F376356

General Info

Members Datasets Scaffolds Average Seq Length
269 144 538 251

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0295665|Ga0395899_0295665_136_1002
Length 288
Sequence MDLSRVGRSRERISFGSWADRASLTEGHNPPVPEGDAIHRAARRLQPLVGERVEVETPHPRAAATGVAEQLDGRRLEGVEAVGKNLLLSFEGGLVLRSHLRMTGRWTVRARGAAGRGRPWLVLRGGAREAVLWNGPVLELNKRAVRRLGPDILATPPDFELMVANVRRGDRERAIGDLLLDQRVVAGIGNVWKTEALWLARLSPWRAAGVVTDEELRSVLGAAAELMRRSLESGMDRRAIYRAAGHPCPRCGTAIESWGQGDDNRTAYWCPKCQPGPNPKRGVARTGA

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
70 3300042119 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218L_E14_082316_1902 Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
78 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
79 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
80 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
89 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
90 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
111 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
112 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
129 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
130 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
140 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
141 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.58
Nodule 0
Rhizoplane 6.69
Rhizosphere 87.36
Stem 0
Stem Tuber 0
Unclassified 6.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0295665 3300037312 Bacteria 1097
2 JGI25406J46586_10073306 3300003203 Bacteria 1068
3 JGI25407J50210_10000041 3300003373 Bacteria 14189
4 JGI25407J50210_10007835 3300003373 Bacteria 2684
5 JGI25407J50210_10009311 3300003373 Bacteria 2486
6 JGI25407J50210_10050222 3300003373 Bacteria 1058
7 Ga0070683_100015414 3300005329 Bacteria 6713
8 Ga0070683_100205729 3300005329 Bacteria 1869
9 Ga0070670_100294951 3300005331 Bacteria 1417
10 Ga0068868_100233358 3300005338 Unclassified 1544
11 Ga0070668_100092466 3300005347 Bacteria 2386
12 Ga0070688_100023076 3300005365 Bacteria 3655
13 Ga0070659_100038392 3300005366 Bacteria 3735
14 Ga0070663_100245484 3300005455 Bacteria 1415
15 Ga0068867_100000247 3300005459 Bacteria 35692
16 Ga0070706_100095632 3300005467 Bacteria 2758
17 Ga0070684_100022755 3300005535 Bacteria 5232
18 Ga0070686_100022154 3300005544 Bacteria 3781
19 Ga0070696_100135444 3300005546 Bacteria 1795
20 Ga0068856_100322967 3300005614 Bacteria 1561
21 Ga0068859_100520011 3300005617 Bacteria 1285
22 Ga0068864_100000066 3300005618 Bacteria 116383
23 Ga0068858_100109961 3300005842 Bacteria 2573
24 Ga0081455_10002020 3300005937 Bacteria 24263
25 Ga0081455_10015378 3300005937 Bacteria 7438
26 Ga0081455_10023745 3300005937 Bacteria 5697
27 Ga0081455_10055846 3300005937 Bacteria 3356
28 Ga0081538_10000029 3300005981 Bacteria 124335
29 Ga0081538_10000184 3300005981 Bacteria 68601
30 Ga0081538_10000309 3300005981 Bacteria 56250
31 Ga0081538_10000343 3300005981 Bacteria 53068
32 Ga0081538_10001142 3300005981 Bacteria 28050
33 Ga0081538_10011562 3300005981 Bacteria 7142
34 Ga0081538_10012948 3300005981 Bacteria 6642
35 Ga0081538_10023743 3300005981 Bacteria 4398
36 Ga0081538_10033405 3300005981 Bacteria 3425
37 Ga0081538_10055129 3300005981 Bacteria 2344
38 Ga0081538_10102342 3300005981 Bacteria 1437
39 Ga0081539_10001249 3300005985 Bacteria 45085
40 Ga0075365_10019685 3300006038 Bacteria 4172
41 Ga0075365_10082602 3300006038 Bacteria 2178
