F378516

General Info

Members Datasets Scaffolds Average Seq Length
272 210 205 430

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0382187|Ga0436361_0382187_320_1717
Length 465
Sequence MTEPASARPASPAAEFATGTPRLSAVDVVAVILGNALEFYDFTVYAAFAVMIGKAFFPTQGPAGALLLSVATFGVGFVTRPLGGIIIGAYADRRGRKAAMTLTIWLMALGSGMIAVLPGYATIGWAAPALLVVARLIQGFSAGGEMGPATTYLVEAAPGKRRAFYGAWQLASQNAGVLLSGLFGFLLAEALPTDAIEGWAWRVPFLLGILIAPVGLRIRNRLSETLDAKTAHSSAGQVLSDLVRHHGRALLLSFLLIPGGTVTQYFLGYTTTFAIATLHMPTNIAMLGGLTVGASGAVFAIVGGLLADRWGVKALALWPRVLLTLIAYPAVLLVVQQRTTGTLLGVMGLLMALQAMSGAMAIVLIARVLPAAVRTAGLSIAYALAVTLFGGTAQVVFTWLIQHTGDPLSPLSWVIAVNIVTLAATLALRPAPGAGRRPDGRASVATHLSKIRIFKDLIGRRRMNN

Samples

Sample ID Description Type Environment
1 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2511231006 Pseudomonas sp. GM17 Isolate Nodule
3 2519103095 Burkholderia sp. KJ006 Isolate Nodule
4 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
5 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
6 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
7 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
8 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
9 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
10 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
11 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
12 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
13 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
14 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
15 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
16 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
17 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
18 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
19 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
20 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
21 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
22 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
23 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
24 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
25 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
26 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
27 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
28 2818991452 Burkholderia cepacia 561 Isolate Unclassified
29 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
30 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
31 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
32 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
33 2858950400 Achromobacter sp. K91 Isolate Unclassified
34 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
35 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
36 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
37 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
38 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
39 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
40 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
41 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
42 2902330777 Methylobacterium sp. 2A Isolate Unclassified
43 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
44 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
45 2904564687 Burkholderia sp. 571 Isolate Unclassified
46 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
47 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
48 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
49 2928163908 Burkholderia sp. 567 Isolate Unclassified
50 2928170801 Burkholderia sp. 572 Isolate Unclassified
51 2928536128 Burkholderia sola 565 Isolate Unclassified
52 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
53 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
54 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
55 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
56 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
57 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
58 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
59 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
60 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
61 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
62 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
63 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
64 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
65 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
66 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
67 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
68 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
69 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
70 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
71 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
72 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
73 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
74 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
83 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
90 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
118 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
126 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
136 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
137 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
138 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
147 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
148 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
149 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
153 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
154 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
