F375974

General Info

Members Datasets Scaffolds Average Seq Length
269 168 538 395

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100005958|Ga0070670_1000059583
Length 426
Sequence MAETMTTRTRLSVLLISTPLLAFIVFGGILGKASAGGDQTFQHLRMFEDVVSLILNNYVEDAKVDKVMEGAMRGLADGLDPDSAYLTAAEVKDLQTSGPCVSLLAEPCKSTAVGDVGIELTRQYYLRVIAARDESPAAKAGLQTGDYVRAIDGKAARDLSVFEGMRLLRGTPGSKVTLTVIRGNAAEPRQIELVRERAPGAIVSGKMLSPDLGYLRIAAFGPDAAAKIKAQTAELQKTGAKQLIVDIRRTAEGSFDSGLEAARLFVPSGTLAMIAGRDPAAPKPVSQPPARPSDAPVKVSESAIKEKITAKTGDGAITVPVTLLVTTGTSGAAELFASALEGNKRAELVGERTLGRAAIQKLVPLPEGRGLWLTYARYTTPDGEAIQGHGLTPQLAVDEPDVDFDQQKPTTDPVLDAAVARTKKIG

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
107 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
114 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
120 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
121 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
122 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
123 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
124 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.2
Nodule 0
Rhizoplane 3.72
Rhizosphere 91.08
Stem 0
Stem Tuber 0
Unclassified 10.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100005958 3300005331 Bacteria 10311
2 Ga0065704_10001460 3300005289 Bacteria 9189
3 Ga0065715_10033362 3300005293 Unclassified 1958
4 Ga0065707_10000848 3300005295 Bacteria 17075
5 Ga0065707_10011133 3300005295 Bacteria 2295
6 Ga0065707_10161536 3300005295 Unclassified 1559
7 Ga0070683_100022986 3300005329 Bacteria 5574
8 Ga0070690_100045567 3300005330 Bacteria 2786
9 Ga0070690_100218786 3300005330 Bacteria 1333
10 Ga0070670_100091699 3300005331 Unclassified 2612
11 Ga0070666_10153606 3300005335 Bacteria 1606
12 Ga0070660_100200543 3300005339 Bacteria 1618
13 Ga0070689_100031642 3300005340 Bacteria 4022
14 Ga0070689_100296711 3300005340 Bacteria 1344
15 Ga0070668_100061949 3300005347 Bacteria 2898
16 Ga0070669_100002727 3300005353 Bacteria 12739
17 Ga0070675_100006081 3300005354 Bacteria 9250
18 Ga0070675_100325017 3300005354 Bacteria 1359
19 Ga0070671_100018308 3300005355 Bacteria 5688
20 Ga0070671_100105205 3300005355 Bacteria 2368
21 Ga0070674_100007095 3300005356 Bacteria 6590
22 Ga0070673_100011061 3300005364 Bacteria 6148
23 Ga0070673_100020016 3300005364 Bacteria 4819
24 Ga0070673_100103768 3300005364 Bacteria 2346
25 Ga0070688_100214428 3300005365 Bacteria 1353
26 Ga0070667_100088461 3300005367 Bacteria 2659
27 Ga0070713_100101432 3300005436 Bacteria 2493
28 Ga0070705_100094150 3300005440 Unclassified 1875
29 Ga0070700_100012877 3300005441 Bacteria 4685
30 Ga0070700_100036447 3300005441 Bacteria 2983
31 Ga0070700_100055457 3300005441 Bacteria 2480
32 Ga0070700_100072435 3300005441 Bacteria 2203
33 Ga0070694_100093355 3300005444 Bacteria 2115
34 Ga0070708_100101154 3300005445 Bacteria 2639
35 Ga0070662_100145561 3300005457 Bacteria 1840
36 Ga0070662_100147619 3300005457 Unclassified 1828
