F378122

General Info

Members Datasets Scaffolds Average Seq Length
272 141 544 147

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_101029272|Ga0070683_1010292722
Length 148
Sequence MPLAPTLTIDSTAVANRLRPALLRLSRELRREIHSLGVTGGQVSLLNQIQRDPGVGVRELATRERMSPAGMSKYVARLEQAGLVHRTELADRRRVGLELTGEGARVVGSVKRRRTAWLAARLRGLPRDELEAIDAAVAPLLKLLEVEA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
70 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
71 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
74 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
75 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
76 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
80 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
81 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
82 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
93 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
101 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
106 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
139 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.79
Metatranscriptomes 2.21
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 2.57
Rhizosphere 96.69
Stem 0
Stem Tuber 0
Unclassified 13.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_101029272 3300005329 Bacteria 791
2 rootL2_10212410 3300003322 Bacteria 1163
3 Ga0070658_10038818 3300005327 Bacteria 3840
4 Ga0070658_10072983 3300005327 Bacteria 2813
5 Ga0070683_100263792 3300005329 Bacteria 1639
6 Ga0070683_100592265 3300005329 Bacteria 1061
7 Ga0070680_100248375 3300005336 Unclassified 1504
8 Ga0070680_100752805 3300005336 Bacteria 839
9 Ga0070660_100028117 3300005339 Bacteria 4204
10 Ga0070660_100174009 3300005339 Bacteria 1740
11 Ga0070660_100573450 3300005339 Unclassified 942
12 Ga0070661_100051180 3300005344 Bacteria 3022
13 Ga0070659_100539300 3300005366 Bacteria 998
14 Ga0070714_100017347 3300005435 Bacteria 5831
15 Ga0070714_100071042 3300005435 Bacteria 3010
16 Ga0070714_100780632 3300005435 Bacteria 924
17 Ga0070714_100869472 3300005435 Bacteria 875
18 Ga0070714_102492394 3300005435 Bacteria 502
19 Ga0070713_100711899 3300005436 Bacteria 959
20 Ga0070713_100746615 3300005436 Bacteria 936
21 Ga0070708_100607351 3300005445 Bacteria 1031
22 Ga0070681_10031379 3300005458 Bacteria 5335
23 Ga0070681_10035683 3300005458 Bacteria 4994
24 Ga0070681_10043130 3300005458 Bacteria 4519
25 Ga0070681_10179266 3300005458 Bacteria 2040
26 Ga0070681_10237943 3300005458 Bacteria 1734
27 Ga0070681_10363716 3300005458 Bacteria 1357
28 Ga0070681_11336769 3300005458 Unclassified 640
29 Ga0070685_10602675 3300005466 Bacteria 791
30 Ga0070706_100236472 3300005467 Bacteria 1706
31 Ga0070706_100353238 3300005467 Bacteria 1370
32 Ga0070707_100079795 3300005468 Bacteria 3159
33 Ga0070707_100688290 3300005468 Bacteria 985
34 Ga0070707_101369384 3300005468 Bacteria 674
35 Ga0070698_100149790 3300005471 Bacteria 2281
36 Ga0070698_100309796 3300005471 Bacteria 1510
37 Ga0070698_100352618 3300005471 Bacteria 1403
38 Ga0070699_100223314 3300005518 Bacteria 1679
39 Ga0070679_100018397 3300005530 Bacteria 6781
40 Ga0070679_100108822 3300005530 Bacteria 2758
41 Ga0070679_100110892 3300005530 Bacteria 2730
42 Ga0070679_100130759 3300005530 Bacteria 2492
43 Ga0070679_100539607 3300005530 Bacteria 1110
44 Ga0070684_100052892 3300005535 Bacteria 3533
45 Ga0070684_100612617 3300005535 Bacteria 1012
