F377892

General Info

Members Datasets Scaffolds Average Seq Length
271 158 542 155

Family's Representative Sequence

Representative Sequence 3300046675|Ga0495657_0061281|Ga0495657_0061281_79_642
Length 187
Sequence VTRQRARRLPDVTSKQIHKKGVVNMRVGIATDHGGFGLKEELLGQLHAAGHEVVDFGANSLSQADDYPDYVLPLARAVVAGKVERGIAICGSGVGASVCANKVPGVRAALIHDHFSAKQGVEDDHMNILCMGGRTVGPCVAWDLVQAFLQAKYSQEARHLRRLAKVASVESEGRGNSRAAGPAKEVT

Samples

Sample ID Description Type Environment
1 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
69 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
98 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
99 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
105 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
117 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.11
Rhizosphere 98.15
Stem 0
Stem Tuber 0
Unclassified 21.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495657_0061281 3300046675 Bacteria 2489
2 Ga0065704_10317113 3300005289 Bacteria 859
3 Ga0065712_10001174 3300005290 Bacteria 10181
4 Ga0065712_10007712 3300005290 Bacteria 2673
5 Ga0065715_10089980 3300005293 Bacteria 7966
6 Ga0065715_10129031 3300005293 Bacteria 2054
7 Ga0070690_100408026 3300005330 Unclassified 999
8 Ga0070680_100005495 3300005336 Bacteria 9592
9 Ga0068868_100139653 3300005338 Bacteria 1988
10 Ga0070660_100005225 3300005339 Bacteria 8979
11 Ga0070691_10385184 3300005341 Bacteria 786
12 Ga0070674_100698612 3300005356 Unclassified 867
13 Ga0070659_100038212 3300005366 Bacteria 3744
14 Ga0070659_100089052 3300005366 Bacteria 2472
15 Ga0070714_100031773 3300005435 Bacteria 4407
16 Ga0070714_101053962 3300005435 Unclassified 792
17 Ga0070714_101883009 3300005435 Bacteria 584
18 Ga0070713_100116074 3300005436 Bacteria 2341
19 Ga0070713_100518294 3300005436 Unclassified 1126
20 Ga0070713_101118111 3300005436 Bacteria 762
21 Ga0070713_101174961 3300005436 Bacteria 742
22 Ga0070710_10074492 3300005437 Bacteria 1965
23 Ga0070710_10378832 3300005437 Unclassified 943
24 Ga0070711_100041128 3300005439 Bacteria 3120
25 Ga0070711_100049514 3300005439 Bacteria 2877
26 Ga0070711_101338825 3300005439 Unclassified 622
27 Ga0070705_101377653 3300005440 Bacteria 587
28 Ga0070700_101098856 3300005441 Unclassified 659
29 Ga0070694_100015928 3300005444 Bacteria 4729
30 Ga0070708_100008104 3300005445 Bacteria 8425
31 Ga0070708_100095394 3300005445 Bacteria 2715
32 Ga0070678_100145713 3300005456 Bacteria 1901
33 Ga0070662_100008975 3300005457 Bacteria 6522
34 Ga0070681_10307461 3300005458 Bacteria 1495
35 Ga0070706_100000180 3300005467 Bacteria 80488
36 Ga0070706_100010135 3300005467 Bacteria 8760
37 Ga0070706_100019394 3300005467 Bacteria 6272
38 Ga0070707_100018675 3300005468 Bacteria 6525
39 Ga0070707_100043279 3300005468 Bacteria 4310
40 Ga0070707_100175378 3300005468 Bacteria 2089