37 Ga0070681_10265087 3300005458 Bacteria 1630
38 Ga0068867_100000147 3300005459 Bacteria 45184
39 Ga0068867_100003203 3300005459 Bacteria 11532
40 Ga0070707_100075247 3300005468 Unclassified 3256
41 Ga0070698_100016957 3300005471 Bacteria 7678
42 Ga0070698_100345106 3300005471 Bacteria 1420
43 Ga0070699_100000339 3300005518 Bacteria 45340
44 Ga0070699_100058313 3300005518 Bacteria 3344
45 Ga0070699_100098849 3300005518 Bacteria 2557
46 Ga0070672_100204145 3300005543 Bacteria 1653
47 Ga0070695_100102559 3300005545 Bacteria 1929
48 Ga0070696_100116449 3300005546 Unclassified 1930
49 Ga0070704_100007503 3300005549 Bacteria 6493
50 Ga0070704_100086626 3300005549 Unclassified 2322
51 Ga0068857_100117681 3300005577 Bacteria 2391
52 Ga0068856_100197427 3300005614 Bacteria 2026
53 Ga0068859_100022329 3300005617 Bacteria 6345
54 Ga0068859_100113732 3300005617 Bacteria 2770
55 Ga0068870_10163475 3300005840 Bacteria 1322
56 Ga0068858_100042183 3300005842 Bacteria 4230
57 Ga0068858_100198662 3300005842 Bacteria 1896
58 Ga0068860_100063984 3300005843 Bacteria 3494
59 Ga0068862_100001293 3300005844 Bacteria 23404
60 Ga0068862_100018510 3300005844 Bacteria 5801
61 Ga0068862_100019035 3300005844 Bacteria 5725
62 Ga0075368_10069611 3300006042 Bacteria 1419
63 Ga0075364_10092087 3300006051 Bacteria 2012
64 Ga0075364_10165849 3300006051 Bacteria 1492
65 Ga0075362_10001024 3300006177 Bacteria 8609
66 Ga0075367_10020423 3300006178 Bacteria 3688
67 Ga0075367_10086368 3300006178 Bacteria 1904
68 Ga0075366_10015513 3300006195 Bacteria 4369
69 Ga0068871_100027465 3300006358 Bacteria 4452
70 Ga0068871_100232192 3300006358 Bacteria 1601
71 Ga0075428_100000574 3300006844 Bacteria 37525
72 Ga0075428_100012265 3300006844 Bacteria 9529
73 Ga0075430_100009573 3300006846 Bacteria 8187
74 Ga0075431_100139956 3300006847 Bacteria 2494
75 Ga0075431_100196185 3300006847 Bacteria 2067
76 Ga0075433_10013008 3300006852 Bacteria 6747
77 Ga0075434_100007060 3300006871 Bacteria 10368
78 Ga0075434_100139781 3300006871 Unclassified 2441
79 Ga0075434_100209535 3300006871 Bacteria 1969
80 Ga0075429_100046934 3300006880 Bacteria 3758
81 Ga0068865_100046317 3300006881 Bacteria 2983
82 Ga0097620_100022326 3300006931 Bacteria 6345
83 Ga0097620_100113721 3300006931 Bacteria 2770
84 Ga0075435_100000706 3300007076 Bacteria 20658
85 Ga0075435_100265751 3300007076 Bacteria 1462
86 Ga0105240_10214097 3300009093 Bacteria 2249
87 Ga0111539_10000043 3300009094 Bacteria 128570
88 Ga0111539_10002665 3300009094 Bacteria 23642
89 Ga0111539_10024324 3300009094 Bacteria 7436
90 Ga0111539_10106414 3300009094 Bacteria 3290
91 Ga0111539_10161854 3300009094 Bacteria 2617
92 Ga0111539_10427901 3300009094 Bacteria 1542
93 Ga0105245_10078793 3300009098 Bacteria 3007
94 Ga0114129_10003085 3300009147 Bacteria 23382
95 Ga0114129_10008315 3300009147 Bacteria 14804
96 Ga0114129_10009872 3300009147 Bacteria 13609
97 Ga0114129_10034456 3300009147 Bacteria 7151
