F376136

General Info

Members Datasets Scaffolds Average Seq Length
269 179 538 568

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100043598|Ga0075431_1000435982
Length 640
Sequence LKDGKSKTSSARSETCTADLANLAPIPRRRISPIGWPKQGVYALCRPLAFCPLCSNYLAVDQHSLLSNIGLVFVIATAFAFLAKFFKQPLILAYLVAGVVIGPEIGFAWIQDEQTIELISEIGLILLLFIIGLEIDLKKLLSAGRTVLVTGIAQFLLCVGLGIGLALLMGFTPARGNFDWLYLAITLALSSTLIVVKLLYDKFELTTLPGRITLGVLVCQDIWAIVFLALQPNLHEPHLGTLLESFVKGAGLVLMTLALGRYVLPRFFSFAAKVPELMLIAALAWCFLVSGAADWLGLSREMGALVAGVSMSTFPYNIDVIAKVINIRDFFVTLFFVALGMKIPQPTITIVTAAIGMSLFVLASRLLTIFPVLYWLGNGVRASLIPAINLAQMSEFSLVITSLGLALNHISSELVATLTFVFAITSTLSTYLIAYNHEIQRRLAPLLSKVGFTSGTDNDDVTEAAEAKNSIVFLGCFREASSILHELESYAKEMKDDGILAQILVIDFNPQVLQELKRRGIKCLYGDVAHMDTLHHAHIHSARIVACTISDNILRGTTNLRLLLQARRLCPHARVITAADGISSAIDLYEQNADFVYIARLHSASYMAELITRAVRDSDGFKIYREEELRLLKQRVEVLQ