41 Ga0070698_100090003 3300005471 Bacteria 3052
42 Ga0070698_100101181 3300005471 Bacteria 2853
43 Ga0070699_100004715 3300005518 Bacteria 12058
44 Ga0070699_100005279 3300005518 Bacteria 11336
45 Ga0070699_100762999 3300005518 Bacteria 885
46 Ga0070679_100185320 3300005530 Bacteria 2052
47 Ga0070697_100024858 3300005536 Bacteria 4771
48 Ga0070697_100052731 3300005536 Bacteria 3305
49 Ga0070697_100114590 3300005536 Unclassified 2250
50 Ga0070697_100345270 3300005536 Bacteria 1285
51 Ga0070697_100975434 3300005536 Unclassified 753
52 Ga0068853_100083558 3300005539 Bacteria 2798
53 Ga0070695_100071800 3300005545 Bacteria 2268
54 Ga0070696_100000438 3300005546 Bacteria 26224
55 Ga0070665_100299596 3300005548 Unclassified 1610
56 Ga0070704_100415320 3300005549 Unclassified 1151
57 Ga0070664_100035060 3300005564 Bacteria 4212
58 Ga0068857_100270934 3300005577 Bacteria 1560
59 Ga0068856_100195294 3300005614 Bacteria 2038
60 Ga0068856_100244208 3300005614 Bacteria 1811
61 Ga0068856_101197787 3300005614 Unclassified 776
62 Ga0068864_100502929 3300005618 Bacteria 1166
63 Ga0068870_10672980 3300005840 Bacteria 711
64 Ga0068858_100593485 3300005842 Unclassified 1074
65 Ga0081455_10002762 3300005937 Bacteria 20717
66 Ga0081455_10101571 3300005937 Bacteria 2308
67 Ga0070717_10095148 3300006028 Unclassified 2521
68 Ga0070715_10169248 3300006163 Bacteria 1087
69 Ga0070716_100599629 3300006173 Unclassified 828
70 Ga0070712_100068808 3300006175 Bacteria 2523
71 Ga0070712_100090536 3300006175 Bacteria 2239
72 Ga0070712_100256471 3300006175 Bacteria 1400
73 Ga0070712_101237877 3300006175 Bacteria 650
74 Ga0075428_100240610 3300006844 Bacteria 1953
75 Ga0075428_100462966 3300006844 Bacteria 1358
76 Ga0075428_100902764 3300006844 Bacteria 937
77 Ga0075430_101294110 3300006846 Unclassified 600
78 Ga0075431_100037143 3300006847 Bacteria 5020
79 Ga0075431_100125615 3300006847 Bacteria 2647
80 Ga0075431_100243003 3300006847 Bacteria 1831
81 Ga0075431_100556879 3300006847 Bacteria 1133
82 Ga0075433_10114137 3300006852 Bacteria 2397
83 Ga0075433_10289597 3300006852 Bacteria 1451
84 Ga0075434_100006591 3300006871 Bacteria 10653
85 Ga0075434_100011055 3300006871 Bacteria 8492
86 Ga0075434_100054651 3300006871 Bacteria 3967
87 Ga0075434_100562414 3300006871 Unclassified 1160
88 Ga0075436_100012382 3300006914 Bacteria 5848
89 Ga0075436_100033019 3300006914 Bacteria 3566
90 Ga0075436_100216937 3300006914 Unclassified 1357
91 Ga0097620_100537611 3300006931 Bacteria 1263
92 Ga0075435_100015079 3300007076 Bacteria 5801
93 Ga0075435_100020581 3300007076 Bacteria 5059
94 Ga0075435_100146561 3300007076 Unclassified 1983
95 Ga0075435_101070419 3300007076 Bacteria 705
96 Ga0111539_10197897 3300009094 Unclassified 2344
97 Ga0111539_11295707 3300009094 Bacteria 846
