F375822

General Info

Members Datasets Scaffolds Average Seq Length
268 232 536 792

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_96619_c1|nmdc:mga06r32_96619_c1_583_2883
Length 766
Sequence VNNLKDISVELPKRRLTVFTGVSGSGKSSLVFGTIAAESQRLINETYSTFVQGFMPTMARPDVDVLDGLTTAILVDQERMGANPRSTVGTATDANAMLRILFSRLGRPHIGSPNAYSFNVPSVKASGAITVERGGKTKAQKATFNRLGGMCPRCEGMGSVSDFDLSALYDDTKSLSEGALKVPGYSMDGWYGRIFGGAGLPMDKPIGKYTKKERHKLLYGEAEKIKVEGVNLTYEGVIPKIQKSMLSKDREAMQPHIRAFVDRAITFTSCPECDGTRLAKEALSSKIRGKNIADVCTMQISDLADWVRDLDEPSVAPLLTGLQHLLDSFAEIGLGYLSLDRPAGTLSGGEAQRTKMIRHLGSSLTDVTYVFDEPTIGLHPHDIERMNNLLVQLRDKGNTVLVVEHKPETIAIGDHVVDLGPGAGTEGGTVCFEGTVEGLRGSDTTTGRHLDDRATLKDSVREASDALEVRKASTHNLQNVNVDIPLGMLCAVTGVAGSGKSSLIHGSVAGREGVVVIDQGAIRGSRRSNPATYTGVLDPIRKAFAKANGVKPALFSSNSEGACPVCNGAGVIYTELGIMETVESTCEECEGKRFQAAVLEYTLGGRNIAEVLAMSVNEAEEFFGDGEARTPAAHKILDRLADVGLGYLTLGQPLTTLSGGERQRLKLATQMAEKGDVYILDEPTTGLHLADVEQLLGLLDRLVDGGKSVIVIEHHQAVMAHADWIIDLGPGAGHDGGRIVFEGTPADLVADRSTLTGKHLAEYVGS

