F379092

General Info

Members Datasets Scaffolds Average Seq Length
273 177 546 240

Family's Representative Sequence

Representative Sequence 3300026067|Ga0207678_10263089|Ga0207678_102630892
Length 263
Sequence VSTNDVSSNGSTTGDHTFGGGDGPSYDGPMLTVDDIHVYYGNIAAVKGISIEVKQGEIVTLIGSNGAGKSTTMRAISGLVSPRRGSITFEGRKISGMPGHQVTALGISQSPEGRRIFGRMTVDENLDLGAFLRNDKDGILEDRERIYELFPRLKERIHQKAGTLSGGEQQMLAVARALMTRPRLLMLDEPSMGLAPLLVELIFNTIKQIREQGMTILLVEQNALAALDVADRAYVLESGVIKQTGRAADLAASDEVRKAYLGG

Samples

Sample ID Description Type Environment
1 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
104 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
167 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
168 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
174 2906610324
175 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
176 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
177 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.53
Metatranscriptomes 0.37
Isolates 1.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.99
Nodule 1.1
Rhizoplane 16.48
Rhizosphere 68.86
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207678_10263089 3300026067 Bacteria 1478
2 SwRhRL2b_contig_2017935 2162886007 Bacteria 3374
3 JGI25406J46586_10019055 3300003203 Bacteria 2806
4 Ga0065704_10071024 3300005289 Bacteria 13658
5 Ga0065707_10015655 3300005295 Bacteria 1711
6 Ga0065707_10082145 3300005295 Bacteria 20864
7 Ga0070683_100045625 3300005329 Bacteria 4046
8 Ga0070683_100870748 3300005329 Bacteria 864
9 Ga0070670_100011169 3300005331 Bacteria 7675
10 Ga0070691_10168940 3300005341 Bacteria 1132
11 Ga0070661_100381107 3300005344 Bacteria 1112
12 Ga0070674_100205575 3300005356 Bacteria 1523
13 Ga0070674_100661262 3300005356 Bacteria 889
14 Ga0070667_100154906 3300005367 Bacteria 2015
15 Ga0070714_100540927 3300005435 Bacteria 1114
16 Ga0070713_100170464 3300005436 Bacteria 1950
17 Ga0070708_100002133 3300005445 Bacteria 15285
18 Ga0070708_100064693 3300005445 Bacteria 3277
19 Ga0070708_100277862 3300005445 Bacteria 1576
20 Ga0070708_100587793 3300005445 Bacteria 1050
21 Ga0070663_100041716 3300005455 Bacteria 3221
22 Ga0070681_10011288 3300005458 Bacteria 8837
23 Ga0070681_10058080 3300005458 Bacteria 3849
24 Ga0070706_100143080 3300005467 Bacteria 2232
25 Ga0070706_100513811 3300005467 Bacteria 1114
26 Ga0070707_100023428 3300005468 Bacteria 5841
27 Ga0070707_100160082 3300005468 Bacteria 2193
28 Ga0070707_100178015 3300005468 Bacteria 2073
29 Ga0070698_100005237 3300005471 Bacteria 14187
30 Ga0070698_100013592 3300005471 Bacteria 8618
31 Ga0070698_100410796 3300005471 Bacteria 1287
32 Ga0070698_100946281 3300005471 Bacteria 808
33 Ga0070699_100047406 3300005518 Bacteria 3718
34 Ga0070699_100235127 3300005518 Bacteria 1634
35 Ga0070699_100346900 3300005518 Bacteria 1337
36 Ga0070697_100044382 3300005536 Bacteria 3600
37 Ga0070697_100172733 3300005536 Bacteria 1830
38 Ga0070672_100753555 3300005543 Bacteria 855
39 Ga0070686_100117688 3300005544 Bacteria 1820
40 Ga0070696_100023182 3300005546 Bacteria 4218
41 Ga0070665_100011100 3300005548 Bacteria 9101
42 Ga0070665_100347322 3300005548 Bacteria 1489
