F377527

General Info

Members Datasets Scaffolds Average Seq Length
271 179 540 171

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100066324|Ga0068855_1000663242
Length 201
Sequence MRLRCAGETPAVDYLSYATNGKVDRMSTPPLPEIPDTPASDEVIEIERALTRITYLSTRARQHDRLMALAGVPLDRAAVALLRQVADSEPLRPGELAARLGVEASHVTRTVQQLQKSGYVTRVPDPDDRRAQRIELTEAGQQAIDRIRDAGSRGMQVALSHWEPEELRQLATLFHRMVDDFLAAAVEVEAQEQTTASAGTA

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
11 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
16 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
22 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
23 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
24 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
25 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
26 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
27 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
28 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
29 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
30 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
31 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
32 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
35 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
36 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
37 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
40 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
41 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
42 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
43 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
44 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
45 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
46 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
51 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
54 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
55 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
56 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
57 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
58 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
59 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
60 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
61 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
62 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
69 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
70 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
71 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
76 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
77 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
82 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
91 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
94 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
95 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
100 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
107 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
108 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
125 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
126 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
127 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
128 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
129 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
130 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
131 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
132 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
133 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
134 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
135 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
136 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
137 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
138 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
139 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
140 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
141 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
142 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
143 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
144 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
145 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
146 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
147 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
148 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
149 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
150 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
151 2643221548 Streptomyces sp. Root55 Isolate Unclassified
152 2643221647 Streptomyces sp. Root369 Isolate Unclassified
153 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
154 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
155 2643221714 Streptomyces sp. Root264 Isolate Unclassified
156 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
157 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
158 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
159 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
160 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
161 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
162 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
163 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
164 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
165 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
166 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
167 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
168 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
169 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
170 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
171 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
172 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
173 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
174 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
175 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
176 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
177 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
178 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
179 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.45
Metatranscriptomes 0.37
Isolates 12.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.44
Nodule 0.74
Rhizoplane 0
Rhizosphere 67.9
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100066324 3300005563 Bacteria 4208
2 Ga0006562J51391_1101203 3300003578 Bacteria 3199
3 Ga0070713_100307091 3300005436 Bacteria 1462
4 Ga0070662_101247416 3300005457 Bacteria 639
5 Ga0070706_100132433 3300005467 Bacteria 2327
6 Ga0070698_100007051 3300005471 Bacteria 12171
7 Ga0068853_100005498 3300005539 Bacteria 9933
8 Ga0070717_10020794 3300006028 Bacteria 5166
9 Ga0075365_10496208 3300006038 Bacteria 863
10 Ga0075368_10013263 3300006042 Bacteria 3024
11 Ga0070715_10191653 3300006163 Bacteria 1032
12 Ga0075367_10000602 3300006178 Bacteria 13819
13 Ga0075370_10459834 3300006353 Bacteria 766
14 Ga0157372_10293899 3300013307 Bacteria 1889
15 Ga0209758_1001121 3300025297 Bacteria 34485
16 Ga0207647_10004105 3300025904 Bacteria 10809
17 Ga0207685_10156464 3300025905 Bacteria 1036
18 Ga0207684_10002297 3300025910 Bacteria 19447
19 Ga0207684_10115437 3300025910 Bacteria 2300
20 Ga0207706_11187729 3300025933 Bacteria 634
21 Ga0207667_10051213 3300025949 Bacteria 4354
22 Ga0209813_10030391 3300027866 Bacteria 1587
23 Ga0307517_10153311 3300028786 Bacteria 1573
24 Ga0307517_10381360 3300028786 Unclassified 753
25 Ga0307515_10000787 3300028794 Bacteria 73140
26 Ga0307515_10046886 3300028794 Bacteria 6591
27 Ga0307515_10060979 3300028794 Bacteria 5364
28 Ga0265338_10006296 3300028800 Bacteria 15173
29 Ga0307511_10007996 3300030521 Bacteria 10607
30 Ga0307511_10041132 3300030521 Bacteria 3909
31 Ga0307512_10001951 3300030522 Bacteria 27541
32 Ga0307512_10003372 3300030522 Bacteria 18700
33 Ga0307512_10004917 3300030522 Bacteria 14269
34 Ga0307513_10002153 3300031456 Bacteria 27557
35 Ga0307513_10002915 3300031456 Bacteria 23387
36 Ga0307509_10004735 3300031507 Bacteria 19407
37 Ga0307509_10023792 3300031507 Bacteria 6867
38 Ga0307508_10010803 3300031616 Bacteria 8350
39 Ga0307508_10016934 3300031616 Bacteria 6631
