F376761

General Info

Members Datasets Scaffolds Average Seq Length
270 183 540 352

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100280287|Ga0070713_1002802871
Length 375
Sequence MAPKKGEHTIIDVCGRDLRVSNADRVIFPPAEGSRAVTKLDLVNYYLAVGDGIMRALQRRPTTLERWPKGVHPGIVPSTREKGGGDAFFQKRVPRGAPEYVQTATIEFPSGRTADEVCPTELAVVGWAAQMGTITFHPWPVRREDLNHPDELRIDLDPQRGTDFADAVRVAAEARALLEELGYIGFPKTSGGRGVHIYVRIEPRWTFTDMRHAAIAFGRELERRLPGQVTTNWWKEERGKRIFVDYNQNARDRTIASAYSVRPKPGAPVSAPLAWEELEQVVPEDFTVASMPARFAEVGDRHAGIDDTAHSLEPLLEMYERDFAEGRGDMPYPPDYPKMPGEPPRVQPSRARKHVQTKEPAGALGDHGGDAERSP

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
165 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
166 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
173 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
174 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
175 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
176 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
177 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
178 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
179 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
180 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
181 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
182 2891562705 Microbispora tritici MT50 Isolate Unclassified
183 2895427314 Nonomuraea sp. PA05 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.56
Metatranscriptomes 0
Isolates 4.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.96
Nodule 0
Rhizoplane 7.78
Rhizosphere 78.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100280287 3300005436 Bacteria 1529
2 JGI25407J50210_10008929 3300003373 Bacteria 2531
3 JGI25407J50210_10009307 3300003373 Bacteria 2486
4 Ga0070683_100231726 3300005329 Bacteria 1756
5 Ga0070690_100104474 3300005330 Bacteria 1882
6 Ga0070660_100017393 3300005339 Bacteria 5241
7 Ga0070689_100173603 3300005340 Bacteria 1747
8 Ga0070661_100016555 3300005344 Bacteria 5215
9 Ga0070659_100024249 3300005366 Bacteria 4649
10 Ga0070667_100084484 3300005367 Bacteria 2721
11 Ga0070713_100039425 3300005436 Bacteria 3834
12 Ga0070678_100024614 3300005456 Bacteria 4035
13 Ga0070681_10013468 3300005458 Bacteria 8127
14 Ga0070679_100042992 3300005530 Bacteria 4500
15 Ga0070679_100305780 3300005530 Bacteria 1540
16 Ga0068853_100268236 3300005539 Bacteria 1571
17 Ga0068856_100254478 3300005614 Bacteria 1771
18 Ga0070702_100055674 3300005615 Bacteria 2281
19 Ga0068852_100008886 3300005616 Bacteria 7431
20 Ga0068858_100332381 3300005842 Bacteria 1453
21 Ga0081455_10004359 3300005937 Bacteria 15931
22 Ga0081455_10037925 3300005937 Bacteria 4270
23 Ga0081455_10090274 3300005937 Bacteria 2485
24 Ga0081538_10000167 3300005981 Bacteria 70351
25 Ga0081538_10000454 3300005981 Bacteria 46044
26 Ga0081538_10002954 3300005981 Bacteria 16231
27 Ga0081538_10003815 3300005981 Bacteria 14081
28 Ga0081538_10018030 3300005981 Bacteria 5326
29 Ga0081538_10023287 3300005981 Bacteria 4457
30 Ga0081540_1000499 3300005983 Bacteria 38575
31 Ga0081539_10049558 3300005985 Bacteria 2382
32 Ga0070717_10017466 3300006028 Bacteria 5583
33 Ga0075365_10005647 3300006038 Bacteria 6774
34 Ga0070712_100010219 3300006175 Bacteria 5918
35 Ga0075428_100024322 3300006844 Bacteria 6701
36 Ga0075428_100127246 3300006844 Bacteria 2772
37 Ga0075430_100007816 3300006846 Bacteria 9035
38 Ga0075430_100017793 3300006846 Bacteria 6050