43 Ga0070704_100490833 3300005549 Bacteria 1064
44 Ga0068855_100060100 3300005563 Bacteria 4446
45 Ga0070664_100304459 3300005564 Bacteria 1441
46 Ga0068856_100410530 3300005614 Bacteria 1374
47 Ga0068859_100414631 3300005617 Bacteria 1443
48 Ga0068864_100007963 3300005618 Bacteria 8733
49 Ga0068864_100953861 3300005618 Bacteria 849
50 Ga0068863_100023302 3300005841 Bacteria 5915
51 Ga0068860_100066130 3300005843 Bacteria 3434
52 Ga0081455_10000368 3300005937 Bacteria 59452
53 Ga0081540_1051087 3300005983 Bacteria 2047
54 Ga0081539_10191346 3300005985 Bacteria 952
55 Ga0075365_10006304 3300006038 Bacteria 6513
56 Ga0075365_10007371 3300006038 Bacteria 6152
57 Ga0075365_10016626 3300006038 Bacteria 4479
58 Ga0075365_10030525 3300006038 Bacteria 3453
59 Ga0075368_10069699 3300006042 Bacteria 1418
60 Ga0075363_100040283 3300006048 Bacteria 2462
61 Ga0075364_10000918 3300006051 Bacteria 15573
62 Ga0075364_10004744 3300006051 Bacteria 7852
63 Ga0075364_10009610 3300006051 Bacteria 5809
64 Ga0075364_10012963 3300006051 Bacteria 5117
65 Ga0070712_100003417 3300006175 Bacteria 9769
66 Ga0075362_10004884 3300006177 Bacteria 4850
67 Ga0075362_10015407 3300006177 Bacteria 3110
68 Ga0075367_10053102 3300006178 Bacteria 2400
69 Ga0075367_10151661 3300006178 Bacteria 1438
70 Ga0075369_10037904 3300006186 Bacteria 2055
71 Ga0075431_100314210 3300006847 Bacteria 1581
72 Ga0097620_100414594 3300006931 Bacteria 1443
73 Ga0099794_10094466 3300007265 Bacteria 1487
74 Ga0099795_10195198 3300007788 Bacteria 852
75 Ga0114129_10030350 3300009147 Bacteria 7650
76 Ga0105243_10023425 3300009148 Bacteria 4702
77 Ga0105242_10305021 3300009176 Bacteria 1455
78 Ga0105248_10017421 3300009177 Bacteria 7920
79 Ga0105248_10601253 3300009177 Bacteria 1241
80 Ga0105238_10600003 3300009551 Bacteria 1109
81 Ga0105249_10338498 3300009553 Bacteria 1520
82 Ga0105249_10614173 3300009553 Bacteria 1143
83 Ga0163162_10140571 3300013306 Bacteria 2527
84 Ga0157375_10100618 3300013308 Bacteria 2972
85 Ga0163163_10028043 3300014325 Bacteria 5402
86 Ga0163163_10333344 3300014325 Bacteria 1572
87 Ga0157380_10162201 3300014326 Bacteria 1944
88 Ga0157379_10250724 3300014968 Bacteria 1607
89 Ga0157379_10333643 3300014968 Bacteria 1386
90 Ga0157379_10841582 3300014968 Bacteria 868
91 Ga0213876_10116197 3300021384 Bacteria 1420
92 Ga0213875_10022574 3300021388 Bacteria 3009
93 Ga0209676_1000065 3300025292 Bacteria 318605
94 Ga0209758_1011139 3300025297 Bacteria 5252
95 Ga0207692_10048608 3300025898 Bacteria 2136
96 Ga0207692_10157755 3300025898 Bacteria 1305
97 Ga0207688_10165856 3300025901 Bacteria 1311
98 Ga0207685_10242062 3300025905 Bacteria 868
99 Ga0207699_10240124 3300025906 Bacteria 1244
100 Ga0207645_10157370 3300025907 Bacteria 1485
101 Ga0207684_10023385 3300025910 Bacteria 5277
102 Ga0207684_10052370 3300025910 Bacteria 3464
103 Ga0207684_10296437 3300025910 Bacteria 1394
104 Ga0207707_10012054 3300025912 Bacteria 7518
105 Ga0207707_10044251 3300025912 Bacteria 3882
106 Ga0207693_10012753 3300025915 Bacteria 6784
107 Ga0207646_10107778 3300025922 Bacteria 2499
108 Ga0207646_10132302 3300025922 Bacteria 2246
109 Ga0207646_10222230 3300025922 Bacteria 1706