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
110 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
111 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
112 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
113 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
114 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
115 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
116 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
117 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
130 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
171 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
172 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
173 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
176 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
177 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
178 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
179 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
180 2643221613 Oerskovia sp. Root22 Isolate Unclassified
181 2643221721 Oerskovia sp. Root918 Isolate Unclassified
182 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
183 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
184 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
185 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
186 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
187 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
188 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
189 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
190 2808606394 Promicromonospora sp. C35 Isolate Unclassified
191 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
192 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
193 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
194 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
195 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
196 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
197 2858882152 Micromonospora noduli MED15 Isolate Nodule
198 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
199 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
200 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
201 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
202 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
203 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
204 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
205 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
206 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
207 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
208 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
209 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
210 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
211 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
212 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
213 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
214 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
215 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
216 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
217 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
218 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
219 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
220 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
221 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
222 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
223 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
224 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
225 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
226 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
227 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
228 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
229 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
230 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
231 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
232 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.73
Metatranscriptomes 0
Isolates 21.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.73
Nodule 1.49
Rhizoplane 5.6
Rhizosphere 78.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_96619_c1 3300050510 Bacteria 2894
2 LJQas_1001552 3300000549 Bacteria 3403
3 Ga0068868_100002656 3300005338 Bacteria 12403
4 Ga0070689_100016638 3300005340 Bacteria 5383
5 Ga0070668_100001780 3300005347 Bacteria 15656
6 Ga0070669_100039437 3300005353 Bacteria 3432
