F379344

General Info

Members Datasets Scaffolds Average Seq Length
273 195 546 244

Family's Representative Sequence

Representative Sequence 3300050509|nmdc:mga0qj67_56347_c1|nmdc:mga0qj67_56347_c1_1410_2189
Length 259
Sequence MRARAEGAGMRAIHLGVNIDHVATLRQVRRATYPDPLLAALIAEQSGADSITLHLREDRRHIQDHDARRMRLALQTRMNLELAATDAMVALAREIGPQDCCLVPERREEVTTEGGLDVAGQLPRLTQVCRTLAGGGIRVSLFIDPELRQIEAARAAGATVVELHTGAYAESTGERRAIELKRITDAARLGESLGLTIHAGHGLNYHNVQPVAAIDEIVELNIGHAIVARAVVSGIAMAVKEMKALMLDARRSVPRGMGG

Samples

Sample ID Description Type Environment
1 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
107 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
108 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
109 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
115 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
117 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
118 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
119 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
120 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
127 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
131 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
132 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
135 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
136 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
151 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
173 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
174 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
183 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
190 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
194 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
195 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.27
Metatranscriptomes 0
Isolates 0.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.83
Nodule 0
Rhizoplane 6.96
Rhizosphere 88.28
Stem 0
Stem Tuber 0
Unclassified 0.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0qj67_56347_c1 3300050509 Bacteria 3115
2 Ga0070676_10090308 3300005328 Bacteria 1875
3 Ga0070690_100008939 3300005330 Bacteria 5788
4 Ga0070670_100015186 3300005331 Bacteria 6610
5 Ga0068869_100305304 3300005334 Bacteria 1286
6 Ga0070689_100381345 3300005340 Bacteria 1188
7 Ga0070668_100084139 3300005347 Bacteria 2498
8 Ga0070668_100323107 3300005347 Bacteria 1300
9 Ga0070669_100004128 3300005353 Bacteria 10537
10 Ga0070674_100060412 3300005356 Bacteria 2642
11 Ga0070673_100202720 3300005364 Bacteria 1709
12 Ga0070673_100315711 3300005364 Bacteria 1379
13 Ga0070659_100340665 3300005366 Bacteria 1256
14 Ga0070667_100053792 3300005367 Bacteria 3398
15 Ga0070709_10012711 3300005434 Bacteria 4715
16 Ga0070714_100062368 3300005435 Bacteria 3204
17 Ga0070713_100005802 3300005436 Bacteria 8484
18 Ga0070710_10013504 3300005437 Bacteria 4094
19 Ga0070711_100059850 3300005439 Bacteria 2645
20 Ga0070678_100011826 3300005456 Bacteria 5399
21 Ga0070662_100013442 3300005457 Bacteria 5449
22 Ga0068867_100371813 3300005459 Bacteria 1198
23 Ga0070699_100104900 3300005518 Bacteria 2479
24 Ga0068853_100575886 3300005539 Bacteria 1068
25 Ga0070672_100001429 3300005543 Bacteria 14752
26 Ga0070672_100133004 3300005543 Bacteria 2046
27 Ga0070665_100063911 3300005548 Bacteria 3690
28 Ga0070664_100057435 3300005564 Bacteria 3308
29 Ga0068857_100588482 3300005577 Bacteria 1051
30 Ga0068864_100059859 3300005618 Bacteria 3296
31 Ga0068861_100002777 3300005719 Bacteria 11490
32 Ga0068870_10034356 3300005840 Bacteria 2594
33 Ga0068863_100006949 3300005841 Bacteria 11099
