholderia bannensis BE22 | Isolate | Rhizosphere |
| 15 | 2857357740 | Paraburkholderia tropica BE15 | Isolate | Rhizosphere |
| 16 | 2860867994 | Pseudomonas sp. R1-43-08 | Isolate | Rhizosphere |
| 17 | 2881955468 | Edaphocola flava HME-24 | Isolate | Rhizosphere |
| 18 | 2904518522 | Pseudomonas fluorescens 4488 | Isolate | Rhizosphere |
| 19 | 2929189879 | Pseudomonas sp. R-71842 Hybrid assembly | Isolate | Unclassified |
| 20 | 2946027586 | Pseudomonas sp. W4I3 | Isolate | Rhizosphere |
| 21 | 2947233263 | Pseudomonas synxantha W2I4 | Isolate | Rhizosphere |
| 22 | 3300000546 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled | Metagenome | Rhizosphere |
| 23 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 24 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 25 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 26 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 27 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 28 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 34 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 35 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 37 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 39 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 40 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 42 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 43 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 44 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 46 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 47 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 48 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 49 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 50 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 54 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 59 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 60 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300022730 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 | Metagenome | Rhizosphere |
| 62 | 3300024225 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 | Metagenome | Rhizosphere |
| 63 | 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Metagenome | Rhizosphere |
| 64 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 65 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 66 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 67 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028017 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 | Metagenome | Rhizosphere |
| 86 | 3300028023 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 | Metagenome | Rhizosphere |
| 87 | 3300028036 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 | Metagenome | Rhizosphere |
| 88 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 89 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 90 | 3300030736 | Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 | Metagenome | Rhizosphere |
| 91 | 3300030760 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 92 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 93 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 94 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 95 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 96 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 97 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 98 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 99 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 100 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 101 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 102 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 103 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 104 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 105 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 106 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 107 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 108 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 109 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 110 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 111 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 112 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 113 | 3300042128 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 | Metagenome | Rhizosphere |
| 114 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 115 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 116 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 117 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 118 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 119 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 120 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 121 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 122 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 151 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 152 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 153 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 154 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 155 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 156 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 157 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 158 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 160 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 161 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 162 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 163 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 