F375472

General Info

Members Datasets Scaffolds Average Seq Length
268 152 536 525

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10088296|Ga0114129_100882965
Length 641
Sequence MKILLYNPDNGVTRNFMPHLWMFLLKALTPPEHEVLLIDGNAQALDEEGLARFVREHEIGLVGIGAMTRMIAKAYRMADAVRGAGVPVVMGGPHITEAPDEALGRDGGPRHADAVALGEADETWPQIVEDAAQGRLKETYAPVDAAGKERKPSLQPYPSIPWGSMDLDQFNIIPSFLAPMLERVGGGWKTFRIIPVESGRGCPYGCEFCTVTGFFGDSIRFRTNESVVDELLQLKARAEREGGQVAVFFIDDNFAINIKRTKSLLRDIIAAGAEVYWTAQISANLLRDEELLDLIQASGGKWIFIGMESIDPANLDDVNKNFIKPGEYGAILERLARRNLLAITSFIFGLDNDTPGVSRRTLDQLSQWPAGLPVFGQLTPFPSTPLYVRLEAAGRLTRPKHWLDFAPYQMAHTPLKMTSAQAQAEVRQAWTDSYSPAAISRAVDSLQQSPVWLRISLLLGRLSFRGIYFPQMGRWDWMKVAAQNRRVIIKLVGAAIMLWLKPWREGRAIRRALKKINESTHGRVFMKDQKLQIECGRCGKTMSEILTEVEAGTIRDGIGPVYRHCDRCEKTTGWIESAAERDATEGAPQHPAAARSSSRSSYDRPVAHGQERLATASERDEMEAMLYEHDAIQKKSGLPSF

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
100 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
110 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
112 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
125 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
145 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
146 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 2.24
Rhizosphere 96.64
Stem 0
Stem Tuber 0
Unclassified 8.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10088296 3300009147 Bacteria 4298
2 Ga0065707_10004027 3300005295 Bacteria 3612
3 Ga0070670_100000188 3300005331 Bacteria 56512
4 Ga0068869_100014762 3300005334 Bacteria 5224
5 Ga0070680_100098300 3300005336 Bacteria 2427
6 Ga0068868_100105063 3300005338 Bacteria 2289
7 Ga0070669_100007712 3300005353 Bacteria 7695
8 Ga0070669_100064140 3300005353 Bacteria 2705
9 Ga0070709_10003012 3300005434 Bacteria 9058
10 Ga0070709_10014943 3300005434 Bacteria 4405
11 Ga0070709_10081188 3300005434 Bacteria 2116
12 Ga0070714_100001617 3300005435 Bacteria 16386
13 Ga0070714_100064440 3300005435 Bacteria 3154
14 Ga0070713_100006477 3300005436 Bacteria 8121
15 Ga0070711_100000076 3300005439 Bacteria 55974
16 Ga0070711_100010344 3300005439 Bacteria 5773
17 Ga0070711_100025705 3300005439 Bacteria 3854
18 Ga0070700_100002195 3300005441 Bacteria 9926
19 Ga0070700_100023906 3300005441 Bacteria 3580
20 Ga0070694_100000458 3300005444 Bacteria 22285
21 Ga0070694_100019399 3300005444 Bacteria 4323
22 Ga0070708_100035881 3300005445 Bacteria 4322
23 Ga0070708_100176928 3300005445 Bacteria 1994
24 Ga0070681_10134079 3300005458 Bacteria 2407
25 Ga0070685_10052442 3300005466 Bacteria 2360
26 Ga0070706_100000500 3300005467 Bacteria 45929
27 Ga0070706_100023773 3300005467 Bacteria 5641
28 Ga0070706_100070894 3300005467 Bacteria 3223
29 Ga0070707_100000037 3300005468 Bacteria 114708
30 Ga0070707_100009215 3300005468 Bacteria 9160
31 Ga0070707_100041286 3300005468 Bacteria 4415
32 Ga0070707_100086160 3300005468 Bacteria 3037
33 Ga0070707_100102677 3300005468 Unclassified 2771
34 Ga0070698_100001167 3300005471 Bacteria 29154
35 Ga0070698_100007722 3300005471 Bacteria 11633
36 Ga0070698_100084169 3300005471 Bacteria 3169
37 Ga0070699_100057262 3300005518 Bacteria 3376
38 Ga0070699_100060557 3300005518 Unclassified 3281
39 Ga0070679_100025280 3300005530 Bacteria 5825