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
6 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
128 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
129 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
130 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
131 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
132 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
174 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
175 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
176 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
177 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
178 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
179 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.14
Metatranscriptomes 0
Isolates 1.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.23
Nodule 0.74
Rhizoplane 5.2
Rhizosphere 90.71
Stem 0
Stem Tuber 0
Unclassified 3.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100043598 3300006847 Bacteria 4627
2 JGI24752J21851_1001377 3300001976 Bacteria 3283
3 JGI24743J22301_10006587 3300001991 Bacteria 1986
4 JGI25160J50197_1000577 3300003354 Bacteria 20605
5 JGI25404J52841_10000248 3300003659 Bacteria 6766
6 JGI25405J52794_10001535 3300003911 Unclassified 3822
7 Ga0070658_10016270 3300005327 Bacteria 5952
8 Ga0070658_10017045 3300005327 Bacteria 5813
9 Ga0070658_10147193 3300005327 Bacteria 1970
10 Ga0070676_10035359 3300005328 Bacteria 2873
11 Ga0070683_100009523 3300005329 Bacteria 8314
12 Ga0070670_100036657 3300005331 Bacteria 4220
13 Ga0070680_100048255 3300005336 Bacteria 3469
14 Ga0070680_100058273 3300005336 Bacteria 3159
15 Ga0070680_100065101 3300005336 Bacteria 2987
16 Ga0070680_100092231 3300005336 Bacteria 2508
17 Ga0070660_100072126 3300005339 Bacteria 2698
18 Ga0070689_100005820 3300005340 Bacteria 8462
19 Ga0070689_100016342 3300005340 Bacteria 5431
20 Ga0070687_100010016 3300005343 Bacteria 4080
21 Ga0070661_100033306 3300005344 Bacteria 3731
22 Ga0070692_10015834 3300005345 Bacteria 3575
23 Ga0070674_100019678 3300005356 Bacteria 4293
24 Ga0070673_100122472 3300005364 Bacteria 2172
25 Ga0070659_100007972 3300005366 Bacteria 7719
26 Ga0070659_100020663 3300005366 Bacteria 5005
27 Ga0070659_100040806 3300005366 Bacteria 3627
28 Ga0070659_100045771 3300005366 Bacteria 3428
29 Ga0070667_100034398 3300005367 Bacteria 4239
30 Ga0070714_100058167 3300005435 Bacteria 3311
31 Ga0070701_10067862 3300005438 Bacteria 1898
32 Ga0070711_100120596 3300005439 Bacteria 1939
33 Ga0070708_100000003 3300005445 Bacteria 189594
34 Ga0070708_100003318 3300005445 Bacteria 12585
35 Ga0070708_100005607 3300005445 Bacteria 9953
36 Ga0070681_10007953 3300005458 Bacteria 10380
37 Ga0070681_10082240 3300005458 Bacteria 3175
38 Ga0070685_10000952 3300005466 Bacteria 15547
39 Ga0070685_10007199 3300005466 Bacteria 5687
40 Ga0070706_100000103 3300005467 Bacteria 103908
41 Ga0070706_100000230 3300005467 Bacteria 68414
42 Ga0070706_100000686 3300005467 Bacteria 38326
43 Ga0070706_100038294 3300005467 Unclassified 4426
44 Ga0070706_100068910 3300005467 Bacteria 3272
45 Ga0070707_100000022 3300005468 Bacteria 129949
46 Ga0070707_100007811 3300005468 Bacteria 9934
47 Ga0070707_100011694 3300005468 Bacteria 8190
48 Ga0070707_100015485 3300005468 Bacteria 7156
49 Ga0070698_100048327 3300005471 Unclassified 4347
50 Ga0070698_100124700 3300005471 Bacteria 2533