46 Ga0070697_101445041 3300005536 Bacteria 614
47 Ga0070696_100315151 3300005546 Bacteria 1202
48 Ga0068855_100049894 3300005563 Bacteria 4934
49 Ga0068855_100170925 3300005563 Bacteria 2462
50 Ga0068855_101585620 3300005563 Bacteria 670
51 Ga0070664_100156290 3300005564 Bacteria 2015
52 Ga0068856_100224012 3300005614 Bacteria 1896
53 Ga0068864_101030771 3300005618 Bacteria 817
54 Ga0070717_10032883 3300006028 Bacteria 4181
55 Ga0075432_10015656 3300006058 Bacteria 2587
56 Ga0070715_10938842 3300006163 Bacteria 535
57 Ga0070716_100397495 3300006173 Unclassified 990
58 Ga0070712_100129339 3300006175 Bacteria 1912
59 Ga0075436_100015729 3300006914 Bacteria 5180
60 Ga0105240_10008771 3300009093 Bacteria 14406
61 Ga0105240_10083521 3300009093 Bacteria 3919
62 Ga0111539_10677206 3300009094 Bacteria 1201
63 Ga0105245_10346959 3300009098 Bacteria 1470
64 Ga0114129_10287745 3300009147 Bacteria 2194
65 Ga0105241_10200592 3300009174 Bacteria 1666
66 Ga0105238_11050910 3300009551 Bacteria 836
67 Ga0157373_10052402 3300013100 Bacteria 2904
68 Ga0157369_10009546 3300013105 Bacteria 11098
69 Ga0157369_10170832 3300013105 Bacteria 2291
70 Ga0157369_10605730 3300013105 Bacteria 1131
71 Ga0157369_11050957 3300013105 Bacteria 833
72 Ga0157372_10495274 3300013307 Unclassified 1425
73 Ga0157372_11215309 3300013307 Bacteria 871
74 Ga0182008_10022640 3300014497 Bacteria 3218
75 Ga0157377_10487321 3300014745 Bacteria 859
76 Ga0182006_1059095 3300015261 Bacteria 1452
77 Ga0182007_10008217 3300015262 Bacteria 4301
78 Ga0206356_11594867 3300020070 Bacteria 1270
79 Ga0206354_10375560 3300020081 Bacteria 948
80 Ga0206353_10253634 3300020082 Bacteria 8654
81 Ga0206353_11173310 3300020082 Bacteria 6617
82 Ga0207692_10295185 3300025898 Bacteria 985
83 Ga0207699_10359796 3300025906 Unclassified 1029
84 Ga0207705_10100314 3300025909 Bacteria 2129
85 Ga0207705_10228279 3300025909 Unclassified 1415
86 Ga0207684_10040117 3300025910 Bacteria 3969
87 Ga0207707_10025708 3300025912 Bacteria 5150
88 Ga0207707_10051391 3300025912 Bacteria 3589
89 Ga0207707_10308550 3300025912 Bacteria 1367
90 Ga0207695_10126451 3300025913 Bacteria 2517
91 Ga0207693_10872774 3300025915 Bacteria 691
92 Ga0207660_10208914 3300025917 Archaea 1528
93 Ga0207660_10215002 3300025917 Unclassified 1507
94 Ga0207657_10002962 3300025919 Bacteria 18203
95 Ga0207657_10033188 3300025919 Bacteria 4655
96 Ga0207657_10189003 3300025919 Bacteria 1663
97 Ga0207657_10272570 3300025919 Bacteria 1345
98 Ga0207649_10054936 3300025920 Bacteria 2481
99 Ga0207649_10585397 3300025920 Unclassified 857
100 Ga0207652_10079536 3300025921 Bacteria 2864
101 Ga0207652_10115579 3300025921 Bacteria 2383
102 Ga0207652_10431275 3300025921 Bacteria 1188
103 Ga0207652_10811042 3300025921 Bacteria 831
104 Ga0207652_11437619 3300025921 Unclassified 593
105 Ga0207646_10098139 3300025922 Bacteria 2625
106 Ga0207646_10120258 3300025922 Bacteria 2360
107 Ga0207646_10138961 3300025922 Bacteria 2187
108 Ga0207646_10728500 3300025922 Bacteria 886
109 Ga0207646_11750789 3300025922 Bacteria 533
110 Ga0207687_10423323 3300025927 Unclassified 1099
111 Ga0207700_10658836 3300025928 Bacteria 933
112 Ga0207664_10001903 3300025929 Bacteria 13709
113 Ga0207664_10047446 3300025929 Bacteria 3374
114 Ga0207664_10458877 3300025929 Bacteria 1138
115 Ga0207665_10370083 3300025939 Unclassified 1085
116 Ga0207661_10000786 3300025944 Bacteria 20674
117 Ga0207661_10027175 3300025944 Bacteria 4369