159 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
160 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
166 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
171 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
188 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
189 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
190 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
191 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
192 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
193 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
195 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
196 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
200 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
201 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
202 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
203 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
204 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
205 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
206 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
207 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
208 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere
209 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule
210 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.37
Metatranscriptomes 0
Isolates 24.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 1.84
Rhizoplane 3.31
Rhizosphere 63.6
Stem 0
Stem Tuber 0
Unclassified 18.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10074072 3300003320 Bacteria 4772
2 Ga0055532_1001253 3300003758 Bacteria 7450
3 Ga0055532_1001835 3300003758 Bacteria 5221
4 Ga0055532_1001843 3300003758 Bacteria 5207
5 Ga0055527_1000167 3300003760 Bacteria 45193
6 Ga0055527_1000195 3300003760 Bacteria 40416
7 Ga0055535_1000382 3300003761 Bacteria 41904
8 Ga0055535_1000409 3300003761 Bacteria 40416
9 Ga0055542_1000408 3300003762 Bacteria 41982
10 Ga0055542_1001289 3300003762 Bacteria 13459
11 Ga0055542_1004898 3300003762 Bacteria 3122
12 Ga0055529_1000436 3300003763 Bacteria 41951
13 Ga0055529_1004625 3300003763 Bacteria 2072
14 Ga0055528_1001311 3300003790 Bacteria 15602
15 Ga0065165_1001882 3300005262 Bacteria 20268
16 Ga0065704_10088514 3300005289 Bacteria 2933
17 Ga0070658_10057086 3300005327 Bacteria 3175
18 Ga0070683_100003410 3300005329 Bacteria 12889
19 Ga0070660_100000013 3300005339 Bacteria 116814
20 Ga0070659_100000028 3300005366 Bacteria 140665
21 Ga0070667_100136750 3300005367 Bacteria 2143
22 Ga0070684_100001930 3300005535 Bacteria 15207
23 Ga0068855_100079518 3300005563 Bacteria 3802
24 Ga0068855_100185432 3300005563 Bacteria 2350
25 Ga0068857_100247489 3300005577 Bacteria 1633
26 Ga0068856_100340182 3300005614 Bacteria 1519
27 Ga0068852_100262171 3300005616 Bacteria 1660
28 Ga0081540_1044232 3300005983 Bacteria 2275
29 Ga0105240_10000885 3300009093 Bacteria 53803
30 Ga0105240_10012920 3300009093 Bacteria 11500
31 Ga0105240_10135100 3300009093 Bacteria 2954
32 Ga0105241_10080393 3300009174 Bacteria 2551
33 Ga0105238_10013704 3300009551 Bacteria 8189
34 Ga0105239_10202325 3300010375 Bacteria 2225
35 Ga0105239_10303215 3300010375 Bacteria 1799
36 Ga0163162_10006575 3300013306 Bacteria 11264
37 Ga0182008_10003293 3300014497 Bacteria 9828
38 Ga0157379_10089762 3300014968 Bacteria 2757
39 Ga0213872_10005054 3300021361 Bacteria 6839
40 Ga0209672_100067 3300025228 Bacteria 180819
41 Ga0209672_100079 3300025228 Bacteria 156875
42 Ga0209147_100012 3300025229 Bacteria 681990
43 Ga0209147_100061 3300025229 Bacteria 248809
44 Ga0209147_100107 3300025229 Bacteria 156875
45 Ga0209258_100107 3300025242 Bacteria 206572
46 Ga0209258_100273 3300025242 Bacteria 87726
47 Ga0209148_1000022 3300025254 Bacteria 681990
48 Ga0209148_1000192 3300025254 Bacteria 115724
49 Ga0209148_1002005 3300025254 Bacteria 7983
50 Ga0209455_1000024 3300025272 Bacteria 676133
51 Ga0209455_1000300 3300025272 Bacteria 51031
52 Ga0209455_1000892 3300025272 Bacteria 15629
53 Ga0209673_1000021 3300025273 Bacteria 422978
54 Ga0209025_1000029 3300025294 Bacteria 488571
55 Ga0209564_1007871 3300025295 Bacteria 5395
56 Ga0207426_1002230 3300025302 Bacteria 12929
57 Ga0209051_1011623 3300025303 Bacteria 4328
58 Ga0207705_10135927 3300025909 Bacteria 1833
59 Ga0207654_10018076 3300025911 Bacteria 3696
60 Ga0207695_10013953 3300025913 Bacteria 9550
61 Ga0207657_10000017 3300025919 Bacteria 173373
62 Ga0207694_10052320 3300025924 Bacteria 3166
63 Ga0207690_10000009 3300025932 Bacteria 366044
64 Ga0207661_10000349 3300025944 Bacteria 29687
65 Ga0207667_10022620 3300025949 Bacteria 6938
66 Ga0207667_10056463 3300025949 Bacteria 4125
67 Ga0207678_10015710 3300026067 Bacteria 6653
68 Ga0207674_10135146 3300026116 Bacteria 2428
69 Ga0209371_1000961 3300027312 Bacteria 22360
70 Ga0265338_10001259 3300028800 Bacteria 41748
71 Ga0268256_1000809 3300030500 Bacteria 22398
72 Ga0395898_0145426 3300037466 Bacteria 2269
73 Ga0395905_0002173 3300037471 Bacteria 22181
74 Ga0395905_0073666 3300037471 Bacteria 3201
75 Ga0436364_1356723 3300037853 Bacteria 99137
76 Ga0436361_0160870 3300039447 Bacteria 2398
77 Ga0436361_0259465 3300039447 Bacteria 6884
78 Ga0436361_0382187 3300039447 Bacteria 2653
79 Ga0439440_0000696 3300042993 Bacteria 5774
80 Ga0466972_0005960 3300044658 Bacteria 6120
81 Ga0466965_0002003 3300044683 Bacteria 8526
82 Ga0466968_0049183 3300044735 Bacteria 1795
83 Ga0466970_0010608 3300044765 Bacteria 4679
84 Ga0466960_0001044 3300044901 Bacteria 9917
85 Ga0466958_0085482 3300045836 Bacteria 1946
86 Ga0495592_0001844 3300046454 Bacteria 14905
87 Ga0495592_0165339 3300046454 Bacteria 1519