7 Ga0070674_100003233 3300005356 Bacteria 9094
8 Ga0070673_100068366 3300005364 Bacteria 2844
9 Ga0070688_100004005 3300005365 Bacteria 7639
10 Ga0070667_100005709 3300005367 Bacteria 10397
11 Ga0070709_10004024 3300005434 Bacteria 7930
12 Ga0070710_10025644 3300005437 Bacteria 3123
13 Ga0070700_100005259 3300005441 Bacteria 6845
14 Ga0070694_100004412 3300005444 Bacteria 8459
15 Ga0070678_100000273 3300005456 Bacteria 23976
16 Ga0068867_100002987 3300005459 Bacteria 11917
17 Ga0068853_100002811 3300005539 Bacteria 13177
18 Ga0070672_100024623 3300005543 Bacteria 4452
19 Ga0070695_100008824 3300005545 Bacteria 5990
20 Ga0070696_100000796 3300005546 Bacteria 20313
21 Ga0070693_100004100 3300005547 Bacteria 6859
22 Ga0070665_100005361 3300005548 Bacteria 13239
23 Ga0070704_100001017 3300005549 Bacteria 14393
24 Ga0068855_100124339 3300005563 Bacteria 2951
25 Ga0068854_100023656 3300005578 Bacteria 4198
26 Ga0068852_100081908 3300005616 Bacteria 2866
27 Ga0068866_10000419 3300005718 Bacteria 19721
28 Ga0068861_100022969 3300005719 Bacteria 4497
29 Ga0068858_100011154 3300005842 Bacteria 8495
30 Ga0068858_100046788 3300005842 Bacteria 4010
31 Ga0068860_100000775 3300005843 Bacteria 35961
32 Ga0068862_100005734 3300005844 Bacteria 10366
33 Ga0081455_10007274 3300005937 Bacteria 11682
34 Ga0081538_10001159 3300005981 Bacteria 27863
35 Ga0081539_10003608 3300005985 Bacteria 18711
36 Ga0081539_10030778 3300005985 Bacteria 3325
37 Ga0070715_10009505 3300006163 Bacteria 3431
38 Ga0070716_100000471 3300006173 Bacteria 16672
39 Ga0070712_100007947 3300006175 Bacteria 6650
40 Ga0075367_10007041 3300006178 Bacteria 5729
41 Ga0097621_100033270 3300006237 Bacteria 4104
42 Ga0075428_100000700 3300006844 Bacteria 34626
43 Ga0075430_100042894 3300006846 Bacteria 3824
44 Ga0075431_100002774 3300006847 Bacteria 16973
45 Ga0075431_100014746 3300006847 Bacteria 7913
46 Ga0075434_100014814 3300006871 Bacteria 7461
47 Ga0075429_100006279 3300006880 Bacteria 10285
48 Ga0075429_100011695 3300006880 Bacteria 7611
49 Ga0075436_100024019 3300006914 Bacteria 4190
50 Ga0105251_10015975 3300009011 Bacteria 4079
51 Ga0111539_10003954 3300009094 Bacteria 19467
52 Ga0114129_10000084 3300009147 Bacteria 87485
53 Ga0114129_10015836 3300009147 Bacteria 10722
54 Ga0114129_10136532 3300009147 Bacteria 3365
55 Ga0105243_10001826 3300009148 Bacteria 18210
56 Ga0105243_10022856 3300009148 Bacteria 4753
57 Ga0105242_10000459 3300009176 Bacteria 32413
58 Ga0105248_10003999 3300009177 Bacteria 16302
59 Ga0105238_10032549 3300009551 Bacteria 5306
60 Ga0105239_10002709 3300010375 Bacteria 22282
61 Ga0105239_10012460 3300010375 Bacteria 9470
62 Ga0105246_10002382 3300011119 Bacteria 11342
63 Ga0105246_10002501 3300011119 Bacteria 11117
64 Ga0105246_10080000 3300011119 Bacteria 2325
65 Ga0157378_10003979 3300013297 Bacteria 13058
66 Ga0163162_10006338 3300013306 Bacteria 11457
67 Ga0157372_10010164 3300013307 Bacteria 9993
68 Ga0157375_10009568 3300013308 Bacteria 8510
69 Ga0157380_10001560 3300014326 Bacteria 15073
70 Ga0157379_10013893 3300014968 Bacteria 7057
71 Ga0163161_10003090 3300017792 Bacteria 11750
72 Ga0209051_1007409 3300025303 Bacteria 6001
73 Ga0207655_1006909 3300025728 Bacteria 7445
74 Ga0207655_1010219 3300025728 Bacteria 5714
75 Ga0207710_10004040 3300025900 Bacteria 6454
76 Ga0207685_10001517 3300025905 Bacteria 4910
77 Ga0207705_10014910 3300025909 Bacteria 5590
78 Ga0207707_10004588 3300025912 Bacteria 12136
79 Ga0207695_10026238 3300025913 Bacteria 6504
80 Ga0207671_10008231 3300025914 Bacteria 8878
81 Ga0207693_10000381 3300025915 Bacteria 40785
82 Ga0207649_10001504 3300025920 Bacteria 13697
83 Ga0207652_10018189 3300025921 Bacteria 5761
84 Ga0207694_10011703 3300025924 Bacteria 6618
85 Ga0207650_10018243 3300025925 Bacteria 4922
86 Ga0207687_10000587 3300025927 Bacteria 24594
87 Ga0207690_10041006 3300025932 Bacteria 3031
88 Ga0207686_10015983 3300025934 Bacteria 4206
89 Ga0207670_10006540 3300025936 Bacteria 6470
90 Ga0207670_10008264 3300025936 Bacteria 5864
91 Ga0207669_10001288 3300025937 Bacteria 10653
92 Ga0207704_10001708 3300025938 Bacteria 9820
93 Ga0207691_10000197 3300025940 Bacteria 57903
94 Ga0207711_10029205 3300025941 Bacteria 4647
95 Ga0207689_10017429 3300025942 Bacteria 6077
96 Ga0207668_10004077 3300025972 Bacteria 8587
97 Ga0207640_10010012 3300025981 Bacteria 5325
98 Ga0207677_10027329 3300026023 Bacteria 3592
99 Ga0207639_10018307 3300026041 Bacteria 4977
100 Ga0207678_10000139 3300026067 Bacteria 59389