40 Ga0307508_10040661 3300031616 Bacteria 4174
41 Ga0307508_10459428 3300031616 Bacteria 866
42 Ga0307514_10001855 3300031649 Bacteria 23367
43 Ga0307514_10122620 3300031649 Bacteria 1809
44 Ga0307514_10124573 3300031649 Bacteria 1788
45 Ga0307514_10154335 3300031649 Bacteria 1534
46 Ga0307514_10199042 3300031649 Bacteria 1262
47 Ga0307514_10215861 3300031649 Bacteria 1184
48 Ga0307514_10217336 3300031649 Bacteria 1177
49 Ga0307516_10009196 3300031730 Bacteria 11061
50 Ga0307516_10155534 3300031730 Bacteria 2042
51 Ga0307516_10233261 3300031730 Bacteria 1543
52 Ga0307518_10104724 3300031838 Bacteria 2021
53 Ga0307507_10005137 3300033179 Bacteria 21932
54 Ga0307510_10016318 3300033180 Bacteria 8766
55 Ga0307510_10083274 3300033180 Bacteria 3089
56 Ga0307510_10179033 3300033180 Bacteria 1686
57 Ga0307510_10209556 3300033180 Bacteria 1473
58 Ga0307510_10228726 3300033180 Bacteria 1364
59 Ga0395900_0071452 3300037418 Bacteria 3568
60 Ga0395900_0136801 3300037418 Bacteria 2510
61 Ga0395898_0001645 3300037466 Bacteria 30199
62 Ga0395898_0382744 3300037466 Bacteria 1342
63 Ga0395905_0227367 3300037471 Bacteria 1745
64 Ga0395901_0325709 3300038443 Bacteria 1589
65 Ga0451843_1106074 3300041509 Bacteria 584
66 Ga0451853_0800817 3300041512 Bacteria 792
67 Ga0439433_0000738 3300041999 Bacteria 6413
68 Ga0439449_0155372 3300042007 Bacteria 853
69 Ga0439449_0326474 3300042007 Bacteria 580
70 Ga0439457_004119 3300042014 Bacteria 3843
71 Ga0439462_0001956 3300042015 Bacteria 4712
72 Ga0450903_001556 3300042138 Bacteria 4273
73 Ga0439458_0000484 3300042157 Bacteria 10197
74 Ga0466972_0007106 3300044658 Bacteria 5621
75 Ga0466972_0172007 3300044658 Bacteria 1016
76 Ga0466965_0021882 3300044683 Bacteria 3081
77 Ga0466966_0021968 3300044684 Bacteria 4189
78 Ga0466966_0450998 3300044684 Bacteria 773
79 Ga0466971_0023910 3300044719 Bacteria 2725
80 Ga0466970_0639698 3300044765 Bacteria 618
81 Ga0466960_0011740 3300044901 Bacteria 3677
82 Ga0466960_0072390 3300044901 Bacteria 1718
83 Ga0466958_0849999 3300045836 Bacteria 595
84 Ga0495603_0072813 3300046455 Bacteria 2018
85 Ga0495629_0015294 3300046459 Bacteria 5510
86 Ga0495629_0035046 3300046459 Bacteria 3548
87 Ga0495638_0145373 3300046460 Bacteria 1380
88 Ga0495651_0339474 3300046462 Bacteria 996
89 Ga0495605_0009676 3300046474 Bacteria 5417
90 Ga0495585_0048271 3300046492 Bacteria 2367
91 Ga0495594_0007186 3300046499 Bacteria 5728
92 Ga0495594_0175168 3300046499 Bacteria 1220
93 Ga0495594_0193906 3300046499 Bacteria 1157
94 Ga0495607_0080937 3300046501 Bacteria 1784
95 Ga0495583_0044195 3300046506 Bacteria 2069
96 Ga0495583_0049792 3300046506 Bacteria 1916
97 Ga0495606_0005397 3300046507 Bacteria 12255
98 Ga0495606_0115652 3300046507 Bacteria 1612
99 Ga0495616_0007996 3300046513 Bacteria 6300
100 Ga0495618_0222519 3300046514 Bacteria 1190
101 Ga0495620_0005928 3300046515 Bacteria 6774
102 Ga0495620_0017037 3300046515 Bacteria 3631
103 Ga0495620_0035846 3300046515 Bacteria 2226
104 Ga0495628_0061211 3300046516 Bacteria 2952
105 Ga0495631_0003531 3300046518 Bacteria 8546
106 Ga0495643_0001250 3300046522 Bacteria 24372
107 Ga0495644_0116565 3300046523 Bacteria 1015
108 Ga0495648_0062631 3300046524 Bacteria 2201
109 Ga0495666_0067768 3300046526 Bacteria 1700
110 Ga0495652_0043882 3300046529 Bacteria 3852
111 Ga0495652_0112987 3300046529 Bacteria 2181
112 Ga0495652_0606148 3300046529 Bacteria 746
113 Ga0495640_0083519 3300046533 Bacteria 2119
114 Ga0495640_0575537 3300046533 Bacteria 681
115 Ga0495609_0116796 3300046538 Bacteria 1149
116 Ga0495597_0045781 3300046542 Bacteria 1940
117 Ga0495597_0079865 3300046542 Bacteria 1400
118 Ga0495633_0107074 3300046558 Bacteria 1297
119 Ga0495667_0115526 3300046559 Bacteria 1734
120 Ga0495668_0009583 3300046616 Bacteria 5930
121 Ga0495668_0010932 3300046616 Bacteria 5465
122 Ga0495634_0328516 3300046642 Bacteria 919
123 Ga0495611_0018675 3300046648 Bacteria 2975
124 Ga0495611_0242973 3300046648 Bacteria 835
125 Ga0495625_0050267 3300046660 Bacteria 2992
126 Ga0495625_0063286 3300046660 Bacteria 2612
127 Ga0495625_0089847 3300046660 Bacteria 2126
