F376265

General Info

Members Datasets Scaffolds Average Seq Length
269 172 538 264

Family's Representative Sequence

Representative Sequence 3300025961|Ga0207712_10279597|Ga0207712_102795972
Length 290
Sequence VSDWRTASAPAKLNLALVVGPMRADGKHEVATVLERLTLTDGVSVRLSEETRVTGFADDTLVQAALEQMTARADGSIRFEARIDKRIPIAAGLGGGSSDAAAALRLSNDLLDEPLAQDDLEAIAASLGADVPFFLRTGPQLGTGDGTTLADLALPRDYTVLLAVPNGASKSSTADVYAAFEARRGETGFAERRAHLFEALDGVRASKDLADLPPNDLAVSPLARELLGLGAFRADVTGAGPVAYGLFVDRDSAERARASLEVGSRRGHGALSSPDPERTGNRPASPGPRS

Samples

Sample ID Description Type Environment
1 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
111 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
112 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
113 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
114 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
115 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
125 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.86
Nodule 0
Rhizoplane 3.35
Rhizosphere 94.8
Stem 0
Stem Tuber 0
Unclassified 3.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207712_10279597 3300025961 Bacteria 1362
2 JGI25406J46586_10019238 3300003203 Bacteria 2788
3 JGI25407J50210_10011138 3300003373 Bacteria 2296
4 Ga0070658_10075402 3300005327 Bacteria 2766
5 Ga0070683_100077092 3300005329 Bacteria 3116
6 Ga0070683_100328759 3300005329 Bacteria 1455
7 Ga0070683_100432263 3300005329 Bacteria 1256
8 Ga0070690_100228066 3300005330 Bacteria 1308
9 Ga0068869_100040049 3300005334 Bacteria 3349
10 Ga0070682_100034149 3300005337 Bacteria 3095
11 Ga0070682_100107349 3300005337 Bacteria 1854
12 Ga0068868_100024356 3300005338 Bacteria 4592
13 Ga0070660_100005782 3300005339 Bacteria 8568
14 Ga0070660_100020585 3300005339 Bacteria 4850
15 Ga0070689_100227935 3300005340 Bacteria 1531
16 Ga0070691_10003653 3300005341 Bacteria 6945
17 Ga0070661_100006651 3300005344 Bacteria 7973
18 Ga0070692_10038738 3300005345 Bacteria 2431
19 Ga0070675_100018680 3300005354 Bacteria 5519
20 Ga0070675_100096276 3300005354 Bacteria 2486
21 Ga0070673_100002400 3300005364 Bacteria 11403
22 Ga0070659_100020224 3300005366 Bacteria 5054
23 Ga0070659_100058849 3300005366 Bacteria 3033
24 Ga0070714_100061008 3300005435 Bacteria 3238
25 Ga0070714_100176815 3300005435 Bacteria 1940
26 Ga0070700_100028807 3300005441 Bacteria 3307
27 Ga0070694_100289796 3300005444 Bacteria 1251
28 Ga0070663_100008182 3300005455 Bacteria 6418
29 Ga0070678_100021749 3300005456 Bacteria 4236
30 Ga0070662_100040524 3300005457 Bacteria 3317
31 Ga0068867_100023496 3300005459 Bacteria 4413
32 Ga0068867_100055858 3300005459 Bacteria 2920
33 Ga0070706_100301571 3300005467 Archaea 1495
34 Ga0070698_100135927 3300005471 Bacteria 2412
35 Ga0070699_100162257 3300005518 Unclassified 1978
36 Ga0070679_100037347 3300005530 Bacteria 4824
37 Ga0070679_100100318 3300005530 Bacteria 2882
38 Ga0070679_100199329 3300005530 Bacteria 1968
39 Ga0070684_100030622 3300005535 Bacteria 4573
40 Ga0070684_100045911 3300005535 Bacteria 3784
41 Ga0070684_100064239 3300005535 Bacteria 3219
42 Ga0070684_100078430 3300005535 Bacteria 2918