101 Ga0207708_10018949 3300026075 Bacteria 5183
102 Ga0207702_10026387 3300026078 Bacteria 4823
103 Ga0207641_10015702 3300026088 Bacteria 6204
104 Ga0207648_10000462 3300026089 Bacteria 45206
105 Ga0207675_100000768 3300026118 Bacteria 31981
106 Ga0207683_10000575 3300026121 Bacteria 33996
107 Ga0207683_10001044 3300026121 Bacteria 25233
108 Ga0207698_10032393 3300026142 Bacteria 3786
109 Ga0207428_10056567 3300027907 Bacteria 3116
110 Ga0268265_10014518 3300028380 Bacteria 5369
111 Ga0268264_10004232 3300028381 Bacteria 12249
112 Ga0265340_10000392 3300031247 Bacteria 23411
113 Ga0307407_10005776 3300031903 Bacteria 5412
114 Ga0307409_100040458 3300031995 Bacteria 3471
115 Ga0307416_100030259 3300032002 Bacteria 4060
116 Ga0373942_0001739 3300035207 Bacteria 5525
117 Ga0395899_0006122 3300037312 Bacteria 9321
118 Ga0395899_0011854 3300037312 Bacteria 6673
119 Ga0395900_0032100 3300037418 Bacteria 5399
120 Ga0395898_0001946 3300037466 Bacteria 26125
121 Ga0395898_0002202 3300037466 Bacteria 23805
122 Ga0395901_0003081 3300038443 Bacteria 16789
123 Ga0395901_0007109 3300038443 Bacteria 11309
124 Ga0436365_1327609 3300039437 Bacteria 21571
125 Ga0439466_0009203 3300041411 Bacteria 3699
126 Ga0439431_0002410 3300041997 Bacteria 4139
127 Ga0439433_0003331 3300041999 Bacteria 3443
128 Ga0439442_000046 3300042002 Bacteria 27954
129 Ga0450920_000128 3300042122 Bacteria 10399
130 Ga0450907_000109 3300042146 Bacteria 31147
131 Ga0439434_0000505 3300042435 Bacteria 11129
132 Ga0450918_000300 3300042531 Bacteria 11094
133 Ga0466969_0018446 3300044656 Bacteria 3634
134 Ga0466961_0009617 3300044693 Bacteria 6153
135 Ga0466963_0008906 3300044694 Bacteria 6024
136 Ga0466971_0000206 3300044719 Bacteria 22731
137 Ga0466959_0025356 3300045049 Bacteria 4393
138 Ga0466967_0010513 3300045976 Bacteria 6949
139 Ga0466967_0019020 3300045976 Bacteria 5512
140 Ga0466967_0071221 3300045976 Bacteria 3112
141 Ga0495638_0006411 3300046460 Bacteria 8563
142 Ga0495651_0008086 3300046462 Bacteria 8062
143 Ga0495594_0003603 3300046499 Bacteria 7963
144 Ga0495628_0003466 3300046516 Bacteria 14111
145 Ga0495643_0005595 3300046522 Bacteria 8453
146 Ga0495597_0015036 3300046542 Bacteria 3671
147 Ga0495645_0000018 3300046543 Bacteria 155263
148 Ga0495687_002640 3300047443 Bacteria 14021
149 Ga0496100_0007272 3300048903 Bacteria 6091
150 Ga0496101_0003367 3300048904 Bacteria 9962
151 Ga0496102_0001190 3300048905 Bacteria 23615
152 Ga0496102_0001613 3300048905 Bacteria 19879
153 Ga0496102_0031500 3300048905 Bacteria 4757
154 Ga0496103_0001391 3300048906 Bacteria 16284
155 Ga0496103_0042274 3300048906 Bacteria 2804
156 Ga0496104_0004459 3300048907 Bacteria 12198
157 Ga0496107_0000760 3300048910 Bacteria 18575
158 Ga0496107_0017020 3300048910 Bacteria 5111
159 Ga0496112_0009012 3300048915 Bacteria 8959
160 Ga0496114_0001875 3300048917 Bacteria 15936
161 Ga0496114_0024968 3300048917 Bacteria 4880
162 Ga0496115_0004439 3300048918 Bacteria 10169
163 Ga0496115_0043964 3300048918 Bacteria 3562
164 Ga0496126_0000040 3300048929 Bacteria 345144
165 Ga0501032_0001568 3300049569 Bacteria 18233
166 Ga0501033_0001460 3300049570 Bacteria 20958
167 Ga0501034_0000016 3300049571 Bacteria 289751
168 Ga0501034_0003113 3300049571 Bacteria 19113
169 Ga0501034_0065752 3300049571 Bacteria 3639
170 Ga0501036_0024783 3300049572 Bacteria 5058
171 Ga0501037_0022409 3300049573 Bacteria 4672
172 Ga0501037_0058920 3300049573 Bacteria 2802
173 Ga0501040_0059250 3300049576 Bacteria 2630
174 Ga0501041_0013539 3300049577 Bacteria 4838
175 Ga0501042_0037126 3300049578 Bacteria 3457
176 Ga0501046_0009451 3300049580 Bacteria 8427
177 Ga0501047_0054642 3300049581 Bacteria 3862
178 Ga0501071_0005295 3300049587 Bacteria 8274
179 Ga0501075_0023127 3300049591 Bacteria 4548
180 Ga0501083_0005470 3300049744 Bacteria 8996
181 Ga0501044_0015684 3300049823 Bacteria 8158
182 Ga0501044_0065086 3300049823 Bacteria 3718
183 Ga0501045_0015174 3300049824 Bacteria 5467
184 nmdc:mga03683_4898_c1 3300050489 Bacteria 4474
185 nmdc:mga00v17_31953_c1 3300050491 Bacteria 2440
186 nmdc:mga0yw44_762_c1 3300050492 Bacteria 11943
187 nmdc:mga05p37_6142_c1 3300050507 Bacteria 14134
188 nmdc:mga05p37_678_c1 3300050507 Bacteria 37695
189 nmdc:mga09592_3_c1 3300050508 Bacteria 144376
190 nmdc:mga0qj67_17_c1 3300050509 Bacteria 121673
191 nmdc:mga0qj67_4976_c1 3300050509 Bacteria 9657
192 nmdc:mga0qj67_86203_c1 3300050509 Bacteria 2520
193 nmdc:mga06r32_24964_c1 3300050510 Bacteria 5554
194 nmdc:mga06r32_27429_c1 3300050510 Bacteria 5320