51 Ga0070699_100000189 3300005518 Bacteria 59908
52 Ga0070699_100000412 3300005518 Bacteria 41231
53 Ga0070699_100055380 3300005518 Bacteria 3434
54 Ga0070679_100011540 3300005530 Bacteria 8422
55 Ga0070679_100074930 3300005530 Bacteria 3374
56 Ga0070684_100035753 3300005535 Bacteria 4253
57 Ga0070684_100098719 3300005535 Bacteria 2605
58 Ga0070697_100002105 3300005536 Bacteria 15245
59 Ga0070697_100004645 3300005536 Bacteria 10536
60 Ga0070697_100009959 3300005536 Bacteria 7417
61 Ga0068853_100020679 3300005539 Bacteria 5474
62 Ga0070695_100014709 3300005545 Bacteria 4719
63 Ga0068855_100097451 3300005563 Bacteria 3387
64 Ga0070664_100028519 3300005564 Bacteria 4644
65 Ga0068857_100017460 3300005577 Bacteria 6289
66 Ga0068854_100012043 3300005578 Bacteria 5653
67 Ga0068854_100013913 3300005578 Bacteria 5293
68 Ga0068854_100080257 3300005578 Bacteria 2407
69 Ga0070702_100016571 3300005615 Bacteria 3783
70 Ga0068852_100008461 3300005616 Bacteria 7584
71 Ga0068852_100011273 3300005616 Bacteria 6721
72 Ga0068852_100046652 3300005616 Bacteria 3693
73 Ga0068859_100094270 3300005617 Bacteria 3046
74 Ga0068859_100097211 3300005617 Bacteria 2998
75 Ga0068864_100006518 3300005618 Bacteria 9565
76 Ga0068864_100008277 3300005618 Bacteria 8578
77 Ga0068858_100028124 3300005842 Bacteria 5224
78 Ga0068860_100034492 3300005843 Bacteria 4854
79 Ga0068862_100069099 3300005844 Bacteria 3048
80 Ga0081455_10009135 3300005937 Bacteria 10227
81 Ga0081455_10059400 3300005937 Bacteria 3229
82 Ga0081538_10012944 3300005981 Bacteria 6644
83 Ga0081538_10018192 3300005981 Bacteria 5292
84 Ga0081538_10024211 3300005981 Unclassified 4331
85 Ga0081538_10033272 3300005981 Bacteria 3435
86 Ga0081538_10036444 3300005981 Unclassified 3209
87 Ga0081540_1000474 3300005983 Bacteria 39520
88 Ga0070717_10000009 3300006028 Bacteria 297183
89 Ga0070715_10021792 3300006163 Bacteria 2490
90 Ga0075366_10016137 3300006195 Bacteria 4288
91 Ga0075428_100021435 3300006844 Bacteria 7152
92 Ga0075430_100002635 3300006846 Bacteria 14980
93 Ga0075430_100058619 3300006846 Bacteria 3237
94 Ga0075431_100013644 3300006847 Bacteria 8211
95 Ga0075433_10031371 3300006852 Bacteria 4542
96 Ga0075433_10062682 3300006852 Bacteria 3256
97 Ga0075434_100048082 3300006871 Bacteria 4233
98 Ga0075429_100020204 3300006880 Bacteria 5775
99 Ga0075429_100091283 3300006880 Bacteria 2657
100 Ga0075436_100000326 3300006914 Bacteria 30476
101 Ga0075436_100022507 3300006914 Bacteria 4328
102 Ga0075436_100029181 3300006914 Bacteria 3794
103 Ga0075436_100043226 3300006914 Bacteria 3106
104 Ga0097620_100094271 3300006931 Bacteria 3046
105 Ga0097620_100097207 3300006931 Bacteria 2998
106 Ga0099794_10000436 3300007265 Bacteria 13891
107 Ga0105240_10110140 3300009093 Bacteria 3333
108 Ga0105240_10137802 3300009093 Bacteria 2921
109 Ga0111539_10016682 3300009094 Bacteria 9102
110 Ga0111539_10018938 3300009094 Bacteria 8514
111 Ga0111539_10168182 3300009094 Bacteria 2562
112 Ga0105245_10001527 3300009098 Bacteria 20967
113 Ga0105245_10100617 3300009098 Bacteria 2674
114 Ga0114129_10080053 3300009147 Bacteria 4542
115 Ga0114129_10091940 3300009147 Bacteria 4203
116 Ga0114129_10272472 3300009147 Bacteria 2264
117 Ga0105241_10028853 3300009174 Bacteria 4134
118 Ga0105242_10048135 3300009176 Bacteria 3464
119 Ga0105248_10094549 3300009177 Bacteria 3365