34 Ga0068860_100019541 3300005843 Bacteria 6567
35 Ga0068860_100021918 3300005843 Bacteria 6181
36 Ga0068862_100008164 3300005844 Bacteria 8655
37 Ga0075364_10310643 3300006051 Bacteria 1073
38 Ga0070715_10001243 3300006163 Bacteria 7307
39 Ga0070715_10224674 3300006163 Bacteria 967
40 Ga0070716_100003057 3300006173 Bacteria 7809
41 Ga0070712_100001209 3300006175 Bacteria 15616
42 Ga0097621_100036857 3300006237 Bacteria 3914
43 Ga0068871_100072820 3300006358 Bacteria 2831
44 Ga0075428_100043916 3300006844 Bacteria 4913
45 Ga0075428_100057066 3300006844 Bacteria 4275
46 Ga0075428_100566845 3300006844 Bacteria 1213
47 Ga0075428_100679163 3300006844 Bacteria 1097
48 Ga0075430_100032543 3300006846 Bacteria 4427
49 Ga0075430_100056075 3300006846 Bacteria 3313
50 Ga0075431_100008408 3300006847 Bacteria 10332
51 Ga0075431_100066917 3300006847 Bacteria 3709
52 Ga0075434_100655066 3300006871 Bacteria 1068
53 Ga0068865_100002414 3300006881 Bacteria 11032
54 Ga0068865_100012852 3300006881 Bacteria 5278
55 Ga0105240_10140208 3300009093 Bacteria 2891
56 Ga0105245_10001541 3300009098 Bacteria 20894
57 Ga0105245_10009971 3300009098 Bacteria 8275
58 Ga0105247_10022658 3300009101 Bacteria 3783
59 Ga0105247_10030623 3300009101 Bacteria 3261
60 Ga0114129_10165405 3300009147 Bacteria 3019
61 Ga0114129_10686820 3300009147 Bacteria 1317
62 Ga0105242_10007582 3300009176 Bacteria 8354
63 Ga0105248_10004248 3300009177 Bacteria 15852
64 Ga0105248_10021597 3300009177 Bacteria 7129
65 Ga0105237_10050412 3300009545 Bacteria 4182
66 Ga0105238_10020661 3300009551 Bacteria 6707
67 Ga0105246_10007229 3300011119 Bacteria 6801
68 Ga0157374_10001886 3300013296 Bacteria 17585
69 Ga0157374_10007257 3300013296 Bacteria 9441
70 Ga0157378_10042632 3300013297 Bacteria 4028
71 Ga0163162_10007112 3300013306 Bacteria 10858
72 Ga0157375_10020452 3300013308 Bacteria 6048
73 Ga0163163_10231852 3300014325 Bacteria 1895
74 Ga0157376_10016793 3300014969 Bacteria 5567
75 Ga0213873_10005647 3300021358 Bacteria 2413
76 Ga0213876_10030377 3300021384 Bacteria 2850
77 Ga0207692_10038026 3300025898 Bacteria 2358
78 Ga0207642_10014083 3300025899 Bacteria 2940
79 Ga0207680_10011744 3300025903 Bacteria 4436
80 Ga0207680_10017494 3300025903 Bacteria 3789
81 Ga0207685_10072363 3300025905 Bacteria 1401
82 Ga0207645_10000744 3300025907 Bacteria 27131
83 Ga0207643_10032546 3300025908 Bacteria 2913
84 Ga0207671_10438392 3300025914 Bacteria 1040
85 Ga0207693_10000059 3300025915 Bacteria 94053
86 Ga0207663_10039491 3300025916 Bacteria 2860
87 Ga0207681_10027780 3300025923 Bacteria 3661
88 Ga0207694_10055660 3300025924 Bacteria 3070
89 Ga0207650_10070007 3300025925 Bacteria 2636
90 Ga0207687_10101330 3300025927 Bacteria 2120
91 Ga0207700_10109034 3300025928 Bacteria 2224
92 Ga0207700_10560727 3300025928 Bacteria 1014
93 Ga0207664_10150909 3300025929 Bacteria 1974
94 Ga0207644_10006519 3300025931 Bacteria 7611
95 Ga0207690_10189010 3300025932 Bacteria 1556
96 Ga0207706_10000228 3300025933 Bacteria 61381
97 Ga0207706_10371176 3300025933 Bacteria 1242
98 Ga0207670_10073429 3300025936 Bacteria 2372
99 Ga0207669_10088447 3300025937 Bacteria 2009
100 Ga0207704_10014447 3300025938 Bacteria 3986
101 Ga0207665_10001746 3300025939 Bacteria 14583
102 Ga0207691_10005052 3300025940 Bacteria 12732
103 Ga0207691_10149320 3300025940 Bacteria 2055
104 Ga0207711_10004744 3300025941 Bacteria 11542
105 Ga0207711_10186683 3300025941 Bacteria 1888
106 Ga0207689_10147037 3300025942 Bacteria 1942
107 Ga0207661_10084064 3300025944 Bacteria 2635