88 Ga0495591_000325 3300046458 Bacteria 43149
89 Ga0495629_0002254 3300046459 Bacteria 14859
90 Ga0495651_0063003 3300046462 Bacteria 2835
91 Ga0495653_0051018 3300046463 Bacteria 3178
92 Ga0495650_0032499 3300046471 Bacteria 2332
93 Ga0495580_0000397 3300046472 Bacteria 35621
94 Ga0495580_0000979 3300046472 Bacteria 25039
95 Ga0495580_0044872 3300046472 Bacteria 3142
96 Ga0495664_0004885 3300046477 Bacteria 7337
97 Ga0495596_0000235 3300046500 Bacteria 37669
98 Ga0495606_0006701 3300046507 Bacteria 10553
99 Ga0495606_0024071 3300046507 Bacteria 4399
100 Ga0495608_0000338 3300046511 Bacteria 32882
101 Ga0495618_0001764 3300046514 Bacteria 14353
102 Ga0495628_0028185 3300046516 Bacteria 4564
103 Ga0495630_0002533 3300046517 Bacteria 12676
104 Ga0495648_0000906 3300046524 Bacteria 30945
105 Ga0495648_0048420 3300046524 Bacteria 2616
106 Ga0495666_0006567 3300046526 Bacteria 5850
107 Ga0495652_0159471 3300046529 Bacteria 1753
108 Ga0495665_0000428 3300046531 Bacteria 21430
109 Ga0495640_0005881 3300046533 Bacteria 9729
110 Ga0495587_0006730 3300046536 Bacteria 7484
111 Ga0495645_0001178 3300046543 Bacteria 17825
112 Ga0495645_0101205 3300046543 Bacteria 2049
113 Ga0495622_0000029 3300046557 Bacteria 130861
114 Ga0495635_0000181 3300046663 Bacteria 39744
115 Ga0495661_0001284 3300046665 Bacteria 21502
116 Ga0495599_0026566 3300046678 Bacteria 3628
117 Ga0495623_0027608 3300046679 Bacteria 3653
118 Ga0495646_0009723 3300046680 Bacteria 6106
119 Ga0495669_0007141 3300046684 Bacteria 4679
120 Ga0495613_0002115 3300046689 Bacteria 15081
121 Ga0495624_0011671 3300046690 Bacteria 6033
122 Ga0495624_0078272 3300046690 Bacteria 2051
123 Ga0495649_0028367 3300046694 Bacteria 3102
124 Ga0495589_0000568 3300046794 Bacteria 25477
125 Ga0495600_0013645 3300046809 Bacteria 5111
126 Ga0495600_0038726 3300046809 Bacteria 3103
127 Ga0495604_0056867 3300047317 Bacteria 3008
128 Ga0495674_0011810 3300047319 Bacteria 8235
129 Ga0495674_0041558 3300047319 Bacteria 4106
130 Ga0495676_0005894 3300047321 Bacteria 11250
131 Ga0495680_0024614 3300047322 Bacteria 4992
132 Ga0495683_0013042 3300047323 Bacteria 4352
133 Ga0495683_0027063 3300047323 Bacteria 2933
134 Ga0495675_0006666 3300047444 Bacteria 7073
135 Ga0495673_0013783 3300047469 Bacteria 4228
136 Ga0495686_0000044 3300047472 Bacteria 288079
137 Ga0495686_0097359 3300047472 Bacteria 1779
138 Ga0495593_0013325 3300047673 Bacteria 4692
139 Ga0495602_0051726 3300048088 Bacteria 3656
140 Ga0495614_0002944 3300048089 Bacteria 7586
141 Ga0496105_0198345 3300048908 Bacteria 1639
142 Ga0496118_0062552 3300048921 Bacteria 2746
143 Ga0496120_0002880 3300048923 Bacteria 16488
144 Ga0496121_0000141 3300048924 Bacteria 161556
145 Ga0496121_0000207 3300048924 Bacteria 129797
146 Ga0496121_0020252 3300048924 Bacteria 6596
147 Ga0496121_0041494 3300048924 Bacteria 4020
148 Ga0496122_0000186 3300048925 Bacteria 144012
149 Ga0496123_0000162 3300048926 Bacteria 134316
150 Ga0496123_0008807 3300048926 Bacteria 9201
151 Ga0496124_0095469 3300048927 Bacteria 2416
152 Ga0496125_0000023 3300048928 Bacteria 449042
153 Ga0496125_0057335 3300048928 Bacteria 3155
154 Ga0496126_0001371 3300048929 Bacteria 38523
155 Ga0496126_0003951 3300048929 Bacteria 18141
156 Ga0496126_0015904 3300048929 Bacteria 7554
157 Ga0496126_0017087 3300048929 Bacteria 7235
158 Ga0496126_0047051 3300048929 Bacteria 3951
159 Ga0495682_0020075 3300049460 Bacteria 2510
160 Ga0501031_0008800 3300049568 Bacteria 6565
161 Ga0501032_0000048 3300049569 Bacteria 106326
162 Ga0501032_0104042 3300049569 Bacteria 1881
163 Ga0501033_0000499 3300049570 Bacteria 36923
164 Ga0501033_0056961 3300049570 Bacteria 2888
165 Ga0501034_0029171 3300049571 Bacteria 5609
166 Ga0501034_0034084 3300049571 Bacteria 5161
167 Ga0501036_0000020 3300049572 Bacteria 115993
168 Ga0501037_0000063 3300049573 Bacteria 97745
169 Ga0501037_0041567 3300049573 Bacteria 3381
170 Ga0501038_0000445 3300049574 Bacteria 36058
171 Ga0501038_0045875 3300049574 Bacteria 3792
172 Ga0501039_0002359 3300049575 Bacteria 14061
173 Ga0501043_0000241 3300049579 Bacteria 49410
174 Ga0501046_0007333 3300049580 Bacteria 9702
175 Ga0501047_0000503 3300049581 Bacteria 42315
176 Ga0501047_0003424 3300049581 Bacteria 14997
177 Ga0501047_0036880 3300049581 Bacteria 4725
178 Ga0501048_0039517 3300049582 Bacteria 3384
179 Ga0501067_0000182 3300049583 Bacteria 35709
180 Ga0501068_0003607 3300049584 Bacteria 8369
181 Ga0501069_0001686 3300049585 Bacteria 10985
182 Ga0501069_0002322 3300049585 Bacteria 9610
183 Ga0501070_0001041 3300049586 Bacteria 24980
184 Ga0501070_0022374 3300049586 Bacteria 5294
185 Ga0501070_0024898 3300049586 Bacteria 5019
186 Ga0501072_0019203 3300049588 Bacteria 5280
187 Ga0501073_0083408 3300049589 Bacteria 2224
188 Ga0501073_0109301 3300049589 Bacteria 1918
189 Ga0501074_0029624 3300049590 Bacteria 3965
190 Ga0501074_0033807 3300049590 Bacteria 3707
191 Ga0501074_0050384 3300049590 Bacteria 3006
192 Ga0501076_0152783 3300049592 Bacteria 1878
193 Ga0501080_0045241 3300049742 Bacteria 4097
194 Ga0501080_0210568 3300049742 Bacteria 1781
195 Ga0501083_0003099 3300049744 Bacteria 11559
196 Ga0501035_0000202 3300049822 Bacteria 72570
197 Ga0501035_0000346 3300049822 Bacteria 53542
198 Ga0501035_0128220 3300049822 Bacteria 2213
199 Ga0501044_0000648 3300049823 Bacteria 42049
200 Ga0501044_0003296 3300049823 Bacteria 18187
201 Ga0501044_0095574 3300049823 Bacteria 2994
202 nmdc:mga06z11_138506_c1 3300050494 Bacteria 1373
203 Ga0500595_020736 3300053119 Bacteria 2358
204 Ga0501084_0083842 3300054114 Bacteria 2675
205 Ga0501082_0014063 3300060353 Bacteria 6884