110 Ga0207650_10037392 3300025925 Bacteria 3537
111 Ga0207650_10326536 3300025925 Bacteria 1258
112 Ga0207687_10087034 3300025927 Bacteria 2270
113 Ga0207687_10288402 3300025927 Bacteria 1318
114 Ga0207664_10769502 3300025929 Bacteria 866
115 Ga0207690_10047429 3300025932 Bacteria 2851
116 Ga0207706_10346056 3300025933 Bacteria 1293
117 Ga0207706_10618487 3300025933 Bacteria 929
118 Ga0207686_10273652 3300025934 Bacteria 1243
119 Ga0207709_10030096 3300025935 Bacteria 3156
120 Ga0207669_10603280 3300025937 Bacteria 892
121 Ga0207704_10351030 3300025938 Bacteria 1148
122 Ga0207667_10304639 3300025949 Bacteria 1628
123 Ga0207712_10085922 3300025961 Bacteria 2303
124 Ga0207712_10522929 3300025961 Bacteria 1017
125 Ga0207703_10422534 3300026035 Bacteria 1240
126 Ga0207678_10031893 3300026067 Bacteria 4594
127 Ga0207641_10035283 3300026088 Bacteria 4165
128 Ga0207676_10034065 3300026095 Bacteria 3853
129 Ga0207676_10153728 3300026095 Bacteria 1985
130 Ga0207675_100283597 3300026118 Bacteria 1610
131 Ga0207683_10028206 3300026121 Bacteria 4853
132 Ga0207683_10049395 3300026121 Bacteria 3683
133 Ga0268266_10041534 3300028379 Bacteria 3925
134 Ga0268266_10048143 3300028379 Bacteria 3653
135 Ga0268266_10062740 3300028379 Bacteria 3208
136 Ga0268265_10258116 3300028380 Bacteria 1548
137 Ga0268264_10062517 3300028381 Bacteria 3127
138 Ga0265760_10052087 3300031090 Bacteria 1234
139 Ga0265330_10016093 3300031235 Bacteria 3455
140 Ga0265325_10118191 3300031241 Bacteria 1281
141 Ga0265316_10245680 3300031344 Bacteria 1315
142 Ga0265342_10071082 3300031712 Bacteria 2029
143 Ga0307405_10007918 3300031731 Bacteria 5355
144 Ga0307406_10005660 3300031901 Bacteria 6832
145 Ga0307407_10002627 3300031903 Bacteria 7102
146 Ga0307409_100000693 3300031995 Bacteria 14975
147 Ga0307416_100018136 3300032002 Bacteria 4949
148 Ga0307415_100000303 3300032126 Bacteria 21269
149 Ga0307415_100039748 3300032126 Bacteria 3112
150 Ga0307415_100044952 3300032126 Bacteria 2957
151 Ga0373934_0056721 3300035086 Bacteria 1558
152 Ga0373941_0010043 3300035115 Bacteria 2404
153 Ga0373931_0120214 3300035691 Bacteria 1501
154 Ga0373925_0588778 3300037068 Bacteria 916
155 Ga0395900_0105878 3300037418 Bacteria 2889
156 Ga0436364_1024752 3300037853 Bacteria 34079
157 Ga0436365_1736450 3300039437 Bacteria 944
158 Ga0439459_0018985 3300042438 Bacteria 1298
159 Ga0466963_0225891 3300044694 Bacteria 1312
160 Ga0466968_0083951 3300044735 Bacteria 1404
161 Ga0466967_0247679 3300045976 Bacteria 1701
162 Ga0495603_0102942 3300046455 Bacteria 1666
163 Ga0495651_0000641 3300046462 Bacteria 27005
164 Ga0495653_0000532 3300046463 Bacteria 29172
165 Ga0495580_0111548 3300046472 Bacteria 1899
166 Ga0495639_0294312 3300046475 Bacteria 809
167 Ga0495608_0003921 3300046511 Bacteria 10701
168 Ga0495608_0417790 3300046511 Bacteria 819
169 Ga0495630_0001665 3300046517 Bacteria 15467
170 Ga0495630_0141575 3300046517 Bacteria 1829
171 Ga0495666_0006189 3300046526 Bacteria 6023
172 Ga0495652_0001336 3300046529 Bacteria 27452
173 Ga0495640_0002304 3300046533 Bacteria 15316
174 Ga0495640_0092214 3300046533 Bacteria 1998
175 Ga0495587_0000512 3300046536 Bacteria 26945