40 Ga0070679_100134402 3300005530 Bacteria 2454
41 Ga0070684_100011784 3300005535 Bacteria 6976
42 Ga0070684_100029641 3300005535 Bacteria 4640
43 Ga0070697_100021455 3300005536 Bacteria 5117
44 Ga0068853_100081988 3300005539 Bacteria 2825
45 Ga0070696_100036001 3300005546 Bacteria 3410
46 Ga0070704_100002175 3300005549 Bacteria 10915
47 Ga0070704_100003454 3300005549 Bacteria 9063
48 Ga0068857_100144754 3300005577 Bacteria 2150
49 Ga0068854_100076455 3300005578 Bacteria 2461
50 Ga0068859_100009435 3300005617 Bacteria 9861
51 Ga0068859_100025809 3300005617 Bacteria 5895
52 Ga0068861_100005810 3300005719 Bacteria 8374
53 Ga0068861_100031206 3300005719 Bacteria 3912
54 Ga0068861_100035090 3300005719 Unclassified 3713
55 Ga0068858_100005742 3300005842 Bacteria 12126
56 Ga0068858_100141847 3300005842 Bacteria 2256
57 Ga0068858_100163025 3300005842 Bacteria 2100
58 Ga0068862_100007252 3300005844 Bacteria 9204
59 Ga0068862_100050464 3300005844 Bacteria 3556
60 Ga0068862_100077380 3300005844 Bacteria 2880
61 Ga0068862_100143396 3300005844 Bacteria 2121
62 Ga0081455_10004211 3300005937 Bacteria 16213
63 Ga0081455_10034482 3300005937 Bacteria 4533
64 Ga0070717_10002446 3300006028 Bacteria 13109
65 Ga0070717_10040020 3300006028 Bacteria 3816
66 Ga0070715_10021542 3300006163 Bacteria 2501
67 Ga0070716_100000002 3300006173 Bacteria 396037
68 Ga0070716_100014133 3300006173 Bacteria 4084
69 Ga0070716_100026347 3300006173 Unclassified 3113
70 Ga0070716_100055417 3300006173 Unclassified 2269
71 Ga0070712_100001387 3300006175 Bacteria 14707
72 Ga0070712_100004901 3300006175 Bacteria 8277
73 Ga0070712_100014380 3300006175 Bacteria 5080
74 Ga0097621_100104910 3300006237 Bacteria 2382
75 Ga0068871_100101367 3300006358 Bacteria 2413
76 Ga0075433_10134952 3300006852 Unclassified 2194
77 Ga0097620_100009435 3300006931 Bacteria 9861
78 Ga0097620_100025812 3300006931 Bacteria 5895
79 Ga0099794_10001010 3300007265 Bacteria 9523
80 Ga0105240_10008414 3300009093 Bacteria 14761
81 Ga0105240_10049966 3300009093 Bacteria 5275
82 Ga0105240_10094102 3300009093 Bacteria 3656
83 Ga0105240_10110499 3300009093 Bacteria 3327
84 Ga0111539_10017556 3300009094 Bacteria 8857
85 Ga0111539_10032550 3300009094 Bacteria 6331
86 Ga0111539_10094978 3300009094 Bacteria 3503
87 Ga0105245_10042627 3300009098 Bacteria 4049
88 Ga0114129_10010234 3300009147 Bacteria 13379
89 Ga0114129_10081013 3300009147 Bacteria 4512
90 Ga0114129_10113905 3300009147 Bacteria 3729
91 Ga0114129_10239588 3300009147 Bacteria 2439
92 Ga0105243_10000287 3300009148 Bacteria 55910
93 Ga0105243_10001044 3300009148 Bacteria 25379
94 Ga0105243_10075709 3300009148 Bacteria 2732
95 Ga0105241_10041669 3300009174 Bacteria 3470
96 Ga0105241_10111194 3300009174 Bacteria 2193
97 Ga0105242_10000022 3300009176 Bacteria 111855
98 Ga0105237_10029906 3300009545 Bacteria 5534
99 Ga0105238_10001343 3300009551 Bacteria 24717
100 Ga0105249_10046608 3300009553 Bacteria 3945
101 Ga0105239_10055598 3300010375 Bacteria 4341
102 Ga0105239_10222153 3300010375 Bacteria 2118
103 Ga0105246_10088397 3300011119 Bacteria 2226
104 Ga0157373_10038511 3300013100 Bacteria 3427
105 Ga0157370_10082776 3300013104 Bacteria 3018
106 Ga0157378_10000032 3300013297 Bacteria 122562