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300010375 Ga0105239_10202325 Ga0105239_102023253 329
2 3300003762 Ga0055542_1004898 Ga0055542_10048983 374
3 3300005616 Ga0068852_100262171 Ga0068852_1002621712 375
4 3300009174 Ga0105241_10080393 Ga0105241_100803932 375
5 3300010375 Ga0105239_10303215 Ga0105239_103032152 375
6 3300046507 Ga0495606_0024071 Ga0495606_0024071_2720_4003 376
7 3300048929 Ga0496126_0047051 Ga0496126_0047051_18_1301 376
8 3300025254 Ga0209148_1000192 Ga0209148_100019285 380
9 3300025272 Ga0209455_1000892 Ga0209455_10008926 380
10 3300025911 Ga0207654_10018076 Ga0207654_100180762 381
11 3300046454 Ga0495592_0165339 Ga0495592_0165339_181_1461 381
12 3300046529 Ga0495652_0159471 Ga0495652_0159471_360_1640 381
13 3300005563 Ga0068855_100185432 Ga0068855_1001854322 382
14 3300025949 Ga0207667_10056463 Ga0207667_100564634 382
15 3300053119 Ga0500595_020736 Ga0500595_020736_1059_2342 382
16 3300048924 Ga0496121_0041494 Ga0496121_0041494_1980_3335 383
17 3300048923 Ga0496120_0002880 Ga0496120_0002880_10924_12255 386
18 3300048926 Ga0496123_0008807 Ga0496123_0008807_4744_6075 386
19 3300048928 Ga0496125_0000023 Ga0496125_0000023_53032_54363 386
20 3300048929 Ga0496126_0015904 Ga0496126_0015904_3601_4932 386
21 3300005367 Ga0070667_100136750 Ga0070667_1001367502 388
22 3300046543 Ga0495645_0101205 Ga0495645_0101205_72_1307 389
23 3300048921 Ga0496118_0062552 Ga0496118_0062552_1341_2672 389
24 3300048924 Ga0496121_0000141 Ga0496121_0000141_133175_134530 391
25 3300048924 Ga0496121_0000207 Ga0496121_0000207_5233_6534 391
26 3300048929 Ga0496126_0001371 Ga0496126_0001371_14330_15685 391
27 3300048929 Ga0496126_0003951 Ga0496126_0003951_5304_6605 391
28 3300014968 Ga0157379_10089762 Ga0157379_100897623 396
29 3300037471 Ga0395905_0073666 Ga0395905_0073666_824_2107 398
30 3300049570 Ga0501033_0056961 Ga0501033_0056961_777_2039 399
31 3300049581 Ga0501047_0003424 Ga0501047_0003424_8394_9656 399
32 3300049585 Ga0501069_0001686 Ga0501069_0001686_7496_8758 399
33 3300049586 Ga0501070_0001041 Ga0501070_0001041_12971_14233 399
34 3300049590 Ga0501074_0050384 Ga0501074_0050384_1162_2424 399
35 3300049822 Ga0501035_0000346 Ga0501035_0000346_2045_3307 399
36 3300049823 Ga0501044_0003296 Ga0501044_0003296_10345_11607 399
37 3300037471 Ga0395905_0002173 Ga0395905_0002173_1057_2478 400
38 3300050494 nmdc:mga06z11_138506_c1 nmdc:mga06z11_138506_c1_26_1306 400
39 iso_pu_bacteria 2510917013 2511091348 400
40 3300021361 Ga0213872_10005054 Ga0213872_100050543 403
41 3300039447 Ga0436361_0259465 Ga0436361_0259465_2061_3383 403
42 3300048924 Ga0496121_0020252 Ga0496121_0020252_544_1824 403
43 3300005262 Ga0065165_1001882 Ga0065165_10018827 404
44 3300025294 Ga0209025_1000029 Ga0209025_1000029410 404
45 3300025302 Ga0207426_1002230 Ga0207426_100223012 404
46 3300046454 Ga0495592_0001844 Ga0495592_0001844_8012_9319 404
47 3300046458 Ga0495591_000325 Ga0495591_000325_25333_26640 404
48 3300046459 Ga0495629_0002254 Ga0495629_0002254_6586_7893 404
49 3300046462 Ga0495651_0063003 Ga0495651_0063003_877_2184 404
50 3300046463 Ga0495653_0051018 Ga0495653_0051018_1705_3012 404
51 3300046472 Ga0495580_0044872 Ga0495580_0044872_1781_3088 404
52 3300046477 Ga0495664_0004885 Ga0495664_0004885_759_2066 404
53 3300046500 Ga0495596_0000235 Ga0495596_0000235_35150_36457 404
54 3300046511 Ga0495608_0000338 Ga0495608_0000338_26810_28117 404
55 3300046514 Ga0495618_0001764 Ga0495618_0001764_452_1759 404
56 3300046517 Ga0495630_0002533 Ga0495630_0002533_716_2023 404
57 3300046524 Ga0495648_0048420 Ga0495648_0048420_653_1960 404
58 3300046526 Ga0495666_0006567 Ga0495666_0006567_4066_5373 404
59 3300046531 Ga0495665_0000428 Ga0495665_0000428_12734_14041 404
60 3300046533 Ga0495640_0005881 Ga0495640_0005881_718_2025 404
61 3300046536 Ga0495587_0006730 Ga0495587_0006730_4064_5371 404
62 3300046557 Ga0495622_0000029 Ga0495622_0000029_26789_28093 404
63 3300046663 Ga0495635_0000181 Ga0495635_0000181_37610_38917 404