108 Ga0207679_10334495 3300025945 Bacteria 1315
109 Ga0207651_10009009 3300025960 Bacteria 5427
110 Ga0207651_10273167 3300025960 Bacteria 1393
111 Ga0207668_10017423 3300025972 Bacteria 4501
112 Ga0207658_10108057 3300025986 Bacteria 2193
113 Ga0207677_10004796 3300026023 Bacteria 7297
114 Ga0207677_10246575 3300026023 Bacteria 1448
115 Ga0207703_10009472 3300026035 Bacteria 7646
116 Ga0207703_10583439 3300026035 Bacteria 1056
117 Ga0207702_10231761 3300026078 Bacteria 1726
118 Ga0207641_10235178 3300026088 Bacteria 1705
119 Ga0207648_10006688 3300026089 Bacteria 11434
120 Ga0207676_10007457 3300026095 Bacteria 7760
121 Ga0207675_100000130 3300026118 Bacteria 63098
122 Ga0207683_10016258 3300026121 Bacteria 6330
123 Ga0207683_10255077 3300026121 Bacteria 1601
124 Ga0209969_1016302 3300027360 Bacteria 1089
125 Ga0209983_1004183 3300027665 Bacteria 3043
126 Ga0209998_10000929 3300027717 Bacteria 7483
127 Ga0209974_10002401 3300027876 Bacteria 6790
128 Ga0268265_10007796 3300028380 Bacteria 7229
129 Ga0268264_10063564 3300028381 Bacteria 3103
130 Ga0268264_10276029 3300028381 Bacteria 1572
131 Ga0307408_100135472 3300031548 Bacteria 1927
132 Ga0316575_10103511 3300031665 Bacteria 1159
133 Ga0316575_10134630 3300031665 Bacteria 1015
134 Ga0316576_10009626 3300031727 Bacteria 6248
135 Ga0316576_10281841 3300031727 Bacteria 1244
136 Ga0316578_10046395 3300031728 Bacteria 2532
137 Ga0316578_10146902 3300031728 Bacteria 1420
138 Ga0316577_10018330 3300031733 Bacteria 3870
139 Ga0316577_10052601 3300031733 Bacteria 2273
140 Ga0307413_10177736 3300031824 Bacteria 1514
141 Ga0307413_10219427 3300031824 Bacteria 1388
142 Ga0307410_10479269 3300031852 Bacteria 1020
143 Ga0307409_100259408 3300031995 Bacteria 1594
144 Ga0307409_100577040 3300031995 Bacteria 1108
145 Ga0307409_101100597 3300031995 Bacteria 816
146 Ga0307416_100029156 3300032002 Bacteria 4118
147 Ga0316585_10098492 3300032137 Archaea 958
148 Ga0373923_0119163 3300035111 Bacteria 1178
149 Ga0373945_0081597 3300035116 Bacteria 1240
150 Ga0373954_0159795 3300035118 Bacteria 1102
151 Ga0373946_0037867 3300035171 Bacteria 1962
152 Ga0373955_0047258 3300035172 Bacteria 2330
153 Ga0316574_0051847 3300035398 Bacteria 2558
154 Ga0373935_0170160 3300035692 Bacteria 1490
155 Ga0373927_0165020 3300035695 Bacteria 1451
156 Ga0373933_0313111 3300035724 Bacteria 1017
157 Ga0373947_0014830 3300035725 Bacteria 4472
158 Ga0373937_0015857 3300036401 Bacteria 6679
159 Ga0373937_0172538 3300036401 Bacteria 2029
160 Ga0316582_0020637 3300036647 Bacteria 3878
161 Ga0316582_0022569 3300036647 Unclassified 3738
162 Ga0316582_0045234 3300036647 Bacteria 2771
163 Ga0316582_0537491 3300036647 Bacteria 805
164 Ga0316584_0000175 3300036712 Bacteria 30687
165 Ga0316584_0143693 3300036712 Bacteria 1778
166 Ga0373925_0298185 3300037068 Bacteria 1301
167 Ga0395898_0091800 3300037466 Bacteria 2921
168 Ga0400490_14824 3300038726 Bacteria 6892
169 Ga0400490_60962 3300038726 Bacteria 8068
170 Ga0400483_276532 3300039062 Bacteria 3312
171 Ga0400489_73342 3300039093 Bacteria 3222
172 Ga0436365_1173021 3300039437 Bacteria 4546
173 Ga0436362_0822225 3300039453 Bacteria 5530
174 Ga0450896_001781 3300042133 Bacteria 2710
175 Ga0439460_0010354 3300042461 Bacteria 2384
176 Ga0451577_0016527 3300042876 Bacteria 6831
177 Ga0451577_0037433 3300042876 Bacteria 4367
178 Ga0451577_0088811 3300042876 Bacteria 2758
179 Ga0451577_0089990 3300042876 Unclassified 2739
180 Ga0451577_0484211 3300042876 Bacteria 1123
181 Ga0451577_0598242 3300042876 Bacteria 1001
182 Ga0453683_0096992 3300044673 Bacteria 1850