43 Ga0068853_100005153 3300005539 Bacteria 10213
44 Ga0070672_100004040 3300005543 Bacteria 9574
45 Ga0070686_100151702 3300005544 Bacteria 1624
46 Ga0070704_100303980 3300005549 Bacteria 1330
47 Ga0068855_100566743 3300005563 Unclassified 1228
48 Ga0070664_100044933 3300005564 Bacteria 3730
49 Ga0070664_100302496 3300005564 Bacteria 1446
50 Ga0068854_100003957 3300005578 Bacteria 9283
51 Ga0068856_100115727 3300005614 Bacteria 2681
52 Ga0068852_100010144 3300005616 Bacteria 7017
53 Ga0068866_10008932 3300005718 Bacteria 4242
54 Ga0068851_10005518 3300005834 Bacteria 5734
55 Ga0081455_10008393 3300005937 Bacteria 10744
56 Ga0081455_10114654 3300005937 Bacteria 2135
57 Ga0081455_10213496 3300005937 Bacteria 1436
58 Ga0081538_10008423 3300005981 Bacteria 8754
59 Ga0081540_1010651 3300005983 Bacteria 6203
60 Ga0081539_10000216 3300005985 Bacteria 134976
61 Ga0070717_10254549 3300006028 Bacteria 1552
62 Ga0075365_10035367 3300006038 Bacteria 3231
63 Ga0075365_10230558 3300006038 Bacteria 1300
64 Ga0075364_10105276 3300006051 Bacteria 1880
65 Ga0075432_10000201 3300006058 Bacteria 15689
66 Ga0075428_100000774 3300006844 Bacteria 33307
67 Ga0075428_100036861 3300006844 Bacteria 5385
68 Ga0075428_100495389 3300006844 Bacteria 1307
69 Ga0075434_100188640 3300006871 Bacteria 2082
70 Ga0075434_100275363 3300006871 Unclassified 1702
71 Ga0075429_100050830 3300006880 Bacteria 3607
72 Ga0068865_100028040 3300006881 Bacteria 3726
73 Ga0068865_100532897 3300006881 Bacteria 984
74 Ga0111539_10010606 3300009094 Bacteria 11602
75 Ga0111539_10028649 3300009094 Bacteria 6792
76 Ga0111539_10053960 3300009094 Bacteria 4784
77 Ga0111539_10313762 3300009094 Bacteria 1825
78 Ga0111539_10882257 3300009094 Bacteria 1040
79 Ga0105245_10005597 3300009098 Bacteria 11038
80 Ga0105245_10067975 3300009098 Bacteria 3228
81 Ga0105245_10196743 3300009098 Unclassified 1934
82 Ga0105245_10639645 3300009098 Bacteria 1093
83 Ga0114129_10060664 3300009147 Bacteria 5288
84 Ga0114129_10073344 3300009147 Bacteria 4768
85 Ga0114129_10194098 3300009147 Bacteria 2755
86 Ga0105243_10014536 3300009148 Bacteria 5956
87 Ga0105243_10097675 3300009148 Bacteria 2431
88 Ga0105243_10108724 3300009148 Bacteria 2315
89 Ga0105242_10006500 3300009176 Bacteria 9002
90 Ga0105242_10226934 3300009176 Bacteria 1672
91 Ga0105238_10018862 3300009551 Bacteria 7023
92 Ga0105238_10601721 3300009551 Unclassified 1107
93 Ga0105249_10193825 3300009553 Bacteria 1985
94 Ga0105239_10256458 3300010375 Bacteria 1965
95 Ga0105246_10070098 3300011119 Bacteria 2465
96 Ga0105246_10119965 3300011119 Bacteria 1947
97 Ga0157371_10003850 3300013102 Bacteria 13391
98 Ga0157374_10084643 3300013296 Bacteria 3014
99 Ga0157372_10140690 3300013307 Bacteria 2780
100 Ga0157375_10007284 3300013308 Bacteria 9684
101 Ga0157380_10347828 3300014326 Bacteria 1386
102 Ga0182008_10150079 3300014497 Bacteria 1169
103 Ga0157377_10024419 3300014745 Bacteria 3213
104 Ga0157377_10029917 3300014745 Bacteria 2946
105 Ga0157377_10058547 3300014745 Bacteria 2194
106 Ga0206353_11066925 3300020082 Bacteria 3406
107 Ga0207656_10034718 3300025321 Bacteria 2107
108 Ga0207642_10051385 3300025899 Bacteria 1865