64 3300046665 Ga0495661_0001284 Ga0495661_0001284_1991_3298 404
65 3300046678 Ga0495599_0026566 Ga0495599_0026566_1855_3162 404
66 3300046679 Ga0495623_0027608 Ga0495623_0027608_1553_2860 404
67 3300046680 Ga0495646_0009723 Ga0495646_0009723_75_1382 404
68 3300046689 Ga0495613_0002115 Ga0495613_0002115_11775_13082 404
69 3300046690 Ga0495624_0011671 Ga0495624_0011671_3930_5237 404
70 3300046794 Ga0495589_0000568 Ga0495589_0000568_4059_5366 404
71 3300046809 Ga0495600_0013645 Ga0495600_0013645_2431_3738 404
72 3300047317 Ga0495604_0056867 Ga0495604_0056867_59_1366 404
73 3300047319 Ga0495674_0041558 Ga0495674_0041558_2143_3450 404
74 3300047321 Ga0495676_0005894 Ga0495676_0005894_4651_5958 404
75 3300047322 Ga0495680_0024614 Ga0495680_0024614_2271_3578 404
76 3300047323 Ga0495683_0013042 Ga0495683_0013042_2169_3476 404
77 3300047444 Ga0495675_0006666 Ga0495675_0006666_1701_3008 404
78 3300047469 Ga0495673_0013783 Ga0495673_0013783_978_2285 404
79 3300047673 Ga0495593_0013325 Ga0495593_0013325_1962_3269 404
80 3300048088 Ga0495602_0051726 Ga0495602_0051726_1681_2988 404
81 3300048089 Ga0495614_0002944 Ga0495614_0002944_3245_4552 404
82 iso_pu_bacteria 2900634093 2900640397 404
83 3300025303 Ga0209051_1011623 Ga0209051_10116233 405
84 3300028800 Ga0265338_10001259 Ga0265338_1000125927 405
85 3300046472 Ga0495580_0000397 Ga0495580_0000397_10714_11973 405
86 3300046472 Ga0495580_0000979 Ga0495580_0000979_16067_17326 405
87 3300046524 Ga0495648_0000906 Ga0495648_0000906_7247_8506 405
88 3300046543 Ga0495645_0001178 Ga0495645_0001178_16168_17427 405
89 3300047323 Ga0495683_0027063 Ga0495683_0027063_198_1457 405
90 3300048908 Ga0496105_0198345 Ga0496105_0198345_50_1309 405
91 3300049460 Ga0495682_0020075 Ga0495682_0020075_651_1979 405
92 iso_pu_bacteria 2744054900 2746090136 405
93 iso_pu_bacteria 2744054901 2746095576 405
94 iso_pu_bacteria 2824600985 2824606296 405
95 iso_pu_bacteria 2824609381 2824616084 405
96 iso_pu_bacteria 2824653114 2824658318 405
97 iso_pu_bacteria 2888419890 2888427358 405
98 iso_pu_bacteria 8056967851 8056975742 405
99 3300046471 Ga0495650_0032499 Ga0495650_0032499_703_2037 406
100 iso_pu_bacteria 2885409591 2885417693 406
101 iso_pu_bacteria 2902405164 2902411196 406
102 3300037466 Ga0395898_0145426 Ga0395898_0145426_962_2209 407
103 3300037853 Ga0436364_1356723 Ga0436364_1356723_63194_64537 407
104 3300046507 Ga0495606_0006701 Ga0495606_0006701_2444_3775 407
105 3300046684 Ga0495669_0007141 Ga0495669_0007141_1213_2544 407
106 3300046694 Ga0495649_0028367 Ga0495649_0028367_199_1530 407
107 3300049569 Ga0501032_0104042 Ga0501032_0104042_236_1537 407
108 3300049574 Ga0501038_0045875 Ga0501038_0045875_2427_3728 407
109 3300049589 Ga0501073_0083408 Ga0501073_0083408_22_1320 407
110 iso_pu_bacteria 2595698237 2596371758 407
111 iso_pu_bacteria 2861691609 2861692270 407
112 iso_pu_bacteria 2889306138 2889307098 407
113 iso_pu_bacteria 2902330777 2902336930 407
114 iso_pu_bacteria 2928125067 2928128020 407
115 iso_pu_bacteria 3003665799 3003670170 407
116 3300039447 Ga0436361_0160870 Ga0436361_0160870_955_2190 408
117 3300044658 Ga0466972_0005960 Ga0466972_0005960_2595_3911 408
118 3300044683 Ga0466965_0002003 Ga0466965_0002003_1017_2333 408
119 3300044765 Ga0466970_0010608 Ga0466970_0010608_2187_3503 408
120 3300044901 Ga0466960_0001044 Ga0466960_0001044_6266_7582 408
121 3300045836 Ga0466958_0085482 Ga0466958_0085482_385_1701 408
122 iso_pu_bacteria 2524023210 2524468023 408
123 iso_pu_bacteria 2857576091 2857579832 408
124 iso_pu_bacteria 2904541872 2904542747 408
125 iso_pu_bacteria 2929160207 2929167996 408
126 3300005329 Ga0070683_100003410 Ga0070683_10000341010 409
127 3300005535 Ga0070684_100001930 Ga0070684_1000019305 409
128 3300009093 Ga0105240_10135100 Ga0105240_101351002 409
129 3300025944 Ga0207661_10000349 Ga0207661_1000034923 409
130 3300049581 Ga0501047_0036880 Ga0501047_0036880_2200_3510 409
131 3300049586 Ga0501070_0024898 Ga0501070_0024898_3118_4428 409