118 Ga0207661_10717292 3300025944 Bacteria 920
119 Ga0207667_10235027 3300025949 Bacteria 1876
120 Ga0207658_11957391 3300025986 Bacteria 534
121 Ga0207702_10206643 3300026078 Bacteria 1823
122 Ga0207674_10322652 3300026116 Unclassified 1494
123 Ga0207428_10170279 3300027907 Bacteria 1650
124 Ga0265337_1021754 3300028556 Bacteria 1995
125 Ga0265326_10021667 3300028558 Bacteria 1840
126 Ga0265326_10050953 3300028558 Bacteria 1173
127 Ga0265319_1001759 3300028563 Bacteria 12441
128 Ga0265319_1002977 3300028563 Bacteria 9009
129 Ga0265334_10000391 3300028573 Bacteria 23210
130 Ga0265334_10014702 3300028573 Bacteria 3259
131 Ga0265318_10000315 3300028577 Bacteria 38724
132 Ga0265318_10004916 3300028577 Bacteria 6373
133 Ga0265318_10244225 3300028577 Unclassified 655
134 Ga0265323_10041303 3300028653 Bacteria 1674
135 Ga0265322_10005803 3300028654 Bacteria 3643
136 Ga0265322_10014832 3300028654 Bacteria 2252
137 Ga0265336_10002898 3300028666 Bacteria 6897
138 Ga0265336_10026831 3300028666 Unclassified 1808
139 Ga0265336_10039406 3300028666 Bacteria 1449
140 Ga0265338_10012736 3300028800 Bacteria 9567
141 Ga0265338_10017460 3300028800 Bacteria 7731
142 Ga0265338_10071846 3300028800 Bacteria 2957
143 Ga0265338_10086167 3300028800 Bacteria 2615
144 Ga0265324_10166920 3300029957 Bacteria 748
145 Ga0265330_10000911 3300031235 Bacteria 18257
146 Ga0265330_10006899 3300031235 Bacteria 5581
147 Ga0265332_10001671 3300031238 Bacteria 12113
148 Ga0265332_10054021 3300031238 Unclassified 1724
149 Ga0265332_10088228 3300031238 Bacteria 1313
150 Ga0265328_10001112 3300031239 Bacteria 12379
151 Ga0265328_10069811 3300031239 Bacteria 1291
152 Ga0265320_10001911 3300031240 Bacteria 14719
153 Ga0265320_10010712 3300031240 Bacteria 5437
154 Ga0265320_10057116 3300031240 Bacteria 1873
155 Ga0265325_10000170 3300031241 Bacteria 46230
156 Ga0265325_10177223 3300031241 Bacteria 994
157 Ga0265329_10006991 3300031242 Bacteria 4410
158 Ga0265329_10030793 3300031242 Unclassified 1746
159 Ga0265329_10165232 3300031242 Unclassified 720
160 Ga0265340_10002460 3300031247 Bacteria 10533
161 Ga0265340_10015453 3300031247 Bacteria 3965
162 Ga0265339_10003552 3300031249 Bacteria 10900
163 Ga0265339_10015201 3300031249 Bacteria 4621
164 Ga0265339_10116222 3300031249 Unclassified 1379
165 Ga0265331_10000845 3300031250 Bacteria 24903
166 Ga0265331_10218845 3300031250 Bacteria 856
167 Ga0265327_10003863 3300031251 Bacteria 13808
168 Ga0265327_10020160 3300031251 Bacteria 4072
169 Ga0265327_10284858 3300031251 Unclassified 730
170 Ga0265316_10001201 3300031344 Bacteria 28013
171 Ga0265316_10055979 3300031344 Bacteria 3082
172 Ga0265316_10283769 3300031344 Bacteria 1209
173 Ga0265313_10001525 3300031595 Bacteria 21531
174 Ga0265313_10050381 3300031595 Bacteria 1998
175 Ga0265313_10148044 3300031595 Bacteria 1005
176 Ga0265314_10002191 3300031711 Bacteria 20408
177 Ga0265314_10011167 3300031711 Bacteria 7441
178 Ga0265314_10011918 3300031711 Bacteria 7137
179 Ga0265342_10021343 3300031712 Bacteria 4138
180 Ga0265342_10028692 3300031712 Bacteria 3462
181 Ga0265342_10087319 3300031712 Unclassified 1792
182 Ga0373944_0234284 3300035089 Bacteria 674
183 Ga0373925_1219147 3300037068 Unclassified 618
184 Ga0395899_0033405 3300037312 Bacteria 3863
185 Ga0395899_0056019 3300037312 Bacteria 2915
186 Ga0395900_0110177 3300037418 Bacteria 2828
187 Ga0395900_0332739 3300037418 Bacteria 1496