195 nmdc:mga06r32_327_c1 3300050510 Bacteria 39873
196 nmdc:mga06r32_3846_c1 3300050510 Bacteria 13434
197 nmdc:mga06r32_50028_c1 3300050510 Bacteria 3998
198 nmdc:mga08y16_25927_c1 3300050511 Bacteria 6184
199 nmdc:mga0n895_17878_c1 3300050512 Bacteria 6549
200 nmdc:mga0rr50_45850_c1 3300050513 Bacteria 3216
201 nmdc:mga0a205_31609_c1 3300050515 Bacteria 5073
202 Ga0495601_0009637 3300053077 Bacteria 5718
203 Ga0495619_0035372 3300053085 Bacteria 3248
204 Ga0500643_000602 3300053087 Bacteria 24518
205 Ga0500555_000063 3300053103 Bacteria 54165
206 Ga0500597_000113 3300053120 Bacteria 16647
207 Ga0500645_000044 3300053730 Bacteria 109705
208 Ga0500661_001929 3300055283 Bacteria 3912
209 Ga0590075_002363 3300059424 Bacteria 4530
210 Ga0466962_0001021 3300061719 Bacteria 12800
211 Ga0530510_0009757 3300061734 Bacteria 6737
212 2515759876 2515154137 Bacteria 5711575
213 2516086174 2515154202 Bacteria 5471270
214 2516087982 2515154203 Bacteria 5458536
215 2523387162 2523231044 Bacteria 6434991
216 2644083096 2643221613 Bacteria 4622396
217 2644666111 2643221721 Bacteria 4486924
218 2691512107 2690315906 Bacteria 4517044
219 2739235219 2738543011 Bacteria 5731169
220 2739605057 2739367654 Bacteria 6049412
221 2760308011 2758568522 Bacteria 5953541
222 2795797914 2795385472 Bacteria 6627535
223 2804846455 2802429296 Bacteria 7227771
224 2808874665 2808606365 Bacteria 4301966
225 2808893500 2808606370 Bacteria 4942454
226 2809028267 2808606394 Bacteria 6248540
227 2819690078 2818991462 Bacteria 4320267
228 2855670655 2855670206 Bacteria 7120389
229 2855679295 2855676851 Bacteria 7063653
230 2857291195 2857288857 Bacteria 7189066
231 2857742043 2857740372 Bacteria 4782044
232 2858854172 2858848962 Bacteria 6963058
233 2858887150 2858882152 Bacteria 7230291
234 2858893485 2858888857 Bacteria 7060307
235 2858897880 2858895516 Bacteria 7378898
236 2867308581 2867302475 Bacteria 7087181
237 2867318518 2867312974 Bacteria 7058875
238 2867320502 2867319477 Bacteria 7069771
239 2869053811 2869048445 Bacteria 6875584
240 2869068471 2869061728 Bacteria 7112407
241 2869069519 2869068681 Bacteria 7205615
242 2875391972 2875391855 Bacteria 7600475
243 2880496742 2880495981 Bacteria 7340502
244 2889301782 2889300758 Bacteria 5690814
245 2904498155 2904497146 Bacteria 4731781
246 2904777513 2904776348 Bacteria 4658726
247 2910811544 2910809715 Bacteria 4982797
248 2919034885 2919034639 Bacteria 4763403
249 2919051369 2919051321 Bacteria 4210889
250 2919059706 2919059106 Bacteria 4991624
251 2919540349 2919538618 Bacteria 4677069
252 2929223288 2929219909 Bacteria 6984360
253 2929231653 2929226422 Bacteria 7248583
254 2932428201 2932426870 Bacteria 4547726
255 2933421039 2933418574 Bacteria 4476724
256 2935891435 2935890801 Bacteria 4593001
257 2939648604 2939647034 Bacteria 4681660
258 2939675342 2939674588 Bacteria 4844420
259 2939747218 2939743619 Bacteria 5762299
260 2945922988 2945920336 Bacteria 4501603
261 2946041305 2946037020 Bacteria 4900426
262 2954002411 2953998280 Bacteria 4812144
263 2996224139 2996221748 Bacteria 6799777
264 8003832003 8003830390 Bacteria 6541657
265 8003876212 8003870546 Bacteria 7396674
266 8054708335 8054704163 Bacteria 7247792
267 8054740092 8054734606 Bacteria 6947278
268 8057572121 8057568493 Bacteria 7221719
269 nmdc:mga06r32_96619_c1
270 LJQas_1001552
271 Ga0068868_100002656
272 Ga0070689_100016638
273 Ga0070668_100001780
274 Ga0070669_100039437
275 Ga0070674_100003233
276 Ga0070673_100068366
277 Ga0070688_100004005
278 Ga0070667_100005709
279 Ga0070709_10004024
280 Ga0070710_10025644
281 Ga0070700_100005259
282 Ga0070694_100004412
283 Ga0070678_100000273
284 Ga0068867_100002987
285 Ga0068853_100002811
286 Ga0070672_100024623
287 Ga0070695_100008824
288 Ga0070696_100000796
289 Ga0070693_100004100
290 Ga0070665_100005361
291 Ga0070704_100001017
292 Ga0068855_100124339
293 Ga0068854_100023656
294 Ga0068852_100081908
295 Ga0068866_10000419
296 Ga0068861_100022969
297 Ga0068858_100011154
298 Ga0068858_100046788
299 Ga0068860_100000775
300 Ga0068862_100005734
301 Ga0081455_10007274
302 Ga0081538_10001159
303 Ga0081539_10003608
304 Ga0081539_10030778
305 Ga0070715_10009505
306 Ga0070716_100000471
307 Ga0070712_100007947
308 Ga0075367_10007041
309 Ga0097621_100033270
310 Ga0075428_100000700
311 Ga0075430_100042894
312 Ga0075431_100002774
313 Ga0075431_100014746
314 Ga0075434_100014814
315 Ga0075429_100006279
316 Ga0075429_100011695
317 Ga0075436_100024019
318 Ga0105251_10015975
319 Ga0111539_10003954