132 3300049589 Ga0501073_0109301 Ga0501073_0109301_364_1674 409
133 3300049590 Ga0501074_0033807 Ga0501074_0033807_70_1380 409
134 3300049742 Ga0501080_0045241 Ga0501080_0045241_395_1705 409
135 3300049823 Ga0501044_0095574 Ga0501044_0095574_918_2228 409
136 iso_pu_bacteria 2885270888 2885280207 409
137 3300044735 Ga0466968_0049183 Ga0466968_0049183_344_1663 410
138 3300048925 Ga0496122_0000186 Ga0496122_0000186_96944_98356 410
139 3300048926 Ga0496123_0000162 Ga0496123_0000162_54137_55549 410
140 3300048927 Ga0496124_0095469 Ga0496124_0095469_719_2131 410
141 3300048928 Ga0496125_0057335 Ga0496125_0057335_1399_2775 410
142 3300049822 Ga0501035_0128220 Ga0501035_0128220_595_1905 410
143 3300049571 Ga0501034_0029171 Ga0501034_0029171_2555_3886 411
144 3300049573 Ga0501037_0041567 Ga0501037_0041567_1685_3016 411
145 iso_pu_bacteria 2562617112 2563056815 411
146 iso_pu_bacteria 2711768613 2713481174 411
147 iso_pu_bacteria 2900634093 2900639782 411
148 3300005614 Ga0068856_100340182 Ga0068856_1003401822 412
149 3300005983 Ga0081540_1044232 Ga0081540_10442322 412
150 3300039447 Ga0436361_0382187 Ga0436361_0382187_320_1717 412
151 3300047472 Ga0495686_0097359 Ga0495686_0097359_250_1596 412
152 3300048929 Ga0496126_0017087 Ga0496126_0017087_3513_4838 412
153 3300049568 Ga0501031_0008800 Ga0501031_0008800_1365_2669 412
154 3300049569 Ga0501032_0000048 Ga0501032_0000048_103667_104971 412
155 3300049570 Ga0501033_0000499 Ga0501033_0000499_32743_34047 412
156 3300049571 Ga0501034_0034084 Ga0501034_0034084_2484_3788 412
157 3300049572 Ga0501036_0000020 Ga0501036_0000020_46630_47934 412
158 3300049573 Ga0501037_0000063 Ga0501037_0000063_970_2274 412
159 3300049574 Ga0501038_0000445 Ga0501038_0000445_33376_34680 412
160 3300049575 Ga0501039_0002359 Ga0501039_0002359_11445_12749 412
161 3300049579 Ga0501043_0000241 Ga0501043_0000241_1323_2627 412
162 3300049580 Ga0501046_0007333 Ga0501046_0007333_7051_8355 412
163 3300049581 Ga0501047_0000503 Ga0501047_0000503_40414_41718 412
164 3300049582 Ga0501048_0039517 Ga0501048_0039517_1377_2681 412
165 3300049583 Ga0501067_0000182 Ga0501067_0000182_10852_12156 412
166 3300049584 Ga0501068_0003607 Ga0501068_0003607_1375_2679 412
167 3300049585 Ga0501069_0002322 Ga0501069_0002322_3113_4417 412
168 3300049586 Ga0501070_0022374 Ga0501070_0022374_1363_2667 412
169 3300049588 Ga0501072_0019203 Ga0501072_0019203_1381_2685 412
170 3300049590 Ga0501074_0029624 Ga0501074_0029624_1354_2658 412
171 3300049592 Ga0501076_0152783 Ga0501076_0152783_348_1652 412
172 3300049742 Ga0501080_0210568 Ga0501080_0210568_232_1536 412
173 3300049744 Ga0501083_0003099 Ga0501083_0003099_3796_5100 412
174 3300049822 Ga0501035_0000202 Ga0501035_0000202_34747_36051 412
175 3300049823 Ga0501044_0000648 Ga0501044_0000648_1406_2710 412
176 3300054114 Ga0501084_0083842 Ga0501084_0083842_791_2095 412
177 3300060353 Ga0501082_0014063 Ga0501082_0014063_1379_2683 412
178 iso_pu_bacteria 2728368998 2728753677 412
179 iso_pu_bacteria 2858950400 2858952750 412
180 iso_pu_bacteria 8057798959 8057799065 413
181 iso_pu_bacteria 2738541281 2738744443 414
182 iso_pu_bacteria 2738543032 2739353673 414
183 iso_pu_bacteria 2511231006 2511263699 415
184 iso_pu_bacteria 2599185185 2599483866 415
185 iso_pu_bacteria 2599185257 2599801512 415
186 iso_pu_bacteria 2599185292 2599902542 415
187 iso_pu_bacteria 2671180172 2671768461 415
188 3300005289 Ga0065704_10088514 Ga0065704_100885142 419
189 3300042993 Ga0439440_0000696 Ga0439440_0000696_3977_5320 419
190 iso_pu_bacteria 2808606384 2808967511 419
191 iso_pu_bacteria 2808606390 2809002342 419
192 iso_pu_bacteria 2808606391 2809009619 419
193 iso_pu_bacteria 8039098773 8039103980 421
194 3300013306 Ga0163162_10006575 Ga0163162_100065753 422
195 3300046516 Ga0495628_0028185 Ga0495628_0028185_2073_3386 422
196 3300046690 Ga0495624_0078272 Ga0495624_0078272_144_1457 422
197 3300046809 Ga0495600_0038726 Ga0495600_0038726_499_1812 422