39 Ga0075431_100029110 3300006847 Bacteria 5682
40 Ga0075431_100448111 3300006847 Bacteria 1287
41 Ga0075433_10011882 3300006852 Bacteria 7015
42 Ga0075429_100296814 3300006880 Bacteria 1415
43 Ga0075435_100085404 3300007076 Bacteria 2598
44 Ga0105240_10022700 3300009093 Bacteria 8314
45 Ga0111539_10065499 3300009094 Bacteria 4292
46 Ga0105247_10088027 3300009101 Bacteria 1967
47 Ga0114129_10012141 3300009147 Bacteria 12265
48 Ga0105241_10024143 3300009174 Bacteria 4515
49 Ga0105242_10088841 3300009176 Bacteria 2597
50 Ga0105242_10363918 3300009176 Bacteria 1339
51 Ga0105248_10011958 3300009177 Bacteria 9570
52 Ga0105249_10303251 3300009553 Bacteria 1603
53 Ga0157369_10223373 3300013105 Bacteria 1971
54 Ga0157372_10066099 3300013307 Bacteria 4062
55 Ga0157375_10155371 3300013308 Bacteria 2426
56 Ga0163163_10248346 3300014325 Bacteria 1830
57 Ga0157379_10024575 3300014968 Bacteria 5348
58 Ga0157376_10110732 3300014969 Bacteria 2416
59 Ga0213876_10010620 3300021384 Bacteria 4934
60 Ga0213875_10034235 3300021388 Bacteria 2398
61 Ga0213875_10034238 3300021388 Bacteria 2398
62 Ga0207693_10000696 3300025915 Bacteria 30225
63 Ga0207660_10169147 3300025917 Bacteria 1691
64 Ga0207657_10024643 3300025919 Bacteria 5565
65 Ga0207652_10234341 3300025921 Bacteria 1654
66 Ga0207694_10049775 3300025924 Bacteria 3243
67 Ga0207700_10019384 3300025928 Bacteria 4593
68 Ga0207664_10017967 3300025929 Bacteria 5197
69 Ga0207686_10028084 3300025934 Bacteria 3303
70 Ga0207709_10017296 3300025935 Bacteria 4023
71 Ga0207661_10018310 3300025944 Bacteria 5203
72 Ga0207678_10358925 3300026067 Bacteria 1257
73 Ga0207641_10377568 3300026088 Bacteria 1357
74 Ga0207676_10222376 3300026095 Bacteria 1682
75 Ga0207683_10003230 3300026121 Bacteria 14222
76 Ga0207698_10011498 3300026142 Bacteria 5741
77 Ga0268266_10065609 3300028379 Bacteria 3138
78 Ga0265338_10002822 3300028800 Bacteria 25368
79 Ga0265338_10068642 3300028800 Bacteria 3052
80 Ga0307509_10144081 3300031507 Bacteria 2312
81 Ga0307405_10004006 3300031731 Bacteria 6905
82 Ga0307413_10001577 3300031824 Bacteria 8780
83 Ga0307410_10003397 3300031852 Bacteria 7981
84 Ga0307406_10021767 3300031901 Bacteria 3796
85 Ga0307406_10034139 3300031901 Bacteria 3119
86 Ga0307409_100003541 3300031995 Bacteria 8514
87 Ga0307409_100052220 3300031995 Bacteria 3132
88 Ga0307416_100030706 3300032002 Bacteria 4035
89 Ga0307416_100046210 3300032002 Bacteria 3434
90 Ga0307416_100057882 3300032002 Bacteria 3139
91 Ga0307416_100058001 3300032002 Bacteria 3136
92 Ga0307414_10051582 3300032004 Bacteria 2857
93 Ga0307415_100013469 3300032126 Bacteria 4774
94 Ga0307415_100087048 3300032126 Bacteria 2249
95 Ga0373924_0075234 3300035410 Bacteria 1429
96 Ga0373947_0113469 3300035725 Bacteria 1715
97 Ga0395899_0051992 3300037312 Bacteria 3039
98 Ga0395898_0002556 3300037466 Bacteria 21342
99 Ga0395898_0061921 3300037466 Bacteria 3635
100 Ga0395905_0032414 3300037471 Bacteria 4914
101 Ga0436364_0365633 3300037853 Bacteria 2971
102 Ga0436364_0824594 3300037853 Bacteria 2114
103 Ga0436364_0842370 3300037853 Bacteria 4740
104 Ga0436364_1087758 3300037853 Bacteria 2920
105 Ga0436364_1436221 3300037853 Bacteria 14944
106 Ga0395901_0001526 3300038443 Bacteria 24028
107 Ga0395901_0038786 3300038443 Bacteria 4927
108 Ga0436365_0184904 3300039437 Bacteria 12539
109 Ga0436365_1027202 3300039437 Bacteria 9702
110 Ga0436365_1787755 3300039437 Bacteria 4618