164 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 165 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 166 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 167 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 168 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 169 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 170 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 171 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 172 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 173 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 174 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 175 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 176 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 177 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 178 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 179 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 180 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 181 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 182 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 183 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 184 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 185 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 186 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 187 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 188 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 189 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 190 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 191 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 192 | 8003955200 | Paraburkholderia mimosarum LMG 23256 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.51 |
| Metatranscriptomes | 1.46 |
| Isolates | 8.03 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.09 |
| Nodule | 1.46 |
| Rhizoplane | 2.19 |
| Rhizosphere | 87.23 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.03 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | LJNas_1000035 | 3300000546 | Bacteria | 18298 |
| 2 | JGI24739J22299_10003675 | 3300001989 | Bacteria | 5855 |
| 3 | JGI25154J39366_1000190 | 3300002738 | Bacteria | 45605 |
| 4 | JGI25165J46597_1000772 | 3300003214 | Bacteria | 24448 |
| 5 | rootH1_10039928 | 3300003316 | Bacteria | 3758 |
| 6 | rootH1_10346353 | 3300003323 | Bacteria | 1173 |
| 7 | Ga0070658_10000596 | 3300005327 | Bacteria | 31295 |
| 8 | Ga0070660_100000008 | 3300005339 | Bacteria | 155650 |
| 9 | Ga0070659_100000087 | 3300005366 | Bacteria | 69724 |
| 10 | Ga0070709_10002949 | 3300005434 | Bacteria | 9163 |
| 11 | Ga0070709_10003408 | 3300005434 | Bacteria | 8535 |
| 12 | Ga0070714_100070291 | 3300005435 | Bacteria | 3026 |
| 13 | Ga0070714_100079511 | 3300005435 | Bacteria | 2851 |
| 14 | Ga0070714_100251016 | 3300005435 | Bacteria | 1636 |
| 15 | Ga0070713_100000021 | 3300005436 | Bacteria | 107806 |
| 16 | Ga0070713_100000387 | 3300005436 | Bacteria | 28223 |
| 17 | Ga0070713_100046687 | 3300005436 | Bacteria | 3555 |
| 18 | Ga0070713_100202907 | 3300005436 | Bacteria | 1792 |
| 19 | Ga0070713_100559083 | 3300005436 | Bacteria | 1084 |
| 20 | Ga0070713_100722786 | 3300005436 | Bacteria | 952 |
| 21 | Ga0070710_10274224 | 3300005437 | Bacteria | 1092 |
| 22 | Ga0070710_10354334 | 3300005437 | Bacteria | 972 |
| 23 | Ga0070711_100000248 | 3300005439 | Bacteria | 27500 |
| 24 | Ga0070711_100002260 | 3300005439 | Bacteria | 10929 |
| 25 | Ga0070700_100929435 | 3300005441 | Bacteria | 710 |
| 26 | Ga0070708_100020705 | 3300005445 | Bacteria | 5553 |
| 27 | Ga0070708_100022228 | 3300005445 | Bacteria | 5377 |
| 28 | Ga0070706_100063564 | 3300005467 | Bacteria | 3411 |
| 29 | Ga0070706_100151958 | 3300005467 | Bacteria | 2161 |
| 30 | Ga0070698_100061979 | 3300005471 | Bacteria | 3774 |
| 31 | Ga0070699_100011485 | 3300005518 | Bacteria | 7647 |
| 32 | Ga0070699_100623766 | 3300005518 | Bacteria | 984 |
| 33 | Ga0070697_100282919 | 3300005536 | Bacteria | 1423 |
| 34 | Ga0068855_100001138 | 3300005563 | Bacteria | 32970 |
| 35 | Ga0068856_100914548 | 3300005614 | Bacteria | 896 |
| 36 | Ga0070717_10002716 | 3300006028 | Bacteria | 12485 |
| 37 | Ga0070717_10052079 | 3300006028 | Bacteria | 3371 |
| 38 | Ga0070717_10078053 | 3300006028 | Bacteria | 2774 |
| 39 | Ga0070717_10163189 | 3300006028 | Bacteria | 1934 |
| 40 | Ga0070717_10402961 | 3300006028 | Bacteria | 1229 |
| 41 | Ga0070717_10879263 | 3300006028 | Bacteria | 816 |
| 42 | Ga0070715_10036291 | 3300006163 | Bacteria | 2032 |
| 43 | Ga0070715_10206266 | 3300006163 | Bacteria | 1002 |
| 44 | Ga0070715_10232741 | 3300006163 | Bacteria | 954 |
| 45 | Ga0070716_100016402 | 3300006173 | Bacteria | 3822 |
| 46 | Ga0070716_100025589 | 3300006173 | Bacteria | 3151 |
| 47 | Ga0070716_100155928 | 3300006173 | Bacteria | 1474 |
| 48 | Ga0070716_100191340 | 3300006173 | Bacteria | 1352 |
| 49 | Ga0070712_100000509 | 3300006175 | Bacteria | 22272 |
| 50 | Ga0070712_100000556 | 3300006175 | Bacteria | 21655 |
| 51 | Ga0070712_100750947 | 3300006175 | Bacteria | 835 |
| 52 | Ga0075434_100583543 | 3300006871 | Bacteria | 1137 |
| 53 | Ga0099795_10135620 | 3300007788 | Bacteria | 997 |
| 54 | Ga0105250_10000325 | 3300009092 | Bacteria | 36727 |
| 55 | Ga0105240_10000245 | 3300009093 | Bacteria | 107565 |
| 56 | Ga0105237_10015036 | 3300009545 | Bacteria | 8065 |
| 57 | Ga0099796_10045359 | 3300010159 | Bacteria | 1505 |
| 58 | Ga0105246_10000151 | 3300011119 | Bacteria | 32865 |