198 3300047319 Ga0495674_0011810 Ga0495674_0011810_6226_7539 422
199 3300047472 Ga0495686_0000044 Ga0495686_0000044_29774_31087 422
200 iso_pu_bacteria 2519103095 2519461424 423
201 iso_pu_bacteria 2582581311 2585290797 423
202 iso_pu_bacteria 2599185239 2599734695 423
203 iso_pu_bacteria 2599185240 2599745418 423
204 iso_pu_bacteria 2599185355 2600207325 423
205 iso_pu_bacteria 2675903129 2676741138 423
206 iso_pu_bacteria 2816332253 2817258329 423
207 iso_pu_bacteria 2816332256 2817281257 423
208 iso_pu_bacteria 2816332286 2817452055 423
209 iso_pu_bacteria 2818991452 2819634501 423
210 iso_pu_bacteria 2870068957 2870075289 423
211 iso_pu_bacteria 2928170801 2928175356 423
212 iso_pu_bacteria 8018845410 8018848497 423
213 iso_pu_bacteria 8020807995 8020810380 423
214 iso_pu_bacteria 8020938398 8020941828 423
215 iso_pu_bacteria 8020945358 8020945613 423
216 iso_pu_bacteria 8020953355 8020958699 423
217 iso_pu_bacteria 8021120328 8021121726 423
218 iso_pu_bacteria 8040167225 8040167424 423
219 iso_pu_bacteria 8040173305 8040175434 423
220 3300005327 Ga0070658_10057086 Ga0070658_100570862 424
221 3300014497 Ga0182008_10003293 Ga0182008_100032937 424
222 3300025909 Ga0207705_10135927 Ga0207705_101359272 424
223 3300005339 Ga0070660_100000013 Ga0070660_10000001394 425
224 3300005366 Ga0070659_100000028 Ga0070659_1000000286 425
225 3300025919 Ga0207657_10000017 Ga0207657_1000001764 425
226 3300025932 Ga0207690_10000009 Ga0207690_10000009157 425
227 iso_pu_bacteria 2863421361 2863422165 425
228 iso_pu_bacteria 2904564687 2904564688 425
229 iso_pu_bacteria 2904571731 2904572615 425
230 iso_pu_bacteria 2928157003 2928159060 425
231 iso_pu_bacteria 2928163908 2928167899 425
232 iso_pu_bacteria 2928536128 2928537930 425
233 iso_pu_bacteria 2981990288 2981992442 425
234 iso_pu_bacteria 641736154 642416711 425
235 3300003758 Ga0055532_1001835 Ga0055532_10018352 427
236 3300003758 Ga0055532_1001843 Ga0055532_10018435 427
237 3300003760 Ga0055527_1000195 Ga0055527_10001953 427
238 3300003761 Ga0055535_1000409 Ga0055535_10004093 427
239 3300003762 Ga0055542_1001289 Ga0055542_10012893 427
240 3300003763 Ga0055529_1004625 Ga0055529_10046252 427
241 3300009093 Ga0105240_10000885 Ga0105240_1000088510 427
242 3300025228 Ga0209672_100079 Ga0209672_100079103 427
243 3300025229 Ga0209147_100061 Ga0209147_100061102 427
244 3300025229 Ga0209147_100107 Ga0209147_100107103 427
245 3300025242 Ga0209258_100273 Ga0209258_10027340 427
246 3300025254 Ga0209148_1002005 Ga0209148_10020054 427
247 3300025272 Ga0209455_1000300 Ga0209455_10003004 427
248 3300025913 Ga0207695_10013953 Ga0207695_100139536 427
249 3300003758 Ga0055532_1001253 Ga0055532_10012533 429
250 3300003760 Ga0055527_1000167 Ga0055527_10001677 429
251 3300003761 Ga0055535_1000382 Ga0055535_10003824 429
252 3300003762 Ga0055542_1000408 Ga0055542_10004084 429
253 3300003763 Ga0055529_1000436 Ga0055529_10004364 429
254 3300003790 Ga0055528_1001311 Ga0055528_10013116 429
255 3300005563 Ga0068855_100079518 Ga0068855_1000795183 429
256 3300005577 Ga0068857_100247489 Ga0068857_1002474891 429
257 3300009093 Ga0105240_10012920 Ga0105240_1001292011 429
258 3300009551 Ga0105238_10013704 Ga0105238_100137045 429
259 3300025228 Ga0209672_100067 Ga0209672_10006743 429
260 3300025229 Ga0209147_100012 Ga0209147_100012484 429
261 3300025242 Ga0209258_100107 Ga0209258_10010745 429
262 3300025254 Ga0209148_1000022 Ga0209148_1000022143 429
263 3300025272 Ga0209455_1000024 Ga0209455_1000024480 429
264 3300025273 Ga0209673_1000021 Ga0209673_100002198 429
265 3300025295 Ga0209564_1007871 Ga0209564_10078713 429
266 3300025924 Ga0207694_10052320 Ga0207694_100523203 429
267 3300025949 Ga0207667_10022620 Ga0207667_100226205 429
268 3300026067 Ga0207678_10015710 Ga0207678_100157105 429
269 3300026116 Ga0207674_10135146 Ga0207674_101351461 429
270 3300027312 Ga0209371_1000961 Ga0209371_10009618 429
271 3300030500 Ga0268256_1000809 Ga0268256_100080914 429
272 3300003320 rootH2_10074072 rootH2_100740722 446