109 Ga0207688_10006155 3300025901 Bacteria 6531
110 Ga0207688_10314855 3300025901 Bacteria 959
111 Ga0207705_10237705 3300025909 Bacteria 1387
112 Ga0207707_10026549 3300025912 Bacteria 5062
113 Ga0207660_10017336 3300025917 Bacteria 4783
114 Ga0207657_10004535 3300025919 Bacteria 14676
115 Ga0207657_10007941 3300025919 Bacteria 10821
116 Ga0207694_10395373 3300025924 Unclassified 1149
117 Ga0207650_10088567 3300025925 Bacteria 2361
118 Ga0207659_10116658 3300025926 Bacteria 2039
119 Ga0207687_10183256 3300025927 Bacteria 1624
120 Ga0207690_10076878 3300025932 Bacteria 2319
121 Ga0207690_10160831 3300025932 Bacteria 1674
122 Ga0207706_10006290 3300025933 Bacteria 11032
123 Ga0207706_10014991 3300025933 Bacteria 7018
124 Ga0207706_10168272 3300025933 Bacteria 1926
125 Ga0207686_10019265 3300025934 Bacteria 3878
126 Ga0207686_10280472 3300025934 Bacteria 1230
127 Ga0207709_10099025 3300025935 Bacteria 1923
128 Ga0207709_10264238 3300025935 Bacteria 1263
129 Ga0207669_10253124 3300025937 Bacteria 1313
130 Ga0207704_10006429 3300025938 Bacteria 5482
131 Ga0207691_10014318 3300025940 Bacteria 7562
132 Ga0207689_10036185 3300025942 Bacteria 4099
133 Ga0207661_10154091 3300025944 Bacteria 1989
134 Ga0207661_10190711 3300025944 Bacteria 1797
135 Ga0207661_10268213 3300025944 Bacteria 1523
136 Ga0207679_10558972 3300025945 Bacteria 1027
137 Ga0207667_10506518 3300025949 Bacteria 1224
138 Ga0207668_10221810 3300025972 Bacteria 1519
139 Ga0207668_10243727 3300025972 Bacteria 1456
140 Ga0207640_10072687 3300025981 Bacteria 2321
141 Ga0207708_10046917 3300026075 Bacteria 3290
142 Ga0207648_10068449 3300026089 Bacteria 3093
143 Ga0207674_10637354 3300026116 Bacteria 1029
144 Ga0207675_100075182 3300026118 Bacteria 3162
145 Ga0207683_10050346 3300026121 Bacteria 3648
146 Ga0207683_10142413 3300026121 Bacteria 2161
147 Ga0207698_10034706 3300026142 Bacteria 3680
148 Ga0207428_10000277 3300027907 Bacteria 69011
149 Ga0207428_10112381 3300027907 Bacteria 2095
150 Ga0268265_10511791 3300028380 Bacteria 1133
151 Ga0307416_100034444 3300032002 Bacteria 3854
152 Ga0307416_100349832 3300032002 Bacteria 1495
153 Ga0307415_100307824 3300032126 Bacteria 1315
154 Ga0373937_0165221 3300036401 Bacteria 2075
155 Ga0395899_0137175 3300037312 Bacteria 1743
156 Ga0395900_0017341 3300037418 Bacteria 7351
157 Ga0395900_0060044 3300037418 Bacteria 3914
158 Ga0395900_0076992 3300037418 Bacteria 3427
159 Ga0395900_0078570 3300037418 Bacteria 3390
160 Ga0395900_0180607 3300037418 Bacteria 2145
161 Ga0395900_0272645 3300037418 Bacteria 1686
162 Ga0395900_0277464 3300037418 Bacteria 1669
163 Ga0395900_0813853 3300037418 Bacteria 861
164 Ga0395898_0008599 3300037466 Bacteria 10774
165 Ga0395898_0045843 3300037466 Bacteria 4296
166 Ga0395898_0096173 3300037466 Bacteria 2845
167 Ga0395898_0256933 3300037466 Bacteria 1666
168 Ga0395905_0024795 3300037471 Bacteria 5660
169 Ga0395905_0164601 3300037471 Bacteria 2084
170 Ga0395905_0331371 3300037471 Bacteria 1413
171 Ga0395905_0386279 3300037471 Bacteria 1294
172 Ga0395905_0386775 3300037471 Bacteria 1293
173 Ga0395901_0027969 3300038443 Bacteria 5798