188 Ga0395900_0428531 3300037418 Bacteria 1282
189 Ga0395900_0750144 3300037418 Bacteria 906
190 Ga0395900_0817286 3300037418 Unclassified 859
191 Ga0395898_0018847 3300037466 Bacteria 7032
192 Ga0395898_0020322 3300037466 Bacteria 6744
193 Ga0395898_0198182 3300037466 Bacteria 1918
194 Ga0395898_0361453 3300037466 Bacteria 1384
195 Ga0395898_0425933 3300037466 Bacteria 1264
196 Ga0395905_0016081 3300037471 Bacteria 7112
197 Ga0395905_0079985 3300037471 Bacteria 3063
198 Ga0395905_1377306 3300037471 Bacteria 609
199 Ga0395901_0000856 3300038443 Bacteria 33489
200 Ga0395901_0166402 3300038443 Bacteria 2315
201 Ga0395901_0204073 3300038443 Bacteria 2071
202 Ga0395901_0467480 3300038443 Bacteria 1288
203 Ga0466969_0134041 3300044656 Bacteria 1148
204 Ga0453683_0578367 3300044673 Bacteria 732
205 Ga0466966_0002833 3300044684 Bacteria 11413
206 Ga0466966_0153233 3300044684 Bacteria 1405
207 Ga0466961_0289647 3300044693 Bacteria 1001
208 Ga0466963_0004138 3300044694 Bacteria 8392
209 Ga0466963_0004286 3300044694 Bacteria 8278
210 Ga0466963_0135322 3300044694 Bacteria 1705
211 Ga0466963_0235880 3300044694 Bacteria 1282
212 Ga0466963_0481396 3300044694 Unclassified 876
213 Ga0466964_0021248 3300044706 Unclassified 2509
214 Ga0466964_0100028 3300044706 Bacteria 1277
215 Ga0466964_0126081 3300044706 Unclassified 1160
216 Ga0466964_0706397 3300044706 Bacteria 562
217 Ga0466971_0369521 3300044719 Bacteria 696
218 Ga0466957_0071401 3300044842 Bacteria 2147
219 Ga0466959_0160538 3300045049 Bacteria 1581
220 Ga0466959_0197328 3300045049 Bacteria 1402
221 Ga0466959_0425422 3300045049 Bacteria 901
222 Ga0466958_0000888 3300045836 Bacteria 13389
223 Ga0466958_0013371 3300045836 Bacteria 4672
224 Ga0466958_0050411 3300045836 Bacteria 2520
225 Ga0466958_0138182 3300045836 Bacteria 1533
226 Ga0466958_0206468 3300045836 Bacteria 1251
227 Ga0466958_0921489 3300045836 Bacteria 570
228 Ga0466967_0009676 3300045976 Bacteria 7171
229 Ga0466967_0010658 3300045976 Bacteria 6910
230 Ga0466967_0013599 3300045976 Bacteria 6297
231 Ga0466967_0020765 3300045976 Bacteria 5318
232 Ga0466967_0063716 3300045976 Bacteria 3276
233 Ga0466967_0068006 3300045976 Bacteria 3179
234 Ga0466967_0374479 3300045976 Bacteria 1381
235 Ga0466967_0393114 3300045976 Bacteria 1348
236 Ga0466967_0608285 3300045976 Bacteria 1079
237 Ga0466967_1741863 3300045976 Bacteria 620
238 Ga0466967_2276611 3300045976 Bacteria 537
239 Ga0495641_0109166 3300046461 Unclassified 1235
240 Ga0495652_0353692 3300046529 Bacteria 1052
241 Ga0495667_0063597 3300046559 Unclassified 2415
242 Ga0495634_0260637 3300046642 Bacteria 1058
243 Ga0495635_0183010 3300046663 Unclassified 1424
244 Ga0495657_0325184 3300046675 Unclassified 913
245 Ga0495613_0464020 3300046689 Unclassified 857
246 Ga0495670_0114130 3300046691 Bacteria 1400
247 Ga0495674_0322990 3300047319 Unclassified 1257
248 Ga0495680_0055578 3300047322 Bacteria 3070
249 Ga0495680_0167176 3300047322 Unclassified 1594
250 Ga0495684_0478697 3300047471 Unclassified 860
251 Ga0496103_0188302 3300048906 Bacteria 1327
252 Ga0496108_0181580 3300048911 Bacteria 1822
253 Ga0496109_0609239 3300048912 Unclassified 1028
254 Ga0496109_0842068 3300048912 Bacteria 855
255 Ga0496110_0271987 3300048913 Bacteria 1542
256 Ga0496112_0732413 3300048915 Bacteria 916
257 Ga0496115_0314060 3300048918 Unclassified 1283
258 Ga0501040_0356709 3300049576 Bacteria 1048
259 Ga0501067_0016409 3300049583 Bacteria 4092