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

26

248

0.87

PF07690

MFS_1

Major Facilitator Superfamily

31

391

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6h7d-assembly1.cif.gz_A crystal structure of a. thaliana sugar transport protein 10 in complex with glucose in the outward occluded state 0.7935 13 421
4gby-assembly1.cif.gz_A the structure of the mfs (major facilitator superfamily) proton:xylose symporter xyle bound to d-xylose 0.7887 16 421
6n3i-assembly1.cif.gz_A crystal structure of a double trp xyle mutants (g58w/l315w) 0.7874 11 421
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.7841 16 423
6g9x-assembly2.cif.gz_B crystal structure of a mfs transporter at 2.54 angstroem resolution 0.7787 10 419
ID Description Score Start End Superfamily
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9592 13 211 1.20.1250.20
af_P37643_22_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9464 13 211 1.20.1250.20
af_P0C0L7_256_445_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.942 237 420 1.20.1250.20
af_Q2G0K4_242_431_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9362 237 418 1.20.1250.20
af_P77228_2_198_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9285 26 211 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7I7QK49-F1-model_v4 MFS transporter 0.9489 23 418 GO:0005886
GO:0015293
AF-A0A2S8MBV9-F1-model_v4 deleted 0.9448 13 203
AF-A0A7V9PLT9-F1-model_v4 deleted 0.9412 13 177
AF-E3HGH5-F1-model_v4 Sugar transporter family protein 1 0.9384 4 418 GO:0005886
GO:0015293
AF-A0A5N0VL63-F1-model_v4 MHS family MFS transporter 0.9359 11 418 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
80.78 0.81 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map