120 Ga0105237_10060796 3300009545 Bacteria 3778
121 Ga0105238_10034319 3300009551 Bacteria 5162
122 Ga0105249_10012299 3300009553 Bacteria 7542
123 Ga0157373_10006263 3300013100 Bacteria 8891
124 Ga0157371_10041576 3300013102 Bacteria 3279
125 Ga0157370_10015092 3300013104 Bacteria 7871
126 Ga0157370_10070825 3300013104 Bacteria 3291
127 Ga0157369_10005445 3300013105 Bacteria 14806
128 Ga0157369_10018504 3300013105 Bacteria 7810
129 Ga0157369_10064170 3300013105 Bacteria 3955
130 Ga0157369_10115270 3300013105 Bacteria 2854
131 Ga0157378_10079219 3300013297 Bacteria 2965
132 Ga0163162_10063510 3300013306 Bacteria 3736
133 Ga0157372_10112507 3300013307 Bacteria 3119
134 Ga0157372_10256258 3300013307 Bacteria 2031
135 Ga0163163_10012961 3300014325 Bacteria 7616
136 Ga0163163_10083865 3300014325 Bacteria 3192
137 Ga0157380_10050275 3300014326 Bacteria 3292
138 Ga0157380_10097563 3300014326 Bacteria 2439
139 Ga0157377_10003233 3300014745 Bacteria 7355
140 Ga0209233_1007402 3300025261 Bacteria 3481
141 Ga0207697_10000139 3300025315 Bacteria 34991
142 Ga0207656_10004343 3300025321 Bacteria 4945
143 Ga0207656_10005194 3300025321 Bacteria 4580
144 Ga0207682_10000054 3300025893 Bacteria 48876
145 Ga0207688_10000567 3300025901 Bacteria 18129
146 Ga0207647_10081045 3300025904 Bacteria 1945
147 Ga0207645_10000917 3300025907 Bacteria 24498
148 Ga0207645_10017974 3300025907 Bacteria 4663
149 Ga0207643_10000618 3300025908 Bacteria 22431
150 Ga0207684_10000001 3300025910 Bacteria 1115726
151 Ga0207684_10000039 3300025910 Bacteria 274342
152 Ga0207684_10000140 3300025910 Bacteria 130214
153 Ga0207684_10008828 3300025910 Bacteria 8948
154 Ga0207684_10042266 3300025910 Unclassified 3864
155 Ga0207654_10072780 3300025911 Bacteria 2047
156 Ga0207707_10006076 3300025912 Bacteria 10569
157 Ga0207707_10015006 3300025912 Bacteria 6746
158 Ga0207707_10052006 3300025912 Bacteria 3567
159 Ga0207695_10121470 3300025913 Bacteria 2579
160 Ga0207693_10030120 3300025915 Bacteria 4285
161 Ga0207660_10018907 3300025917 Bacteria 4601
162 Ga0207660_10044958 3300025917 Bacteria 3109
163 Ga0207660_10061347 3300025917 Bacteria 2706
164 Ga0207662_10000472 3300025918 Bacteria 17955
165 Ga0207657_10000191 3300025919 Bacteria 63991
166 Ga0207657_10008154 3300025919 Bacteria 10676
167 Ga0207657_10028763 3300025919 Bacteria 5065
168 Ga0207649_10034507 3300025920 Bacteria 3032
169 Ga0207652_10024423 3300025921 Bacteria 5014
170 Ga0207646_10000038 3300025922 Bacteria 191168
171 Ga0207646_10000599 3300025922 Bacteria 46928
172 Ga0207646_10003411 3300025922 Bacteria 17943
173 Ga0207646_10004217 3300025922 Bacteria 15733
174 Ga0207646_10015027 3300025922 Bacteria 7327
175 Ga0207646_10040843 3300025922 Bacteria 4171
176 Ga0207650_10001048 3300025925 Bacteria 20536
177 Ga0207650_10038798 3300025925 Bacteria 3481
178 Ga0207687_10018991 3300025927 Bacteria 4548
179 Ga0207644_10058296 3300025931 Bacteria 2791
180 Ga0207706_10002581 3300025933 Bacteria 17646
181 Ga0207669_10019689 3300025937 Bacteria 3521
182 Ga0207691_10003295 3300025940 Bacteria 15737
183 Ga0207711_10040531 3300025941 Bacteria 3962
184 Ga0207711_10079256 3300025941 Bacteria 2866
185 Ga0207689_10001696 3300025942 Bacteria 20923
186 Ga0207661_10002014 3300025944 Bacteria 14006
187 Ga0207661_10057616 3300025944 Bacteria 3124
188 Ga0207679_10009620 3300025945 Bacteria 6194
189 Ga0207667_10002467 3300025949 Bacteria 23098