174 Ga0395901_0042023 3300038443 Bacteria 4738
175 Ga0395901_0100165 3300038443 Bacteria 3039
176 Ga0395901_0122155 3300038443 Bacteria 2737
177 Ga0395901_0216812 3300038443 Bacteria 2001
178 Ga0395901_0313863 3300038443 Bacteria 1623
179 Ga0395901_0851169 3300038443 Bacteria 897
180 Ga0395901_0869550 3300038443 Bacteria 885
181 Ga0450902_008518 3300042137 Bacteria 1603
182 Ga0450906_005527 3300042145 Bacteria 2593
183 Ga0439434_0076462 3300042435 Bacteria 1059
184 Ga0495653_0158797 3300046463 Bacteria 1572
185 Ga0495594_0210000 3300046499 Unclassified 1110
186 Ga0495596_0062738 3300046500 Bacteria 1446
187 Ga0495628_0207196 3300046516 Bacteria 1476
188 Ga0495630_0111197 3300046517 Unclassified 2075
189 Ga0495652_0139600 3300046529 Bacteria 1907
190 Ga0495640_0192334 3300046533 Bacteria 1296
191 Ga0495667_0030642 3300046559 Bacteria 3614
192 Ga0495656_0052812 3300046615 Bacteria 1744
193 Ga0495634_0136203 3300046642 Bacteria 1562
194 Ga0495635_0102771 3300046663 Unclassified 1953
195 Ga0495635_0271966 3300046663 Bacteria 1139
196 Ga0495659_0104772 3300046664 Bacteria 1099
197 Ga0495599_0133967 3300046678 Bacteria 1538
198 Ga0495670_0088184 3300046691 Bacteria 1586
199 Ga0495604_0049467 3300047317 Bacteria 3266
200 Ga0495674_0019709 3300047319 Bacteria 6256
201 Ga0495680_0152294 3300047322 Bacteria 1685
202 Ga0495679_049365 3300047446 Bacteria 1270
203 Ga0495684_0012289 3300047471 Bacteria 6604
204 Ga0495602_0047327 3300048088 Bacteria 3876
205 Ga0495602_0275897 3300048088 Bacteria 1241
206 Ga0496102_0018076 3300048905 Bacteria 6189
207 Ga0496104_0160088 3300048907 Bacteria 2159
208 Ga0496105_0075908 3300048908 Bacteria 2775
209 Ga0496107_0285124 3300048910 Bacteria 1229
210 Ga0496108_0075291 3300048911 Bacteria 2852
211 Ga0496110_0007648 3300048913 Bacteria 8647
212 Ga0496110_0133049 3300048913 Bacteria 2246
213 Ga0496110_0332729 3300048913 Bacteria 1384
214 Ga0496111_0014602 3300048914 Bacteria 5371
215 Ga0501031_0331499 3300049568 Bacteria 985
216 Ga0501033_0218062 3300049570 Bacteria 1359
217 Ga0501039_0064018 3300049575 Bacteria 2849
218 Ga0501039_0122198 3300049575 Bacteria 2041
219 Ga0501040_0188835 3300049576 Bacteria 1462
220 Ga0501040_0369968 3300049576 Bacteria 1028
221 Ga0501041_0072133 3300049577 Bacteria 2121
222 Ga0501042_0013784 3300049578 Bacteria 5507
223 Ga0501042_0040698 3300049578 Bacteria 3303
224 Ga0501046_0021998 3300049580 Bacteria 5256
225 Ga0501046_0498853 3300049580 Bacteria 872
226 Ga0501048_0034205 3300049582 Bacteria 3669
227 Ga0501068_0046945 3300049584 Bacteria 2604
228 Ga0501069_0048207 3300049585 Bacteria 2365
229 Ga0501071_0004216 3300049587 Bacteria 9103
230 Ga0501071_0026524 3300049587 Bacteria 4068
231 Ga0501071_0223047 3300049587 Bacteria 1419
232 Ga0501071_0247398 3300049587 Bacteria 1345
233 Ga0501072_0013077 3300049588 Bacteria 6352
234 Ga0501074_0015062 3300049590 Bacteria 5626
235 Ga0501074_0036486 3300049590 Bacteria 3561
236 Ga0501075_0088800 3300049591 Bacteria 2344
237 Ga0501075_0124441 3300049591 Bacteria 1963
238 Ga0501076_0021878 3300049592 Bacteria 4910
239 Ga0501076_0036935 3300049592 Bacteria 3829