176 Ga0495667_0001063 3300046559 Bacteria 17859
177 Ga0495634_0001377 3300046642 Bacteria 21944
178 Ga0495635_0000455 3300046663 Bacteria 25907
179 Ga0495657_0001675 3300046675 Bacteria 18995
180 Ga0495599_0000308 3300046678 Bacteria 29564
181 Ga0495623_0000694 3300046679 Bacteria 22387
182 Ga0495613_0004095 3300046689 Bacteria 10897
183 Ga0495600_0009860 3300046809 Bacteria 5910
184 Ga0495604_0010348 3300047317 Bacteria 7388
185 Ga0495604_0255125 3300047317 Bacteria 1194
186 Ga0495674_0005266 3300047319 Bacteria 12405
187 Ga0495675_0004022 3300047444 Bacteria 8912
188 Ga0495684_0000903 3300047471 Bacteria 24073
189 Ga0495602_0001348 3300048088 Bacteria 24232
190 Ga0496100_0138322 3300048903 Bacteria 1723
191 Ga0496100_0227922 3300048903 Bacteria 1370
192 Ga0496100_0307301 3300048903 Bacteria 1188
193 Ga0496101_0039164 3300048904 Bacteria 3369
194 Ga0496101_0241577 3300048904 Bacteria 1406
195 Ga0496102_0286856 3300048905 Bacteria 1551
196 Ga0496102_0411499 3300048905 Bacteria 1271
197 Ga0496102_0694792 3300048905 Bacteria 940
198 Ga0496102_0958814 3300048905 Bacteria 776
199 Ga0496104_0003738 3300048907 Bacteria 13144
200 Ga0496104_0003994 3300048907 Bacteria 12775
201 Ga0496104_0136433 3300048907 Bacteria 2357
202 Ga0496104_0150377 3300048907 Bacteria 2235
203 Ga0496104_0298963 3300048907 Bacteria 1522
204 Ga0496105_0023964 3300048908 Bacteria 4957
205 Ga0496105_0032007 3300048908 Bacteria 4313
206 Ga0496106_0258398 3300048909 Bacteria 1393
207 Ga0496107_0100382 3300048910 Bacteria 2122
208 Ga0496108_0029789 3300048911 Bacteria 4522
209 Ga0496108_0036054 3300048911 Bacteria 4113
210 Ga0496108_0125914 3300048911 Bacteria 2199
211 Ga0496108_0310304 3300048911 Bacteria 1374
212 Ga0496109_0012574 3300048912 Bacteria 7307
213 Ga0496109_0020690 3300048912 Bacteria 5812
214 Ga0496109_0048441 3300048912 Bacteria 3866
215 Ga0496109_0193278 3300048912 Bacteria 1912
216 Ga0496109_0521255 3300048912 Bacteria 1122
217 Ga0496109_0861090 3300048912 Unclassified 844
218 Ga0496110_0005367 3300048913 Bacteria 10042
219 Ga0496110_0041466 3300048913 Bacteria 4017
220 Ga0496110_0059998 3300048913 Bacteria 3354
221 Ga0496110_0282593 3300048913 Bacteria 1511
222 Ga0496111_0007195 3300048914 Bacteria 7275
223 Ga0496111_0022366 3300048914 Bacteria 4425
224 Ga0496111_0101372 3300048914 Bacteria 2115
225 Ga0496112_0002322 3300048915 Bacteria 15267
226 Ga0496112_0005407 3300048915 Bacteria 11041
227 Ga0496112_0082308 3300048915 Bacteria 3183
228 Ga0496112_0384758 3300048915 Bacteria 1344
229 Ga0496113_0003332 3300048916 Bacteria 9595
230 Ga0496113_0016621 3300048916 Bacteria 5087
231 Ga0496113_0044826 3300048916 Bacteria 3277
232 Ga0496113_0305568 3300048916 Bacteria 1274
233 Ga0496113_0382061 3300048916 Bacteria 1130
234 Ga0496115_0061686 3300048918 Bacteria 3023
235 Ga0496126_0091973 3300048929 Bacteria 2666
236 Ga0496126_0203611 3300048929 Bacteria 1670
237 Ga0501031_0194205 3300049568 Bacteria 1325
238 Ga0501042_0061826 3300049578 Bacteria 2675
239 Ga0501047_0452548 3300049581 Bacteria 1113
240 Ga0501067_0021465 3300049583 Bacteria 3573
241 Ga0501067_0095161 3300049583 Bacteria 1654