190 Ga0207667_10098680 3300025949 Bacteria 3014
191 Ga0207640_10024712 3300025981 Bacteria 3629
192 Ga0207658_10129010 3300025986 Bacteria 2029
193 Ga0207703_10035371 3300026035 Bacteria 3969
194 Ga0207703_10047707 3300026035 Bacteria 3455
195 Ga0207639_10035739 3300026041 Bacteria 3678
196 Ga0207678_10003642 3300026067 Bacteria 13850
197 Ga0207678_10005218 3300026067 Bacteria 11644
198 Ga0207708_10001015 3300026075 Bacteria 20995
199 Ga0207676_10080800 3300026095 Bacteria 2639
200 Ga0207674_10000448 3300026116 Bacteria 53696
201 Ga0207674_10003532 3300026116 Bacteria 19088
202 Ga0207675_100009119 3300026118 Bacteria 9308
203 Ga0207698_10005135 3300026142 Bacteria 8046
204 Ga0209588_1000528 3300027671 Bacteria 9795
205 Ga0268266_10180474 3300028379 Bacteria 1921
206 Ga0268265_10028019 3300028380 Bacteria 4029
207 Ga0307405_10003874 3300031731 Bacteria 6976
208 Ga0307411_10098851 3300032005 Unclassified 2058
209 Ga0307415_100027454 3300032126 Unclassified 3607
210 Ga0373942_0002465 3300035207 Bacteria 4487
211 Ga0373961_0004105 3300035241 Bacteria 3543
212 Ga0373931_0008408 3300035691 Bacteria 4895
213 Ga0373947_0032111 3300035725 Bacteria 3093
214 Ga0316582_0072378 3300036647 Bacteria 2235
215 Ga0373925_0098518 3300037068 Bacteria 2244
216 Ga0395900_0065767 3300037418 Bacteria 3725
217 Ga0395898_0010869 3300037466 Bacteria 9504
218 Ga0395901_0017942 3300038443 Bacteria 7224
219 Ga0395901_0221411 3300038443 Bacteria 1978
220 Ga0439434_0003714 3300042435 Unclassified 4467
221 Ga0451577_0018174 3300042876 Bacteria 6479
222 Ga0466972_0008273 3300044658 Bacteria 5212
223 Ga0453684_0162647 3300044712 Bacteria 2638
224 Ga0495592_0016995 3300046454 Bacteria 5524
225 Ga0495580_0057472 3300046472 Bacteria 2738
226 Ga0495628_0108026 3300046516 Bacteria 2142
227 Ga0495587_0055974 3300046536 Bacteria 2321
228 Ga0495687_038993 3300047443 Bacteria 2105
229 Ga0496100_0078723 3300048903 Bacteria 2219
230 Ga0496101_0058711 3300048904 Bacteria 2787
231 Ga0496105_0114298 3300048908 Bacteria 2226
232 Ga0496106_0001371 3300048909 Bacteria 18274
233 Ga0496107_0025414 3300048910 Bacteria 4193
234 Ga0496108_0001086 3300048911 Bacteria 21216
235 Ga0496108_0047876 3300048911 Bacteria 3574
236 Ga0496109_0005086 3300048912 Bacteria 10983
237 Ga0496109_0057267 3300048912 Bacteria 3557
238 Ga0496110_0007806 3300048913 Bacteria 8574
239 Ga0496111_0061144 3300048914 Bacteria 2731
240 Ga0496112_0010879 3300048915 Bacteria 8280
241 Ga0496113_0029130 3300048916 Bacteria 3983
242 Ga0496114_0077500 3300048917 Bacteria 2802
243 Ga0501033_0126912 3300049570 Bacteria 1849
244 Ga0501046_0028485 3300049580 Bacteria 4547
245 Ga0501047_0101245 3300049581 Bacteria 2760
246 Ga0501068_0001693 3300049584 Bacteria 11752
247 Ga0501070_0073327 3300049586 Bacteria 2832
248 Ga0501074_0062843 3300049590 Bacteria 2674
249 Ga0501080_0076213 3300049742 Bacteria 3119
250 Ga0501083_0062606 3300049744 Bacteria 2482
251 Ga0501044_0000332 3300049823 Bacteria 59619
252 nmdc:mga0k408_6757_c1 3300050493 Bacteria 6119
253 nmdc:mga09592_105605_c1 3300050508 Bacteria 2415
254 nmdc:mga09592_20750_c1 3300050508 Bacteria 5407
255 nmdc:mga0qj67_21911_c1 3300050509 Bacteria 4903
256 nmdc:mga06r32_18233_c1 3300050510 Bacteria 6423
257 nmdc:mga08y16_27958_c1 3300050511 Bacteria 5946
258 nmdc:mga08x19_24344_c1 3300050514 Bacteria 3761
259 nmdc:mga08x19_41350_c1 3300050514 Bacteria 2936