42 Ga0075365_10115440 3300006038 Bacteria 1848
43 Ga0075365_10242282 3300006038 Bacteria 1266
44 Ga0075363_100025907 3300006048 Bacteria 2996
45 Ga0075364_10032114 3300006051 Bacteria 3373
46 Ga0070712_100002601 3300006175 Bacteria 11148
47 Ga0075367_10274163 3300006178 Unclassified 1060
48 Ga0075428_100309067 3300006844 Bacteria 1699
49 Ga0075428_100334752 3300006844 Bacteria 1626
50 Ga0075428_100493238 3300006844 Bacteria 1311
51 Ga0075430_100035631 3300006846 Bacteria 4222
52 Ga0097620_100520078 3300006931 Bacteria 1285
53 Ga0075435_100615331 3300007076 Bacteria 942
54 Ga0111539_10011175 3300009094 Bacteria 11287
55 Ga0105245_10350511 3300009098 Unclassified 1462
56 Ga0114129_10044415 3300009147 Bacteria 6251
57 Ga0105238_10000299 3300009551 Bacteria 54293
58 Ga0105246_10265629 3300011119 Unclassified 1369
59 Ga0157374_10002177 3300013296 Bacteria 16513
60 Ga0163163_10334352 3300014325 Bacteria 1570
61 Ga0157377_10218220 3300014745 Bacteria 1219
62 Ga0207645_10252985 3300025907 Bacteria 1166
63 Ga0207643_10149567 3300025908 Unclassified 1399
64 Ga0207684_10312997 3300025910 Bacteria 1353
65 Ga0207694_10000035 3300025924 Bacteria 195870
66 Ga0207650_10234965 3300025925 Bacteria 1480
67 Ga0207659_10736617 3300025926 Unclassified 845
68 Ga0207706_10075689 3300025933 Bacteria 2960
69 Ga0207661_10003394 3300025944 Bacteria 11055
70 Ga0207661_10007802 3300025944 Bacteria 7623
71 Ga0207661_10065590 3300025944 Bacteria 2948
72 Ga0207661_10090488 3300025944 Bacteria 2548
73 Ga0207661_10581977 3300025944 Unclassified 1027
74 Ga0207679_10159926 3300025945 Bacteria 1843
75 Ga0207668_10083908 3300025972 Bacteria 2320
76 Ga0207703_10285158 3300026035 Bacteria 1501
77 Ga0207678_10153719 3300026067 Bacteria 1965
78 Ga0207648_10000230 3300026089 Bacteria 59713
79 Ga0207676_10000038 3300026095 Bacteria 171492
80 Ga0207674_10185849 3300026116 Bacteria 2029
81 Ga0268264_10116956 3300028381 Bacteria 2344
82 Ga0307408_100071808 3300031548 Bacteria 2561
83 Ga0307410_10056370 3300031852 Bacteria 2672
84 Ga0307406_10008461 3300031901 Bacteria 5742
85 Ga0307406_10018392 3300031901 Bacteria 4083
86 Ga0307409_100039256 3300031995 Bacteria 3511
87 Ga0307416_100002007 3300032002 Bacteria 11438
88 Ga0307416_101277454 3300032002 Bacteria 840
89 Ga0307411_10298589 3300032005 Bacteria 1291
90 Ga0307415_100036342 3300032126 Bacteria 3226
91 Ga0373937_0029395 3300036401 Bacteria 4977
92 Ga0395900_0024844 3300037418 Bacteria 6133
93 Ga0395900_0032857 3300037418 Bacteria 5337
94 Ga0395900_0159843 3300037418 Unclassified 2298
95 Ga0395900_0316151 3300037418 Bacteria 1543
96 Ga0395898_0006139 3300037466 Bacteria 12878
97 Ga0395898_0030818 3300037466 Bacteria 5365
98 Ga0395898_0097620 3300037466 Unclassified 2821
99 Ga0395898_0229115 3300037466 Bacteria 1772
100 Ga0395905_0002878 3300037471 Bacteria 18801
101 Ga0395905_0635513 3300037471 Bacteria 969
102 Ga0395901_0010325 3300038443 Bacteria 9457
103 Ga0395901_0020138 3300038443 Bacteria 6827
104 Ga0395901_0075114 3300038443 Bacteria 3526
105 Ga0395901_0101995 3300038443 Bacteria 3011
106 Ga0436365_0803019 3300039437 Bacteria 896
107 Ga0439439_0047241 3300041406 Bacteria 1125
108 Ga0450915_000815 3300042119 Bacteria 1291
109 Ga0466966_0026470 3300044684 Bacteria 3785
110 Ga0466963_0212141 3300044694 Bacteria 1355
111 Ga0466960_0006162 3300044901 Bacteria 4800
112 Ga0466967_0007205 3300045976 Bacteria 7990
113 Ga0466967_0827781 3300045976 Bacteria 919