240 Ga0501076_0084736 3300049592 Bacteria 2546
241 Ga0501077_0033787 3300049593 Bacteria 3256
242 Ga0501079_0021800 3300049741 Bacteria 4904
243 Ga0501079_0042949 3300049741 Bacteria 3490
244 Ga0501079_0526297 3300049741 Bacteria 929
245 Ga0501080_0044765 3300049742 Bacteria 4119
246 Ga0501081_0009270 3300049743 Bacteria 6410
247 Ga0501081_0028817 3300049743 Bacteria 3749
248 Ga0501081_0051380 3300049743 Bacteria 2843
249 Ga0501035_0401299 3300049822 Bacteria 1141
250 nmdc:mga00v17_29499_c1 3300050491 Bacteria 3220
251 nmdc:mga0yw44_24240_c1 3300050492 Bacteria 3431
252 nmdc:mga05p37_6440_c2 3300050507 Bacteria 7334
253 nmdc:mga09592_48366_c1 3300050508 Bacteria 3585
254 nmdc:mga09592_57348_c1 3300050508 Bacteria 3291
255 nmdc:mga08y16_194733_c1 3300050511 Bacteria 2101
256 nmdc:mga08y16_218044_c1 3300050511 Bacteria 1976
257 nmdc:mga08y16_33926_c1 3300050511 Bacteria 5362
258 nmdc:mga0n895_195724_c1 3300050512 Bacteria 2052
259 nmdc:mga0rr50_39164_c1 3300050513 Bacteria 3436
260 nmdc:mga0a205_63406_c1 3300050515 Bacteria 3570
261 Ga0495601_0044184 3300053077 Bacteria 2800
262 Ga0495595_0052799 3300053084 Bacteria 1887
263 Ga0495619_0075496 3300053085 Bacteria 2262
264 Ga0495619_0141471 3300053085 Bacteria 1657
265 Ga0501084_0168835 3300054114 Bacteria 1847
266 Ga0501082_0024615 3300060353 Bacteria 5189
267 Ga0501082_0052627 3300060353 Bacteria 3509
268 Ga0501082_0144744 3300060353 Bacteria 2063
269 Ga0501082_0145137 3300060353 Bacteria 2060
270 Ga0207712_10279597
271 JGI25406J46586_10019238
272 JGI25407J50210_10011138
273 Ga0070658_10075402
274 Ga0070683_100077092
275 Ga0070683_100328759
276 Ga0070683_100432263
277 Ga0070690_100228066
278 Ga0068869_100040049
279 Ga0070682_100034149
280 Ga0070682_100107349
281 Ga0068868_100024356
282 Ga0070660_100005782
283 Ga0070660_100020585
284 Ga0070689_100227935
285 Ga0070691_10003653
286 Ga0070661_100006651
287 Ga0070692_10038738
288 Ga0070675_100018680
289 Ga0070675_100096276
290 Ga0070673_100002400
291 Ga0070659_100020224
292 Ga0070659_100058849
293 Ga0070714_100061008
294 Ga0070714_100176815
295 Ga0070700_100028807
296 Ga0070694_100289796
297 Ga0070663_100008182
298 Ga0070678_100021749
299 Ga0070662_100040524
300 Ga0068867_100023496
301 Ga0068867_100055858
302 Ga0070706_100301571
303 Ga0070698_100135927
304 Ga0070699_100162257
305 Ga0070679_100037347
306 Ga0070679_100100318
307 Ga0070679_100199329
308 Ga0070684_100030622
309 Ga0070684_100045911
310 Ga0070684_100064239
311 Ga0070684_100078430
312 Ga0068853_100005153
313 Ga0070672_100004040
314 Ga0070686_100151702
315 Ga0070704_100303980
316 Ga0068855_100566743
317 Ga0070664_100044933
318 Ga0070664_100302496
319 Ga0068854_100003957
320 Ga0068856_100115727
321 Ga0068852_100010144
322 Ga0068866_10008932
323 Ga0068851_10005518
324 Ga0081455_10008393
325 Ga0081455_10114654
326 Ga0081455_10213496
327 Ga0081538_10008423
328 Ga0081540_1010651
329 Ga0081539_10000216
330 Ga0070717_10254549
331 Ga0075365_10035367
332 Ga0075365_10230558
333 Ga0075364_10105276
334 Ga0075432_10000201
335 Ga0075428_100000774
336 Ga0075428_100036861
337 Ga0075428_100495389
338 Ga0075434_100188640