98 Ga0114129_10048928 3300009147 Bacteria 5941
99 Ga0114129_10152275 3300009147 Unclassified 3164
100 Ga0114129_10572140 3300009147 Unclassified 1467
101 Ga0105246_10754971 3300011119 Bacteria 858
102 Ga0157371_10032696 3300013102 Bacteria 3742
103 Ga0157374_10030594 3300013296 Bacteria 4890
104 Ga0157374_10465003 3300013296 Bacteria 1267
105 Ga0157378_10002742 3300013297 Bacteria 15689
106 Ga0163162_11081236 3300013306 Unclassified 908
107 Ga0157372_10116430 3300013307 Bacteria 3064
108 Ga0157375_10201124 3300013308 Bacteria 2148
109 Ga0163163_11558725 3300014325 Unclassified 722
110 Ga0182008_10160378 3300014497 Bacteria 1131
111 Ga0157377_10657529 3300014745 Bacteria 755
112 Ga0157376_10697514 3300014969 Bacteria 1020
113 Ga0157376_11350754 3300014969 Unclassified 743
114 Ga0213873_10010374 3300021358 Unclassified 1964
115 Ga0213872_10094454 3300021361 Bacteria 1336
116 Ga0213872_10100710 3300021361 Bacteria 1288
117 Ga0213874_10173817 3300021377 Bacteria 763
118 Ga0207653_10000120 3300025885 Bacteria 55535
119 Ga0207692_10045772 3300025898 Bacteria 2190
120 Ga0207692_10117350 3300025898 Unclassified 1485
121 Ga0207692_10135434 3300025898 Bacteria 1396
122 Ga0207692_10688491 3300025898 Bacteria 663
123 Ga0207699_10688734 3300025906 Bacteria 748
124 Ga0207705_10175726 3300025909 Bacteria 1614
125 Ga0207684_10000388 3300025910 Bacteria 59094
126 Ga0207684_10008641 3300025910 Bacteria 9048
127 Ga0207684_10021005 3300025910 Bacteria 5575
128 Ga0207684_10022471 3300025910 Bacteria 5383
129 Ga0207707_10041239 3300025912 Bacteria 4031
130 Ga0207693_10022617 3300025915 Bacteria 4995
131 Ga0207693_10034363 3300025915 Bacteria 3999
132 Ga0207693_10130545 3300025915 Unclassified 1975
133 Ga0207693_10228196 3300025915 Bacteria 1462
134 Ga0207693_10274735 3300025915 Bacteria 1320
135 Ga0207663_10122221 3300025916 Unclassified 1785
136 Ga0207663_10186062 3300025916 Bacteria 1487
137 Ga0207660_10100756 3300025917 Bacteria 2157
138 Ga0207652_10166579 3300025921 Bacteria 1976
139 Ga0207646_10082193 3300025922 Bacteria 2881
140 Ga0207646_10572889 3300025922 Unclassified 1014
141 Ga0207700_10021556 3300025928 Bacteria 4402
142 Ga0207700_10636714 3300025928 Unclassified 950
143 Ga0207664_10646935 3300025929 Bacteria 950
144 Ga0207664_10667533 3300025929 Bacteria 934
145 Ga0207690_10117666 3300025932 Bacteria 1924
146 Ga0207690_10223274 3300025932 Bacteria 1442
147 Ga0207706_10088521 3300025933 Bacteria 2722
148 Ga0207665_10010220 3300025939 Bacteria 6164
149 Ga0207665_10444128 3300025939 Bacteria 994
150 Ga0207665_10490052 3300025939 Bacteria 948
151 Ga0207679_10005855 3300025945 Bacteria 7720
152 Ga0207667_10164240 3300025949 Bacteria 2283
153 Ga0207677_10683010 3300026023 Bacteria 909
154 Ga0207639_10130190 3300026041 Bacteria 2082
155 Ga0207676_10456296 3300026095 Bacteria 1206