260 nmdc:mga08x19_45774_c1 3300050514 Bacteria 2796
261 nmdc:mga08x19_82077_c1 3300050514 Bacteria 2118
262 Ga0495619_0031296 3300053085 Bacteria 3448
263 Ga0500652_000019 3300053131 Bacteria 120149
264 Ga0500601_000192 3300053737 Bacteria 12511
265 2513679680 2513237098 Bacteria 9902361
266 2874623754 2874620515 Bacteria 8290088
267 2885390599 2885383462 Bacteria 9473874
268 2903772046 2903768456 Bacteria 9749579
269 8056682320 8056681323 Bacteria 8472857
270 Ga0075431_100043598
271 JGI24752J21851_1001377
272 JGI24743J22301_10006587
273 JGI25160J50197_1000577
274 JGI25404J52841_10000248
275 JGI25405J52794_10001535
276 Ga0070658_10016270
277 Ga0070658_10017045
278 Ga0070658_10147193
279 Ga0070676_10035359
280 Ga0070683_100009523
281 Ga0070670_100036657
282 Ga0070680_100048255
283 Ga0070680_100058273
284 Ga0070680_100065101
285 Ga0070680_100092231
286 Ga0070660_100072126
287 Ga0070689_100005820
288 Ga0070689_100016342
289 Ga0070687_100010016
290 Ga0070661_100033306
291 Ga0070692_10015834
292 Ga0070674_100019678
293 Ga0070673_100122472
294 Ga0070659_100007972
295 Ga0070659_100020663
296 Ga0070659_100040806
297 Ga0070659_100045771
298 Ga0070667_100034398
299 Ga0070714_100058167
300 Ga0070701_10067862
301 Ga0070711_100120596
302 Ga0070708_100000003
303 Ga0070708_100003318
304 Ga0070708_100005607
305 Ga0070681_10007953
306 Ga0070681_10082240
307 Ga0070685_10000952
308 Ga0070685_10007199
309 Ga0070706_100000103
310 Ga0070706_100000230
311 Ga0070706_100000686
312 Ga0070706_100038294
313 Ga0070706_100068910
314 Ga0070707_100000022
315 Ga0070707_100007811
316 Ga0070707_100011694
317 Ga0070707_100015485
318 Ga0070698_100048327
319 Ga0070698_100124700
320 Ga0070699_100000189
321 Ga0070699_100000412
322 Ga0070699_100055380
323 Ga0070679_100011540
324 Ga0070679_100074930
325 Ga0070684_100035753
326 Ga0070684_100098719
327 Ga0070697_100002105
328 Ga0070697_100004645
329 Ga0070697_100009959
330 Ga0068853_100020679
331 Ga0070695_100014709
332 Ga0068855_100097451
333 Ga0070664_100028519
334 Ga0068857_100017460
335 Ga0068854_100012043
336 Ga0068854_100013913
337 Ga0068854_100080257
338 Ga0070702_100016571
339 Ga0068852_100008461
340 Ga0068852_100011273
341 Ga0068852_100046652
342 Ga0068859_100094270
343 Ga0068859_100097211
344 Ga0068864_100006518
345 Ga0068864_100008277
346 Ga0068858_100028124
347 Ga0068860_100034492
348 Ga0068862_100069099
349 Ga0081455_10009135
350 Ga0081455_10059400
351 Ga0081538_10012944
352 Ga0081538_10018192
353 Ga0081538_10024211
354 Ga0081538_10033272
355 Ga0081538_10036444
356 Ga0081540_1000474
357 Ga0070717_10000009
358 Ga0070715_10021792
359 Ga0075366_10016137
360 Ga0075428_100021435
361 Ga0075430_100002635
362 Ga0075430_100058619
363 Ga0075431_100013644
364 Ga0075433_10031371
365 Ga0075433_10062682
366 Ga0075434_100048082
367 Ga0075429_100020204
368 Ga0075429_100091283
369 Ga0075436_100000326
370 Ga0075436_100022507
371 Ga0075436_100029181
372 Ga0075436_100043226
373 Ga0097620_100094271
374 Ga0097620_100097207
375 Ga0099794_10000436
376 Ga0105240_10110140
377 Ga0105240_10137802
378 Ga0111539_10016682
379 Ga0111539_10018938
380 Ga0111539_10168182
381 Ga0105245_10001527
382 Ga0105245_10100617
383 Ga0114129_10080053
384 Ga0114129_10091940
385 Ga0114129_10272472
386 Ga0105241_10028853
387 Ga0105242_10048135
388 Ga0105248_10094549
389 Ga0105237_10060796
390 Ga0105238_10034319