260 Ga0501069_0154759 3300049585 Bacteria 1318
261 Ga0501070_0703736 3300049586 Bacteria 799
262 Ga0501072_0692287 3300049588 Bacteria 801
263 Ga0501081_0738378 3300049743 Bacteria 740
264 nmdc:mga05p37_832332_c1 3300050507 Bacteria 1005
265 nmdc:mga08y16_435558_c1 3300050511 Bacteria 1339
266 nmdc:mga08x19_105595_c1 3300050514 Bacteria 1873
267 Ga0495601_0724359 3300053077 Bacteria 634
268 Ga0500641_0065594 3300053096 Bacteria 1519
269 Ga0587088_086166 3300059508 Bacteria 680
270 Ga0587106_009989 3300059605 Bacteria 1219
271 Ga0530510_0090273 3300061734 Bacteria 2235
272 Ga0530510_1077464 3300061734 Bacteria 615
273 Ga0070683_101029272
274 rootL2_10212410
275 Ga0070658_10038818
276 Ga0070658_10072983
277 Ga0070683_100263792
278 Ga0070683_100592265
279 Ga0070680_100248375
280 Ga0070680_100752805
281 Ga0070660_100028117
282 Ga0070660_100174009
283 Ga0070660_100573450
284 Ga0070661_100051180
285 Ga0070659_100539300
286 Ga0070714_100017347
287 Ga0070714_100071042
288 Ga0070714_100780632
289 Ga0070714_100869472
290 Ga0070714_102492394
291 Ga0070713_100711899
292 Ga0070713_100746615
293 Ga0070708_100607351
294 Ga0070681_10031379
295 Ga0070681_10035683
296 Ga0070681_10043130
297 Ga0070681_10179266
298 Ga0070681_10237943
299 Ga0070681_10363716
300 Ga0070681_11336769
301 Ga0070685_10602675
302 Ga0070706_100236472
303 Ga0070706_100353238
304 Ga0070707_100079795
305 Ga0070707_100688290
306 Ga0070707_101369384
307 Ga0070698_100149790
308 Ga0070698_100309796
309 Ga0070698_100352618
310 Ga0070699_100223314
311 Ga0070679_100018397
312 Ga0070679_100108822
313 Ga0070679_100110892
314 Ga0070679_100130759
315 Ga0070679_100539607
316 Ga0070684_100052892
317 Ga0070684_100612617
318 Ga0070697_101445041
319 Ga0070696_100315151
320 Ga0068855_100049894
321 Ga0068855_100170925
322 Ga0068855_101585620
323 Ga0070664_100156290
324 Ga0068856_100224012
325 Ga0068864_101030771
326 Ga0070717_10032883
327 Ga0075432_10015656
328 Ga0070715_10938842
329 Ga0070716_100397495
330 Ga0070712_100129339
331 Ga0075436_100015729
332 Ga0105240_10008771
333 Ga0105240_10083521
334 Ga0111539_10677206
335 Ga0105245_10346959
336 Ga0114129_10287745
337 Ga0105241_10200592
338 Ga0105238_11050910
339 Ga0157373_10052402
340 Ga0157369_10009546
341 Ga0157369_10170832
342 Ga0157369_10605730
343 Ga0157369_11050957
344 Ga0157372_10495274
345 Ga0157372_11215309
346 Ga0182008_10022640
347 Ga0157377_10487321
348 Ga0182006_1059095
349 Ga0182007_10008217
350 Ga0206356_11594867
351 Ga0206354_10375560
352 Ga0206353_10253634
353 Ga0206353_11173310
354 Ga0207692_10295185
355 Ga0207699_10359796
356 Ga0207705_10100314
357 Ga0207705_10228279
358 Ga0207684_10040117
359 Ga0207707_10025708
360 Ga0207707_10051391
361 Ga0207707_10308550
362 Ga0207695_10126451
363 Ga0207693_10872774
364 Ga0207660_10208914
365 Ga0207660_10215002
366 Ga0207657_10002962
367 Ga0207657_10033188
368 Ga0207657_10189003
369 Ga0207657_10272570
370 Ga0207649_10054936
371 Ga0207649_10585397
372 Ga0207652_10079536
373 Ga0207652_10115579
374 Ga0207652_10431275
375 Ga0207652_10811042
376 Ga0207652_11437619
377 Ga0207646_10098139
378 Ga0207646_10120258
379 Ga0207646_10138961
380 Ga0207646_10728500
381 Ga0207646_11750789
382 Ga0207687_10423323
383 Ga0207700_10658836
384 Ga0207664_10001903
385 Ga0207664_10047446
386 Ga0207664_10458877
387 Ga0207665_10370083
388 Ga0207661_10000786
389 Ga0207661_10027175
390 Ga0207661_10717292
391 Ga0207667_10235027
392 Ga0207658_11957391