98 Ga0114129_10071370 3300009147 Bacteria 4842
99 Ga0114129_10213042 3300009147 Bacteria 2611
100 Ga0114129_10230342 3300009147 Bacteria 2495
101 Ga0114129_10278734 3300009147 Unclassified 2234
102 Ga0114129_10394275 3300009147 Bacteria 1825
103 Ga0105243_10025234 3300009148 Bacteria 4539
104 Ga0105243_10041689 3300009148 Bacteria 3590
105 Ga0105241_10044563 3300009174 Bacteria 3362
106 Ga0105248_10124460 3300009177 Bacteria 2908
107 Ga0105248_10130218 3300009177 Unclassified 2838
108 Ga0157375_10017681 3300013308 Bacteria 6443
109 Ga0157380_10275742 3300014326 Bacteria 1536
110 Ga0157379_10205612 3300014968 Bacteria 1781
111 Ga0207688_10031340 3300025901 Bacteria 2935
112 Ga0207643_10016582 3300025908 Bacteria 4019
113 Ga0207643_10103755 3300025908 Unclassified 1669
114 Ga0207662_10005345 3300025918 Bacteria 6837
115 Ga0207646_10035924 3300025922 Bacteria 4474
116 Ga0207681_10000566 3300025923 Bacteria 25276
117 Ga0207681_10115817 3300025923 Unclassified 1957
118 Ga0207681_10153797 3300025923 Unclassified 1727
119 Ga0207650_10003068 3300025925 Bacteria 11504
120 Ga0207650_10092199 3300025925 Unclassified 2317
121 Ga0207650_10191253 3300025925 Bacteria 1635
122 Ga0207659_10001222 3300025926 Bacteria 15363
123 Ga0207659_10010394 3300025926 Bacteria 5850
124 Ga0207700_10010965 3300025928 Bacteria 5755
125 Ga0207690_10054553 3300025932 Bacteria 2688
126 Ga0207706_10041188 3300025933 Unclassified 4095
127 Ga0207706_10182727 3300025933 Unclassified 1842
128 Ga0207709_10212680 3300025935 Bacteria 1389
129 Ga0207670_10016190 3300025936 Bacteria 4474
130 Ga0207670_10096434 3300025936 Bacteria 2103
131 Ga0207670_10239483 3300025936 Bacteria 1397
132 Ga0207669_10021215 3300025937 Bacteria 3424
133 Ga0207691_10010263 3300025940 Bacteria 8984
134 Ga0207691_10253903 3300025940 Bacteria 1517
135 Ga0207711_10141981 3300025941 Bacteria 2161
136 Ga0207689_10061191 3300025942 Bacteria 3096
137 Ga0207689_10120099 3300025942 Bacteria 2162
138 Ga0207661_10056860 3300025944 Bacteria 3142
139 Ga0207679_10254716 3300025945 Bacteria 1494
140 Ga0207651_10000755 3300025960 Bacteria 13894
141 Ga0207651_10001779 3300025960 Bacteria 9999
142 Ga0207668_10045872 3300025972 Bacteria 2983
143 Ga0207640_10020281 3300025981 Bacteria 3945
144 Ga0207640_10128599 3300025981 Unclassified 1827
145 Ga0207658_10060835 3300025986 Unclassified 2820
146 Ga0207703_10027999 3300026035 Bacteria 4438
147 Ga0207703_10067120 3300026035 Bacteria 2952
148 Ga0207678_10079989 3300026067 Bacteria 2798
149 Ga0207708_10000690 3300026075 Bacteria 25620
150 Ga0207708_10033770 3300026075 Bacteria 3889
151 Ga0207708_10060660 3300026075 Bacteria 2887
152 Ga0207708_10143617 3300026075 Bacteria 1874
153 Ga0207641_10169021 3300026088 Bacteria 1994
154 Ga0207648_10000446 3300026089 Bacteria 45706
155 Ga0207648_10004738 3300026089 Bacteria 13899
156 Ga0207674_10021515 3300026116 Bacteria 6944
157 Ga0207674_10138806 3300026116 Bacteria 2391