156 Ga0207676_10511385 3300026095 Bacteria 1142
157 Ga0207676_10602206 3300026095 Bacteria 1056
158 Ga0207674_10028445 3300026116 Bacteria 5899
159 Ga0268266_10079492 3300028379 Bacteria 2855
160 Ga0268266_10967809 3300028379 Unclassified 823
161 Ga0265760_10207549 3300031090 Unclassified 664
162 Ga0307416_100853126 3300032002 Unclassified 1009
163 Ga0307415_101127441 3300032126 Unclassified 736
164 Ga0373938_0174159 3300034957 Unclassified 584
165 Ga0373934_0005893 3300035086 Bacteria 4537
166 Ga0373939_0204819 3300035114 Unclassified 748
167 Ga0373954_0000601 3300035118 Bacteria 13666
168 Ga0373956_0013255 3300035119 Bacteria 3428
169 Ga0373957_0000756 3300035120 Bacteria 8400
170 Ga0373946_0614945 3300035171 Unclassified 564
171 Ga0373955_0004125 3300035172 Bacteria 6411
172 Ga0373955_0683008 3300035172 Bacteria 630
173 Ga0373924_0046750 3300035410 Bacteria 1784
174 Ga0373924_0121915 3300035410 Bacteria 1131
175 Ga0373931_0047498 3300035691 Bacteria 2272
176 Ga0373935_0044516 3300035692 Bacteria 2797
177 Ga0373935_0323523 3300035692 Bacteria 1095
178 Ga0373935_0679188 3300035692 Bacteria 757
179 Ga0373927_0548596 3300035695 Unclassified 764
180 Ga0373933_0003700 3300035724 Bacteria 8459
181 Ga0373933_0027859 3300035724 Bacteria 3257
182 Ga0373947_0152103 3300035725 Bacteria 1491
183 Ga0373947_1035900 3300035725 Unclassified 560
184 Ga0373937_0001402 3300036401 Bacteria 20108
185 Ga0373937_0001703 3300036401 Bacteria 18479
186 Ga0373925_0473351 3300037068 Bacteria 1027
187 Ga0395898_1156650 3300037466 Unclassified 706
188 Ga0395905_0050639 3300037471 Bacteria 3891
189 Ga0395901_0403042 3300038443 Bacteria 1405
190 Ga0395901_0450843 3300038443 Bacteria 1316
191 Ga0436360_0029712 3300039438 Unclassified 1650
192 Ga0436360_0718017 3300039438 Bacteria 717
193 Ga0436360_0753844 3300039438 Bacteria 1771
194 Ga0436361_0094609 3300039447 Unclassified 839
195 Ga0436361_0287730 3300039447 Bacteria 1082
196 Ga0436361_0743634 3300039447 Unclassified 1443
197 Ga0436361_1168341 3300039447 Bacteria 2191
198 Ga0436363_1358990 3300039450 Bacteria 995
199 Ga0436362_0275539 3300039453 Bacteria 1900
200 Ga0451577_0330358 3300042876 Bacteria 1383
201 Ga0453683_0315833 3300044673 Bacteria 1001
202 Ga0453684_0302102 3300044712 Bacteria 1819
203 Ga0453684_1577572 3300044712 Unclassified 675
204 Ga0451576_0058453 3300045051 Bacteria 4029
205 Ga0451576_0833141 3300045051 Bacteria 968
206 Ga0495592_0437173 3300046454 Bacteria 822
207 Ga0495629_0724012 3300046459 Bacteria 660
208 Ga0495653_0083160 3300046463 Bacteria 2361
209 Ga0495594_0262728 3300046499 Bacteria 983
210 Ga0495608_0021316 3300046511 Bacteria 4448
211 Ga0495628_0174596 3300046516 Bacteria 1628
212 Ga0495666_0269838 3300046526 Bacteria 773
213 Ga0495652_0197827 3300046529 Unclassified 1528
214 Ga0495586_0433573 3300046535 Unclassified 757