107 Ga0157378_10233616 3300013297 Unclassified 1753
108 Ga0163162_10003172 3300013306 Bacteria 15716
109 Ga0163162_10003898 3300013306 Bacteria 14324
110 Ga0163162_10065389 3300013306 Bacteria 3683
111 Ga0163162_10189977 3300013306 Bacteria 2181
112 Ga0157372_10054159 3300013307 Bacteria 4474
113 Ga0157372_10137916 3300013307 Bacteria 2810
114 Ga0157372_10217499 3300013307 Bacteria 2215
115 Ga0157372_10238429 3300013307 Bacteria 2110
116 Ga0157375_10009159 3300013308 Bacteria 8676
117 Ga0163163_10000550 3300014325 Bacteria 32856
118 Ga0163163_10061443 3300014325 Bacteria 3723
119 Ga0157379_10107214 3300014968 Unclassified 2508
120 Ga0157376_10060148 3300014969 Bacteria 3189
121 Ga0228598_1002064 3300024227 Bacteria 4383
122 Ga0207642_10039648 3300025899 Bacteria 2049
123 Ga0207684_10032596 3300025910 Bacteria 4429
124 Ga0207684_10040877 3300025910 Bacteria 3931
125 Ga0207684_10077368 3300025910 Bacteria 2829
126 Ga0207684_10182531 3300025910 Bacteria 1809
127 Ga0207707_10106975 3300025912 Bacteria 2445
128 Ga0207707_10121382 3300025912 Bacteria 2285
129 Ga0207695_10012864 3300025913 Bacteria 10017
130 Ga0207695_10020272 3300025913 Bacteria 7620
131 Ga0207695_10043983 3300025913 Bacteria 4755
132 Ga0207695_10046523 3300025913 Bacteria 4599
133 Ga0207671_10047002 3300025914 Bacteria 3194
134 Ga0207693_10000016 3300025915 Bacteria 145892
135 Ga0207693_10017380 3300025915 Bacteria 5738
136 Ga0207693_10034730 3300025915 Bacteria 3977
137 Ga0207663_10000272 3300025916 Bacteria 22428
138 Ga0207663_10007026 3300025916 Bacteria 5811
139 Ga0207646_10000106 3300025922 Bacteria 114093
140 Ga0207646_10005222 3300025922 Bacteria 13723
141 Ga0207646_10014519 3300025922 Bacteria 7475
142 Ga0207646_10016357 3300025922 Bacteria 6961
143 Ga0207694_10000999 3300025924 Bacteria 24718
144 Ga0207650_10000007 3300025925 Bacteria 530810
145 Ga0207700_10000132 3300025928 Bacteria 44689
146 Ga0207700_10121413 3300025928 Bacteria 2119
147 Ga0207664_10000440 3300025929 Bacteria 29677
148 Ga0207664_10020579 3300025929 Unclassified 4893
149 Ga0207664_10102828 3300025929 Bacteria 2363
150 Ga0207686_10000013 3300025934 Bacteria 204636
151 Ga0207686_10002446 3300025934 Bacteria 10086
152 Ga0207709_10000009 3300025935 Bacteria 619238
153 Ga0207704_10032821 3300025938 Bacteria 2944
154 Ga0207704_10057372 3300025938 Unclassified 2392
155 Ga0207665_10000007 3300025939 Bacteria 177869
156 Ga0207665_10001737 3300025939 Bacteria 14655
157 Ga0207665_10050830 3300025939 Unclassified 2789
158 Ga0207665_10052621 3300025939 Bacteria 2743
159 Ga0207711_10055210 3300025941 Bacteria 3411
160 Ga0207689_10004558 3300025942 Bacteria 12544
161 Ga0207689_10004578 3300025942 Bacteria 12521
162 Ga0207667_10175566 3300025949 Bacteria 2201
163 Ga0207677_10053453 3300026023 Bacteria 2749
164 Ga0207677_10053802 3300026023 Unclassified 2743
165 Ga0207703_10007402 3300026035 Bacteria 8721
166 Ga0207703_10134155 3300026035 Bacteria 2141
167 Ga0207703_10159389 3300026035 Bacteria 1975
168 Ga0207708_10008160 3300026075 Bacteria 7754
169 Ga0207708_10030340 3300026075 Bacteria 4099
170 Ga0207648_10098669 3300026089 Bacteria 2558
171 Ga0207674_10136833 3300026116 Bacteria 2411
172 Ga0207675_100000607 3300026118 Bacteria 34962