158 Ga0207675_100381238 3300026118 Bacteria 1387
159 Ga0207698_10130295 3300026142 Bacteria 2148
160 Ga0207428_10000195 3300027907 Bacteria 84698
161 Ga0207428_10000224 3300027907 Bacteria 78533
162 Ga0207428_10003096 3300027907 Bacteria 16357
163 Ga0268265_10000540 3300028380 Bacteria 38471
164 Ga0268265_10005201 3300028380 Bacteria 8915
165 Ga0307405_10067435 3300031731 Bacteria 2286
166 Ga0307413_10021356 3300031824 Bacteria 3464
167 Ga0307413_10024562 3300031824 Bacteria 3288
168 Ga0307413_10026700 3300031824 Bacteria 3187
169 Ga0307410_10087451 3300031852 Bacteria 2204
170 Ga0307406_10085641 3300031901 Bacteria 2108
171 Ga0307407_10067234 3300031903 Bacteria 2117
172 Ga0307409_100009438 3300031995 Bacteria 5994
173 Ga0307416_100264801 3300032002 Bacteria 1683
174 Ga0307416_100281164 3300032002 Bacteria 1641
175 Ga0307411_10026452 3300032005 Bacteria 3495
176 Ga0307411_10179078 3300032005 Unclassified 1607
177 Ga0307415_100013074 3300032126 Bacteria 4830
178 Ga0373939_0017893 3300035114 Bacteria 1889
179 Ga0373946_0031197 3300035171 Bacteria 2132
180 Ga0373961_0022507 3300035241 Unclassified 1687
181 Ga0373933_0011289 3300035724 Bacteria 4918
182 Ga0373937_0114775 3300036401 Bacteria 2507
183 Ga0373925_0022288 3300037068 Bacteria 4619
184 Ga0395901_0111963 3300038443 Bacteria 2867
185 Ga0450896_002967 3300042133 Bacteria 2227
186 Ga0439446_0009297 3300042156 Bacteria 2629
187 Ga0451577_0055173 3300042876 Bacteria 3546
188 Ga0451576_0031953 3300045051 Bacteria 5610
189 Ga0495653_0032361 3300046463 Bacteria 4153
190 Ga0495594_0106802 3300046499 Bacteria 1577
191 Ga0495642_0046280 3300046528 Bacteria 1780
192 Ga0495621_0014898 3300046539 Bacteria 2470
193 Ga0495633_0065619 3300046558 Unclassified 1696
194 Ga0495659_0012321 3300046664 Bacteria 2767
195 Ga0495659_0039109 3300046664 Bacteria 1686
196 Ga0495588_0004543 3300046674 Bacteria 6136
197 Ga0495658_0065966 3300046683 Bacteria 2090
198 Ga0495613_0093187 3300046689 Bacteria 2181
199 Ga0496101_0026393 3300048904 Bacteria 4039
200 Ga0496102_0030448 3300048905 Bacteria 4831
201 Ga0496106_0099601 3300048909 Bacteria 2253
202 Ga0496108_0083319 3300048911 Bacteria 2713
203 Ga0496109_0109255 3300048912 Bacteria 2571
204 Ga0496110_0084984 3300048913 Bacteria 2825
205 Ga0496111_0199677 3300048914 Bacteria 1487
206 Ga0496112_0071147 3300048915 Bacteria 3438
207 Ga0496112_0103278 3300048915 Bacteria 2820
208 Ga0496112_0194852 3300048915 Bacteria 1987
209 Ga0501031_0138587 3300049568 Unclassified 1590
210 Ga0501034_0007162 3300049571 Bacteria 11902
211 Ga0501036_0030454 3300049572 Bacteria 4558
212 Ga0501036_0076950 3300049572 Bacteria 2823
213 Ga0501038_0083495 3300049574 Bacteria 2689
214 Ga0501040_0030733 3300049576 Bacteria 3629
215 Ga0501041_0090943 3300049577 Bacteria 1884
216 Ga0501042_0122156 3300049578 Unclassified 1875
217 Ga0501043_0099922 3300049579 Bacteria 2281
218 Ga0501047_0018262 3300049581 Bacteria 6722
219 Ga0501067_0112819 3300049583 Bacteria 1512