215 Ga0495587_0030971 3300046536 Bacteria 3242
216 Ga0495587_0143135 3300046536 Unclassified 1364
217 Ga0495645_0020557 3300046543 Bacteria 4766
218 Ga0495667_0002365 3300046559 Bacteria 12606
219 Ga0495667_0006371 3300046559 Bacteria 8002
220 Ga0495667_0103425 3300046559 Unclassified 1842
221 Ga0495657_0082835 3300046675 Bacteria 2072
222 Ga0495623_0010918 3300046679 Bacteria 5880
223 Ga0495623_0023207 3300046679 Bacteria 4004
224 Ga0495600_0109880 3300046809 Unclassified 1795
225 Ga0495604_0012732 3300047317 Bacteria 6694
226 Ga0495604_0048792 3300047317 Unclassified 3292
227 Ga0495674_0333974 3300047319 Bacteria 1233
228 Ga0495674_0507234 3300047319 Bacteria 964
229 Ga0495680_0155999 3300047322 Unclassified 1660
230 Ga0495680_0180134 3300047322 Bacteria 1526
231 Ga0495675_0001423 3300047444 Bacteria 14501
232 Ga0495684_0034676 3300047471 Bacteria 3871
233 Ga0495684_0636370 3300047471 Bacteria 715
234 Ga0495602_0002035 3300048088 Bacteria 20336
235 Ga0495602_0078233 3300048088 Bacteria 2794
236 Ga0496111_0424540 3300048914 Bacteria 982
237 Ga0496113_1379224 3300048916 Unclassified 546
238 Ga0496115_0270546 3300048918 Unclassified 1396
239 Ga0501047_0593153 3300049581 Unclassified 930
240 Ga0501047_1222235 3300049581 Unclassified 565
241 Ga0501075_0093982 3300049591 Bacteria 2276
242 Ga0501080_0980394 3300049742 Bacteria 734
243 nmdc:mga05p37_10490_c1 3300050507 Bacteria 10992
244 nmdc:mga05p37_57298_c1 3300050507 Bacteria 4799
245 nmdc:mga05p37_793352_c1 3300050507 Bacteria 1037
246 nmdc:mga05p37_83706_c2 3300050507 Bacteria 2992
247 nmdc:mga0qj67_815844_c1 3300050509 Unclassified 738
248 nmdc:mga06r32_1791587_c1 3300050510 Unclassified 550
249 nmdc:mga06r32_232388_c1 3300050510 Bacteria 1832
250 nmdc:mga06r32_319146_c1 3300050510 Bacteria 1539
251 nmdc:mga06r32_55667_c1 3300050510 Bacteria 3795
252 nmdc:mga08y16_947506_c1 3300050511 Bacteria 844
253 nmdc:mga0n895_171826_c1 3300050512 Bacteria 2199
254 nmdc:mga0n895_291780_c1 3300050512 Bacteria 1654
255 nmdc:mga0n895_31560_c1 3300050512 Bacteria 5074
256 nmdc:mga0n895_66889_c1 3300050512 Bacteria 1579
257 nmdc:mga0n895_98963_c1 3300050512 Bacteria 2924
258 nmdc:mga0rr50_12747_c1 3300050513 Bacteria 5447
259 nmdc:mga0rr50_31523_c1 3300050513 Bacteria 3766
260 nmdc:mga0rr50_437940_c1 3300050513 Unclassified 1107
261 nmdc:mga08x19_15462_c1 3300050514 Bacteria 4644
262 nmdc:mga08x19_298914_c1 3300050514 Bacteria 1118
263 nmdc:mga08x19_40554_c1 3300050514 Bacteria 2963
264 nmdc:mga0a205_191501_c1 3300050515 Bacteria 1937
265 nmdc:mga0a205_77600_c1 3300050515 Bacteria 3209
266 nmdc:mga0a205_92775_c1 3300050515 Bacteria 2918
267 Ga0495601_0272220 3300053077 Bacteria 1105
268 Ga0495601_0277876 3300053077 Bacteria 1092
269 Ga0495595_0079811 3300053084 Bacteria 1557
270 Ga0495619_0018933 3300053085 Bacteria 4373