111 Ga0436360_0053215 3300039438 Bacteria 1873
112 Ga0436361_1142498 3300039447 Bacteria 1576
113 Ga0436363_0608839 3300039450 Bacteria 4487
114 Ga0436363_0704667 3300039450 Bacteria 1881
115 Ga0436363_1271820 3300039450 Bacteria 2167
116 Ga0436363_1508850 3300039450 Bacteria 2954
117 Ga0436363_1674390 3300039450 Bacteria 51173
118 Ga0436362_0436480 3300039453 Bacteria 2772
119 Ga0436362_0472061 3300039453 Bacteria 2737
120 Ga0466969_0010390 3300044656 Bacteria 4935
121 Ga0466972_0010104 3300044658 Bacteria 4742
122 Ga0466966_0018983 3300044684 Bacteria 4531
123 Ga0466966_0111374 3300044684 Bacteria 1687
124 Ga0466961_0008744 3300044693 Bacteria 6458
125 Ga0466961_0035973 3300044693 Bacteria 3179
126 Ga0466963_0007854 3300044694 Bacteria 6385
127 Ga0466968_0028640 3300044735 Bacteria 2298
128 Ga0466970_0003826 3300044765 Bacteria 7371
129 Ga0466970_0174994 3300044765 Bacteria 1190
130 Ga0466957_0048196 3300044842 Bacteria 2590
131 Ga0466960_0000504 3300044901 Bacteria 13360
132 Ga0466959_0212964 3300045049 Bacteria 1342
133 Ga0466958_0055808 3300045836 Bacteria 2398
134 Ga0466958_0066551 3300045836 Bacteria 2200
135 Ga0466967_0001248 3300045976 Bacteria 14386
136 Ga0466967_0008455 3300045976 Bacteria 7545
137 Ga0466967_0022033 3300045976 Bacteria 5190
138 Ga0466967_0057085 3300045976 Bacteria 3445
139 Ga0466967_0157003 3300045976 Bacteria 2132
140 Ga0466967_0160917 3300045976 Bacteria 2107
141 Ga0466967_0244711 3300045976 Bacteria 1711
142 Ga0466967_0313400 3300045976 Bacteria 1512
143 Ga0495592_0036442 3300046454 Bacteria 3705
144 Ga0495592_0075802 3300046454 Bacteria 2442
145 Ga0495603_0045686 3300046455 Bacteria 2611
146 Ga0495651_0003759 3300046462 Bacteria 11612
147 Ga0495653_0026890 3300046463 Bacteria 4609
148 Ga0495608_0007844 3300046511 Bacteria 7505
149 Ga0495608_0073415 3300046511 Bacteria 2231
150 Ga0495628_0019433 3300046516 Bacteria 5617
151 Ga0495642_0086684 3300046528 Bacteria 1323
152 Ga0495652_0049263 3300046529 Bacteria 3607
153 Ga0495640_0161220 3300046533 Bacteria 1437
154 Ga0495634_0032357 3300046642 Bacteria 3597
155 Ga0495635_0029777 3300046663 Bacteria 3797
156 Ga0495588_0161299 3300046674 Bacteria 1186
157 Ga0495657_0003745 3300046675 Bacteria 12307
158 Ga0495657_0174339 3300046675 Bacteria 1323
159 Ga0495623_0013905 3300046679 Bacteria 5218
160 Ga0495613_0175303 3300046689 Bacteria 1520
161 Ga0495600_0011167 3300046809 Bacteria 5592
162 Ga0495604_0002122 3300047317 Bacteria 15964
163 Ga0495604_0219943 3300047317 Bacteria 1308
164 Ga0495674_0019502 3300047319 Bacteria 6291
165 Ga0495674_0121297 3300047319 Bacteria 2208
166 Ga0495674_0171350 3300047319 Bacteria 1811
167 Ga0495680_0044244 3300047322 Bacteria 3521
168 Ga0495675_0088101 3300047444 Bacteria 1950
169 Ga0495684_0065556 3300047471 Bacteria 2761
170 Ga0495614_0106492 3300048089 Bacteria 1229
171 Ga0496100_0233493 3300048903 Bacteria 1354
172 Ga0496101_0002026 3300048904 Bacteria 12311
173 Ga0496101_0005973 3300048904 Bacteria 7805
174 Ga0496104_0004779 3300048907 Bacteria 11796
175 Ga0496105_0011974 3300048908 Bacteria 6868
176 Ga0496105_0037804 3300048908 Bacteria 3976
177 Ga0496105_0191852 3300048908 Bacteria 1670
178 Ga0496106_0006830 3300048909 Bacteria 8448
179 Ga0496107_0004359 3300048910 Bacteria 9582
180 Ga0496108_0129472 3300048911 Bacteria 2169
181 Ga0496108_0251184 3300048911 Bacteria 1539
182 Ga0496109_0048775 3300048912 Bacteria 3853