183 Ga0453684_0435855 3300044712 Bacteria 1461
184 Ga0451576_0008753 3300045051 Bacteria 11843
185 Ga0451576_1084356 3300045051 Bacteria 838
186 Ga0495580_0119552 3300046472 Bacteria 1829
187 Ga0495587_0362028 3300046536 Bacteria 808
188 Ga0495599_0048657 3300046678 Bacteria 2658
189 Ga0495658_0038948 3300046683 Bacteria 2635
190 Ga0495624_0308476 3300046690 Bacteria 954
191 Ga0495672_0000492 3300047320 Bacteria 46021
192 Ga0496100_0039894 3300048903 Bacteria 2983
193 Ga0496101_0006421 3300048904 Bacteria 7564
194 Ga0496102_0053432 3300048905 Bacteria 3682
195 Ga0496102_0269259 3300048905 Bacteria 1606
196 Ga0496103_0017783 3300048906 Bacteria 4259
197 Ga0496105_0058225 3300048908 Bacteria 3189
198 Ga0496106_0003659 3300048909 Bacteria 11461
199 Ga0496106_0096033 3300048909 Bacteria 2293
200 Ga0496107_0017187 3300048910 Bacteria 5088
201 Ga0496107_0131412 3300048910 Bacteria 1848
202 Ga0496108_0158842 3300048911 Bacteria 1953
203 Ga0496109_0027680 3300048912 Bacteria 5065
204 Ga0496109_0080093 3300048912 Bacteria 3009
205 Ga0496110_0113133 3300048913 Bacteria 2440
206 Ga0496110_0285133 3300048913 Bacteria 1504
207 Ga0496112_0041805 3300048915 Bacteria 4485
208 Ga0496112_0044604 3300048915 Bacteria 4345
209 Ga0496114_0062622 3300048917 Bacteria 3113
210 Ga0496115_0084211 3300048918 Bacteria 2592
211 Ga0501036_0017167 3300049572 Bacteria 6050
212 Ga0501036_0121164 3300049572 Bacteria 2209
213 Ga0501036_0304958 3300049572 Bacteria 1332
214 Ga0501037_0399305 3300049573 Bacteria 943
215 Ga0501038_0213113 3300049574 Bacteria 1544
216 Ga0501038_0315923 3300049574 Bacteria 1223
217 Ga0501039_0040760 3300049575 Bacteria 3584
218 Ga0501040_0074187 3300049576 Bacteria 2351
219 Ga0501041_0075638 3300049577 Bacteria 2071
220 Ga0501041_0203182 3300049577 Bacteria 1242
221 Ga0501042_0016596 3300049578 Bacteria 5058
222 Ga0501042_0067927 3300049578 Bacteria 2549
223 Ga0501046_0334841 3300049580 Bacteria 1101
224 Ga0501048_0019433 3300049582 Bacteria 4984
225 Ga0501068_0145618 3300049584 Bacteria 1487
226 Ga0501071_0019740 3300049587 Bacteria 4678
227 Ga0501072_0047679 3300049588 Bacteria 3374
228 Ga0501072_0106685 3300049588 Bacteria 2228
229 Ga0501072_0118767 3300049588 Bacteria 2107
230 Ga0501072_0225128 3300049588 Bacteria 1495
231 Ga0501074_0286247 3300049590 Bacteria 1171
232 Ga0501075_0049297 3300049591 Bacteria 3165
233 Ga0501075_0556970 3300049591 Bacteria 875
234 Ga0501076_0246795 3300049592 Bacteria 1461
235 Ga0501076_0432878 3300049592 Bacteria 1083
236 Ga0501076_0498649 3300049592 Bacteria 1003
237 Ga0501079_0241770 3300049741 Bacteria 1410
238 Ga0501079_0288527 3300049741 Bacteria 1283
239 Ga0501079_0761961 3300049741 Bacteria 762
240 Ga0501080_0327739 3300049742 Bacteria 1385
241 Ga0501080_0341639 3300049742 Bacteria 1353
242 Ga0501081_0040604 3300049743 Bacteria 3186
243 Ga0501083_0099805 3300049744 Bacteria 1915
244 Ga0501035_0279062 3300049822 Bacteria 1413
245 Ga0501045_0245269 3300049824 Bacteria 1333
246 Ga0501045_0321901 3300049824 Bacteria 1151
247 nmdc:mga03n38_16525_c1 3300050490 Bacteria 2871
248 nmdc:mga00v17_32702_c1 3300050491 Bacteria 3076
249 nmdc:mga06z11_30740_c1 3300050494 Bacteria 2601
250 nmdc:mga05p37_127135_c1 3300050507 Bacteria 3129
251 nmdc:mga05p37_182736_c1 3300050507 Bacteria 2551
252 nmdc:mga09592_207794_c1 3300050508 Bacteria 1696
253 nmdc:mga0qj67_110730_c1 3300050509 Bacteria 2217
254 nmdc:mga0qj67_166586_c1 3300050509 Bacteria 1789
255 nmdc:mga06r32_112482_c1 3300050510 Bacteria 2679
256 nmdc:mga06r32_183675_c1 3300050510 Bacteria 2078