173 Ga0207675_100108986 3300026118 Bacteria 2612
174 Ga0207698_10143393 3300026142 Bacteria 2062
175 Ga0207428_10016140 3300027907 Bacteria 6432
176 Ga0207428_10019776 3300027907 Bacteria 5735
177 Ga0265356_1001435 3300028017 Bacteria 3545
178 Ga0268265_10157458 3300028380 Bacteria 1924
179 Ga0265323_10000267 3300028653 Bacteria 30586
180 Ga0265338_10006291 3300028800 Bacteria 15177
181 Ga0265338_10109367 3300028800 Bacteria 2230
182 Ga0265762_1000743 3300030760 Bacteria 5804
183 Ga0265760_10000399 3300031090 Bacteria 12181
184 Ga0265330_10031871 3300031235 Bacteria 2363
185 Ga0265325_10060634 3300031241 Unclassified 1921
186 Ga0265339_10013101 3300031249 Bacteria 5036
187 Ga0265339_10017087 3300031249 Bacteria 4302
188 Ga0265331_10001560 3300031250 Bacteria 16791
189 Ga0265316_10000818 3300031344 Bacteria 34391
190 Ga0265316_10004736 3300031344 Bacteria 13460
191 Ga0265316_10005361 3300031344 Bacteria 12488
192 Ga0265316_10017138 3300031344 Bacteria 6270
193 Ga0265316_10017962 3300031344 Bacteria 6095
194 Ga0265316_10018593 3300031344 Bacteria 5968
195 Ga0265316_10049148 3300031344 Bacteria 3323
196 Ga0307513_10027848 3300031456 Bacteria 6476
197 Ga0265314_10014419 3300031711 Bacteria 6324
198 Ga0265314_10016975 3300031711 Bacteria 5729
199 Ga0265314_10022316 3300031711 Bacteria 4850
200 Ga0265314_10022760 3300031711 Bacteria 4796
201 Ga0265314_10033745 3300031711 Bacteria 3746
202 Ga0265342_10014402 3300031712 Bacteria 5251
203 Ga0265342_10054617 3300031712 Bacteria 2373
204 Ga0307412_10010639 3300031911 Bacteria 5302
205 Ga0307416_100092258 3300032002 Bacteria 2604
206 Ga0307414_10033075 3300032004 Bacteria 3414
207 Ga0307415_100064765 3300032126 Bacteria 2544
208 Ga0373926_0007953 3300035083 Bacteria 3532
209 Ga0373923_0011377 3300035111 Unclassified 3261
210 Ga0373936_0000945 3300035113 Bacteria 10372
211 Ga0373936_0005045 3300035113 Bacteria 4968
212 Ga0373945_0015141 3300035116 Unclassified 2592
213 Ga0373956_0004421 3300035119 Bacteria 5625
214 Ga0373943_0000241 3300035170 Bacteria 22571
215 Ga0373946_0011340 3300035171 Unclassified 3323
216 Ga0373955_0005716 3300035172 Bacteria 5601
217 Ga0373935_0004680 3300035692 Bacteria 8049
218 Ga0373935_0006061 3300035692 Bacteria 7186
219 Ga0373927_0000016 3300035695 Bacteria 154151
220 Ga0373947_0000042 3300035725 Bacteria 62180
221 Ga0373947_0030366 3300035725 Bacteria 3175
222 Ga0373937_0071071 3300036401 Unclassified 3210
223 Ga0373937_0135629 3300036401 Bacteria 2301
224 Ga0373937_0146920 3300036401 Bacteria 2207
225 Ga0373925_0000744 3300037068 Bacteria 29911
226 Ga0373925_0005005 3300037068 Bacteria 9946
227 Ga0373925_0067865 3300037068 Bacteria 2691
228 Ga0395905_0003499 3300037471 Bacteria 16753
229 Ga0436365_0134757 3300039437 Bacteria 2817
230 Ga0439455_0009109 3300042012 Bacteria 2146
231 Ga0495629_0006597 3300046459 Bacteria 8594
232 Ga0495580_0000243 3300046472 Bacteria 43209
233 Ga0495580_0057404 3300046472 Bacteria 2740
234 Ga0495580_0106997 3300046472 Unclassified 1942
235 Ga0495582_0002738 3300046473 Bacteria 9843
236 Ga0495664_0032957 3300046477 Unclassified 3043
237 Ga0495630_0023298 3300046517 Bacteria 4577
238 Ga0495630_0072362 3300046517 Unclassified 2595
239 Ga0495652_0041559 3300046529 Bacteria 3968