220 Ga0501071_0010972 3300049587 Bacteria 6083
221 Ga0501071_0053268 3300049587 Bacteria 2918
222 Ga0501073_0010251 3300049589 Bacteria 6883
223 Ga0501074_0089474 3300049590 Bacteria 2205
224 Ga0501074_0179623 3300049590 Bacteria 1510
225 Ga0501075_0048339 3300049591 Bacteria 3197
226 Ga0501076_0054842 3300049592 Bacteria 3160
227 Ga0501076_0061805 3300049592 Bacteria 2981
228 Ga0501076_0076050 3300049592 Bacteria 2692
229 Ga0501077_0186509 3300049593 Bacteria 1318
230 Ga0501080_0051649 3300049742 Bacteria 3826
231 Ga0501081_0030173 3300049743 Bacteria 3669
232 Ga0501081_0223470 3300049743 Bacteria 1370
233 Ga0501045_0002036 3300049824 Bacteria 13650
234 Ga0501045_0008651 3300049824 Bacteria 7096
235 nmdc:mga03683_844_c1 3300050489 Bacteria 8813
236 nmdc:mga00v17_164866_c1 3300050491 Bacteria 1428
237 nmdc:mga00v17_2240_c1 3300050491 Bacteria 9912
238 nmdc:mga0k408_7158_c1 3300050493 Bacteria 5962
239 nmdc:mga06z11_101717_c1 3300050494 Unclassified 1578
240 nmdc:mga06z11_57440_c1 3300050494 Bacteria 2016
241 nmdc:mga05p37_10089_c1 3300050507 Bacteria 11210
242 nmdc:mga05p37_104162_c1 3300050507 Bacteria 3491
243 nmdc:mga05p37_137732_c1 3300050507 Bacteria 2992
244 nmdc:mga05p37_18669_c1 3300050507 Bacteria 8381
245 nmdc:mga05p37_268368_c1 3300050507 Unclassified 2040
246 nmdc:mga05p37_8580_c1 3300050507 Bacteria 12083
247 nmdc:mga09592_22225_c1 3300050508 Bacteria 5235
248 nmdc:mga09592_322767_c1 3300050508 Bacteria 1337
249 nmdc:mga09592_51541_c1 3300050508 Bacteria 3472
250 nmdc:mga06r32_123562_c1 3300050510 Bacteria 2554
251 nmdc:mga06r32_139866_c1 3300050510 Bacteria 2396
252 nmdc:mga06r32_419080_c1 3300050510 Bacteria 1320
253 nmdc:mga08y16_20288_c1 3300050511 Bacteria 7016
254 nmdc:mga08y16_241876_c1 3300050511 Bacteria 1865
255 nmdc:mga08y16_25_c1 3300050511 Bacteria 235789
256 nmdc:mga08y16_3489_c1 3300050511 Bacteria 16324
257 nmdc:mga08y16_384178_c1 3300050511 Bacteria 1439
258 nmdc:mga08y16_54699_c1 3300050511 Bacteria 4171
259 nmdc:mga0n895_151057_c1 3300050512 Bacteria 2353
260 nmdc:mga0n895_437639_c1 3300050512 Bacteria 1321
261 nmdc:mga0a205_31709_c1 3300050515 Bacteria 5065
262 Ga0495595_0072568 3300053084 Bacteria 1629
263 Ga0495619_0034517 3300053085 Bacteria 3289
264 Ga0500556_0005115 3300053104 Bacteria 3711
265 Ga0501084_0078239 3300054114 Unclassified 2772
266 Ga0501082_0102184 3300060353 Bacteria 2480
267 Ga0530510_0010516 3300061734 Bacteria 6487
268 Ga0530510_0033578 3300061734 Bacteria 3694
269 Ga0530510_0048399 3300061734 Bacteria 3073
270 Ga0070670_100005958
271 Ga0065704_10001460
272 Ga0065715_10033362
273 Ga0065707_10000848
274 Ga0065707_10011133
275 Ga0065707_10161536
276 Ga0070683_100022986
277 Ga0070690_100045567
278 Ga0070690_100218786
279 Ga0070670_100091699
280 Ga0070666_10153606
281 Ga0070660_100200543
282 Ga0070689_100031642
283 Ga0070689_100296711
284 Ga0070668_100061949
285 Ga0070669_100002727
286 Ga0070675_100006081
287 Ga0070675_100325017