| 59 | Ga0157373_10006376 | 3300013100 | Bacteria | 8812 |
| 60 | Ga0157370_10000485 | 3300013104 | Bacteria | 49509 |
| 61 | Ga0157370_10006969 | 3300013104 | Bacteria | 12343 |
| 62 | Ga0157370_10011558 | 3300013104 | Bacteria | 9216 |
| 63 | Ga0157370_10093946 | 3300013104 | Bacteria | 2814 |
| 64 | Ga0157370_10117820 | 3300013104 | Bacteria | 2481 |
| 65 | Ga0157369_10004954 | 3300013105 | Bacteria | 15599 |
| 66 | Ga0182006_1098474 | 3300015261 | Bacteria | 1041 |
| 67 | Ga0182007_10014115 | 3300015262 | Bacteria | 3024 |
| 68 | Ga0163161_10012847 | 3300017792 | Bacteria | 5817 |
| 69 | Ga0163161_10043240 | 3300017792 | Bacteria | 3243 |
| 70 | Ga0163161_10082288 | 3300017792 | Bacteria | 2372 |
| 71 | Ga0224570_100172 | 3300022730 | Bacteria | 4444 |
| 72 | Ga0224572_1015399 | 3300024225 | Bacteria | 1464 |
| 73 | Ga0224572_1028427 | 3300024225 | Bacteria | 1071 |
| 74 | Ga0228598_1007115 | 3300024227 | Bacteria | 2292 |
| 75 | Ga0228598_1051819 | 3300024227 | Bacteria | 814 |
| 76 | Ga0209646_1000075 | 3300025246 | Bacteria | 221755 |
| 77 | Ga0209026_1000902 | 3300025250 | Bacteria | 15282 |
| 78 | Ga0209759_1001056 | 3300025256 | Bacteria | 18140 |
| 79 | Ga0209759_1004116 | 3300025256 | Bacteria | 5551 |
| 80 | Ga0209233_1000016 | 3300025261 | Bacteria | 907830 |
| 81 | Ga0207696_1000386 | 3300025711 | Bacteria | 42561 |
| 82 | Ga0207692_10022743 | 3300025898 | Bacteria | 2889 |
| 83 | Ga0207685_10031429 | 3300025905 | Bacteria | 1901 |
| 84 | Ga0207699_10008043 | 3300025906 | Bacteria | 5181 |
| 85 | Ga0207699_10010787 | 3300025906 | Bacteria | 4597 |
| 86 | Ga0207699_10221336 | 3300025906 | Bacteria | 1292 |
| 87 | Ga0207705_10000344 | 3300025909 | Bacteria | 41940 |
| 88 | Ga0207684_10073602 | 3300025910 | Bacteria | 2902 |
| 89 | Ga0207695_10000350 | 3300025913 | Bacteria | 106451 |
| 90 | Ga0207671_10350132 | 3300025914 | Bacteria | 1171 |
| 91 | Ga0207693_10000047 | 3300025915 | Bacteria | 100876 |
| 92 | Ga0207693_10000050 | 3300025915 | Bacteria | 100076 |
| 93 | Ga0207663_10000679 | 3300025916 | Bacteria | 15066 |
| 94 | Ga0207657_10000018 | 3300025919 | Bacteria | 172140 |
| 95 | Ga0207694_10007147 | 3300025924 | Bacteria | 8486 |
| 96 | Ga0207700_10000069 | 3300025928 | Bacteria | 63176 |
| 97 | Ga0207700_10000828 | 3300025928 | Bacteria | 17894 |
| 98 | Ga0207700_10153845 | 3300025928 | Bacteria | 1903 |
| 99 | Ga0207700_10206953 | 3300025928 | Bacteria | 1656 |
| 100 | Ga0207700_10492962 | 3300025928 | Bacteria | 1084 |
| 101 | Ga0207700_10970742 | 3300025928 | Unclassified | 760 |
| 102 | Ga0207664_10000483 | 3300025929 | Bacteria | 28328 |
| 103 | Ga0207664_10009056 | 3300025929 | Bacteria | 6972 |
| 104 | Ga0207664_10141520 | 3300025929 | Bacteria | 2035 |
| 105 | Ga0207664_10164850 | 3300025929 | Bacteria | 1892 |
| 106 | Ga0207664_10262394 | 3300025929 | Bacteria | 1511 |
| 107 | Ga0207664_10294740 | 3300025929 | Bacteria | 1426 |
| 108 | Ga0207690_10000006 | 3300025932 | Bacteria | 433880 |
| 109 | Ga0207665_10004295 | 3300025939 | Bacteria | 9474 |
| 110 | Ga0207665_10026095 | 3300025939 | Bacteria | 3855 |
| 111 | Ga0207665_10049893 | 3300025939 | Bacteria | 2814 |
| 112 | Ga0207667_10000427 | 3300025949 | Bacteria | 56780 |
| 113 | Ga0265356_1000608 | 3300028017 | Bacteria | 6267 |
| 114 | Ga0265356_1003725 | 3300028017 | Bacteria | 1901 |
| 115 | Ga0265357_1030123 | 3300028023 | Bacteria | 618 |
| 116 | Ga0265355_1003885 | 3300028036 | Bacteria | 1112 |
| 117 | Ga0265338_10002238 | 3300028800 | Bacteria | 29484 |
| 118 | Ga0265338_10024605 | 3300028800 | Bacteria | 6145 |
| 119 | Ga0265338_10233217 | 3300028800 | Bacteria | 1367 |
| 120 | Ga0316177_1150249 | 3300030731 | Bacteria | 4821 |
| 121 | Ga0316177_1195886 | 3300030731 | Bacteria | 1566 |
| 122 | Ga0316180_1183833 | 3300030736 | Bacteria | 1691 |
| 123 | Ga0265762_1000028 | 3300030760 | Bacteria | 16236 |
| 124 | Ga0265762_1000378 | 3300030760 | Bacteria | 7635 |
| 125 | Ga0265762_1003045 | 3300030760 | Bacteria | 2997 |
| 126 | Ga0265760_10003584 | 3300031090 | Bacteria | 4505 |
| 127 | Ga0265339_10158646 | 3300031249 | Bacteria | 1139 |
| 128 | Ga0265316_10020186 | 3300031344 | Bacteria | 5677 |
| 129 | Ga0265316_10033629 | 3300031344 | Bacteria | 4173 |
| 130 | Ga0307408_100211235 | 3300031548 | Bacteria | 1577 |
| 131 | Ga0316576_10123738 | 3300031727 | Bacteria | 1943 |
| 132 | Ga0307416_100306414 | 3300032002 | Bacteria | 1582 |
| 133 | Ga0307416_100497464 | 3300032002 | Bacteria | 1283 |
| 134 | Ga0307414_10215277 | 3300032004 | Bacteria | 1573 |
| 135 | Ga0373926_0121732 | 3300035083 | Unclassified | 984 |
| 136 | Ga0373944_0040803 | 3300035089 | Bacteria | 1434 |
| 137 | Ga0373954_0049931 | 3300035118 | Bacteria | 1962 |
| 138 | Ga0373956_0009018 | 3300035119 | Bacteria | 4044 |
| 139 | Ga0373943_0032623 | 3300035170 | Bacteria | 2476 |
| 140 | Ga0373955_0593904 | 3300035172 | Bacteria | 678 |
| 141 | Ga0373942_0010307 | 3300035207 | Bacteria | 2198 |
| 142 | Ga0373924_0236743 | 3300035410 | Bacteria | 807 |
| 143 | Ga0373935_0346427 | 3300035692 | Bacteria | 1058 |
| 144 | Ga0373935_0783465 | 3300035692 | Bacteria | 703 |
| 145 | Ga0373947_0054784 | 3300035725 | Bacteria | 2407 |
| 146 | Ga0373947_0622681 | 3300035725 | Bacteria | 736 |
| 147 | Ga0373937_0228061 | 3300036401 | Bacteria | 1754 |
| 148 | Ga0373937_0231215 | 3300036401 | Bacteria | 1741 |
| 149 | Ga0373937_1253568 | 3300036401 | Bacteria | 690 |
| 150 | Ga0373925_0021594 | 3300037068 | Bacteria | 4692 |
| 151 | Ga0373925_0117227 | 3300037068 | Bacteria | 2063 |