257 nmdc:mga06r32_326859_c1 3300050510 Bacteria 1519
258 nmdc:mga06r32_47792_c1 3300050510 Bacteria 4089
259 nmdc:mga06r32_9891_c1 3300050510 Bacteria 8607
260 nmdc:mga08y16_68408_c1 3300050511 Bacteria 3703
261 nmdc:mga0n895_712534_c1 3300050512 Bacteria 999
262 Ga0495601_0020205 3300053077 Bacteria 4067
263 Ga0495601_0148491 3300053077 Bacteria 1530
264 Ga0500588_0001420 3300053146 Bacteria 4547
265 Ga0501084_0039235 3300054114 Bacteria 3961
266 Ga0501084_0185673 3300054114 Bacteria 1755
267 Ga0501084_0262229 3300054114 Bacteria 1459
268 Ga0501082_0034160 3300060353 Bacteria 4387
269 Ga0501082_0189455 3300060353 Bacteria 1790
270 Ga0501082_0423675 3300060353 Bacteria 1162
271 Ga0530510_0134097 3300061734 Bacteria 1823
272 2874627030 2874620515 Bacteria 8290088
273 2904669731 2904666416 Bacteria 8226587
274 nmdc:mga0qj67_56347_c1
275 Ga0070676_10090308
276 Ga0070690_100008939
277 Ga0070670_100015186
278 Ga0068869_100305304
279 Ga0070689_100381345
280 Ga0070668_100084139
281 Ga0070668_100323107
282 Ga0070669_100004128
283 Ga0070674_100060412
284 Ga0070673_100202720
285 Ga0070673_100315711
286 Ga0070659_100340665
287 Ga0070667_100053792
288 Ga0070709_10012711
289 Ga0070714_100062368
290 Ga0070713_100005802
291 Ga0070710_10013504
292 Ga0070711_100059850
293 Ga0070678_100011826
294 Ga0070662_100013442
295 Ga0068867_100371813
296 Ga0070699_100104900
297 Ga0068853_100575886
298 Ga0070672_100001429
299 Ga0070672_100133004
300 Ga0070665_100063911
301 Ga0070664_100057435
302 Ga0068857_100588482
303 Ga0068864_100059859
304 Ga0068861_100002777
305 Ga0068870_10034356
306 Ga0068863_100006949
307 Ga0068860_100019541
308 Ga0068860_100021918
309 Ga0068862_100008164
310 Ga0075364_10310643
311 Ga0070715_10001243
312 Ga0070715_10224674
313 Ga0070716_100003057
314 Ga0070712_100001209
315 Ga0097621_100036857
316 Ga0068871_100072820
317 Ga0075428_100043916
318 Ga0075428_100057066
319 Ga0075428_100566845
320 Ga0075428_100679163
321 Ga0075430_100032543
322 Ga0075430_100056075
323 Ga0075431_100008408
324 Ga0075431_100066917
325 Ga0075434_100655066
326 Ga0068865_100002414
327 Ga0068865_100012852
328 Ga0105240_10140208
329 Ga0105245_10001541
330 Ga0105245_10009971
331 Ga0105247_10022658
332 Ga0105247_10030623
333 Ga0114129_10165405
334 Ga0114129_10686820
335 Ga0105242_10007582
336 Ga0105248_10004248
337 Ga0105248_10021597
338 Ga0105237_10050412
339 Ga0105238_10020661
340 Ga0105246_10007229
341 Ga0157374_10001886
342 Ga0157374_10007257
343 Ga0157378_10042632
344 Ga0163162_10007112
345 Ga0157375_10020452
346 Ga0163163_10231852
347 Ga0157376_10016793
348 Ga0213873_10005647
349 Ga0213876_10030377
350 Ga0207692_10038026
351 Ga0207642_10014083
352 Ga0207680_10011744
353 Ga0207680_10017494
354 Ga0207685_10072363
355 Ga0207645_10000744
356 Ga0207643_10032546
357 Ga0207671_10438392
358 Ga0207693_10000059
359 Ga0207663_10039491
360 Ga0207681_10027780
361 Ga0207694_10055660
362 Ga0207650_10070007
363 Ga0207687_10101330
364 Ga0207700_10109034
365 Ga0207700_10560727
366 Ga0207664_10150909
367 Ga0207644_10006519
368 Ga0207690_10189010
369 Ga0207706_10000228
370 Ga0207706_10371176
371 Ga0207670_10073429
372 Ga0207669_10088447
373 Ga0207704_10014447
374 Ga0207665_10001746
375 Ga0207691_10005052
376 Ga0207691_10149320
377 Ga0207711_10004744
378 Ga0207711_10186683
379 Ga0207689_10147037
380 Ga0207661_10084064
381 Ga0207679_10334495
382 Ga0207651_10009009
383 Ga0207651_10273167
384 Ga0207668_10017423
385 Ga0207658_10108057
386 Ga0207677_10004796
387 Ga0207677_10246575
388 Ga0207703_10009472
389 Ga0207703_10583439