114 Ga0495641_0000001 3300046461 Bacteria 485224
115 Ga0495608_0041941 3300046511 Bacteria 3061
116 Ga0495620_0001840 3300046515 Bacteria 12507
117 Ga0495644_0104257 3300046523 Bacteria 1074
118 Ga0495598_0000668 3300046537 Bacteria 6502
119 Ga0495656_0206492 3300046615 Bacteria 977
120 Ga0495625_0000117 3300046660 Bacteria 121901
121 Ga0495600_0023618 3300046809 Bacteria 3956
122 Ga0495604_0050587 3300047317 Bacteria 3226
123 Ga0496101_0064462 3300048904 Unclassified 2669
124 Ga0496102_0184055 3300048905 Bacteria 1968
125 Ga0496104_0367927 3300048907 Unclassified 1350
126 Ga0496105_0141530 3300048908 Bacteria 1980
127 Ga0496106_0042468 3300048909 Bacteria 3410
128 Ga0496106_0263087 3300048909 Bacteria 1380
129 Ga0496107_0017770 3300048910 Bacteria 5004
130 Ga0496107_0098480 3300048910 Bacteria 2142
131 Ga0496108_0000002 3300048911 Bacteria 700890
132 Ga0496108_0024555 3300048911 Bacteria 4964
133 Ga0496109_0000001 3300048912 Bacteria 700852
134 Ga0496109_0039028 3300048912 Bacteria 4297
135 Ga0496110_0001097 3300048913 Bacteria 19081
136 Ga0496110_0018646 3300048913 Bacteria 5821
137 Ga0496112_0000003 3300048915 Bacteria 660147
138 Ga0496113_0067331 3300048916 Unclassified 2715
139 Ga0496113_0146468 3300048916 Bacteria 1861
140 Ga0496113_0412986 3300048916 Unclassified 1084
141 Ga0501031_0000862 3300049568 Bacteria 18231
142 Ga0501031_0011782 3300049568 Bacteria 5704
143 Ga0501032_0007468 3300049569 Bacteria 7986
144 Ga0501032_0294866 3300049569 Bacteria 1049
145 Ga0501033_0011766 3300049570 Bacteria 6688
146 Ga0501033_0015929 3300049570 Bacteria 5695
147 Ga0501033_0493109 3300049570 Bacteria 848
148 Ga0501034_0001758 3300049571 Bacteria 27750
149 Ga0501034_0047504 3300049571 Bacteria 4334
150 Ga0501034_0057428 3300049571 Bacteria 3913
151 Ga0501034_0294198 3300049571 Bacteria 1561
152 Ga0501036_0015829 3300049572 Bacteria 6297
153 Ga0501036_0021818 3300049572 Bacteria 5383
154 Ga0501036_0055552 3300049572 Bacteria 3355
155 Ga0501037_0018931 3300049573 Bacteria 5075
156 Ga0501037_0124497 3300049573 Bacteria 1851
157 Ga0501037_0393310 3300049573 Unclassified 951
158 Ga0501038_0003483 3300049574 Bacteria 14659
159 Ga0501038_0041921 3300049574 Bacteria 3989
160 Ga0501039_0001535 3300049575 Bacteria 16962
161 Ga0501039_0006711 3300049575 Bacteria 8754
162 Ga0501039_0046681 3300049575 Bacteria 3347
163 Ga0501040_0004635 3300049576 Bacteria 8920
164 Ga0501040_0037590 3300049576 Bacteria 3289
165 Ga0501040_0145544 3300049576 Bacteria 1670
166 Ga0501041_0001018 3300049577 Bacteria 15312
167 Ga0501041_0005035 3300049577 Bacteria 7693
168 Ga0501041_0114975 3300049577 Bacteria 1670
169 Ga0501042_0033019 3300049578 Unclassified 3667
170 Ga0501042_0082924 3300049578 Bacteria 2298
171 Ga0501043_0016570 3300049579 Bacteria 5776
172 Ga0501043_0030172 3300049579 Bacteria 4260
173 Ga0501046_0000511 3300049580 Bacteria 38395
174 Ga0501046_0278633 3300049580 Bacteria 1225
175 Ga0501047_0099092 3300049581 Bacteria 2793
176 Ga0501047_0147254 3300049581 Bacteria 2231
177 Ga0501048_0002924 3300049582 Bacteria 13049
178 Ga0501048_0015300 3300049582 Bacteria 5665
179 Ga0501048_0075178 3300049582 Bacteria 2383
180 Ga0501048_0080020 3300049582 Bacteria 2306
181 Ga0501067_0008717 3300049583 Bacteria 5618
182 Ga0501067_0055279 3300049583 Bacteria 2200
183 Ga0501068_0000191 3300049584 Bacteria 28943
184 Ga0501068_0000374 3300049584 Bacteria 22601