| 152 | Ga0395899_0000166 | 3300037312 | Bacteria | 101803 |
| 153 | Ga0436363_0087096 | 3300039450 | Unclassified | 785 |
| 154 | Ga0450897_003281 | 3300042128 | Bacteria | 1288 |
| 155 | Ga0450894_011103 | 3300042131 | Bacteria | 1171 |
| 156 | Ga0450898_004608 | 3300042134 | Bacteria | 2045 |
| 157 | Ga0466969_0324171 | 3300044656 | Bacteria | 697 |
| 158 | Ga0466972_0007393 | 3300044658 | Bacteria | 5519 |
| 159 | Ga0466966_0045153 | 3300044684 | Bacteria | 2818 |
| 160 | Ga0466966_0781905 | 3300044684 | Bacteria | 575 |
| 161 | Ga0466964_0000398 | 3300044706 | Bacteria | 13217 |
| 162 | Ga0466968_0023079 | 3300044735 | Bacteria | 2532 |
| 163 | Ga0466959_0154961 | 3300045049 | Bacteria | 1613 |
| 164 | Ga0495629_0000078 | 3300046459 | Bacteria | 85705 |
| 165 | Ga0495629_0001766 | 3300046459 | Bacteria | 16951 |
| 166 | Ga0495629_0016890 | 3300046459 | Bacteria | 5238 |
| 167 | Ga0495641_0042995 | 3300046461 | Bacteria | 2091 |
| 168 | Ga0495653_0000333 | 3300046463 | Bacteria | 38588 |
| 169 | Ga0495653_0020029 | 3300046463 | Bacteria | 5421 |
| 170 | Ga0495650_0006037 | 3300046471 | Bacteria | 7656 |
| 171 | Ga0495580_0000503 | 3300046472 | Bacteria | 32847 |
| 172 | Ga0495580_0001193 | 3300046472 | Bacteria | 22854 |
| 173 | Ga0495580_0073602 | 3300046472 | Bacteria | 2385 |
| 174 | Ga0495580_0188577 | 3300046472 | Bacteria | 1422 |
| 175 | Ga0495580_0533819 | 3300046472 | Bacteria | 780 |
| 176 | Ga0495582_0007712 | 3300046473 | Bacteria | 5950 |
| 177 | Ga0495582_0012909 | 3300046473 | Bacteria | 4602 |
| 178 | Ga0495582_0090568 | 3300046473 | Bacteria | 1705 |
| 179 | Ga0495605_0014219 | 3300046474 | Bacteria | 4365 |
| 180 | Ga0495605_0075733 | 3300046474 | Bacteria | 1582 |
| 181 | Ga0495662_0006454 | 3300046476 | Bacteria | 5856 |
| 182 | Ga0495664_0319537 | 3300046477 | Bacteria | 936 |
| 183 | Ga0495584_0278741 | 3300046491 | Bacteria | 849 |
| 184 | Ga0495585_0000606 | 3300046492 | Bacteria | 33581 |
| 185 | Ga0495594_0031643 | 3300046499 | Bacteria | 2869 |
| 186 | Ga0495594_0039321 | 3300046499 | Bacteria | 2587 |
| 187 | Ga0495596_0005578 | 3300046500 | Bacteria | 5914 |
| 188 | Ga0495596_0081806 | 3300046500 | Bacteria | 1253 |
| 189 | Ga0495583_0006531 | 3300046506 | Bacteria | 7604 |
| 190 | Ga0495606_0172785 | 3300046507 | Bacteria | 1252 |
| 191 | Ga0495608_0296338 | 3300046511 | Bacteria | 1002 |
| 192 | Ga0495630_0039062 | 3300046517 | Bacteria | 3550 |
| 193 | Ga0495631_0033931 | 3300046518 | Bacteria | 2289 |
| 194 | Ga0495643_0019570 | 3300046522 | Bacteria | 3914 |
| 195 | Ga0495644_0178785 | 3300046523 | Bacteria | 815 |
| 196 | Ga0495665_0039951 | 3300046531 | Bacteria | 2498 |
| 197 | Ga0495665_0187284 | 3300046531 | Bacteria | 1074 |
| 198 | Ga0495665_0324669 | 3300046531 | Bacteria | 786 |
| 199 | Ga0495609_0001369 | 3300046538 | Bacteria | 16368 |
| 200 | Ga0495597_0125351 | 3300046542 | Bacteria | 1068 |
| 201 | Ga0495622_0178327 | 3300046557 | Bacteria | 953 |
| 202 | Ga0495633_0330348 | 3300046558 | Bacteria | 691 |
| 203 | Ga0495668_0025981 | 3300046616 | Bacteria | 3325 |
| 204 | Ga0495634_0305777 | 3300046642 | Bacteria | 960 |
| 205 | Ga0495611_0008185 | 3300046648 | Bacteria | 4435 |
| 206 | Ga0495625_0425452 | 3300046660 | Bacteria | 825 |
| 207 | Ga0495635_0075105 | 3300046663 | Bacteria | 2315 |
| 208 | Ga0495657_0285882 | 3300046675 | Bacteria | 986 |
| 209 | Ga0495646_0156150 | 3300046680 | Bacteria | 1266 |
| 210 | Ga0495647_0010516 | 3300046681 | Bacteria | 3152 |
| 211 | Ga0495658_0068680 | 3300046683 | Bacteria | 2052 |
| 212 | Ga0495613_0003662 | 3300046689 | Bacteria | 11518 |
| 213 | Ga0495613_0234596 | 3300046689 | Bacteria | 1284 |
| 214 | Ga0495624_0000318 | 3300046690 | Bacteria | 38361 |
| 215 | Ga0495624_0597050 | 3300046690 | Bacteria | 658 |
| 216 | Ga0495649_0011130 | 3300046694 | Bacteria | 5293 |
| 217 | Ga0495589_0115924 | 3300046794 | Bacteria | 1291 |
| 218 | Ga0495600_0092955 | 3300046809 | Bacteria | 1967 |
| 219 | Ga0495581_0079670 | 3300047315 | Bacteria | 1895 |
| 220 | Ga0495604_0354752 | 3300047317 | Bacteria | 974 |
| 221 | Ga0495636_0118736 | 3300047318 | Bacteria | 1168 |
| 222 | Ga0495674_0001440 | 3300047319 | Bacteria | 23323 |
| 223 | Ga0495674_0110088 | 3300047319 | Bacteria | 2336 |
| 224 | Ga0495672_0228098 | 3300047320 | Unclassified | 915 |
| 225 | Ga0495676_0030157 | 3300047321 | Bacteria | 4609 |
| 226 | Ga0495680_0140113 | 3300047322 | Bacteria | 1770 |
| 227 | Ga0495683_0012000 | 3300047323 | Bacteria | 4553 |
| 228 | Ga0495687_012594 | 3300047443 | Bacteria | 4461 |
| 229 | Ga0495677_0021175 | 3300047445 | Bacteria | 2357 |
| 230 | Ga0495684_0019943 | 3300047471 | Bacteria | 5165 |
| 231 | Ga0495593_0047605 | 3300047673 | Bacteria | 2280 |
| 232 | Ga0495602_0052293 | 3300048088 | Bacteria | 3630 |
| 233 | Ga0495614_0157116 | 3300048089 | Bacteria | 1016 |
| 234 | Ga0495626_0073748 | 3300048091 | Bacteria | 1528 |
| 235 | Ga0496100_0272619 | 3300048903 | Bacteria | 1259 |
| 236 | Ga0496105_0482081 | 3300048908 | Bacteria | 976 |
| 237 | Ga0496115_0003383 | 3300048918 | Bacteria | 11447 |
| 238 | Ga0496116_0047114 | 3300048919 | Bacteria | 2904 |
| 239 | Ga0496117_0009546 | 3300048920 | Bacteria | 9004 |
| 240 | Ga0496118_0029332 | 3300048921 | Bacteria | 4615 |
| 241 | Ga0496118_0030938 | 3300048921 | Bacteria | 4452 |
| 242 | Ga0496121_0186863 | 3300048924 | Bacteria | 1489 |
| 243 | Ga0496121_0552908 | 3300048924 | Unclassified | 720 |
| 244 | Ga0496122_0154461 | 3300048925 | Bacteria | 1410 |
| 245 | Ga0496124_0145976 | 3300048927 | Bacteria | 1861 |