390 Ga0207702_10231761
391 Ga0207641_10235178
392 Ga0207648_10006688
393 Ga0207676_10007457
394 Ga0207675_100000130
395 Ga0207683_10016258
396 Ga0207683_10255077
397 Ga0209969_1016302
398 Ga0209983_1004183
399 Ga0209998_10000929
400 Ga0209974_10002401
401 Ga0268265_10007796
402 Ga0268264_10063564
403 Ga0268264_10276029
404 Ga0307408_100135472
405 Ga0316575_10103511
406 Ga0316575_10134630
407 Ga0316576_10009626
408 Ga0316576_10281841
409 Ga0316578_10046395
410 Ga0316578_10146902
411 Ga0316577_10018330
412 Ga0316577_10052601
413 Ga0307413_10177736
414 Ga0307413_10219427
415 Ga0307410_10479269
416 Ga0307409_100259408
417 Ga0307409_100577040
418 Ga0307409_101100597
419 Ga0307416_100029156
420 Ga0316585_10098492
421 Ga0373923_0119163
422 Ga0373945_0081597
423 Ga0373954_0159795
424 Ga0373946_0037867
425 Ga0373955_0047258
426 Ga0316574_0051847
427 Ga0373935_0170160
428 Ga0373927_0165020
429 Ga0373933_0313111
430 Ga0373947_0014830
431 Ga0373937_0015857
432 Ga0373937_0172538
433 Ga0316582_0020637
434 Ga0316582_0022569
435 Ga0316582_0045234
436 Ga0316582_0537491
437 Ga0316584_0000175
438 Ga0316584_0143693
439 Ga0373925_0298185
440 Ga0395898_0091800
441 Ga0400490_14824
442 Ga0400490_60962
443 Ga0400483_276532
444 Ga0400489_73342
445 Ga0436365_1173021
446 Ga0436362_0822225
447 Ga0450896_001781
448 Ga0439460_0010354
449 Ga0451577_0016527
450 Ga0451577_0037433
451 Ga0451577_0088811
452 Ga0451577_0089990
453 Ga0451577_0484211
454 Ga0451577_0598242
455 Ga0453683_0096992
456 Ga0453684_0435855
457 Ga0451576_0008753
458 Ga0451576_1084356
459 Ga0495580_0119552
460 Ga0495587_0362028
461 Ga0495599_0048657
462 Ga0495658_0038948
463 Ga0495624_0308476
464 Ga0495672_0000492
465 Ga0496100_0039894
466 Ga0496101_0006421
467 Ga0496102_0053432
468 Ga0496102_0269259
469 Ga0496103_0017783
470 Ga0496105_0058225
471 Ga0496106_0003659
472 Ga0496106_0096033
473 Ga0496107_0017187
474 Ga0496107_0131412
475 Ga0496108_0158842
476 Ga0496109_0027680
477 Ga0496109_0080093
478 Ga0496110_0113133
479 Ga0496110_0285133
480 Ga0496112_0041805
481 Ga0496112_0044604
482 Ga0496114_0062622
483 Ga0496115_0084211
484 Ga0501036_0017167
485 Ga0501036_0121164
486 Ga0501036_0304958
487 Ga0501037_0399305
488 Ga0501038_0213113
489 Ga0501038_0315923
490 Ga0501039_0040760
491 Ga0501040_0074187
492 Ga0501041_0075638
493 Ga0501041_0203182
494 Ga0501042_0016596
495 Ga0501042_0067927
496 Ga0501046_0334841
497 Ga0501048_0019433
498 Ga0501068_0145618
499 Ga0501071_0019740
500 Ga0501072_0047679
501 Ga0501072_0106685
502 Ga0501072_0118767
503 Ga0501072_0225128
504 Ga0501074_0286247
505 Ga0501075_0049297
506 Ga0501075_0556970
507 Ga0501076_0246795
508 Ga0501076_0432878
509 Ga0501076_0498649
510 Ga0501079_0241770
511 Ga0501079_0288527
512 Ga0501079_0761961
513 Ga0501080_0327739
514 Ga0501080_0341639
515 Ga0501081_0040604
516 Ga0501083_0099805
517 Ga0501035_0279062
518 Ga0501045_0245269
519 Ga0501045_0321901
520 nmdc:mga03n38_16525_c1
521 nmdc:mga00v17_32702_c1
522 nmdc:mga06z11_30740_c1
523 nmdc:mga05p37_127135_c1
524 nmdc:mga05p37_182736_c1
525 nmdc:mga09592_207794_c1
526 nmdc:mga0qj67_110730_c1
527 nmdc:mga0qj67_166586_c1
528 nmdc:mga06r32_112482_c1
529 nmdc:mga06r32_183675_c1
530 nmdc:mga06r32_326859_c1
531 nmdc:mga06r32_47792_c1
532 nmdc:mga06r32_9891_c1
533 nmdc:mga08y16_68408_c1
534 nmdc:mga0n895_712534_c1
535 Ga0495601_0020205
536 Ga0495601_0148491
537 Ga0500588_0001420
538 Ga0501084_0039235
539 Ga0501084_0185673
540 Ga0501084_0262229
541 Ga0501082_0034160
542 Ga0501082_0189455
543 Ga0501082_0423675
544 Ga0530510_0134097
545 2874627030
546 2904669731