339 Ga0075434_100275363
340 Ga0075429_100050830
341 Ga0068865_100028040
342 Ga0068865_100532897
343 Ga0111539_10010606
344 Ga0111539_10028649
345 Ga0111539_10053960
346 Ga0111539_10313762
347 Ga0111539_10882257
348 Ga0105245_10005597
349 Ga0105245_10067975
350 Ga0105245_10196743
351 Ga0105245_10639645
352 Ga0114129_10060664
353 Ga0114129_10073344
354 Ga0114129_10194098
355 Ga0105243_10014536
356 Ga0105243_10097675
357 Ga0105243_10108724
358 Ga0105242_10006500
359 Ga0105242_10226934
360 Ga0105238_10018862
361 Ga0105238_10601721
362 Ga0105249_10193825
363 Ga0105239_10256458
364 Ga0105246_10070098
365 Ga0105246_10119965
366 Ga0157371_10003850
367 Ga0157374_10084643
368 Ga0157372_10140690
369 Ga0157375_10007284
370 Ga0157380_10347828
371 Ga0182008_10150079
372 Ga0157377_10024419
373 Ga0157377_10029917
374 Ga0157377_10058547
375 Ga0206353_11066925
376 Ga0207656_10034718
377 Ga0207642_10051385
378 Ga0207688_10006155
379 Ga0207688_10314855
380 Ga0207705_10237705
381 Ga0207707_10026549
382 Ga0207660_10017336
383 Ga0207657_10004535
384 Ga0207657_10007941
385 Ga0207694_10395373
386 Ga0207650_10088567
387 Ga0207659_10116658
388 Ga0207687_10183256
389 Ga0207690_10076878
390 Ga0207690_10160831
391 Ga0207706_10006290
392 Ga0207706_10014991
393 Ga0207706_10168272
394 Ga0207686_10019265
395 Ga0207686_10280472
396 Ga0207709_10099025
397 Ga0207709_10264238
398 Ga0207669_10253124
399 Ga0207704_10006429
400 Ga0207691_10014318
401 Ga0207689_10036185
402 Ga0207661_10154091
403 Ga0207661_10190711
404 Ga0207661_10268213
405 Ga0207679_10558972
406 Ga0207667_10506518
407 Ga0207668_10221810
408 Ga0207668_10243727
409 Ga0207640_10072687
410 Ga0207708_10046917
411 Ga0207648_10068449
412 Ga0207674_10637354
413 Ga0207675_100075182
414 Ga0207683_10050346
415 Ga0207683_10142413
416 Ga0207698_10034706
417 Ga0207428_10000277
418 Ga0207428_10112381
419 Ga0268265_10511791
420 Ga0307416_100034444
421 Ga0307416_100349832
422 Ga0307415_100307824
423 Ga0373937_0165221
424 Ga0395899_0137175
425 Ga0395900_0017341
426 Ga0395900_0060044
427 Ga0395900_0076992
428 Ga0395900_0078570
429 Ga0395900_0180607
430 Ga0395900_0272645
431 Ga0395900_0277464
432 Ga0395900_0813853
433 Ga0395898_0008599
434 Ga0395898_0045843
435 Ga0395898_0096173
436 Ga0395898_0256933
437 Ga0395905_0024795
438 Ga0395905_0164601
439 Ga0395905_0331371
440 Ga0395905_0386279
441 Ga0395905_0386775
442 Ga0395901_0027969
443 Ga0395901_0042023
444 Ga0395901_0100165
445 Ga0395901_0122155
446 Ga0395901_0216812
447 Ga0395901_0313863
448 Ga0395901_0851169
449 Ga0395901_0869550
450 Ga0450902_008518
451 Ga0450906_005527
452 Ga0439434_0076462
453 Ga0495653_0158797
454 Ga0495594_0210000
455 Ga0495596_0062738
456 Ga0495628_0207196
457 Ga0495630_0111197
458 Ga0495652_0139600
459 Ga0495640_0192334
460 Ga0495667_0030642
461 Ga0495656_0052812
462 Ga0495634_0136203
463 Ga0495635_0102771
464 Ga0495635_0271966
465 Ga0495659_0104772
466 Ga0495599_0133967
467 Ga0495670_0088184
468 Ga0495604_0049467
469 Ga0495674_0019709
470 Ga0495680_0152294
471 Ga0495679_049365
472 Ga0495684_0012289
473 Ga0495602_0047327
474 Ga0495602_0275897
475 Ga0496102_0018076