183 Ga0496109_0182381 3300048912 Bacteria 1972
184 Ga0496109_0321266 3300048912 Bacteria 1461
185 Ga0496109_0355456 3300048912 Bacteria 1384
186 Ga0496112_0182727 3300048915 Bacteria 2061
187 Ga0496114_0038625 3300048917 Bacteria 3951
188 Ga0496114_0052360 3300048917 Bacteria 3401
189 Ga0496115_0022147 3300048918 Bacteria 4918
190 Ga0496115_0035857 3300048918 Bacteria 3927
191 Ga0496115_0138754 3300048918 Bacteria 2005
192 Ga0496121_0087293 3300048924 Bacteria 2449
193 Ga0501031_0054907 3300049568 Bacteria 2595
194 Ga0501031_0148894 3300049568 Bacteria 1529
195 Ga0501032_0009240 3300049569 Bacteria 7146
196 Ga0501033_0107404 3300049570 Bacteria 2033
197 Ga0501036_0007936 3300049572 Bacteria 8686
198 Ga0501036_0017236 3300049572 Bacteria 6036
199 Ga0501036_0024639 3300049572 Bacteria 5073
200 Ga0501036_0117041 3300049572 Bacteria 2251
201 Ga0501036_0120472 3300049572 Bacteria 2216
202 Ga0501037_0003135 3300049573 Bacteria 11996
203 Ga0501038_0016299 3300049574 Bacteria 6738
204 Ga0501039_0012460 3300049575 Bacteria 6492
205 Ga0501039_0244848 3300049575 Bacteria 1410
206 Ga0501040_0014234 3300049576 Bacteria 5239
207 Ga0501041_0032011 3300049577 Bacteria 3178
208 Ga0501041_0035900 3300049577 Bacteria 3004
209 Ga0501042_0008997 3300049578 Bacteria 6634
210 Ga0501043_0004634 3300049579 Bacteria 11148
211 Ga0501043_0131741 3300049579 Bacteria 1959
212 Ga0501046_0002659 3300049580 Bacteria 16677
213 Ga0501046_0004226 3300049580 Bacteria 13062
214 Ga0501047_0260332 3300049581 Bacteria 1582
215 Ga0501048_0000846 3300049582 Bacteria 22534
216 Ga0501048_0038684 3300049582 Bacteria 3423
217 Ga0501070_0025725 3300049586 Bacteria 4937
218 Ga0501070_0134785 3300049586 Bacteria 2039
219 Ga0501071_0026645 3300049587 Bacteria 4059
220 Ga0501071_0041206 3300049587 Bacteria 3307
221 Ga0501072_0014406 3300049588 Bacteria 6061
222 Ga0501072_0067062 3300049588 Bacteria 2831
223 Ga0501074_0051342 3300049590 Bacteria 2976
224 Ga0501074_0089382 3300049590 Bacteria 2206
225 Ga0501076_0008042 3300049592 Bacteria 7706
226 Ga0501076_0040222 3300049592 Bacteria 3673
227 Ga0501076_0103223 3300049592 Bacteria 2300
228 Ga0501079_0022333 3300049741 Bacteria 4851
229 Ga0501079_0050816 3300049741 Bacteria 3199
230 Ga0501080_0130102 3300049742 Bacteria 2330
231 Ga0501081_0027141 3300049743 Bacteria 3864
232 Ga0501035_0031976 3300049822 Bacteria 4792
233 Ga0501035_0061313 3300049822 Bacteria 3347
234 Ga0501035_0204470 3300049822 Bacteria 1692
235 Ga0501044_0202336 3300049823 Bacteria 1943
236 Ga0501045_0125535 3300049824 Bacteria 1906
237 nmdc:mga0yw44_19334_c1 3300050492 Bacteria 3754
238 nmdc:mga05p37_19342_c1 3300050507 Bacteria 8237
239 nmdc:mga0qj67_48225_c1 3300050509 Bacteria 3365
240 nmdc:mga0qj67_53567_c1 3300050509 Bacteria 3194
241 nmdc:mga06r32_53289_c1 3300050510 Bacteria 3875
242 nmdc:mga06r32_53523_c1 3300050510 Bacteria 3867
243 nmdc:mga08y16_491172_c1 3300050511 Bacteria 1248
244 nmdc:mga0rr50_24356_c1 3300050513 Bacteria 4191
245 nmdc:mga0a205_16167_c1 3300050515 Bacteria 6987
246 Ga0495619_0002285 3300053085 Bacteria 12638
247 Ga0495619_0010244 3300053085 Bacteria 5903
248 Ga0500556_0000464 3300053104 Bacteria 28558
249 Ga0500556_0000762 3300053104 Bacteria 19126
250 Ga0500593_000356 3300053117 Bacteria 18479
251 Ga0500628_000003 3300053129 Bacteria 204304
252 Ga0500616_0002023 3300053153 Bacteria 17895
253 Ga0500599_000602 3300053736 Bacteria 3810