128 Ga0495661_0247890 3300046665 Bacteria 910
129 Ga0495588_0013334 3300046674 Bacteria 3914
130 Ga0495588_0057244 3300046674 Bacteria 2014
131 Ga0495657_0015113 3300046675 Bacteria 5656
132 Ga0495657_0023182 3300046675 Bacteria 4438
133 Ga0495657_0023860 3300046675 Bacteria 4365
134 Ga0495599_0118935 3300046678 Bacteria 1643
135 Ga0495599_0682079 3300046678 Bacteria 593
136 Ga0495613_0012985 3300046689 Bacteria 6188
137 Ga0495613_0013938 3300046689 Bacteria 5965
138 Ga0495613_0014228 3300046689 Bacteria 5904
139 Ga0495613_0027741 3300046689 Bacteria 4214
140 Ga0495613_0187484 3300046689 Bacteria 1463
141 Ga0495624_0050577 3300046690 Bacteria 2632
142 Ga0495624_0292076 3300046690 Bacteria 984
143 Ga0495670_0007447 3300046691 Bacteria 5375
144 Ga0495671_0002101 3300046692 Bacteria 12734
145 Ga0495671_0253992 3300046692 Bacteria 848
146 Ga0495649_0009085 3300046694 Bacteria 5931
147 Ga0495589_0005529 3300046794 Bacteria 6665
148 Ga0495589_0026004 3300046794 Bacteria 2967
149 Ga0495589_0058701 3300046794 Bacteria 1892
150 Ga0495589_0061095 3300046794 Bacteria 1850
151 Ga0495660_0028758 3300046810 Bacteria 3137
152 Ga0495660_0140747 3300046810 Bacteria 1201
153 Ga0495660_0184119 3300046810 Bacteria 1008
154 Ga0495604_0065386 3300047317 Bacteria 2769
155 Ga0495604_0082429 3300047317 Bacteria 2405
156 Ga0495636_0002154 3300047318 Bacteria 7557
157 Ga0495636_0066853 3300047318 Bacteria 1529
158 Ga0495636_0467436 3300047318 Bacteria 607
159 Ga0495674_0356236 3300047319 Bacteria 1187
160 Ga0495676_0022359 3300047321 Bacteria 5502
161 Ga0495676_0324495 3300047321 Bacteria 1033
162 Ga0495676_0518043 3300047321 Bacteria 781
163 Ga0495680_0025702 3300047322 Bacteria 4870
164 Ga0495680_0043861 3300047322 Bacteria 3538
165 Ga0495683_0042285 3300047323 Bacteria 2297
166 Ga0495683_0053988 3300047323 Bacteria 2003
167 Ga0495687_001441 3300047443 Bacteria 21849
168 Ga0495687_013503 3300047443 Bacteria 4257
169 Ga0495687_017892 3300047443 Bacteria 3518
170 Ga0495687_021880 3300047443 Bacteria 3081
171 Ga0495687_023911 3300047443 Bacteria 2913
172 Ga0495687_040529 3300047443 Bacteria 2051
173 Ga0495687_043269 3300047443 Bacteria 1963
174 Ga0495687_059798 3300047443 Bacteria 1574
175 Ga0495675_0607301 3300047444 Bacteria 620
176 Ga0495685_004299 3300047447 Bacteria 4591
177 Ga0495685_041347 3300047447 Bacteria 1576
178 Ga0495685_062060 3300047447 Bacteria 1258
179 Ga0495681_0012185 3300047470 Bacteria 5066
180 Ga0495681_0067444 3300047470 Bacteria 1630
181 Ga0495686_0084095 3300047472 Bacteria 1940
182 Ga0495593_0019080 3300047673 Bacteria 3849
183 Ga0495614_0011303 3300048089 Bacteria 3929
184 Ga0495614_0040283 3300048089 Bacteria 2005
185 Ga0495614_0269882 3300048089 Bacteria 781
186 Ga0495626_0063537 3300048091 Bacteria 1674
187 Ga0495682_0053725 3300049460 Bacteria 1463
188 Ga0501032_0237972 3300049569 Bacteria 1183
189 Ga0501033_0100679 3300049570 Bacteria 2108
190 Ga0501034_0040549 3300049571 Bacteria 4713
191 Ga0501036_0003690 3300049572 Bacteria 12262
192 Ga0501036_0114601 3300049572 Bacteria 2278
193 Ga0501036_0665403 3300049572 Bacteria 862
194 Ga0501038_0001154 3300049574 Bacteria 23957
195 Ga0501038_0111713 3300049574 Bacteria 2263
196 Ga0501039_0011840 3300049575 Bacteria 6643
197 Ga0501039_0952217 3300049575 Bacteria 668
198 Ga0501043_0000358 3300049579 Bacteria 41459
199 Ga0501043_0705818 3300049579 Bacteria 736
200 Ga0501047_0057821 3300049581 Bacteria 3749
201 Ga0501047_0152172 3300049581 Bacteria 2189
202 Ga0501048_0527870 3300049582 Bacteria 847
203 Ga0501048_0667920 3300049582 Bacteria 746
204 Ga0501069_0102912 3300049585 Bacteria 1622
205 Ga0501070_0255960 3300049586 Bacteria 1431
206 Ga0501070_0837299 3300049586 Bacteria 720
207 Ga0501073_0271081 3300049589 Bacteria 1171
208 Ga0501074_0197588 3300049590 Bacteria 1433
209 Ga0501035_0064577 3300049822 Bacteria 3253
210 Ga0501035_0119270 3300049822 Bacteria 2307
211 Ga0501044_0283384 3300049823 Bacteria 1590
212 nmdc:mga0yw44_109774_c1 3300050492 Bacteria 1766
213 nmdc:mga06z11_1415_c1 3300050494 Bacteria 8917
214 nmdc:mga04h51_18012_c1 3300050495 Bacteria 2074
215 Ga0495612_0302698 3300053078 Bacteria 717