288 Ga0070671_100018308
289 Ga0070671_100105205
290 Ga0070674_100007095
291 Ga0070673_100011061
292 Ga0070673_100020016
293 Ga0070673_100103768
294 Ga0070688_100214428
295 Ga0070667_100088461
296 Ga0070713_100101432
297 Ga0070705_100094150
298 Ga0070700_100012877
299 Ga0070700_100036447
300 Ga0070700_100055457
301 Ga0070700_100072435
302 Ga0070694_100093355
303 Ga0070708_100101154
304 Ga0070662_100145561
305 Ga0070662_100147619
306 Ga0070681_10265087
307 Ga0068867_100000147
308 Ga0068867_100003203
309 Ga0070707_100075247
310 Ga0070698_100016957
311 Ga0070698_100345106
312 Ga0070699_100000339
313 Ga0070699_100058313
314 Ga0070699_100098849
315 Ga0070672_100204145
316 Ga0070695_100102559
317 Ga0070696_100116449
318 Ga0070704_100007503
319 Ga0070704_100086626
320 Ga0068857_100117681
321 Ga0068856_100197427
322 Ga0068859_100022329
323 Ga0068859_100113732
324 Ga0068870_10163475
325 Ga0068858_100042183
326 Ga0068858_100198662
327 Ga0068860_100063984
328 Ga0068862_100001293
329 Ga0068862_100018510
330 Ga0068862_100019035
331 Ga0075368_10069611
332 Ga0075364_10092087
333 Ga0075364_10165849
334 Ga0075362_10001024
335 Ga0075367_10020423
336 Ga0075367_10086368
337 Ga0075366_10015513
338 Ga0068871_100027465
339 Ga0068871_100232192
340 Ga0075428_100000574
341 Ga0075428_100012265
342 Ga0075430_100009573
343 Ga0075431_100139956
344 Ga0075431_100196185
345 Ga0075433_10013008
346 Ga0075434_100007060
347 Ga0075434_100139781
348 Ga0075434_100209535
349 Ga0075429_100046934
350 Ga0068865_100046317
351 Ga0097620_100022326
352 Ga0097620_100113721
353 Ga0075435_100000706
354 Ga0075435_100265751
355 Ga0105240_10214097
356 Ga0111539_10000043
357 Ga0111539_10002665
358 Ga0111539_10024324
359 Ga0111539_10106414
360 Ga0111539_10161854
361 Ga0111539_10427901
362 Ga0105245_10078793
363 Ga0114129_10003085
364 Ga0114129_10008315
365 Ga0114129_10009872
366 Ga0114129_10034456
367 Ga0114129_10071370
368 Ga0114129_10213042
369 Ga0114129_10230342
370 Ga0114129_10278734
371 Ga0114129_10394275
372 Ga0105243_10025234
373 Ga0105243_10041689
374 Ga0105241_10044563
375 Ga0105248_10124460
376 Ga0105248_10130218
377 Ga0157375_10017681
378 Ga0157380_10275742
379 Ga0157379_10205612
380 Ga0207688_10031340
381 Ga0207643_10016582
382 Ga0207643_10103755
383 Ga0207662_10005345
384 Ga0207646_10035924
385 Ga0207681_10000566
386 Ga0207681_10115817
387 Ga0207681_10153797
388 Ga0207650_10003068
389 Ga0207650_10092199
390 Ga0207650_10191253
391 Ga0207659_10001222
392 Ga0207659_10010394
393 Ga0207700_10010965
394 Ga0207690_10054553
395 Ga0207706_10041188
396 Ga0207706_10182727
397 Ga0207709_10212680
398 Ga0207670_10016190
399 Ga0207670_10096434
400 Ga0207670_10239483
401 Ga0207669_10021215
402 Ga0207691_10010263
403 Ga0207691_10253903
404 Ga0207711_10141981
405 Ga0207689_10061191
406 Ga0207689_10120099
407 Ga0207661_10056860
408 Ga0207679_10254716
409 Ga0207651_10000755
410 Ga0207651_10001779
411 Ga0207668_10045872
412 Ga0207640_10020281