393 Ga0207702_10206643
394 Ga0207674_10322652
395 Ga0207428_10170279
396 Ga0265337_1021754
397 Ga0265326_10021667
398 Ga0265326_10050953
399 Ga0265319_1001759
400 Ga0265319_1002977
401 Ga0265334_10000391
402 Ga0265334_10014702
403 Ga0265318_10000315
404 Ga0265318_10004916
405 Ga0265318_10244225
406 Ga0265323_10041303
407 Ga0265322_10005803
408 Ga0265322_10014832
409 Ga0265336_10002898
410 Ga0265336_10026831
411 Ga0265336_10039406
412 Ga0265338_10012736
413 Ga0265338_10017460
414 Ga0265338_10071846
415 Ga0265338_10086167
416 Ga0265324_10166920
417 Ga0265330_10000911
418 Ga0265330_10006899
419 Ga0265332_10001671
420 Ga0265332_10054021
421 Ga0265332_10088228
422 Ga0265328_10001112
423 Ga0265328_10069811
424 Ga0265320_10001911
425 Ga0265320_10010712
426 Ga0265320_10057116
427 Ga0265325_10000170
428 Ga0265325_10177223
429 Ga0265329_10006991
430 Ga0265329_10030793
431 Ga0265329_10165232
432 Ga0265340_10002460
433 Ga0265340_10015453
434 Ga0265339_10003552
435 Ga0265339_10015201
436 Ga0265339_10116222
437 Ga0265331_10000845
438 Ga0265331_10218845
439 Ga0265327_10003863
440 Ga0265327_10020160
441 Ga0265327_10284858
442 Ga0265316_10001201
443 Ga0265316_10055979
444 Ga0265316_10283769
445 Ga0265313_10001525
446 Ga0265313_10050381
447 Ga0265313_10148044
448 Ga0265314_10002191
449 Ga0265314_10011167
450 Ga0265314_10011918
451 Ga0265342_10021343
452 Ga0265342_10028692
453 Ga0265342_10087319
454 Ga0373944_0234284
455 Ga0373925_1219147
456 Ga0395899_0033405
457 Ga0395899_0056019
458 Ga0395900_0110177
459 Ga0395900_0332739
460 Ga0395900_0428531
461 Ga0395900_0750144
462 Ga0395900_0817286
463 Ga0395898_0018847
464 Ga0395898_0020322
465 Ga0395898_0198182
466 Ga0395898_0361453
467 Ga0395898_0425933
468 Ga0395905_0016081
469 Ga0395905_0079985
470 Ga0395905_1377306
471 Ga0395901_0000856
472 Ga0395901_0166402
473 Ga0395901_0204073
474 Ga0395901_0467480
475 Ga0466969_0134041
476 Ga0453683_0578367
477 Ga0466966_0002833
478 Ga0466966_0153233
479 Ga0466961_0289647
480 Ga0466963_0004138
481 Ga0466963_0004286
482 Ga0466963_0135322
483 Ga0466963_0235880
484 Ga0466963_0481396
485 Ga0466964_0021248
486 Ga0466964_0100028
487 Ga0466964_0126081
488 Ga0466964_0706397
489 Ga0466971_0369521
490 Ga0466957_0071401
491 Ga0466959_0160538
492 Ga0466959_0197328
493 Ga0466959_0425422
494 Ga0466958_0000888
495 Ga0466958_0013371
496 Ga0466958_0050411
497 Ga0466958_0138182
498 Ga0466958_0206468
499 Ga0466958_0921489
500 Ga0466967_0009676
501 Ga0466967_0010658
502 Ga0466967_0013599
503 Ga0466967_0020765
504 Ga0466967_0063716
505 Ga0466967_0068006
506 Ga0466967_0374479
507 Ga0466967_0393114
508 Ga0466967_0608285
509 Ga0466967_1741863
510 Ga0466967_2276611
511 Ga0495641_0109166
512 Ga0495652_0353692
513 Ga0495667_0063597
514 Ga0495634_0260637
515 Ga0495635_0183010
516 Ga0495657_0325184
517 Ga0495613_0464020
518 Ga0495670_0114130
519 Ga0495674_0322990
520 Ga0495680_0055578
521 Ga0495680_0167176
522 Ga0495684_0478697
523 Ga0496103_0188302
524 Ga0496108_0181580
525 Ga0496109_0609239
526 Ga0496109_0842068
527 Ga0496110_0271987
528 Ga0496112_0732413
529 Ga0496115_0314060
530 Ga0501040_0356709
531 Ga0501067_0016409
532 Ga0501069_0154759
533 Ga0501070_0703736
534 Ga0501072_0692287
535 Ga0501081_0738378
536 nmdc:mga05p37_832332_c1
537 nmdc:mga08y16_435558_c1
538 nmdc:mga08x19_105595_c1
539 Ga0495601_0724359
540 Ga0500641_0065594
541 Ga0587088_086166
542 Ga0587106_009989
543 Ga0530510_0090273
544 Ga0530510_1077464