| 246 | Ga0496125_0025080 | 3300048928 | Bacteria | 5470 |
| 247 | Ga0496126_0029998 | 3300048929 | Bacteria | 5160 |
| 248 | Ga0501039_0073179 | 3300049575 | Bacteria | 2663 |
| 249 | Ga0501067_0107068 | 3300049583 | Bacteria | 1554 |
| 250 | Ga0501072_0089608 | 3300049588 | Bacteria | 2442 |
| 251 | Ga0500573_0421785 | 3300053140 | Bacteria | 625 |
| 252 | Ga0501084_0709176 | 3300054114 | Bacteria | 848 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300006163 | Ga0070715_10206266 | Ga0070715_102062662 | 154 |
| 2 | 3300013104 | Ga0157370_10011558 | Ga0157370_100115582 | 170 |
| 3 | 3300031727 | Ga0316576_10123738 | Ga0316576_101237382 | 170 |
| 4 | iso_pu_bacteria | 2881955468 | 2881958408 | 171 |
| 5 | 3300044684 | Ga0466966_0781905 | Ga0466966_0781905_27_551 | 173 |
| 6 | 3300032004 | Ga0307414_10215277 | Ga0307414_102152772 | 176 |
| 7 | iso_pu_bacteria | 2773857673 | 2774134574 | 176 |
| 8 | iso_pu_bacteria | 2849660919 | 2849664583 | 176 |
| 9 | iso_pu_bacteria | 2860867994 | 2860868294 | 176 |
| 10 | iso_pu_bacteria | 2904518522 | 2904519426 | 176 |
| 11 | iso_pu_bacteria | 2929189879 | 2929190155 | 176 |
| 12 | iso_pu_bacteria | 2946027586 | 2946028495 | 176 |
| 13 | iso_pu_bacteria | 2947233263 | 2947234993 | 176 |
| 14 | iso_pu_bacteria | 2600255067 | 2600810547 | 177 |
| 15 | iso_pu_bacteria | 2856287931 | 2856288709 | 177 |
| 16 | iso_pu_bacteria | 2857357740 | 2857362092 | 177 |
| 17 | 3300017792 | Ga0163161_10012847 | Ga0163161_100128474 | 178 |
| 18 | iso_pu_bacteria | 2510065045 | 2510250089 | 178 |
| 19 | iso_pu_bacteria | 2513237083 | 2513565500 | 178 |
| 20 | iso_pu_bacteria | 2513237165 | 2514041144 | 178 |
| 21 | iso_pu_bacteria | 2599185240 | 2599748174 | 178 |
| 22 | iso_pu_bacteria | 2599185355 | 2600210142 | 178 |
| 23 | iso_pu_bacteria | 2675903129 | 2676746501 | 178 |
| 24 | iso_pu_bacteria | 2808606384 | 2808972196 | 178 |
| 25 | iso_pu_bacteria | 2808606390 | 2809006886 | 178 |
| 26 | iso_pu_bacteria | 2808606391 | 2809014024 | 178 |
| 27 | iso_pu_bacteria | 2816332286 | 2817455877 | 178 |
| 28 | iso_pu_bacteria | 8003955200 | 8003961921 | 178 |
| 29 | 3300005467 | Ga0070706_100151958 | Ga0070706_1001519583 | 179 |
| 30 | 3300005471 | Ga0070698_100061979 | Ga0070698_1000619793 | 179 |
| 31 | 3300025910 | Ga0207684_10073602 | Ga0207684_100736023 | 179 |
| 32 | 3300003323 | rootH1_10346353 | rootH1_103463532 | 180 |
| 33 | 3300005436 | Ga0070713_100046687 | Ga0070713_1000466873 | 180 |
| 34 | 3300005436 | Ga0070713_100202907 | Ga0070713_1002029073 | 180 |
| 35 | 3300005441 | Ga0070700_100929435 | Ga0070700_1009294351 | 180 |
| 36 | 3300006163 | Ga0070715_10232741 | Ga0070715_102327412 | 180 |
| 37 | 3300006173 | Ga0070716_100155928 | Ga0070716_1001559282 | 180 |
| 38 | 3300006173 | Ga0070716_100191340 | Ga0070716_1001913402 | 180 |
| 39 | 3300006871 | Ga0075434_100583543 | Ga0075434_1005835432 | 180 |
| 40 | 3300009092 | Ga0105250_10000325 | Ga0105250_1000032537 | 180 |
| 41 | 3300011119 | Ga0105246_10000151 | Ga0105246_1000015119 | 180 |
| 42 | 3300013100 | Ga0157373_10006376 | Ga0157373_100063764 | 180 |
| 43 | 3300013104 | Ga0157370_10006969 | Ga0157370_1000696914 | 180 |
| 44 | 3300013104 | Ga0157370_10093946 | Ga0157370_100939462 | 180 |
| 45 | 3300017792 | Ga0163161_10043240 | Ga0163161_100432402 | 180 |
| 46 | 3300017792 | Ga0163161_10082288 | Ga0163161_100822882 | 180 |
| 47 | 3300025711 | Ga0207696_1000386 | Ga0207696_100038638 | 180 |
| 48 | 3300025906 | Ga0207699_10010787 | Ga0207699_100107873 | 180 |
| 49 | 3300025928 | Ga0207700_10153845 | Ga0207700_101538452 | 180 |
| 50 | 3300025928 | Ga0207700_10206953 | Ga0207700_102069532 | 180 |
| 51 | 3300025929 | Ga0207664_10141520 | Ga0207664_101415202 | 180 |
| 52 | 3300025929 | Ga0207664_10294740 | Ga0207664_102947402 | 180 |
| 53 | 3300025939 | Ga0207665_10049893 | Ga0207665_100498934 | 180 |
| 54 | 3300030731 | Ga0316177_1150249 | Ga0316177_11502493 | 180 |
| 55 | 3300030731 | Ga0316177_1195886 | Ga0316177_11958862 | 180 |
| 56 | 3300030736 | Ga0316180_1183833 | Ga0316180_11838333 | 180 |
| 57 | 3300031548 | Ga0307408_100211235 | Ga0307408_1002112352 | 180 |
| 58 | 3300032002 | Ga0307416_100306414 | Ga0307416_1003064142 | 180 |
| 59 | 3300032002 | Ga0307416_100497464 | Ga0307416_1004974641 | 180 |
| 60 | 3300035118 | Ga0373954_0049931 | Ga0373954_0049931_22_564 | 180 |
| 61 | 3300035170 | Ga0373943_0032623 | Ga0373943_0032623_1663_2205 | 180 |
| 62 | 3300035207 | Ga0373942_0010307 | Ga0373942_0010307_839_1384 | 180 |
| 63 | 3300035692 | Ga0373935_0783465 | Ga0373935_0783465_68_610 | 180 |
| 64 | 3300035725 | Ga0373947_0054784 | Ga0373947_0054784_1197_1739 | 180 |
| 65 | 3300036401 | Ga0373937_0231215 | Ga0373937_0231215_1082_1624 | 180 |
| 66 | 3300037068 | Ga0373925_0117227 | Ga0373925_0117227_872_1414 | 180 |
| 67 | 3300037312 | Ga0395899_0000166 | Ga0395899_0000166_67143_67688 | 180 |
| 68 | 3300039450 | Ga0436363_0087096 | Ga0436363_0087096_231_773 | 180 |
| 69 | 3300042128 | Ga0450897_003281 | Ga0450897_003281_417_962 | 180 |
| 70 | 3300042131 | Ga0450894_011103 | Ga0450894_011103_302_847 | 180 |
| 71 | 3300042134 | Ga0450898_004608 | Ga0450898_004608_873_1418 | 180 |
| 72 | 3300046459 | Ga0495629_0016890 | Ga0495629_0016890_4667_5209 | 180 |
| 73 | 3300046472 | Ga0495580_0073602 | Ga0495580_0073602_782_1324 | 180 |
| 74 | 3300046473 | Ga0495582_0007712 | Ga0495582_0007712_850_1392 | 180 |
| 75 | 3300046474 | Ga0495605_0014219 | Ga0495605_0014219_179_724 | 180 |
| 76 | 3300046476 | Ga0495662_0006454 | Ga0495662_0006454_4947_5489 | 180 |