185 Ga0501068_0003646 3300049584 Bacteria 8334
186 Ga0501068_0106766 3300049584 Bacteria 1738
187 Ga0501068_0127250 3300049584 Bacteria 1591
188 Ga0501069_0000519 3300049585 Bacteria 17612
189 Ga0501069_0004049 3300049585 Bacteria 7569
190 Ga0501069_0023596 3300049585 Bacteria 3355
191 Ga0501069_0131801 3300049585 Bacteria 1431
192 Ga0501070_0005368 3300049586 Bacteria 10931
193 Ga0501070_0010412 3300049586 Bacteria 7862
194 Ga0501070_0017584 3300049586 Bacteria 6002
195 Ga0501071_0001280 3300049587 Bacteria 14293
196 Ga0501071_0003485 3300049587 Bacteria 9826
197 Ga0501071_0020078 3300049587 Bacteria 4642
198 Ga0501071_0033640 3300049587 Bacteria 3642
199 Ga0501072_0005626 3300049588 Bacteria 9537
200 Ga0501072_0015983 3300049588 Bacteria 5754
201 Ga0501072_0059605 3300049588 Bacteria 3009
202 Ga0501072_0068042 3300049588 Bacteria 2811
203 Ga0501073_0002589 3300049589 Bacteria 13524
204 Ga0501073_0004713 3300049589 Bacteria 10245
205 Ga0501073_0013296 3300049589 Bacteria 5997
206 Ga0501073_0203727 3300049589 Bacteria 1368
207 Ga0501074_0000174 3300049590 Bacteria 34633
208 Ga0501074_0032983 3300049590 Bacteria 3752
209 Ga0501074_0106368 3300049590 Bacteria 2008
210 Ga0501075_0004761 3300049591 Bacteria 9226
211 Ga0501075_0011159 3300049591 Bacteria 6348
212 Ga0501075_0028498 3300049591 Bacteria 4122
213 Ga0501076_0012041 3300049592 Bacteria 6464
214 Ga0501076_0016737 3300049592 Bacteria 5563
215 Ga0501077_0080719 3300049593 Bacteria 2060
216 Ga0501079_0016538 3300049741 Bacteria 5634
217 Ga0501079_0025702 3300049741 Bacteria 4514
218 Ga0501080_0001469 3300049742 Bacteria 19844
219 Ga0501080_0008503 3300049742 Bacteria 9306
220 Ga0501080_0014717 3300049742 Bacteria 7203
221 Ga0501080_0028321 3300049742 Bacteria 5210
222 Ga0501080_0037556 3300049742 Bacteria 4524
223 Ga0501080_0096612 3300049742 Bacteria 2743
224 Ga0501081_0235448 3300049743 Bacteria 1334
225 Ga0501083_0000140 3300049744 Bacteria 49326
226 Ga0501083_0000321 3300049744 Bacteria 30457
227 Ga0501083_0002589 3300049744 Bacteria 12450
228 Ga0501083_0044083 3300049744 Bacteria 3020
229 Ga0501083_0045249 3300049744 Bacteria 2978
230 Ga0501035_0006248 3300049822 Bacteria 11202
231 Ga0501035_0021234 3300049822 Bacteria 5968
232 Ga0501044_0037521 3300049823 Bacteria 5065
233 Ga0501044_0387124 3300049823 Bacteria 1313
234 Ga0501044_0432041 3300049823 Bacteria 1226
235 Ga0501044_0446264 3300049823 Bacteria 1201
236 Ga0501045_0003105 3300049824 Bacteria 11358
237 Ga0501045_0065940 3300049824 Bacteria 2658
238 Ga0501045_0222907 3300049824 Bacteria 1404
239 Ga0501045_0516388 3300049824 Unclassified 887
240 nmdc:mga03683_36383_c2 3300050489 Bacteria 1506
241 nmdc:mga03n38_30218_c1 3300050490 Bacteria 2275
242 nmdc:mga00v17_41953_c1 3300050491 Bacteria 2750
243 nmdc:mga0yw44_186089_c1 3300050492 Unclassified 1368
244 nmdc:mga0yw44_23329_c1 3300050492 Bacteria 3484
245 nmdc:mga0yw44_99398_c1 3300050492 Bacteria 1851
246 nmdc:mga05p37_128104_c1 3300050507 Bacteria 3116
247 nmdc:mga05p37_58967_c1 3300050507 Bacteria 4727
248 nmdc:mga09592_118874_c1 3300050508 Bacteria 2269
249 nmdc:mga0qj67_136566_c1 3300050509 Bacteria 1987
250 nmdc:mga0qj67_150554_c1 3300050509 Bacteria 1888
251 nmdc:mga0qj67_39806_c1 3300050509 Bacteria 3693
252 nmdc:mga06r32_23356_c1 3300050510 Bacteria 5720
253 nmdc:mga08y16_202198_c1 3300050511 Bacteria 2059
254 nmdc:mga0n895_513478_c1 3300050512 Bacteria 1206
255 Ga0495601_0000096 3300053077 Bacteria 48420