320 Ga0114129_10000084
321 Ga0114129_10015836
322 Ga0114129_10136532
323 Ga0105243_10001826
324 Ga0105243_10022856
325 Ga0105242_10000459
326 Ga0105248_10003999
327 Ga0105238_10032549
328 Ga0105239_10002709
329 Ga0105239_10012460
330 Ga0105246_10002382
331 Ga0105246_10002501
332 Ga0105246_10080000
333 Ga0157378_10003979
334 Ga0163162_10006338
335 Ga0157372_10010164
336 Ga0157375_10009568
337 Ga0157380_10001560
338 Ga0157379_10013893
339 Ga0163161_10003090
340 Ga0209051_1007409
341 Ga0207655_1006909
342 Ga0207655_1010219
343 Ga0207710_10004040
344 Ga0207685_10001517
345 Ga0207705_10014910
346 Ga0207707_10004588
347 Ga0207695_10026238
348 Ga0207671_10008231
349 Ga0207693_10000381
350 Ga0207649_10001504
351 Ga0207652_10018189
352 Ga0207694_10011703
353 Ga0207650_10018243
354 Ga0207687_10000587
355 Ga0207690_10041006
356 Ga0207686_10015983
357 Ga0207670_10006540
358 Ga0207670_10008264
359 Ga0207669_10001288
360 Ga0207704_10001708
361 Ga0207691_10000197
362 Ga0207711_10029205
363 Ga0207689_10017429
364 Ga0207668_10004077
365 Ga0207640_10010012
366 Ga0207677_10027329
367 Ga0207639_10018307
368 Ga0207678_10000139
369 Ga0207708_10018949
370 Ga0207702_10026387
371 Ga0207641_10015702
372 Ga0207648_10000462
373 Ga0207675_100000768
374 Ga0207683_10000575
375 Ga0207683_10001044
376 Ga0207698_10032393
377 Ga0207428_10056567
378 Ga0268265_10014518
379 Ga0268264_10004232
380 Ga0265340_10000392
381 Ga0307407_10005776
382 Ga0307409_100040458
383 Ga0307416_100030259
384 Ga0373942_0001739
385 Ga0395899_0006122
386 Ga0395899_0011854
387 Ga0395900_0032100
388 Ga0395898_0001946
389 Ga0395898_0002202
390 Ga0395901_0003081
391 Ga0395901_0007109
392 Ga0436365_1327609
393 Ga0439466_0009203
394 Ga0439431_0002410
395 Ga0439433_0003331
396 Ga0439442_000046
397 Ga0450920_000128
398 Ga0450907_000109
399 Ga0439434_0000505
400 Ga0450918_000300
401 Ga0466969_0018446
402 Ga0466961_0009617
403 Ga0466963_0008906
404 Ga0466971_0000206
405 Ga0466959_0025356
406 Ga0466967_0010513
407 Ga0466967_0019020
408 Ga0466967_0071221
409 Ga0495638_0006411
410 Ga0495651_0008086
411 Ga0495594_0003603
412 Ga0495628_0003466
413 Ga0495643_0005595
414 Ga0495597_0015036
415 Ga0495645_0000018
416 Ga0495687_002640
417 Ga0496100_0007272
418 Ga0496101_0003367
419 Ga0496102_0001190
420 Ga0496102_0001613
421 Ga0496102_0031500
422 Ga0496103_0001391
423 Ga0496103_0042274
424 Ga0496104_0004459
425 Ga0496107_0000760
426 Ga0496107_0017020
427 Ga0496112_0009012
428 Ga0496114_0001875
429 Ga0496114_0024968
430 Ga0496115_0004439
431 Ga0496115_0043964
432 Ga0496126_0000040
433 Ga0501032_0001568
434 Ga0501033_0001460
435 Ga0501034_0000016
436 Ga0501034_0003113
437 Ga0501034_0065752
438 Ga0501036_0024783
439 Ga0501037_0022409
440 Ga0501037_0058920
441 Ga0501040_0059250
442 Ga0501041_0013539
443 Ga0501042_0037126
444 Ga0501046_0009451
445 Ga0501047_0054642
446 Ga0501071_0005295
447 Ga0501075_0023127
448 Ga0501083_0005470
449 Ga0501044_0015684
450 Ga0501044_0065086
451 Ga0501045_0015174
452 nmdc:mga03683_4898_c1
453 nmdc:mga00v17_31953_c1
454 nmdc:mga0yw44_762_c1
455 nmdc:mga05p37_6142_c1
456 nmdc:mga05p37_678_c1
457 nmdc:mga09592_3_c1
458 nmdc:mga0qj67_17_c1
459 nmdc:mga0qj67_4976_c1
460 nmdc:mga0qj67_86203_c1
461 nmdc:mga06r32_24964_c1
462 nmdc:mga06r32_27429_c1
463 nmdc:mga06r32_327_c1
464 nmdc:mga06r32_3846_c1
465 nmdc:mga06r32_50028_c1
466 nmdc:mga08y16_25927_c1
467 nmdc:mga0n895_17878_c1
468 nmdc:mga0rr50_45850_c1
469 nmdc:mga0a205_31609_c1
470 Ga0495601_0009637
471 Ga0495619_0035372
472 Ga0500643_000602
473 Ga0500555_000063
474 Ga0500597_000113
475 Ga0500645_000044
476 Ga0500661_001929
477 Ga0590075_002363
478 Ga0466962_0001021
479 Ga0530510_0009757
480 2515759876
481 2516086174
482 2516087982
483 2523387162
484 2644083096
485 2644666111
486 2691512107
487 2739235219
488 2739605057
489 2760308011
490 2795797914
491 2804846455
492 2808874665
493 2808893500
494 2809028267
495 2819690078
496 2855670655
497 2855679295
498 2857291195
499 2857742043
500 2858854172
501 2858887150
502 2858893485
503 2858897880
504 2867308581
505 2867318518
506 2867320502
507 2869053811
508 2869068471
509 2869069519
510 2875391972
511 2880496742
512 2889301782
513 2904498155
514 2904777513
515 2910811544
516 2919034885
517 2919051369
518 2919059706
519 2919540349
520 2929223288
521 2929231653
522 2932428201
523 2933421039
524 2935891435
525 2939648604
526 2939675342
527 2939747218
528 2945922988
529 2946041305
530 2954002411
531 2996224139
532 8003832003
533 8003876212
534 8054708335
535 8054740092
536 8057572121