| 77 | 3300046491 | Ga0495584_0278741 | Ga0495584_0278741_143_688 | 180 |
| 78 | 3300046492 | Ga0495585_0000606 | Ga0495585_0000606_27600_28145 | 180 |
| 79 | 3300046499 | Ga0495594_0039321 | Ga0495594_0039321_186_731 | 180 |
| 80 | 3300046500 | Ga0495596_0005578 | Ga0495596_0005578_4906_5451 | 180 |
| 81 | 3300046500 | Ga0495596_0081806 | Ga0495596_0081806_487_1032 | 180 |
| 82 | 3300046517 | Ga0495630_0039062 | Ga0495630_0039062_339_881 | 180 |
| 83 | 3300046518 | Ga0495631_0033931 | Ga0495631_0033931_1115_1660 | 180 |
| 84 | 3300046522 | Ga0495643_0019570 | Ga0495643_0019570_178_723 | 180 |
| 85 | 3300046523 | Ga0495644_0178785 | Ga0495644_0178785_206_751 | 180 |
| 86 | 3300046531 | Ga0495665_0039951 | Ga0495665_0039951_153_695 | 180 |
| 87 | 3300046538 | Ga0495609_0001369 | Ga0495609_0001369_15658_16203 | 180 |
| 88 | 3300046557 | Ga0495622_0178327 | Ga0495622_0178327_317_862 | 180 |
| 89 | 3300046558 | Ga0495633_0330348 | Ga0495633_0330348_10_555 | 180 |
| 90 | 3300046616 | Ga0495668_0025981 | Ga0495668_0025981_1547_2092 | 180 |
| 91 | 3300046642 | Ga0495634_0305777 | Ga0495634_0305777_369_911 | 180 |
| 92 | 3300046648 | Ga0495611_0008185 | Ga0495611_0008185_2446_2991 | 180 |
| 93 | 3300046660 | Ga0495625_0425452 | Ga0495625_0425452_56_601 | 180 |
| 94 | 3300046663 | Ga0495635_0075105 | Ga0495635_0075105_849_1391 | 180 |
| 95 | 3300046681 | Ga0495647_0010516 | Ga0495647_0010516_1686_2228 | 180 |
| 96 | 3300046683 | Ga0495658_0068680 | Ga0495658_0068680_720_1262 | 180 |
| 97 | 3300046689 | Ga0495613_0003662 | Ga0495613_0003662_6312_6854 | 180 |
| 98 | 3300046794 | Ga0495589_0115924 | Ga0495589_0115924_679_1224 | 180 |
| 99 | 3300046809 | Ga0495600_0092955 | Ga0495600_0092955_555_1097 | 180 |
| 100 | 3300047315 | Ga0495581_0079670 | Ga0495581_0079670_1324_1866 | 180 |
| 101 | 3300047318 | Ga0495636_0118736 | Ga0495636_0118736_51_596 | 180 |
| 102 | 3300047320 | Ga0495672_0228098 | Ga0495672_0228098_329_874 | 180 |
| 103 | 3300047322 | Ga0495680_0140113 | Ga0495680_0140113_924_1466 | 180 |
| 104 | 3300047445 | Ga0495677_0021175 | Ga0495677_0021175_22_567 | 180 |
| 105 | 3300047471 | Ga0495684_0019943 | Ga0495684_0019943_3261_3803 | 180 |
| 106 | 3300048089 | Ga0495614_0157116 | Ga0495614_0157116_285_827 | 180 |
| 107 | 3300048091 | Ga0495626_0073748 | Ga0495626_0073748_307_852 | 180 |
| 108 | 3300048920 | Ga0496117_0009546 | Ga0496117_0009546_2691_3236 | 180 |
| 109 | 3300048921 | Ga0496118_0029332 | Ga0496118_0029332_2156_2701 | 180 |
| 110 | 3300048921 | Ga0496118_0030938 | Ga0496118_0030938_1915_2460 | 180 |
| 111 | 3300048924 | Ga0496121_0186863 | Ga0496121_0186863_835_1380 | 180 |
| 112 | 3300048925 | Ga0496122_0154461 | Ga0496122_0154461_733_1278 | 180 |
| 113 | 3300048927 | Ga0496124_0145976 | Ga0496124_0145976_1168_1713 | 180 |
| 114 | 3300048928 | Ga0496125_0025080 | Ga0496125_0025080_760_1305 | 180 |
| 115 | 3300048929 | Ga0496126_0029998 | Ga0496126_0029998_1769_2314 | 180 |
| 116 | 3300049575 | Ga0501039_0073179 | Ga0501039_0073179_746_1291 | 180 |
| 117 | 3300049583 | Ga0501067_0107068 | Ga0501067_0107068_468_1010 | 180 |
| 118 | 3300049588 | Ga0501072_0089608 | Ga0501072_0089608_26_571 | 180 |
| 119 | 3300053140 | Ga0500573_0421785 | Ga0500573_0421785_64_615 | 180 |
| 120 | 3300054114 | Ga0501084_0709176 | Ga0501084_0709176_53_598 | 180 |
| 121 | 3300001989 | JGI24739J22299_10003675 | JGI24739J22299_100036752 | 182 |
| 122 | 3300002738 | JGI25154J39366_1000190 | JGI25154J39366_100019037 | 182 |
| 123 | 3300003214 | JGI25165J46597_1000772 | JGI25165J46597_10007728 | 182 |
| 124 | 3300003316 | rootH1_10039928 | rootH1_100399284 | 182 |
| 125 | 3300005327 | Ga0070658_10000596 | Ga0070658_100005964 | 182 |
| 126 | 3300005339 | Ga0070660_100000008 | Ga0070660_10000000868 | 182 |
| 127 | 3300005366 | Ga0070659_100000087 | Ga0070659_1000000877 | 182 |
| 128 | 3300005563 | Ga0068855_100001138 | Ga0068855_10000113826 | 182 |
| 129 | 3300005614 | Ga0068856_100914548 | Ga0068856_1009145482 | 182 |
| 130 | 3300009545 | Ga0105237_10015036 | Ga0105237_100150363 | 182 |
| 131 | 3300013104 | Ga0157370_10000485 | Ga0157370_1000048511 | 182 |
| 132 | 3300013104 | Ga0157370_10117820 | Ga0157370_101178203 | 182 |
| 133 | 3300013105 | Ga0157369_10004954 | Ga0157369_1000495412 | 182 |
| 134 | 3300015261 | Ga0182006_1098474 | Ga0182006_10984742 | 182 |
| 135 | 3300015262 | Ga0182007_10014115 | Ga0182007_100141155 | 182 |
| 136 | 3300025246 | Ga0209646_1000075 | Ga0209646_100007550 | 182 |
| 137 | 3300025250 | Ga0209026_1000902 | Ga0209026_10009024 | 182 |
| 138 | 3300025256 | Ga0209759_1001056 | Ga0209759_10010562 | 182 |
| 139 | 3300025256 | Ga0209759_1004116 | Ga0209759_10041164 | 182 |
| 140 | 3300025261 | Ga0209233_1000016 | Ga0209233_1000016601 | 182 |
| 141 | 3300025909 | Ga0207705_10000344 | Ga0207705_1000034412 | 182 |
| 142 | 3300025914 | Ga0207671_10350132 | Ga0207671_103501322 | 182 |
| 143 | 3300025919 | Ga0207657_10000018 | Ga0207657_1000001816 | 182 |
| 144 | 3300025924 | Ga0207694_10007147 | Ga0207694_100071477 | 182 |
| 145 | 3300025932 | Ga0207690_10000006 | Ga0207690_1000000668 | 182 |
| 146 | 3300025949 | Ga0207667_10000427 | Ga0207667_1000042733 | 182 |
| 147 | 3300044656 | Ga0466969_0324171 | Ga0466969_0324171_45_596 | 182 |
| 148 | 3300044658 | Ga0466972_0007393 | Ga0466972_0007393_3144_3695 | 182 |
| 149 | 3300044684 | Ga0466966_0045153 | Ga0466966_0045153_1538_2089 | 182 |
| 150 | 3300044706 | Ga0466964_0000398 | Ga0466964_0000398_2180_2731 | 182 |
| 151 | 3300044735 | Ga0466968_0023079 | Ga0466968_0023079_402_953 | 182 |