256 Ga0495601_0000169 3300053077 Bacteria 35095
257 Ga0495595_0186565 3300053084 Bacteria 1030
258 Ga0500641_0001804 3300053096 Bacteria 7589
259 Ga0500614_000374 3300053123 Bacteria 11670
260 Ga0501084_0003538 3300054114 Bacteria 12678
261 Ga0501084_0005558 3300054114 Bacteria 10345
262 Ga0501084_0025213 3300054114 Bacteria 4959
263 Ga0501084_0376998 3300054114 Bacteria 1199
264 Ga0501082_0020037 3300060353 Bacteria 5763
265 Ga0501082_0025422 3300060353 Bacteria 5102
266 Ga0501082_0111761 3300060353 Bacteria 2365
267 Ga0501082_0374499 3300060353 Bacteria 1242
268 Ga0530510_0001020 3300061734 Bacteria 18561
269 Ga0530510_0029407 3300061734 Bacteria 3943
270 Ga0395899_0295665
271 JGI25406J46586_10073306
272 JGI25407J50210_10000041
273 JGI25407J50210_10007835
274 JGI25407J50210_10009311
275 JGI25407J50210_10050222
276 Ga0070683_100015414
277 Ga0070683_100205729
278 Ga0070670_100294951
279 Ga0068868_100233358
280 Ga0070668_100092466
281 Ga0070688_100023076
282 Ga0070659_100038392
283 Ga0070663_100245484
284 Ga0068867_100000247
285 Ga0070706_100095632
286 Ga0070684_100022755
287 Ga0070686_100022154
288 Ga0070696_100135444
289 Ga0068856_100322967
290 Ga0068859_100520011
291 Ga0068864_100000066
292 Ga0068858_100109961
293 Ga0081455_10002020
294 Ga0081455_10015378
295 Ga0081455_10023745
296 Ga0081455_10055846
297 Ga0081538_10000029
298 Ga0081538_10000184
299 Ga0081538_10000309
300 Ga0081538_10000343
301 Ga0081538_10001142
302 Ga0081538_10011562
303 Ga0081538_10012948
304 Ga0081538_10023743
305 Ga0081538_10033405
306 Ga0081538_10055129
307 Ga0081538_10102342
308 Ga0081539_10001249
309 Ga0075365_10019685
310 Ga0075365_10082602
311 Ga0075365_10115440
312 Ga0075365_10242282
313 Ga0075363_100025907
314 Ga0075364_10032114
315 Ga0070712_100002601
316 Ga0075367_10274163
317 Ga0075428_100309067
318 Ga0075428_100334752
319 Ga0075428_100493238
320 Ga0075430_100035631
321 Ga0097620_100520078
322 Ga0075435_100615331
323 Ga0111539_10011175
324 Ga0105245_10350511
325 Ga0114129_10044415
326 Ga0105238_10000299
327 Ga0105246_10265629
328 Ga0157374_10002177
329 Ga0163163_10334352
330 Ga0157377_10218220
331 Ga0207645_10252985
332 Ga0207643_10149567
333 Ga0207684_10312997
334 Ga0207694_10000035
335 Ga0207650_10234965
336 Ga0207659_10736617
337 Ga0207706_10075689
338 Ga0207661_10003394
339 Ga0207661_10007802
340 Ga0207661_10065590
341 Ga0207661_10090488
342 Ga0207661_10581977
343 Ga0207679_10159926
344 Ga0207668_10083908
345 Ga0207703_10285158
346 Ga0207678_10153719
347 Ga0207648_10000230
348 Ga0207676_10000038
349 Ga0207674_10185849
350 Ga0268264_10116956
351 Ga0307408_100071808
352 Ga0307410_10056370
353 Ga0307406_10008461
354 Ga0307406_10018392
355 Ga0307409_100039256
356 Ga0307416_100002007
357 Ga0307416_101277454
358 Ga0307411_10298589
359 Ga0307415_100036342
360 Ga0373937_0029395
361 Ga0395900_0024844
362 Ga0395900_0032857
363 Ga0395900_0159843
364 Ga0395900_0316151
365 Ga0395898_0006139
366 Ga0395898_0030818
367 Ga0395898_0097620
368 Ga0395898_0229115
369 Ga0395905_0002878
370 Ga0395905_0635513
371 Ga0395901_0010325
372 Ga0395901_0020138
373 Ga0395901_0075114
374 Ga0395901_0101995
375 Ga0436365_0803019
376 Ga0439439_0047241
377 Ga0450915_000815
378 Ga0466966_0026470
379 Ga0466963_0212141
380 Ga0466960_0006162
381 Ga0466967_0007205
382 Ga0466967_0827781
383 Ga0495641_0000001
384 Ga0495608_0041941
385 Ga0495620_0001840
386 Ga0495644_0104257
387 Ga0495598_0000668