391 Ga0105249_10012299
392 Ga0157373_10006263
393 Ga0157371_10041576
394 Ga0157370_10015092
395 Ga0157370_10070825
396 Ga0157369_10005445
397 Ga0157369_10018504
398 Ga0157369_10064170
399 Ga0157369_10115270
400 Ga0157378_10079219
401 Ga0163162_10063510
402 Ga0157372_10112507
403 Ga0157372_10256258
404 Ga0163163_10012961
405 Ga0163163_10083865
406 Ga0157380_10050275
407 Ga0157380_10097563
408 Ga0157377_10003233
409 Ga0209233_1007402
410 Ga0207697_10000139
411 Ga0207656_10004343
412 Ga0207656_10005194
413 Ga0207682_10000054
414 Ga0207688_10000567
415 Ga0207647_10081045
416 Ga0207645_10000917
417 Ga0207645_10017974
418 Ga0207643_10000618
419 Ga0207684_10000001
420 Ga0207684_10000039
421 Ga0207684_10000140
422 Ga0207684_10008828
423 Ga0207684_10042266
424 Ga0207654_10072780
425 Ga0207707_10006076
426 Ga0207707_10015006
427 Ga0207707_10052006
428 Ga0207695_10121470
429 Ga0207693_10030120
430 Ga0207660_10018907
431 Ga0207660_10044958
432 Ga0207660_10061347
433 Ga0207662_10000472
434 Ga0207657_10000191
435 Ga0207657_10008154
436 Ga0207657_10028763
437 Ga0207649_10034507
438 Ga0207652_10024423
439 Ga0207646_10000038
440 Ga0207646_10000599
441 Ga0207646_10003411
442 Ga0207646_10004217
443 Ga0207646_10015027
444 Ga0207646_10040843
445 Ga0207650_10001048
446 Ga0207650_10038798
447 Ga0207687_10018991
448 Ga0207644_10058296
449 Ga0207706_10002581
450 Ga0207669_10019689
451 Ga0207691_10003295
452 Ga0207711_10040531
453 Ga0207711_10079256
454 Ga0207689_10001696
455 Ga0207661_10002014
456 Ga0207661_10057616
457 Ga0207679_10009620
458 Ga0207667_10002467
459 Ga0207667_10098680
460 Ga0207640_10024712
461 Ga0207658_10129010
462 Ga0207703_10035371
463 Ga0207703_10047707
464 Ga0207639_10035739
465 Ga0207678_10003642
466 Ga0207678_10005218
467 Ga0207708_10001015
468 Ga0207676_10080800
469 Ga0207674_10000448
470 Ga0207674_10003532
471 Ga0207675_100009119
472 Ga0207698_10005135
473 Ga0209588_1000528
474 Ga0268266_10180474
475 Ga0268265_10028019
476 Ga0307405_10003874
477 Ga0307411_10098851
478 Ga0307415_100027454
479 Ga0373942_0002465
480 Ga0373961_0004105
481 Ga0373931_0008408
482 Ga0373947_0032111
483 Ga0316582_0072378
484 Ga0373925_0098518
485 Ga0395900_0065767
486 Ga0395898_0010869
487 Ga0395901_0017942
488 Ga0395901_0221411
489 Ga0439434_0003714
490 Ga0451577_0018174
491 Ga0466972_0008273
492 Ga0453684_0162647
493 Ga0495592_0016995
494 Ga0495580_0057472
495 Ga0495628_0108026
496 Ga0495587_0055974
497 Ga0495687_038993
498 Ga0496100_0078723
499 Ga0496101_0058711
500 Ga0496105_0114298
501 Ga0496106_0001371
502 Ga0496107_0025414
503 Ga0496108_0001086
504 Ga0496108_0047876
505 Ga0496109_0005086
506 Ga0496109_0057267
507 Ga0496110_0007806
508 Ga0496111_0061144
509 Ga0496112_0010879
510 Ga0496113_0029130
511 Ga0496114_0077500
512 Ga0501033_0126912
513 Ga0501046_0028485
514 Ga0501047_0101245
515 Ga0501068_0001693
516 Ga0501070_0073327
517 Ga0501074_0062843
518 Ga0501080_0076213
519 Ga0501083_0062606
520 Ga0501044_0000332
521 nmdc:mga0k408_6757_c1
522 nmdc:mga09592_105605_c1
523 nmdc:mga09592_20750_c1
524 nmdc:mga0qj67_21911_c1
525 nmdc:mga06r32_18233_c1
526 nmdc:mga08y16_27958_c1
527 nmdc:mga08x19_24344_c1
528 nmdc:mga08x19_41350_c1
529 nmdc:mga08x19_45774_c1
530 nmdc:mga08x19_82077_c1
531 Ga0495619_0031296
532 Ga0500652_000019
533 Ga0500601_000192
534 2513679680
535 2874623754
536 2885390599
537 2903772046
538 8056682320