| 152 | 3300045049 | Ga0466959_0154961 | Ga0466959_0154961_651_1202 | 182 |
| 153 | 3300046459 | Ga0495629_0000078 | Ga0495629_0000078_83811_84362 | 182 |
| 154 | 3300046463 | Ga0495653_0000333 | Ga0495653_0000333_37469_38020 | 182 |
| 155 | 3300046463 | Ga0495653_0020029 | Ga0495653_0020029_1391_1942 | 182 |
| 156 | 3300046471 | Ga0495650_0006037 | Ga0495650_0006037_1959_2510 | 182 |
| 157 | 3300046472 | Ga0495580_0000503 | Ga0495580_0000503_1389_1940 | 182 |
| 158 | 3300046472 | Ga0495580_0533819 | Ga0495580_0533819_59_610 | 182 |
| 159 | 3300046473 | Ga0495582_0090568 | Ga0495582_0090568_218_769 | 182 |
| 160 | 3300046474 | Ga0495605_0075733 | Ga0495605_0075733_497_1048 | 182 |
| 161 | 3300046499 | Ga0495594_0031643 | Ga0495594_0031643_2102_2659 | 182 |
| 162 | 3300046506 | Ga0495583_0006531 | Ga0495583_0006531_2063_2614 | 182 |
| 163 | 3300046507 | Ga0495606_0172785 | Ga0495606_0172785_87_638 | 182 |
| 164 | 3300046531 | Ga0495665_0187284 | Ga0495665_0187284_450_1001 | 182 |
| 165 | 3300046542 | Ga0495597_0125351 | Ga0495597_0125351_126_677 | 182 |
| 166 | 3300046680 | Ga0495646_0156150 | Ga0495646_0156150_445_996 | 182 |
| 167 | 3300046689 | Ga0495613_0234596 | Ga0495613_0234596_208_759 | 182 |
| 168 | 3300046690 | Ga0495624_0000318 | Ga0495624_0000318_1312_1863 | 182 |
| 169 | 3300046694 | Ga0495649_0011130 | Ga0495649_0011130_941_1492 | 182 |
| 170 | 3300047319 | Ga0495674_0001440 | Ga0495674_0001440_17001_17552 | 182 |
| 171 | 3300047321 | Ga0495676_0030157 | Ga0495676_0030157_3677_4228 | 182 |
| 172 | 3300047323 | Ga0495683_0012000 | Ga0495683_0012000_3892_4443 | 182 |
| 173 | 3300047443 | Ga0495687_012594 | Ga0495687_012594_1636_2187 | 182 |
| 174 | 3300047673 | Ga0495593_0047605 | Ga0495593_0047605_455_1006 | 182 |
| 175 | 3300048924 | Ga0496121_0552908 | Ga0496121_0552908_67_618 | 182 |
| 176 | 3300000546 | LJNas_1000035 | LJNas_100003514 | 183 |
| 177 | 3300005434 | Ga0070709_10002949 | Ga0070709_100029499 | 183 |
| 178 | 3300005434 | Ga0070709_10003408 | Ga0070709_100034083 | 183 |
| 179 | 3300005435 | Ga0070714_100070291 | Ga0070714_1000702912 | 183 |
| 180 | 3300005435 | Ga0070714_100079511 | Ga0070714_1000795112 | 183 |
| 181 | 3300005435 | Ga0070714_100251016 | Ga0070714_1002510162 | 183 |
| 182 | 3300005436 | Ga0070713_100000021 | Ga0070713_10000002181 | 183 |
| 183 | 3300005436 | Ga0070713_100000387 | Ga0070713_1000003878 | 183 |
| 184 | 3300005436 | Ga0070713_100559083 | Ga0070713_1005590831 | 183 |
| 185 | 3300005436 | Ga0070713_100722786 | Ga0070713_1007227862 | 183 |
| 186 | 3300005437 | Ga0070710_10274224 | Ga0070710_102742241 | 183 |
| 187 | 3300005437 | Ga0070710_10354334 | Ga0070710_103543342 | 183 |
| 188 | 3300005439 | Ga0070711_100000248 | Ga0070711_10000024814 | 183 |
| 189 | 3300005439 | Ga0070711_100002260 | Ga0070711_1000022609 | 183 |
| 190 | 3300005445 | Ga0070708_100020705 | Ga0070708_1000207056 | 183 |
| 191 | 3300005445 | Ga0070708_100022228 | Ga0070708_1000222285 | 183 |
| 192 | 3300005467 | Ga0070706_100063564 | Ga0070706_1000635644 | 183 |
| 193 | 3300005518 | Ga0070699_100011485 | Ga0070699_1000114856 | 183 |
| 194 | 3300005518 | Ga0070699_100623766 | Ga0070699_1006237662 | 183 |
| 195 | 3300005536 | Ga0070697_100282919 | Ga0070697_1002829192 | 183 |
| 196 | 3300006028 | Ga0070717_10002716 | Ga0070717_100027168 | 183 |
| 197 | 3300006028 | Ga0070717_10052079 | Ga0070717_100520794 | 183 |
| 198 | 3300006028 | Ga0070717_10078053 | Ga0070717_100780533 | 183 |
| 199 | 3300006028 | Ga0070717_10163189 | Ga0070717_101631892 | 183 |
| 200 | 3300006028 | Ga0070717_10402961 | Ga0070717_104029612 | 183 |
| 201 | 3300006028 | Ga0070717_10879263 | Ga0070717_108792632 | 183 |
| 202 | 3300006163 | Ga0070715_10036291 | Ga0070715_100362912 | 183 |
| 203 | 3300006173 | Ga0070716_100016402 | Ga0070716_1000164023 | 183 |
| 204 | 3300006173 | Ga0070716_100025589 | Ga0070716_1000255893 | 183 |
| 205 | 3300006175 | Ga0070712_100000509 | Ga0070712_1000005093 | 183 |
| 206 | 3300006175 | Ga0070712_100000556 | Ga0070712_1000005563 | 183 |
| 207 | 3300006175 | Ga0070712_100750947 | Ga0070712_1007509472 | 183 |
| 208 | 3300007788 | Ga0099795_10135620 | Ga0099795_101356202 | 183 |
| 209 | 3300009093 | Ga0105240_10000245 | Ga0105240_1000024564 | 183 |
| 210 | 3300010159 | Ga0099796_10045359 | Ga0099796_100453592 | 183 |
| 211 | 3300022730 | Ga0224570_100172 | Ga0224570_1001723 | 183 |
| 212 | 3300024225 | Ga0224572_1015399 | Ga0224572_10153992 | 183 |
| 213 | 3300024225 | Ga0224572_1028427 | Ga0224572_10284272 | 183 |
| 214 | 3300024227 | Ga0228598_1007115 | Ga0228598_10071152 | 183 |
| 215 | 3300024227 | Ga0228598_1051819 | Ga0228598_10518191 | 183 |
| 216 | 3300025898 | Ga0207692_10022743 | Ga0207692_100227433 | 183 |
| 217 | 3300025905 | Ga0207685_10031429 | Ga0207685_100314293 | 183 |
| 218 | 3300025906 | Ga0207699_10008043 | Ga0207699_100080436 | 183 |
| 219 | 3300025906 | Ga0207699_10221336 | Ga0207699_102213362 | 183 |
| 220 | 3300025913 | Ga0207695_10000350 | Ga0207695_1000035021 | 183 |
| 221 | 3300025915 | Ga0207693_10000047 | Ga0207693_1000004721 | 183 |
| 222 | 3300025915 | Ga0207693_10000050 | Ga0207693_100000504 | 183 |
| 223 | 3300025916 | Ga0207663_10000679 | Ga0207663_1000067912 | 183 |
| 224 | 3300025928 | Ga0207700_10000069 | Ga0207700_1000006942 | 183 |
| 225 | 3300025928 | Ga0207700_10000828 | Ga0207700_100008288 | 183 |
| 226 | 3300025928 | Ga0207700_10492962 | Ga0207700_104929622 | 183 |
| 227 | 3300025928 | Ga0207700_10970742 | Ga0207700_109707421 | 183 |