413 Ga0207640_10128599
414 Ga0207658_10060835
415 Ga0207703_10027999
416 Ga0207703_10067120
417 Ga0207678_10079989
418 Ga0207708_10000690
419 Ga0207708_10033770
420 Ga0207708_10060660
421 Ga0207708_10143617
422 Ga0207641_10169021
423 Ga0207648_10000446
424 Ga0207648_10004738
425 Ga0207674_10021515
426 Ga0207674_10138806
427 Ga0207675_100381238
428 Ga0207698_10130295
429 Ga0207428_10000195
430 Ga0207428_10000224
431 Ga0207428_10003096
432 Ga0268265_10000540
433 Ga0268265_10005201
434 Ga0307405_10067435
435 Ga0307413_10021356
436 Ga0307413_10024562
437 Ga0307413_10026700
438 Ga0307410_10087451
439 Ga0307406_10085641
440 Ga0307407_10067234
441 Ga0307409_100009438
442 Ga0307416_100264801
443 Ga0307416_100281164
444 Ga0307411_10026452
445 Ga0307411_10179078
446 Ga0307415_100013074
447 Ga0373939_0017893
448 Ga0373946_0031197
449 Ga0373961_0022507
450 Ga0373933_0011289
451 Ga0373937_0114775
452 Ga0373925_0022288
453 Ga0395901_0111963
454 Ga0450896_002967
455 Ga0439446_0009297
456 Ga0451577_0055173
457 Ga0451576_0031953
458 Ga0495653_0032361
459 Ga0495594_0106802
460 Ga0495642_0046280
461 Ga0495621_0014898
462 Ga0495633_0065619
463 Ga0495659_0012321
464 Ga0495659_0039109
465 Ga0495588_0004543
466 Ga0495658_0065966
467 Ga0495613_0093187
468 Ga0496101_0026393
469 Ga0496102_0030448
470 Ga0496106_0099601
471 Ga0496108_0083319
472 Ga0496109_0109255
473 Ga0496110_0084984
474 Ga0496111_0199677
475 Ga0496112_0071147
476 Ga0496112_0103278
477 Ga0496112_0194852
478 Ga0501031_0138587
479 Ga0501034_0007162
480 Ga0501036_0030454
481 Ga0501036_0076950
482 Ga0501038_0083495
483 Ga0501040_0030733
484 Ga0501041_0090943
485 Ga0501042_0122156
486 Ga0501043_0099922
487 Ga0501047_0018262
488 Ga0501067_0112819
489 Ga0501071_0010972
490 Ga0501071_0053268
491 Ga0501073_0010251
492 Ga0501074_0089474
493 Ga0501074_0179623
494 Ga0501075_0048339
495 Ga0501076_0054842
496 Ga0501076_0061805
497 Ga0501076_0076050
498 Ga0501077_0186509
499 Ga0501080_0051649
500 Ga0501081_0030173
501 Ga0501081_0223470
502 Ga0501045_0002036
503 Ga0501045_0008651
504 nmdc:mga03683_844_c1
505 nmdc:mga00v17_164866_c1
506 nmdc:mga00v17_2240_c1
507 nmdc:mga0k408_7158_c1
508 nmdc:mga06z11_101717_c1
509 nmdc:mga06z11_57440_c1
510 nmdc:mga05p37_10089_c1
511 nmdc:mga05p37_104162_c1
512 nmdc:mga05p37_137732_c1
513 nmdc:mga05p37_18669_c1
514 nmdc:mga05p37_268368_c1
515 nmdc:mga05p37_8580_c1
516 nmdc:mga09592_22225_c1
517 nmdc:mga09592_322767_c1
518 nmdc:mga09592_51541_c1
519 nmdc:mga06r32_123562_c1
520 nmdc:mga06r32_139866_c1
521 nmdc:mga06r32_419080_c1
522 nmdc:mga08y16_20288_c1
523 nmdc:mga08y16_241876_c1
524 nmdc:mga08y16_25_c1
525 nmdc:mga08y16_3489_c1
526 nmdc:mga08y16_384178_c1
527 nmdc:mga08y16_54699_c1
528 nmdc:mga0n895_151057_c1
529 nmdc:mga0n895_437639_c1
530 nmdc:mga0a205_31709_c1
531 Ga0495595_0072568
532 Ga0495619_0034517
533 Ga0500556_0005115
534 Ga0501084_0078239
535 Ga0501082_0102184
536 Ga0530510_0010516
537 Ga0530510_0033578
538 Ga0530510_0048399