242 Ga0501069_0038852 3300049585 Bacteria 2628
243 Ga0501071_0211358 3300049587 Bacteria 1459
244 Ga0501071_0501043 3300049587 Bacteria 932
245 Ga0501075_0143671 3300049591 Bacteria 1819
246 Ga0501076_0637303 3300049592 Bacteria 879
247 Ga0501079_0278028 3300049741 Bacteria 1309
248 Ga0501045_0072215 3300049824 Bacteria 2541
249 Ga0501045_0080759 3300049824 Bacteria 2398
250 nmdc:mga03683_12498_c1 3300050489 Bacteria 3103
251 nmdc:mga03683_185255_c1 3300050489 Bacteria 951
252 nmdc:mga03n38_53038_c1 3300050490 Bacteria 1817
253 nmdc:mga00v17_10478_c1 3300050491 Bacteria 5063
254 nmdc:mga00v17_139864_c1 3300050491 Bacteria 1551
255 nmdc:mga00v17_341414_c1 3300050491 Bacteria 973
256 nmdc:mga00v17_6970_c1 3300050491 Bacteria 6013
257 nmdc:mga0yw44_2449_c1 3300050492 Bacteria 7918
258 nmdc:mga0yw44_4130_c1 3300050492 Bacteria 6591
259 nmdc:mga0yw44_5992_c1 3300050492 Bacteria 5820
260 nmdc:mga06z11_44001_c1 3300050494 Bacteria 2249
261 nmdc:mga07m45_51253_c1 3300050496 Bacteria 878
262 nmdc:mga0qj67_360411_c1 3300050509 Bacteria 1175
263 Ga0495601_0070896 3300053077 Bacteria 2225
264 Ga0495601_0304232 3300053077 Bacteria 1038
265 Ga0495655_0098094 3300053083 Bacteria 864
266 Ga0495619_0047826 3300053085 Bacteria 2818
267 Ga0495619_0203055 3300053085 Bacteria 1372
268 Ga0495619_0213569 3300053085 Bacteria 1336
269 Ga0500616_0028214 3300053153 Bacteria 3094
270 2906611712
271 2932792820 2932784394 Bacteria 9704911
272 2941537504 2941531003 Bacteria 7653939
273 8006971983 8006964411 Bacteria 8966052
274 Ga0207678_10263089
275 SwRhRL2b_contig_2017935
276 JGI25406J46586_10019055
277 Ga0065704_10071024
278 Ga0065707_10015655
279 Ga0065707_10082145
280 Ga0070683_100045625
281 Ga0070683_100870748
282 Ga0070670_100011169
283 Ga0070691_10168940
284 Ga0070661_100381107
285 Ga0070674_100205575
286 Ga0070674_100661262
287 Ga0070667_100154906
288 Ga0070714_100540927
289 Ga0070713_100170464
290 Ga0070708_100002133
291 Ga0070708_100064693
292 Ga0070708_100277862
293 Ga0070708_100587793
294 Ga0070663_100041716
295 Ga0070681_10011288
296 Ga0070681_10058080
297 Ga0070706_100143080
298 Ga0070706_100513811
299 Ga0070707_100023428
300 Ga0070707_100160082
301 Ga0070707_100178015
302 Ga0070698_100005237
303 Ga0070698_100013592
304 Ga0070698_100410796
305 Ga0070698_100946281
306 Ga0070699_100047406
307 Ga0070699_100235127
308 Ga0070699_100346900
309 Ga0070697_100044382
310 Ga0070697_100172733
311 Ga0070672_100753555
312 Ga0070686_100117688
313 Ga0070696_100023182
314 Ga0070665_100011100
315 Ga0070665_100347322
316 Ga0070704_100490833
317 Ga0068855_100060100
318 Ga0070664_100304459
319 Ga0068856_100410530
320 Ga0068859_100414631
321 Ga0068864_100007963
322 Ga0068864_100953861
323 Ga0068863_100023302
324 Ga0068860_100066130
325 Ga0081455_10000368
326 Ga0081540_1051087
327 Ga0081539_10191346
328 Ga0075365_10006304
329 Ga0075365_10007371
330 Ga0075365_10016626
331 Ga0075365_10030525
332 Ga0075368_10069699
333 Ga0075363_100040283
334 Ga0075364_10000918
335 Ga0075364_10004744
336 Ga0075364_10009610
337 Ga0075364_10012963
338 Ga0070712_100003417
339 Ga0075362_10004884
340 Ga0075362_10015407
341 Ga0075367_10053102
342 Ga0075367_10151661