388 Ga0495656_0206492
389 Ga0495625_0000117
390 Ga0495600_0023618
391 Ga0495604_0050587
392 Ga0496101_0064462
393 Ga0496102_0184055
394 Ga0496104_0367927
395 Ga0496105_0141530
396 Ga0496106_0042468
397 Ga0496106_0263087
398 Ga0496107_0017770
399 Ga0496107_0098480
400 Ga0496108_0000002
401 Ga0496108_0024555
402 Ga0496109_0000001
403 Ga0496109_0039028
404 Ga0496110_0001097
405 Ga0496110_0018646
406 Ga0496112_0000003
407 Ga0496113_0067331
408 Ga0496113_0146468
409 Ga0496113_0412986
410 Ga0501031_0000862
411 Ga0501031_0011782
412 Ga0501032_0007468
413 Ga0501032_0294866
414 Ga0501033_0011766
415 Ga0501033_0015929
416 Ga0501033_0493109
417 Ga0501034_0001758
418 Ga0501034_0047504
419 Ga0501034_0057428
420 Ga0501034_0294198
421 Ga0501036_0015829
422 Ga0501036_0021818
423 Ga0501036_0055552
424 Ga0501037_0018931
425 Ga0501037_0124497
426 Ga0501037_0393310
427 Ga0501038_0003483
428 Ga0501038_0041921
429 Ga0501039_0001535
430 Ga0501039_0006711
431 Ga0501039_0046681
432 Ga0501040_0004635
433 Ga0501040_0037590
434 Ga0501040_0145544
435 Ga0501041_0001018
436 Ga0501041_0005035
437 Ga0501041_0114975
438 Ga0501042_0033019
439 Ga0501042_0082924
440 Ga0501043_0016570
441 Ga0501043_0030172
442 Ga0501046_0000511
443 Ga0501046_0278633
444 Ga0501047_0099092
445 Ga0501047_0147254
446 Ga0501048_0002924
447 Ga0501048_0015300
448 Ga0501048_0075178
449 Ga0501048_0080020
450 Ga0501067_0008717
451 Ga0501067_0055279
452 Ga0501068_0000191
453 Ga0501068_0000374
454 Ga0501068_0003646
455 Ga0501068_0106766
456 Ga0501068_0127250
457 Ga0501069_0000519
458 Ga0501069_0004049
459 Ga0501069_0023596
460 Ga0501069_0131801
461 Ga0501070_0005368
462 Ga0501070_0010412
463 Ga0501070_0017584
464 Ga0501071_0001280
465 Ga0501071_0003485
466 Ga0501071_0020078
467 Ga0501071_0033640
468 Ga0501072_0005626
469 Ga0501072_0015983
470 Ga0501072_0059605
471 Ga0501072_0068042
472 Ga0501073_0002589
473 Ga0501073_0004713
474 Ga0501073_0013296
475 Ga0501073_0203727
476 Ga0501074_0000174
477 Ga0501074_0032983
478 Ga0501074_0106368
479 Ga0501075_0004761
480 Ga0501075_0011159
481 Ga0501075_0028498
482 Ga0501076_0012041
483 Ga0501076_0016737
484 Ga0501077_0080719
485 Ga0501079_0016538
486 Ga0501079_0025702
487 Ga0501080_0001469
488 Ga0501080_0008503
489 Ga0501080_0014717
490 Ga0501080_0028321
491 Ga0501080_0037556
492 Ga0501080_0096612
493 Ga0501081_0235448
494 Ga0501083_0000140
495 Ga0501083_0000321
496 Ga0501083_0002589
497 Ga0501083_0044083
498 Ga0501083_0045249
499 Ga0501035_0006248
500 Ga0501035_0021234
501 Ga0501044_0037521
502 Ga0501044_0387124
503 Ga0501044_0432041
504 Ga0501044_0446264
505 Ga0501045_0003105
506 Ga0501045_0065940
507 Ga0501045_0222907
508 Ga0501045_0516388
509 nmdc:mga03683_36383_c2
510 nmdc:mga03n38_30218_c1
511 nmdc:mga00v17_41953_c1
512 nmdc:mga0yw44_186089_c1
513 nmdc:mga0yw44_23329_c1
514 nmdc:mga0yw44_99398_c1
515 nmdc:mga05p37_128104_c1
516 nmdc:mga05p37_58967_c1
517 nmdc:mga09592_118874_c1
518 nmdc:mga0qj67_136566_c1
519 nmdc:mga0qj67_150554_c1
520 nmdc:mga0qj67_39806_c1
521 nmdc:mga06r32_23356_c1
522 nmdc:mga08y16_202198_c1
523 nmdc:mga0n895_513478_c1
524 Ga0495601_0000096
525 Ga0495601_0000169
526 Ga0495595_0186565
527 Ga0500641_0001804
528 Ga0500614_000374
529 Ga0501084_0003538
530 Ga0501084_0005558
531 Ga0501084_0025213
532 Ga0501084_0376998
533 Ga0501082_0020037
534 Ga0501082_0025422
535 Ga0501082_0111761
536 Ga0501082_0374499
537 Ga0530510_0001020
538 Ga0530510_0029407