254 Ga0501084_0134793 3300054114 Bacteria 2079
255 Ga0501082_0220916 3300060353 Bacteria 1648
256 Ga0501082_0289887 3300060353 Bacteria 1425
257 Ga0501082_0358510 3300060353 Bacteria 1272
258 Ga0530510_0004024 3300061734 Bacteria 10147
259 2515854311 2515154155 Bacteria 7985436
260 2676490791 2675903060 Bacteria 10051191
261 2831935861 2831935698 Bacteria 5963223
262 2832010832 2832004796 Bacteria 6538017
263 2856746136 2856741275 Bacteria 8096094
264 2866068258 2866065130 Bacteria 6518152
265 2867511580 2867507094 Bacteria 6506033
266 2884701346 2884693830 Bacteria 11273186
267 2891403380 2891395885 Bacteria 9251614
268 2891556870 2891554331 Bacteria 8812224
269 2891567544 2891562705 Bacteria 8039471
270 2895437230 2895427314 Bacteria 13147766
271 Ga0070713_100280287
272 JGI25407J50210_10008929
273 JGI25407J50210_10009307
274 Ga0070683_100231726
275 Ga0070690_100104474
276 Ga0070660_100017393
277 Ga0070689_100173603
278 Ga0070661_100016555
279 Ga0070659_100024249
280 Ga0070667_100084484
281 Ga0070713_100039425
282 Ga0070678_100024614
283 Ga0070681_10013468
284 Ga0070679_100042992
285 Ga0070679_100305780
286 Ga0068853_100268236
287 Ga0068856_100254478
288 Ga0070702_100055674
289 Ga0068852_100008886
290 Ga0068858_100332381
291 Ga0081455_10004359
292 Ga0081455_10037925
293 Ga0081455_10090274
294 Ga0081538_10000167
295 Ga0081538_10000454
296 Ga0081538_10002954
297 Ga0081538_10003815
298 Ga0081538_10018030
299 Ga0081538_10023287
300 Ga0081540_1000499
301 Ga0081539_10049558
302 Ga0070717_10017466
303 Ga0075365_10005647
304 Ga0070712_100010219
305 Ga0075428_100024322
306 Ga0075428_100127246
307 Ga0075430_100007816
308 Ga0075430_100017793
309 Ga0075431_100029110
310 Ga0075431_100448111
311 Ga0075433_10011882
312 Ga0075429_100296814
313 Ga0075435_100085404
314 Ga0105240_10022700
315 Ga0111539_10065499
316 Ga0105247_10088027
317 Ga0114129_10012141
318 Ga0105241_10024143
319 Ga0105242_10088841
320 Ga0105242_10363918
321 Ga0105248_10011958
322 Ga0105249_10303251
323 Ga0157369_10223373
324 Ga0157372_10066099
325 Ga0157375_10155371
326 Ga0163163_10248346
327 Ga0157379_10024575
328 Ga0157376_10110732
329 Ga0213876_10010620
330 Ga0213875_10034235
331 Ga0213875_10034238
332 Ga0207693_10000696
333 Ga0207660_10169147
334 Ga0207657_10024643
335 Ga0207652_10234341
336 Ga0207694_10049775
337 Ga0207700_10019384
338 Ga0207664_10017967
339 Ga0207686_10028084
340 Ga0207709_10017296
341 Ga0207661_10018310
342 Ga0207678_10358925
343 Ga0207641_10377568
344 Ga0207676_10222376
345 Ga0207683_10003230
346 Ga0207698_10011498
347 Ga0268266_10065609
348 Ga0265338_10002822
349 Ga0265338_10068642
350 Ga0307509_10144081
351 Ga0307405_10004006
352 Ga0307413_10001577
353 Ga0307410_10003397
354 Ga0307406_10021767
355 Ga0307406_10034139
356 Ga0307409_100003541
357 Ga0307409_100052220
358 Ga0307416_100030706
359 Ga0307416_100046210
360 Ga0307416_100057882
361 Ga0307416_100058001
362 Ga0307414_10051582
363 Ga0307415_100013469
364 Ga0307415_100087048
365 Ga0373924_0075234
366 Ga0373947_0113469
367 Ga0395899_0051992
368 Ga0395898_0002556
369 Ga0395898_0061921
370 Ga0395905_0032414
371 Ga0436364_0365633
372 Ga0436364_0824594
373 Ga0436364_0842370
374 Ga0436364_1087758
375 Ga0436364_1436221
376 Ga0395901_0001526
377 Ga0395901_0038786
378 Ga0436365_0184904
379 Ga0436365_1027202
380 Ga0436365_1787755
381 Ga0436360_0053215
382 Ga0436361_1142498
383 Ga0436363_0608839
384 Ga0436363_0704667