343 Ga0075369_10037904
344 Ga0075431_100314210
345 Ga0097620_100414594
346 Ga0099794_10094466
347 Ga0099795_10195198
348 Ga0114129_10030350
349 Ga0105243_10023425
350 Ga0105242_10305021
351 Ga0105248_10017421
352 Ga0105248_10601253
353 Ga0105238_10600003
354 Ga0105249_10338498
355 Ga0105249_10614173
356 Ga0163162_10140571
357 Ga0157375_10100618
358 Ga0163163_10028043
359 Ga0163163_10333344
360 Ga0157380_10162201
361 Ga0157379_10250724
362 Ga0157379_10333643
363 Ga0157379_10841582
364 Ga0213876_10116197
365 Ga0213875_10022574
366 Ga0209676_1000065
367 Ga0209758_1011139
368 Ga0207692_10048608
369 Ga0207692_10157755
370 Ga0207688_10165856
371 Ga0207685_10242062
372 Ga0207699_10240124
373 Ga0207645_10157370
374 Ga0207684_10023385
375 Ga0207684_10052370
376 Ga0207684_10296437
377 Ga0207707_10012054
378 Ga0207707_10044251
379 Ga0207693_10012753
380 Ga0207646_10107778
381 Ga0207646_10132302
382 Ga0207646_10222230
383 Ga0207650_10037392
384 Ga0207650_10326536
385 Ga0207687_10087034
386 Ga0207687_10288402
387 Ga0207664_10769502
388 Ga0207690_10047429
389 Ga0207706_10346056
390 Ga0207706_10618487
391 Ga0207686_10273652
392 Ga0207709_10030096
393 Ga0207669_10603280
394 Ga0207704_10351030
395 Ga0207667_10304639
396 Ga0207712_10085922
397 Ga0207712_10522929
398 Ga0207703_10422534
399 Ga0207678_10031893
400 Ga0207641_10035283
401 Ga0207676_10034065
402 Ga0207676_10153728
403 Ga0207675_100283597
404 Ga0207683_10028206
405 Ga0207683_10049395
406 Ga0268266_10041534
407 Ga0268266_10048143
408 Ga0268266_10062740
409 Ga0268265_10258116
410 Ga0268264_10062517
411 Ga0265760_10052087
412 Ga0265330_10016093
413 Ga0265325_10118191
414 Ga0265316_10245680
415 Ga0265342_10071082
416 Ga0307405_10007918
417 Ga0307406_10005660
418 Ga0307407_10002627
419 Ga0307409_100000693
420 Ga0307416_100018136
421 Ga0307415_100000303
422 Ga0307415_100039748
423 Ga0307415_100044952
424 Ga0373934_0056721
425 Ga0373941_0010043
426 Ga0373931_0120214
427 Ga0373925_0588778
428 Ga0395900_0105878
429 Ga0436364_1024752
430 Ga0436365_1736450
431 Ga0439459_0018985
432 Ga0466963_0225891
433 Ga0466968_0083951
434 Ga0466967_0247679
435 Ga0495603_0102942
436 Ga0495651_0000641
437 Ga0495653_0000532
438 Ga0495580_0111548
439 Ga0495639_0294312
440 Ga0495608_0003921
441 Ga0495608_0417790
442 Ga0495630_0001665
443 Ga0495630_0141575
444 Ga0495666_0006189
445 Ga0495652_0001336
446 Ga0495640_0002304
447 Ga0495640_0092214
448 Ga0495587_0000512
449 Ga0495667_0001063
450 Ga0495634_0001377
451 Ga0495635_0000455
452 Ga0495657_0001675
453 Ga0495599_0000308
454 Ga0495623_0000694
455 Ga0495613_0004095
456 Ga0495600_0009860
457 Ga0495604_0010348
458 Ga0495604_0255125
459 Ga0495674_0005266
460 Ga0495675_0004022
461 Ga0495684_0000903
462 Ga0495602_0001348
463 Ga0496100_0138322
464 Ga0496100_0227922
465 Ga0496100_0307301
466 Ga0496101_0039164
467 Ga0496101_0241577
468 Ga0496102_0286856
469 Ga0496102_0411499
470 Ga0496102_0694792
471 Ga0496102_0958814
472 Ga0496104_0003738
473 Ga0496104_0003994
474 Ga0496104_0136433
475 Ga0496104_0150377
476 Ga0496104_0298963
477 Ga0496105_0023964
478 Ga0496105_0032007
479 Ga0496106_0258398
480 Ga0496107_0100382
481 Ga0496108_0029789
482 Ga0496108_0036054