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02254

TrkA_N

TrkA-N domain

471

599

0.9

PF00999

Na_H_Exchanger

Sodium/hydrogen exchanger family

70

434

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fwz-assembly1.cif.gz_B crystal structure of trka-n domain of inner membrane protein ybal from escherichia coli 0.8727 412 549
5bz2-assembly1.cif.gz_A-2 crystal structure of the sodium proton antiporter napa in inward-facing conformation 0.8477 4 387
5bz2-assembly1.cif.gz_A-2 crystal structure of the sodium proton antiporter napa in inward-facing conformation 0.8394 4 387
3fwz-assembly1.cif.gz_B crystal structure of trka-n domain of inner membrane protein ybal from escherichia coli 0.8372 412 549
7zp9-assembly1.cif.gz_L ktrab complex - ktra8 ring with a ktrb dimer on each side 0.8338 414 549
ID Description Score Start End Superfamily
af_Q58671_3_387_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8972 12 376 1.20.1530.20
af_I1ME88_42_441_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8801 6 375 1.20.1530.20
af_I1LMR0_38_443_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.878 6 379 1.20.1530.20
af_Q54GC7_13_418_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8662 6 375 1.20.1530.20
af_Q9ZTZ7_585_971_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8645 5 375 1.20.1530.20
ID Description Score Start End GO Terms
AF-A0A535DRW7-F1-model_v4 Cation:proton antiporter 0.9733 5 386 GO:0015297
GO:0016020
GO:1902600
AF-A0A370LVJ1-F1-model_v4 Cation:proton antiporter 0.9158 2 379 GO:0015297
GO:0016020
GO:1902600
AF-A0A5C1QD39-F1-model_v4 Sodium:proton exchanger 0.9158 2 374 GO:0006814
GO:0015297
GO:0016020
GO:1902600
AF-A0A842LJQ1-F1-model_v4 Cation:proton antiporter 0.9149 3 281 GO:0015297
GO:0016020
GO:1902600
AF-A0A855S363-F1-model_v4 deleted 0.9146 2 374

Map