216 Ga0500610_0077849 3300053079 Bacteria 1728
217 Ga0500578_0056160 3300053086 Bacteria 2518
218 Ga0500644_0044354 3300053088 Bacteria 1493
219 Ga0500583_0032686 3300053092 Bacteria 2297
220 Ga0500651_0025160 3300053093 Bacteria 3735
221 Ga0500566_0025452 3300053094 Bacteria 3470
222 Ga0500560_011435 3300053107 Bacteria 2264
223 Ga0500569_067294 3300053109 Bacteria 1119
224 Ga0500594_0003609 3300053118 Bacteria 3411
225 Ga0500614_212915 3300053123 Bacteria 598
226 Ga0500652_004520 3300053131 Bacteria 4311
227 Ga0500652_134525 3300053131 Bacteria 1031
228 Ga0500561_0008852 3300053137 Bacteria 2022
229 Ga0500573_0288508 3300053140 Bacteria 826
230 Ga0500579_092427 3300053143 Bacteria 1625
231 Ga0500588_0078038 3300053146 Bacteria 1102
232 Ga0500600_0076429 3300053149 Bacteria 1822
233 Ga0500600_0086599 3300053149 Bacteria 1680
234 Ga0500616_0024055 3300053153 Bacteria 3389
235 Ga0500633_0022758 3300053160 Bacteria 1924
236 Ga0500634_0177713 3300053161 Bacteria 962
237 Ga0500587_012317 3300053739 Bacteria 1078
238 2585311071 2582581313 Bacteria 10042643
239 2585313766 2582581314 Bacteria 11452267
240 2616692961 2616644814 Bacteria 11555299
241 2616702465 2616644814 Bacteria 11555299
242 2643764314 2643221548 Bacteria 8053412
243 2644266369 2643221647 Bacteria 10741251
244 2644441014 2643221678 Bacteria 9540101
245 2644458627 2643221682 Bacteria 6743283
246 2644630427 2643221714 Bacteria 9015452
247 2785339586 2784746763 Bacteria 9783172
248 2785366117 2784746768 Bacteria 10036182
249 2786667096 2786546132 Bacteria 10419719
250 2808846723 2808606359 Bacteria 9866990
251 2812361658 2811994879 Bacteria 9313447
252 2812477124 2811994917 Bacteria 7761064
253 2852643185 2852635781 Bacteria 8251373
254 2862282278 2862281513 Bacteria 9621493
255 2862392878 2862382967 Bacteria 10317375
256 2863410492 2863404153 Bacteria 9672205
257 2895883507 2895880812 Bacteria 11255272
258 2912726867 2912723979 Bacteria 8557534
259 2919468830 2919468124 Bacteria 9133025
260 2946064507 2946064051 Bacteria 8957905
261 2946072927 2946072368 Bacteria 8999607
262 2947224453 2947224130 Bacteria 9938529
263 2954389737 2954380949 Bacteria 10050426
264 2954682181 2954673503 Bacteria 9685905
265 2954690743 2954682443 Bacteria 9862841
266 2954700579 2954691527 Bacteria 10720516
267 2954701650 2954701450 Bacteria 10834262
268 8008564411 8008558824 Bacteria 10610750
269 8033688305 8033684223 Bacteria 6906479
270 8048408624 8048406513 Bacteria 8936924
271 Ga0068855_100066324
272 Ga0006562J51391_1101203
273 Ga0070713_100307091
274 Ga0070662_101247416
275 Ga0070706_100132433
276 Ga0070698_100007051
277 Ga0068853_100005498
278 Ga0070717_10020794
279 Ga0075365_10496208
280 Ga0075368_10013263
281 Ga0070715_10191653
282 Ga0075367_10000602
283 Ga0075370_10459834
284 Ga0157372_10293899
285 Ga0209758_1001121
286 Ga0207647_10004105
287 Ga0207685_10156464
288 Ga0207684_10002297
289 Ga0207684_10115437
290 Ga0207706_11187729
291 Ga0207667_10051213
292 Ga0209813_10030391
293 Ga0307517_10153311
294 Ga0307517_10381360
295 Ga0307515_10000787
296 Ga0307515_10046886
297 Ga0307515_10060979
298 Ga0265338_10006296
299 Ga0307511_10007996
300 Ga0307511_10041132
301 Ga0307512_10001951
302 Ga0307512_10003372
303 Ga0307512_10004917
304 Ga0307513_10002153
305 Ga0307513_10002915
306 Ga0307509_10004735
307 Ga0307509_10023792
308 Ga0307508_10010803
309 Ga0307508_10016934
310 Ga0307508_10040661
311 Ga0307508_10459428
312 Ga0307514_10001855
313 Ga0307514_10122620
314 Ga0307514_10124573
315 Ga0307514_10154335
316 Ga0307514_10199042
317 Ga0307514_10215861
318 Ga0307514_10217336
319 Ga0307516_10009196
320 Ga0307516_10155534
321 Ga0307516_10233261
322 Ga0307518_10104724
323 Ga0307507_10005137
324 Ga0307510_10016318
325 Ga0307510_10083274
326 Ga0307510_10179033
327 Ga0307510_10209556
328 Ga0307510_10228726
329 Ga0395900_0071452
330 Ga0395900_0136801
331 Ga0395898_0001645
332 Ga0395898_0382744
333 Ga0395905_0227367
334 Ga0395901_0325709
335 Ga0451843_1106074
336 Ga0451853_0800817
337 Ga0439433_0000738
338 Ga0439449_0155372
339 Ga0439449_0326474
340 Ga0439457_004119
341 Ga0439462_0001956
342 Ga0450903_001556