483 Ga0496108_0125914
484 Ga0496108_0310304
485 Ga0496109_0012574
486 Ga0496109_0020690
487 Ga0496109_0048441
488 Ga0496109_0193278
489 Ga0496109_0521255
490 Ga0496109_0861090
491 Ga0496110_0005367
492 Ga0496110_0041466
493 Ga0496110_0059998
494 Ga0496110_0282593
495 Ga0496111_0007195
496 Ga0496111_0022366
497 Ga0496111_0101372
498 Ga0496112_0002322
499 Ga0496112_0005407
500 Ga0496112_0082308
501 Ga0496112_0384758
502 Ga0496113_0003332
503 Ga0496113_0016621
504 Ga0496113_0044826
505 Ga0496113_0305568
506 Ga0496113_0382061
507 Ga0496115_0061686
508 Ga0496126_0091973
509 Ga0496126_0203611
510 Ga0501031_0194205
511 Ga0501042_0061826
512 Ga0501047_0452548
513 Ga0501067_0021465
514 Ga0501067_0095161
515 Ga0501069_0038852
516 Ga0501071_0211358
517 Ga0501071_0501043
518 Ga0501075_0143671
519 Ga0501076_0637303
520 Ga0501079_0278028
521 Ga0501045_0072215
522 Ga0501045_0080759
523 nmdc:mga03683_12498_c1
524 nmdc:mga03683_185255_c1
525 nmdc:mga03n38_53038_c1
526 nmdc:mga00v17_10478_c1
527 nmdc:mga00v17_139864_c1
528 nmdc:mga00v17_341414_c1
529 nmdc:mga00v17_6970_c1
530 nmdc:mga0yw44_2449_c1
531 nmdc:mga0yw44_4130_c1
532 nmdc:mga0yw44_5992_c1
533 nmdc:mga06z11_44001_c1
534 nmdc:mga07m45_51253_c1
535 nmdc:mga0qj67_360411_c1
536 Ga0495601_0070896
537 Ga0495601_0304232
538 Ga0495655_0098094
539 Ga0495619_0047826
540 Ga0495619_0203055
541 Ga0495619_0213569
542 Ga0500616_0028214
543 2906611712
544 2932792820
545 2941537504
546 8006971983

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

46

192

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ji0-assembly1.cif.gz_A crystal structure analysis of the abc transporter from thermotoga maritima 0.9814 1 235
1ji0-assembly1.cif.gz_A crystal structure analysis of the abc transporter from thermotoga maritima 0.9773 1 235
2awo-assembly2.cif.gz_D crystal structure of the adp-mg-bound e. coli malk (crystallized with adp-mg) 0.9359 1 226
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.9295 1 232
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9276 2 223
ID Description Score Start End Superfamily
af_P22731_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9895 1 235 3.40.50.300
af_P22731_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9812 1 235 3.40.50.300
1ji0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9768 1 235 3.40.50.300
af_Q58664_1_235_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9622 3 234 3.40.50.300
1ji0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9561 1 235 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3B8HPL4-F1-model_v4 ABC transporter ATP-binding protein 0.9965 142 235 GO:0005524
GO:0015658
GO:0015807
AF-A0A417Z7G5-F1-model_v4 ABC transporter ATP-binding protein 0.9941 2 235 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A351AAV7-F1-model_v4 ABC transporter ATP-binding protein 0.9938 9 194 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A535SRT7-F1-model_v4 ATP-binding cassette domain-containing protein 0.9907 137 235 GO:0005524
GO:0015658
GO:0015807
GO:0016887
AF-A0A7C2W4W1-F1-model_v4 ABC transporter ATP-binding protein 0.9902 40 235 GO:0005524
GO:0015658
GO:0015807
GO:0016887

Map