385 Ga0436363_1271820
386 Ga0436363_1508850
387 Ga0436363_1674390
388 Ga0436362_0436480
389 Ga0436362_0472061
390 Ga0466969_0010390
391 Ga0466972_0010104
392 Ga0466966_0018983
393 Ga0466966_0111374
394 Ga0466961_0008744
395 Ga0466961_0035973
396 Ga0466963_0007854
397 Ga0466968_0028640
398 Ga0466970_0003826
399 Ga0466970_0174994
400 Ga0466957_0048196
401 Ga0466960_0000504
402 Ga0466959_0212964
403 Ga0466958_0055808
404 Ga0466958_0066551
405 Ga0466967_0001248
406 Ga0466967_0008455
407 Ga0466967_0022033
408 Ga0466967_0057085
409 Ga0466967_0157003
410 Ga0466967_0160917
411 Ga0466967_0244711
412 Ga0466967_0313400
413 Ga0495592_0036442
414 Ga0495592_0075802
415 Ga0495603_0045686
416 Ga0495651_0003759
417 Ga0495653_0026890
418 Ga0495608_0007844
419 Ga0495608_0073415
420 Ga0495628_0019433
421 Ga0495642_0086684
422 Ga0495652_0049263
423 Ga0495640_0161220
424 Ga0495634_0032357
425 Ga0495635_0029777
426 Ga0495588_0161299
427 Ga0495657_0003745
428 Ga0495657_0174339
429 Ga0495623_0013905
430 Ga0495613_0175303
431 Ga0495600_0011167
432 Ga0495604_0002122
433 Ga0495604_0219943
434 Ga0495674_0019502
435 Ga0495674_0121297
436 Ga0495674_0171350
437 Ga0495680_0044244
438 Ga0495675_0088101
439 Ga0495684_0065556
440 Ga0495614_0106492
441 Ga0496100_0233493
442 Ga0496101_0002026
443 Ga0496101_0005973
444 Ga0496104_0004779
445 Ga0496105_0011974
446 Ga0496105_0037804
447 Ga0496105_0191852
448 Ga0496106_0006830
449 Ga0496107_0004359
450 Ga0496108_0129472
451 Ga0496108_0251184
452 Ga0496109_0048775
453 Ga0496109_0182381
454 Ga0496109_0321266
455 Ga0496109_0355456
456 Ga0496112_0182727
457 Ga0496114_0038625
458 Ga0496114_0052360
459 Ga0496115_0022147
460 Ga0496115_0035857
461 Ga0496115_0138754
462 Ga0496121_0087293
463 Ga0501031_0054907
464 Ga0501031_0148894
465 Ga0501032_0009240
466 Ga0501033_0107404
467 Ga0501036_0007936
468 Ga0501036_0017236
469 Ga0501036_0024639
470 Ga0501036_0117041
471 Ga0501036_0120472
472 Ga0501037_0003135
473 Ga0501038_0016299
474 Ga0501039_0012460
475 Ga0501039_0244848
476 Ga0501040_0014234
477 Ga0501041_0032011
478 Ga0501041_0035900
479 Ga0501042_0008997
480 Ga0501043_0004634
481 Ga0501043_0131741
482 Ga0501046_0002659
483 Ga0501046_0004226
484 Ga0501047_0260332
485 Ga0501048_0000846
486 Ga0501048_0038684
487 Ga0501070_0025725
488 Ga0501070_0134785
489 Ga0501071_0026645
490 Ga0501071_0041206
491 Ga0501072_0014406
492 Ga0501072_0067062
493 Ga0501074_0051342
494 Ga0501074_0089382
495 Ga0501076_0008042
496 Ga0501076_0040222
497 Ga0501076_0103223
498 Ga0501079_0022333
499 Ga0501079_0050816
500 Ga0501080_0130102
501 Ga0501081_0027141
502 Ga0501035_0031976
503 Ga0501035_0061313
504 Ga0501035_0204470
505 Ga0501044_0202336
506 Ga0501045_0125535
507 nmdc:mga0yw44_19334_c1
508 nmdc:mga05p37_19342_c1
509 nmdc:mga0qj67_48225_c1
510 nmdc:mga0qj67_53567_c1
511 nmdc:mga06r32_53289_c1
512 nmdc:mga06r32_53523_c1
513 nmdc:mga08y16_491172_c1
514 nmdc:mga0rr50_24356_c1
515 nmdc:mga0a205_16167_c1
516 Ga0495619_0002285
517 Ga0495619_0010244
518 Ga0500556_0000464
519 Ga0500556_0000762
520 Ga0500593_000356
521 Ga0500628_000003
522 Ga0500616_0002023
523 Ga0500599_000602
524 Ga0501084_0134793
525 Ga0501082_0220916
526 Ga0501082_0289887
527 Ga0501082_0358510
528 Ga0530510_0004024
529 2515854311
530 2676490791
531 2831935861
532 2832010832
533 2856746136
534 2866068258
535 2867511580
536 2884701346
537 2891403380
538 2891556870
539 2891567544
540 2895437230