343 Ga0439458_0000484
344 Ga0466972_0007106
345 Ga0466972_0172007
346 Ga0466965_0021882
347 Ga0466966_0021968
348 Ga0466966_0450998
349 Ga0466971_0023910
350 Ga0466970_0639698
351 Ga0466960_0011740
352 Ga0466960_0072390
353 Ga0466958_0849999
354 Ga0495603_0072813
355 Ga0495629_0015294
356 Ga0495629_0035046
357 Ga0495638_0145373
358 Ga0495651_0339474
359 Ga0495605_0009676
360 Ga0495585_0048271
361 Ga0495594_0007186
362 Ga0495594_0175168
363 Ga0495594_0193906
364 Ga0495607_0080937
365 Ga0495583_0044195
366 Ga0495583_0049792
367 Ga0495606_0005397
368 Ga0495606_0115652
369 Ga0495616_0007996
370 Ga0495618_0222519
371 Ga0495620_0005928
372 Ga0495620_0017037
373 Ga0495620_0035846
374 Ga0495628_0061211
375 Ga0495631_0003531
376 Ga0495643_0001250
377 Ga0495644_0116565
378 Ga0495648_0062631
379 Ga0495666_0067768
380 Ga0495652_0043882
381 Ga0495652_0112987
382 Ga0495652_0606148
383 Ga0495640_0083519
384 Ga0495640_0575537
385 Ga0495609_0116796
386 Ga0495597_0045781
387 Ga0495597_0079865
388 Ga0495633_0107074
389 Ga0495667_0115526
390 Ga0495668_0009583
391 Ga0495668_0010932
392 Ga0495634_0328516
393 Ga0495611_0018675
394 Ga0495611_0242973
395 Ga0495625_0050267
396 Ga0495625_0063286
397 Ga0495625_0089847
398 Ga0495661_0247890
399 Ga0495588_0013334
400 Ga0495588_0057244
401 Ga0495657_0015113
402 Ga0495657_0023182
403 Ga0495657_0023860
404 Ga0495599_0118935
405 Ga0495599_0682079
406 Ga0495613_0012985
407 Ga0495613_0013938
408 Ga0495613_0014228
409 Ga0495613_0027741
410 Ga0495613_0187484
411 Ga0495624_0050577
412 Ga0495624_0292076
413 Ga0495670_0007447
414 Ga0495671_0002101
415 Ga0495671_0253992
416 Ga0495649_0009085
417 Ga0495589_0005529
418 Ga0495589_0026004
419 Ga0495589_0058701
420 Ga0495589_0061095
421 Ga0495660_0028758
422 Ga0495660_0140747
423 Ga0495660_0184119
424 Ga0495604_0065386
425 Ga0495604_0082429
426 Ga0495636_0002154
427 Ga0495636_0066853
428 Ga0495636_0467436
429 Ga0495674_0356236
430 Ga0495676_0022359
431 Ga0495676_0324495
432 Ga0495676_0518043
433 Ga0495680_0025702
434 Ga0495680_0043861
435 Ga0495683_0042285
436 Ga0495683_0053988
437 Ga0495687_001441
438 Ga0495687_013503
439 Ga0495687_017892
440 Ga0495687_021880
441 Ga0495687_023911
442 Ga0495687_040529
443 Ga0495687_043269
444 Ga0495687_059798
445 Ga0495675_0607301
446 Ga0495685_004299
447 Ga0495685_041347
448 Ga0495685_062060
449 Ga0495681_0012185
450 Ga0495681_0067444
451 Ga0495686_0084095
452 Ga0495593_0019080
453 Ga0495614_0011303
454 Ga0495614_0040283
455 Ga0495614_0269882
456 Ga0495626_0063537
457 Ga0495682_0053725
458 Ga0501032_0237972
459 Ga0501033_0100679
460 Ga0501034_0040549
461 Ga0501036_0003690
462 Ga0501036_0114601
463 Ga0501036_0665403
464 Ga0501038_0001154
465 Ga0501038_0111713
466 Ga0501039_0011840
467 Ga0501039_0952217
468 Ga0501043_0000358
469 Ga0501043_0705818
470 Ga0501047_0057821
471 Ga0501047_0152172
472 Ga0501048_0527870
473 Ga0501048_0667920
474 Ga0501069_0102912
475 Ga0501070_0255960
476 Ga0501070_0837299
477 Ga0501073_0271081
478 Ga0501074_0197588
479 Ga0501035_0064577
480 Ga0501035_0119270
481 Ga0501044_0283384
482 nmdc:mga0yw44_109774_c1
483 nmdc:mga06z11_1415_c1
484 nmdc:mga04h51_18012_c1
485 Ga0495612_0302698
486 Ga0500610_0077849
487 Ga0500578_0056160
488 Ga0500644_0044354
489 Ga0500583_0032686
490 Ga0500651_0025160
491 Ga0500566_0025452
492 Ga0500560_011435
493 Ga0500569_067294
494 Ga0500594_0003609
495 Ga0500614_212915
496 Ga0500652_004520
497 Ga0500652_134525
498 Ga0500561_0008852
499 Ga0500573_0288508
500 Ga0500579_092427
501 Ga0500588_0078038
502 Ga0500600_0076429
503 Ga0500600_0086599
504 Ga0500616_0024055
505 Ga0500633_0022758
506 Ga0500634_0177713
507 Ga0500587_012317
508 2585311071
509 2585313766
510 2616692961
511 2616702465
512 2643764314
513 2644266369
514 2644441014
515 2644458627
516 2644630427
517 2785339586
518 2785366117
519 2786667096
520 2808846723
521 2812361658
522 2812477124
523 2852643185
524 2862282278
525 2862392878
526 2863410492
527 2895883507
528 2912726867
529 2919468830
530 2946064507
531 2946072927
532 2947224453
533 2954389737
534 2954682181
535 2954690743
536 2954700579
537 2954701650
538 8008564411
539 8033688305
540 8048408624