271 Ga0495619_0435768 3300053085 Bacteria 904
272 Ga0495657_0061281
273 Ga0065704_10317113
274 Ga0065712_10001174
275 Ga0065712_10007712
276 Ga0065715_10089980
277 Ga0065715_10129031
278 Ga0070690_100408026
279 Ga0070680_100005495
280 Ga0068868_100139653
281 Ga0070660_100005225
282 Ga0070691_10385184
283 Ga0070674_100698612
284 Ga0070659_100038212
285 Ga0070659_100089052
286 Ga0070714_100031773
287 Ga0070714_101053962
288 Ga0070714_101883009
289 Ga0070713_100116074
290 Ga0070713_100518294
291 Ga0070713_101118111
292 Ga0070713_101174961
293 Ga0070710_10074492
294 Ga0070710_10378832
295 Ga0070711_100041128
296 Ga0070711_100049514
297 Ga0070711_101338825
298 Ga0070705_101377653
299 Ga0070700_101098856
300 Ga0070694_100015928
301 Ga0070708_100008104
302 Ga0070708_100095394
303 Ga0070678_100145713
304 Ga0070662_100008975
305 Ga0070681_10307461
306 Ga0070706_100000180
307 Ga0070706_100010135
308 Ga0070706_100019394
309 Ga0070707_100018675
310 Ga0070707_100043279
311 Ga0070707_100175378
312 Ga0070698_100090003
313 Ga0070698_100101181
314 Ga0070699_100004715
315 Ga0070699_100005279
316 Ga0070699_100762999
317 Ga0070679_100185320
318 Ga0070697_100024858
319 Ga0070697_100052731
320 Ga0070697_100114590
321 Ga0070697_100345270
322 Ga0070697_100975434
323 Ga0068853_100083558
324 Ga0070695_100071800
325 Ga0070696_100000438
326 Ga0070665_100299596
327 Ga0070704_100415320
328 Ga0070664_100035060
329 Ga0068857_100270934
330 Ga0068856_100195294
331 Ga0068856_100244208
332 Ga0068856_101197787
333 Ga0068864_100502929
334 Ga0068870_10672980
335 Ga0068858_100593485
336 Ga0081455_10002762
337 Ga0081455_10101571
338 Ga0070717_10095148
339 Ga0070715_10169248
340 Ga0070716_100599629
341 Ga0070712_100068808
342 Ga0070712_100090536
343 Ga0070712_100256471
344 Ga0070712_101237877
345 Ga0075428_100240610
346 Ga0075428_100462966
347 Ga0075428_100902764
348 Ga0075430_101294110
349 Ga0075431_100037143
350 Ga0075431_100125615
351 Ga0075431_100243003
352 Ga0075431_100556879
353 Ga0075433_10114137
354 Ga0075433_10289597
355 Ga0075434_100006591
356 Ga0075434_100011055
357 Ga0075434_100054651
358 Ga0075434_100562414
359 Ga0075436_100012382
360 Ga0075436_100033019
361 Ga0075436_100216937
362 Ga0097620_100537611
363 Ga0075435_100015079
364 Ga0075435_100020581
365 Ga0075435_100146561
366 Ga0075435_101070419
367 Ga0111539_10197897
368 Ga0111539_11295707
369 Ga0114129_10048928
370 Ga0114129_10152275
371 Ga0114129_10572140
372 Ga0105246_10754971
373 Ga0157371_10032696
374 Ga0157374_10030594
375 Ga0157374_10465003
376 Ga0157378_10002742
377 Ga0163162_11081236
378 Ga0157372_10116430
379 Ga0157375_10201124
380 Ga0163163_11558725
381 Ga0182008_10160378
382 Ga0157377_10657529
383 Ga0157376_10697514
384 Ga0157376_11350754
385 Ga0213873_10010374
386 Ga0213872_10094454
387 Ga0213872_10100710