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03740

PdxJ

Pyridoxal phosphate biosynthesis protein PdxJ

14

246

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ixo-assembly3.cif.gz_A-2 enzyme-analogue substrate complex of pyridoxine 5'-phosphate synthase 0.9853 3 241
3f4n-assembly5.cif.gz_B crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis 0.9797 4 241
1ixo-assembly3.cif.gz_A-2 enzyme-analogue substrate complex of pyridoxine 5'-phosphate synthase 0.9728 3 241
3f4n-assembly2.cif.gz_C crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis 0.9684 1 241
5dlc-assembly2.cif.gz_D x-ray crystal structure of a pyridoxine 5-prime-phosphate synthase from pseudomonas aeruginosa 0.967 3 241
ID Description Score Start End Superfamily
3gk0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9655 2 243 3.20.20.70
3o6cA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9103 4 237 3.20.20.70
3o6cA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8434 4 237 3.20.20.70
3t40A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8345 1 232 3.20.20.70
3tsmB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8112 3 232 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A838WB23-F1-model_v4 Pyridoxine 5'-phosphate synthase 1.001 144 241 GO:0005829
GO:0008615
GO:0033856
AF-A0A258Y1V2-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9994 155 241 GO:0005829
GO:0008615
GO:0033856
AF-A0A3B9DKA1-F1-model_v4 deleted 0.9991 141 241
AF-A0A1W1DK76-F1-model_v4 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.9987 117 241 GO:0005829
GO:0008615
GO:0033856
AF-A0A3D5AYN3-F1-model_v4 Pyridoxine 5'-phosphate synthase 0.9987 149 242 GO:0005829
GO:0008615
GO:0033856

Map