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12802

MarR_2

MarR family

60

131

0.97

PF01047

MarR

MarR family

74

131

0.95

PF13463

HTH_27

Winged helix DNA-binding domain

74

140

0.95

PF09339

HTH_IclR

IclR helix-turn-helix domain

73

124

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.9464 49 110
5duk-assembly1.cif.gz_A n-terminal structure of putative dna binding transcription factor from thermoplasmatales archaeon scgc ab-539-n05 0.9399 49 100
7wqu-assembly1.cif.gz_B feoc from klebsiella pneumoniae 0.9332 49 109
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.9308 49 110
4awx-assembly1.cif.gz_B moonlighting functions of feoc in the regulation of ferrous iron transport in feo 0.9296 49 109
ID Description Score Start End Superfamily
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9561 47 108 1.10.10.10
5dukB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.954 50 90 1.10.10.10
4lb5A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9465 49 110 1.10.10.10
af_Q58948_3_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9316 47 122 1.10.10.10
4lb5A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9308 49 110 1.10.10.10
ID Description Score Start End GO Terms
AF-M3FGK3-F1-model_v4 MarR family transcriptional regulator 0.9679 17 163 GO:0003700
GO:0006950
AF-A0A8B0F955-F1-model_v4 deleted 0.9511 17 165
AF-A0A5P8KIP8-F1-model_v4 MarR family transcriptional regulator 0.9431 17 172 GO:0003700
GO:0006950
AF-A0A6H1NN26-F1-model_v4 MarR family transcriptional regulator 0.9429 17 171 GO:0003700
GO:0006950
AF-M3FGK3-F1-model_v4 MarR family transcriptional regulator 0.9429 17 163 GO:0003700
GO:0006950

Map