388 Ga0213874_10173817
389 Ga0207653_10000120
390 Ga0207692_10045772
391 Ga0207692_10117350
392 Ga0207692_10135434
393 Ga0207692_10688491
394 Ga0207699_10688734
395 Ga0207705_10175726
396 Ga0207684_10000388
397 Ga0207684_10008641
398 Ga0207684_10021005
399 Ga0207684_10022471
400 Ga0207707_10041239
401 Ga0207693_10022617
402 Ga0207693_10034363
403 Ga0207693_10130545
404 Ga0207693_10228196
405 Ga0207693_10274735
406 Ga0207663_10122221
407 Ga0207663_10186062
408 Ga0207660_10100756
409 Ga0207652_10166579
410 Ga0207646_10082193
411 Ga0207646_10572889
412 Ga0207700_10021556
413 Ga0207700_10636714
414 Ga0207664_10646935
415 Ga0207664_10667533
416 Ga0207690_10117666
417 Ga0207690_10223274
418 Ga0207706_10088521
419 Ga0207665_10010220
420 Ga0207665_10444128
421 Ga0207665_10490052
422 Ga0207679_10005855
423 Ga0207667_10164240
424 Ga0207677_10683010
425 Ga0207639_10130190
426 Ga0207676_10456296
427 Ga0207676_10511385
428 Ga0207676_10602206
429 Ga0207674_10028445
430 Ga0268266_10079492
431 Ga0268266_10967809
432 Ga0265760_10207549
433 Ga0307416_100853126
434 Ga0307415_101127441
435 Ga0373938_0174159
436 Ga0373934_0005893
437 Ga0373939_0204819
438 Ga0373954_0000601
439 Ga0373956_0013255
440 Ga0373957_0000756
441 Ga0373946_0614945
442 Ga0373955_0004125
443 Ga0373955_0683008
444 Ga0373924_0046750
445 Ga0373924_0121915
446 Ga0373931_0047498
447 Ga0373935_0044516
448 Ga0373935_0323523
449 Ga0373935_0679188
450 Ga0373927_0548596
451 Ga0373933_0003700
452 Ga0373933_0027859
453 Ga0373947_0152103
454 Ga0373947_1035900
455 Ga0373937_0001402
456 Ga0373937_0001703
457 Ga0373925_0473351
458 Ga0395898_1156650
459 Ga0395905_0050639
460 Ga0395901_0403042
461 Ga0395901_0450843
462 Ga0436360_0029712
463 Ga0436360_0718017
464 Ga0436360_0753844
465 Ga0436361_0094609
466 Ga0436361_0287730
467 Ga0436361_0743634
468 Ga0436361_1168341
469 Ga0436363_1358990
470 Ga0436362_0275539
471 Ga0451577_0330358
472 Ga0453683_0315833
473 Ga0453684_0302102
474 Ga0453684_1577572
475 Ga0451576_0058453
476 Ga0451576_0833141
477 Ga0495592_0437173
478 Ga0495629_0724012
479 Ga0495653_0083160
480 Ga0495594_0262728
481 Ga0495608_0021316
482 Ga0495628_0174596
483 Ga0495666_0269838
484 Ga0495652_0197827
485 Ga0495586_0433573
486 Ga0495587_0030971
487 Ga0495587_0143135
488 Ga0495645_0020557
489 Ga0495667_0002365
490 Ga0495667_0006371
491 Ga0495667_0103425
492 Ga0495657_0082835
493 Ga0495623_0010918
494 Ga0495623_0023207
495 Ga0495600_0109880
496 Ga0495604_0012732
497 Ga0495604_0048792
498 Ga0495674_0333974
499 Ga0495674_0507234
500 Ga0495680_0155999
501 Ga0495680_0180134
502 Ga0495675_0001423
503 Ga0495684_0034676
504 Ga0495684_0636370
505 Ga0495602_0002035
506 Ga0495602_0078233
507 Ga0496111_0424540
508 Ga0496113_1379224
509 Ga0496115_0270546
510 Ga0501047_0593153
511 Ga0501047_1222235
512 Ga0501075_0093982
513 Ga0501080_0980394