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

42

85

0.96

PF01047

MarR

MarR family

38

95

0.93

PF12802

MarR_2

MarR family

36

94

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wte-assembly1.cif.gz_B the structure of the crispr-associated protein, csa3, from sulfolobus solfataricus at 1.8 angstrom resolution. 0.9214 40 110
6wxq-assembly1.cif.gz_B crystal structure of crispr-associated transcription factor csa3 complexed with ca4 0.9105 40 107
5zuo-assembly1.cif.gz_A crystal structure of bz junction in diverse sequence 0.91 51 98
5j6x-assembly2.cif.gz_B crystal structure of the apo-zalpha of zebrafish pkz 0.9087 52 99
2dbb-assembly1.cif.gz_B crystal structure of ph0061 0.9075 39 79
ID Description Score Start End Superfamily
2cfxG01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9351 39 79 1.10.10.10
2cfxC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9316 39 79 1.10.10.10
2cfxE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.931 39 79 1.10.10.10
2p6sG01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9283 39 79 1.10.10.10
af_Q57693_7_69_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.925 40 106 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2W5ZF29-F1-model_v4 Transcriptional regulator 0.9632 1 144 GO:0003700
AF-A0A7W0NI96-F1-model_v4 MarR family transcriptional regulator 0.9565 1 142 GO:0003677
GO:0003700
GO:0006950
AF-A0A538IA77-F1-model_v4 MarR family transcriptional regulator 0.9509 1 143 GO:0003700
AF-A0A538CW33-F1-model_v4 MarR family transcriptional regulator 0.9507 21 144 GO:0003700
AF-A0A7W0NI96-F1-model_v4 MarR family transcriptional regulator 0.9435 1 142 GO:0003677
GO:0003700
GO:0006950

Map