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06827

zf-FPG_IleRS

Zinc finger found in FPG and IleRS

245

276

0.95

PF06831

H2TH

Formamidopyrimidine-DNA glycosylase H2TH domain

148

240

0.88

PF01149

Fapy_DNA_glyco

Formamidopyrimidine-DNA glycosylase N-terminal domain

32

132

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fbu-assembly1.cif.gz_A crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (e2q) in complex with ap-site containing dna substrate 0.8846 3 250
2oq4-assembly1.cif.gz_A crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (e2q) in complex with ap-site containing dna substrate 0.8846 3 250
7n2u-assembly1.cif.gz_SM elongating 70s ribosome complex in a hybrid-h1 pre-translocation (pre-h1) conformation 0.882 148 199
2opf-assembly1.cif.gz_A crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (r252a) in complex with ap-site containing dna substrate 0.8817 3 250
1k3x-assembly1.cif.gz_A crystal structure of a trapped reaction intermediate of the dna repair enzyme endonuclease viii with brominated-dna 0.8731 3 250
ID Description Score Start End Superfamily
af_Q8TAT5_147_286_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9027 129 250 1.10.8.50
af_P9WNC3_146_285_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9006 129 250 1.10.8.50
af_D4ABX3_187_320_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8999 129 252 1.10.8.50
af_P9WNB9_128_268_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8903 128 250 1.10.8.50
3sarA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8893 126 250 1.10.8.50
ID Description Score Start End GO Terms
AF-A0A537YNR3-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9823 1 251 GO:0000703
GO:0003684
GO:0006284
GO:0008270
GO:0140078
AF-A0A1M3BNH2-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9816 1 250 GO:0000703
GO:0003684
GO:0006284
GO:0008270
GO:0140078
AF-A0A537YNR3-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9747 1 251 GO:0000703
GO:0003684
GO:0006284
GO:0008270
GO:0140078
AF-A0A2V8G169-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9731 49 209 GO:0000703
GO:0003684
GO:0006284
GO:0008270
GO:0016020
GO:0140078
AF-A0A1M3BNH2-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9701 1 250 GO:0000703
GO:0003684
GO:0006284
GO:0008270
GO:0140078

Map