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21686

LigD_Prim-Pol

LigD, primase-polymerase domain

38

302

0.98

PF01896

DNA_primase_S

DNA primase small subunit

154

275

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9393 5 308
6sa1-assembly1.cif.gz_A post catalytic complex of prim-polc from mycobacterium smegmatis with gapped dna and 3'-dutp 0.9266 4 339
6sa1-assembly1.cif.gz_A post catalytic complex of prim-polc from mycobacterium smegmatis with gapped dna and 3'-dutp 0.9211 4 339
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.8972 5 308
2iry-assembly1.cif.gz_A crystal structure of the polymerase domain from mycobacterium tuberculosis ligase d with dgtp and manganese. 0.8968 17 303
ID Description Score Start End Superfamily
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9786 35 315 3.90.920.10
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9762 22 315 3.90.920.10
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9694 22 315 3.90.920.10
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9342 35 315 3.90.920.10
2iruB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9183 147 280 3.30.70.3300
ID Description Score Start End GO Terms
AF-A0A6J4SUW0-F1-model_v4 ATP-dependent DNA ligase (EC 6.5.1.1) 0.9969 1 305 GO:0003910
AF-A0A6J4SUW0-F1-model_v4 ATP-dependent DNA ligase (EC 6.5.1.1) 0.9937 1 305 GO:0003910
AF-X7ZZX9-F1-model_v4 deleted 0.9902 142 280
AF-A0A537A1M3-F1-model_v4 DNA primase 0.9868 85 266
AF-A0A3D3KRH1-F1-model_v4 ATP-dependent DNA ligase 0.9862 181 307 GO:0016874

Map