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03572

Peptidase_S41

Peptidase family S41

211

397

0.91

PF17820

PDZ_6

PDZ domain

127

182

0.91

PF00595

PDZ

PDZ domain

112

181

0.88

PF13180

PDZ_2

PDZ domain

114

193

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hck-assembly1.cif.gz_A-2 nmr fragment-based screening against the two pdz do-mains of mda-9 0.931 100 152
7rqh-assembly1.cif.gz_A crystal structure of carboxyl-terminal processing protease a mutant s302a, ctpa_s302a, of pseudomonas aeruginosa 0.8764 185 387
7rpq-assembly1.cif.gz_A crystal structure of carboxyl-terminal processing protease a, ctpa, of pseudomonas aeruginosa 0.8753 185 387
7x2e-assembly1.cif.gz_A-2 structure of ush1c pdz2 and coiled-coil in complex with cdhr2 c-terminal tail 0.8727 100 152
2z17-assembly1.cif.gz_A-2 crystal structure of pdz domain from human pleckstrin homology, sec7 0.8683 109 141
ID Description Score Start End Superfamily
af_Q5ZA08_147_239_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9437 100 182 2.30.42.10
5g1dB01 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9227 100 152 2.30.42.10
af_O23614_210_301_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9166 99 184 2.30.42.10
1fc6A02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9067 99 183 2.30.42.10
af_I1NHY3_318_500_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.8752 186 358 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A7S1DFW8-F1-model_v4 PDZ domain-containing protein 0.9213 98 180 GO:0004175
AF-A0A7S0YHU7-F1-model_v4 PDZ domain-containing protein 0.9006 94 184
AF-A0A2V8QFA2-F1-model_v4 Tail specific protease domain-containing protein 0.8957 201 380 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288
AF-A0A396QP83-F1-model_v4 Tail specific protease domain-containing protein 0.8946 240 383 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288
AF-A0A7S2VIU4-F1-model_v4 Tail specific protease domain-containing protein 0.8941 180 356 GO:0004175
GO:0006508
GO:0008236

Map