476 Ga0496104_0160088
477 Ga0496105_0075908
478 Ga0496107_0285124
479 Ga0496108_0075291
480 Ga0496110_0007648
481 Ga0496110_0133049
482 Ga0496110_0332729
483 Ga0496111_0014602
484 Ga0501031_0331499
485 Ga0501033_0218062
486 Ga0501039_0064018
487 Ga0501039_0122198
488 Ga0501040_0188835
489 Ga0501040_0369968
490 Ga0501041_0072133
491 Ga0501042_0013784
492 Ga0501042_0040698
493 Ga0501046_0021998
494 Ga0501046_0498853
495 Ga0501048_0034205
496 Ga0501068_0046945
497 Ga0501069_0048207
498 Ga0501071_0004216
499 Ga0501071_0026524
500 Ga0501071_0223047
501 Ga0501071_0247398
502 Ga0501072_0013077
503 Ga0501074_0015062
504 Ga0501074_0036486
505 Ga0501075_0088800
506 Ga0501075_0124441
507 Ga0501076_0021878
508 Ga0501076_0036935
509 Ga0501076_0084736
510 Ga0501077_0033787
511 Ga0501079_0021800
512 Ga0501079_0042949
513 Ga0501079_0526297
514 Ga0501080_0044765
515 Ga0501081_0009270
516 Ga0501081_0028817
517 Ga0501081_0051380
518 Ga0501035_0401299
519 nmdc:mga00v17_29499_c1
520 nmdc:mga0yw44_24240_c1
521 nmdc:mga05p37_6440_c2
522 nmdc:mga09592_48366_c1
523 nmdc:mga09592_57348_c1
524 nmdc:mga08y16_194733_c1
525 nmdc:mga08y16_218044_c1
526 nmdc:mga08y16_33926_c1
527 nmdc:mga0n895_195724_c1
528 nmdc:mga0rr50_39164_c1
529 nmdc:mga0a205_63406_c1
530 Ga0495601_0044184
531 Ga0495595_0052799
532 Ga0495619_0075496
533 Ga0495619_0141471
534 Ga0501084_0168835
535 Ga0501082_0024615
536 Ga0501082_0052627
537 Ga0501082_0144744
538 Ga0501082_0145137

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

60

138

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4emd-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 0.7945 3 248
4emd-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 0.7799 3 248
3pyf-assembly1.cif.gz_A mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with amp-pnp 0.7638 6 248
4ed4-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to atp 0.7634 1 248
4ed4-assembly1.cif.gz_A crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to atp 0.755 1 248
ID Description Score Start End Superfamily
4dxlA01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8743 1 140 3.30.230.10
af_Q8S2G0_72_245_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8675 3 140 3.30.230.10
2v2qB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8672 2 140 3.30.230.10
af_Q2G0S8_1_157_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8618 6 139 3.30.230.10
1oj4B01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.8015 5 140 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A7W0UM04-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9412 7 250 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A538M8D4-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9289 4 250 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A7V9CTF8-F1-model_v4 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 0.9227 5 145 GO:0005524
GO:0050515
AF-A0A7W0UM04-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9156 7 250 GO:0005524
GO:0016114
GO:0019288
GO:0050515
AF-A0A538M8D4-F1-model_v4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) 0.9145 4 250 GO:0005524
GO:0016114
GO:0019288
GO:0050515

Map