| 228 | 3300025929 | Ga0207664_10000483 | Ga0207664_100004839 | 183 |
| 229 | 3300025929 | Ga0207664_10009056 | Ga0207664_100090566 | 183 |
| 230 | 3300025929 | Ga0207664_10164850 | Ga0207664_101648502 | 183 |
| 231 | 3300025929 | Ga0207664_10262394 | Ga0207664_102623942 | 183 |
| 232 | 3300025939 | Ga0207665_10004295 | Ga0207665_100042952 | 183 |
| 233 | 3300025939 | Ga0207665_10026095 | Ga0207665_100260953 | 183 |
| 234 | 3300028017 | Ga0265356_1000608 | Ga0265356_10006081 | 183 |
| 235 | 3300028017 | Ga0265356_1003725 | Ga0265356_10037253 | 183 |
| 236 | 3300028023 | Ga0265357_1030123 | Ga0265357_10301231 | 183 |
| 237 | 3300028036 | Ga0265355_1003885 | Ga0265355_10038852 | 183 |
| 238 | 3300028800 | Ga0265338_10002238 | Ga0265338_100022384 | 183 |
| 239 | 3300028800 | Ga0265338_10024605 | Ga0265338_100246054 | 183 |
| 240 | 3300028800 | Ga0265338_10233217 | Ga0265338_102332172 | 183 |
| 241 | 3300030760 | Ga0265762_1000028 | Ga0265762_10000282 | 183 |
| 242 | 3300030760 | Ga0265762_1000378 | Ga0265762_10003786 | 183 |
| 243 | 3300030760 | Ga0265762_1003045 | Ga0265762_10030453 | 183 |
| 244 | 3300031090 | Ga0265760_10003584 | Ga0265760_100035843 | 183 |
| 245 | 3300031249 | Ga0265339_10158646 | Ga0265339_101586462 | 183 |
| 246 | 3300031344 | Ga0265316_10020186 | Ga0265316_100201865 | 183 |
| 247 | 3300031344 | Ga0265316_10033629 | Ga0265316_100336294 | 183 |
| 248 | 3300035083 | Ga0373926_0121732 | Ga0373926_0121732_292_843 | 183 |
| 249 | 3300035089 | Ga0373944_0040803 | Ga0373944_0040803_795_1346 | 183 |
| 250 | 3300035119 | Ga0373956_0009018 | Ga0373956_0009018_2842_3393 | 183 |
| 251 | 3300035172 | Ga0373955_0593904 | Ga0373955_0593904_107_658 | 183 |
| 252 | 3300035410 | Ga0373924_0236743 | Ga0373924_0236743_158_709 | 183 |
| 253 | 3300035692 | Ga0373935_0346427 | Ga0373935_0346427_397_948 | 183 |
| 254 | 3300035725 | Ga0373947_0622681 | Ga0373947_0622681_157_708 | 183 |
| 255 | 3300036401 | Ga0373937_0228061 | Ga0373937_0228061_867_1418 | 183 |
| 256 | 3300036401 | Ga0373937_1253568 | Ga0373937_1253568_74_625 | 183 |
| 257 | 3300037068 | Ga0373925_0021594 | Ga0373925_0021594_2753_3304 | 183 |
| 258 | 3300046459 | Ga0495629_0001766 | Ga0495629_0001766_13830_14381 | 183 |
| 259 | 3300046461 | Ga0495641_0042995 | Ga0495641_0042995_797_1348 | 183 |
| 260 | 3300046472 | Ga0495580_0001193 | Ga0495580_0001193_11381_11932 | 183 |
| 261 | 3300046472 | Ga0495580_0188577 | Ga0495580_0188577_318_869 | 183 |
| 262 | 3300046473 | Ga0495582_0012909 | Ga0495582_0012909_2528_3079 | 183 |
| 263 | 3300046477 | Ga0495664_0319537 | Ga0495664_0319537_275_826 | 183 |
| 264 | 3300046511 | Ga0495608_0296338 | Ga0495608_0296338_61_612 | 183 |
| 265 | 3300046531 | Ga0495665_0324669 | Ga0495665_0324669_46_597 | 183 |
| 266 | 3300046675 | Ga0495657_0285882 | Ga0495657_0285882_45_596 | 183 |
| 267 | 3300046690 | Ga0495624_0597050 | Ga0495624_0597050_75_626 | 183 |
| 268 | 3300047317 | Ga0495604_0354752 | Ga0495604_0354752_39_623 | 183 |
| 269 | 3300047319 | Ga0495674_0110088 | Ga0495674_0110088_82_633 | 183 |
| 270 | 3300048088 | Ga0495602_0052293 | Ga0495602_0052293_1165_1716 | 183 |
| 271 | 3300048903 | Ga0496100_0272619 | Ga0496100_0272619_200_751 | 183 |
| 272 | 3300048908 | Ga0496105_0482081 | Ga0496105_0482081_400_951 | 183 |
| 273 | 3300048918 | Ga0496115_0003383 | Ga0496115_0003383_8174_8725 | 183 |
| 274 | 3300048919 | Ga0496116_0047114 | Ga0496116_0047114_1839_2402 | 183 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ndr-assembly1.cif.gz_B | crystal structure of dtdp-6-deoxy-d-glucose-3,5-epimerase rmlc from legionella pneumophila philadelphia 1 in complex with dtdp-4-keto-l-rhamnose | 0.9785 | 4 | 180 |
| 3ryk-assembly1.cif.gz_B | 1.63 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase (rfbc) from bacillus anthracis str. ames with tdp and ppi bound | 0.9734 | 4 | 175 |
| 7pvi-assembly1.cif.gz_BBB | dtdp-sugar epimerase | 0.973 | 3 | 180 |
| 2ixk-assembly1.cif.gz_B | rmlc p aeruginosa with dtdp-4-keto rhamnnose (the product of the reaction) | 0.9711 | 1 | 183 |
| 2ixh-assembly1.cif.gz_A | rmlc p aeruginosa with dtdp-rhamnose | 0.9704 | 1 | 183 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1epzA00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9666 | 4 | 183 | 2.60.120.10 |
| 2ixcB00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9578 | 5 | 178 | 2.60.120.10 |
| af_Q17993_17_190_2.60.120.10 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9561 | 10 | 179 | 2.60.120.10 |
| 6dinA00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9557 | 2 | 183 | 2.60.120.10 |
| 2c0zA01 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9548 | 5 | 179 | 2.60.120.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V9TFQ7-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9993 | 5 | 183 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A2V9XM88-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.996 | 5 | 161 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A6P0Z7Y0-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9957 | 5 | 160 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-K8GGX3-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9944 | 5 | 183 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
| AF-A0A518A8X9-F1-model_v4 | dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (Thymidine diphospho-4-keto-rhamnose 3,5-epimerase) | 0.9942 | 5 | 182 |
GO:0005829
GO:0008830 GO:0019305 GO:0045226 |
Predicted Structure (AlphaFold2)
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