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17755

UvrA_DNA-bind

UvrA DNA-binding domain

164

259

0.9

PF00005

ABC_tran

ABC transporter

477

685

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sh1-assembly1.cif.gz_B-2 class ii uvra protein - ecm16 0.8919 17 797
7sh1-assembly1.cif.gz_A class ii uvra protein - ecm16 0.8881 17 797
7sh1-assembly1.cif.gz_B-2 class ii uvra protein - ecm16 0.8879 17 797
7sh1-assembly1.cif.gz_A class ii uvra protein - ecm16 0.8841 17 797
3ux8-assembly1.cif.gz_A crystal structure of uvra 0.8377 21 796
ID Description Score Start End Superfamily
2vf8B05 Mainly Alpha;Up-down Bundle;ABC transporter ATPase like fold;ABC transporter ATPase 0.8766 552 702 1.20.1580.10
2ygrD06 Mainly Alpha;Up-down Bundle;ABC transporter ATPase like fold;ABC transporter ATPase 0.8698 557 688 1.20.1580.10
2ygrF01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8636 21 484 3.40.50.300
2ygrF01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8581 21 484 3.40.50.300
2r6fB06 Mainly Alpha;Up-down Bundle;ABC transporter ATPase like fold;ABC transporter ATPase 0.8518 553 688 1.20.1580.10
ID Description Score Start End GO Terms
AF-A0A7Y4N414-F1-model_v4 deleted 0.984 548 690
AF-A0A7Y4N414-F1-model_v4 deleted 0.964 548 690
AF-A0A7X7S5D0-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9622 545 795 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887
AF-A0A7X7S5D0-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9438 545 795 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887
AF-A0A7J9YAJ8-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.93 552 797 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887

Map