514 nmdc:mga05p37_10490_c1
515 nmdc:mga05p37_57298_c1
516 nmdc:mga05p37_793352_c1
517 nmdc:mga05p37_83706_c2
518 nmdc:mga0qj67_815844_c1
519 nmdc:mga06r32_1791587_c1
520 nmdc:mga06r32_232388_c1
521 nmdc:mga06r32_319146_c1
522 nmdc:mga06r32_55667_c1
523 nmdc:mga08y16_947506_c1
524 nmdc:mga0n895_171826_c1
525 nmdc:mga0n895_291780_c1
526 nmdc:mga0n895_31560_c1
527 nmdc:mga0n895_66889_c1
528 nmdc:mga0n895_98963_c1
529 nmdc:mga0rr50_12747_c1
530 nmdc:mga0rr50_31523_c1
531 nmdc:mga0rr50_437940_c1
532 nmdc:mga08x19_15462_c1
533 nmdc:mga08x19_298914_c1
534 nmdc:mga08x19_40554_c1
535 nmdc:mga0a205_191501_c1
536 nmdc:mga0a205_77600_c1
537 nmdc:mga0a205_92775_c1
538 Ga0495601_0272220
539 Ga0495601_0277876
540 Ga0495595_0079811
541 Ga0495619_0018933
542 Ga0495619_0435768

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02502

LacAB_rpiB

Ribose/Galactose Isomerase

27

166

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nn4-assembly1.cif.gz_A structural genomics, rpib/alsb 0.9736 2 146
3ph4-assembly1.cif.gz_A clostridium thermocellum ribose-5-phosphate isomerase b with d-allose 0.9708 1 149
4lfk-assembly1.cif.gz_B crystal structure of d-galactose-6-phosphate isomerase in a substrate-free form 0.9705 1 142
1o1x-assembly1.cif.gz_A crystal structure of a ribose 5-phosphate isomerase rpib (tm1080) from thermotoga maritima at 1.90 a resolution 0.9662 2 142
2vvr-assembly1.cif.gz_A crystal structure of the h99n mutant of ribose-5-phosphate isomerase b from e. coli soaked with ribose 5-phosphate 0.9657 2 147
ID Description Score Start End Superfamily
4lfkB00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9705 1 142 3.40.1400.10
1nn4D00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9664 2 147 3.40.1400.10
af_P9WKD7_1_162_3.40.1400.10 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9663 1 147 3.40.1400.10
1o1xA00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9626 2 142 3.40.1400.10
3s5pB00 Alpha Beta;3-Layer(aba) Sandwich;Ribose 5-phosphate Isomerase B; Chain: A,;Sugar-phosphate isomerase, RpiB/LacA/LacB 0.9579 1 130 3.40.1400.10
ID Description Score Start End GO Terms
AF-L0DAW5-F1-model_v4 Sugar-phosphate isomerase, RpiB/LacA/LacB family 0.996 1 144 GO:0005975
GO:0016861
AF-A0A7V7VPN7-F1-model_v4 6-phosphogluconolactonase (EC 3.1.1.31) 0.9955 2 145 GO:0005975
GO:0006098
GO:0016861
GO:0017057
AF-A0A5C6D3P3-F1-model_v4 Putative sugar phosphate isomerase YwlF (EC 5.3.1.-) 0.995 2 146 GO:0005975
GO:0016861
AF-A0A6C2DPQ7-F1-model_v4 Fructose-bisphosphate aldolase (EC 4.1.2.13) 0.9948 1 149 GO:0004332
GO:0006096
GO:0016861
AF-Q1Q779-F1-model_v4 Fusion protein similar to hydrolase/phosphatase (N-terminal) and ribose-5-phosphate isomerase (C-terminal) (EC 5.3.1.6) (Ribose 5-phosphate isomerase B) 0.9938 1 147 GO:0004751
GO:0005975
GO:0016787

Map