240 Ga0495621_0015585 3300046539 Unclassified 2426
241 Ga0495645_0010652 3300046543 Bacteria 6454
242 Ga0495646_0035407 3300046680 Bacteria 3097
243 Ga0495658_0028996 3300046683 Bacteria 2991
244 Ga0495604_0028099 3300047317 Bacteria 4475
245 Ga0495674_0016099 3300047319 Bacteria 6979
246 Ga0495674_0030151 3300047319 Bacteria 4934
247 Ga0495680_0009552 3300047322 Bacteria 8714
248 Ga0495675_0018254 3300047444 Bacteria 4452
249 Ga0495675_0039904 3300047444 Bacteria 2991
250 Ga0496104_0136828 3300048907 Bacteria 2353
251 Ga0496105_0020558 3300048908 Bacteria 5336
252 Ga0496106_0009221 3300048909 Bacteria 7289
253 Ga0496109_0000027 3300048912 Bacteria 169870
254 Ga0496112_0018151 3300048915 Bacteria 6620
255 Ga0496112_0028394 3300048915 Bacteria 5400
256 Ga0501202_006150 3300049652 Unclassified 2142
257 Ga0501216_000366 3300049660 Bacteria 5201
258 Ga0501261_002137 3300049690 Bacteria 2425
259 nmdc:mga05p37_31562_c1 3300050507 Bacteria 6471
260 nmdc:mga05p37_63171_c1 3300050507 Bacteria 4557
261 nmdc:mga05p37_68300_c1 3300050507 Bacteria 4370
262 nmdc:mga08y16_12061_c1 3300050511 Bacteria 9081
263 nmdc:mga08y16_21425_c1 3300050511 Bacteria 6826
264 nmdc:mga08y16_70732_c1 3300050511 Bacteria 3637
265 nmdc:mga0n895_148420_c1 3300050512 Bacteria 2374
266 nmdc:mga0a205_246822_c1 3300050515 Bacteria 1665
267 Ga0500577_0003574 3300053142 Bacteria 4043
268 Ga0501082_0000185 3300060353 Bacteria 54029
269 Ga0114129_10088296
270 Ga0065707_10004027
271 Ga0070670_100000188
272 Ga0068869_100014762
273 Ga0070680_100098300
274 Ga0068868_100105063
275 Ga0070669_100007712
276 Ga0070669_100064140
277 Ga0070709_10003012
278 Ga0070709_10014943
279 Ga0070709_10081188
280 Ga0070714_100001617
281 Ga0070714_100064440
282 Ga0070713_100006477
283 Ga0070711_100000076
284 Ga0070711_100010344
285 Ga0070711_100025705
286 Ga0070700_100002195
287 Ga0070700_100023906
288 Ga0070694_100000458
289 Ga0070694_100019399
290 Ga0070708_100035881
291 Ga0070708_100176928
292 Ga0070681_10134079
293 Ga0070685_10052442
294 Ga0070706_100000500
295 Ga0070706_100023773
296 Ga0070706_100070894
297 Ga0070707_100000037
298 Ga0070707_100009215
299 Ga0070707_100041286
300 Ga0070707_100086160
301 Ga0070707_100102677
302 Ga0070698_100001167
303 Ga0070698_100007722
304 Ga0070698_100084169
305 Ga0070699_100057262
306 Ga0070699_100060557
307 Ga0070679_100025280
308 Ga0070679_100134402
309 Ga0070684_100011784
310 Ga0070684_100029641
311 Ga0070697_100021455
312 Ga0068853_100081988
313 Ga0070696_100036001
314 Ga0070704_100002175
315 Ga0070704_100003454
316 Ga0068857_100144754
317 Ga0068854_100076455
318 Ga0068859_100009435
319 Ga0068859_100025809
320 Ga0068861_100005810
321 Ga0068861_100031206
322 Ga0068861_100035090
323 Ga0068858_100005742
324 Ga0068858_100141847
325 Ga0068858_100163025
326 Ga0068862_100007252
327 Ga0068862_100050464
328 Ga0068862_100077380
329 Ga0068862_100143396
330 Ga0081455_10004211
331 Ga0081455_10034482
332 Ga0070717_10002446
333 Ga0070717_10040020
334 Ga0070715_10021542
335 Ga0070716_100000002
336 Ga0070716_100014133
337 Ga0070716_100026347
338 Ga0070716_100055417
339 Ga0070712_100001387
340 Ga0070712_100004901
341 Ga0070712_100014380
342 Ga0097621_100104910
343 Ga0068871_100101367
344 Ga0075433_10134952
345 Ga0097620_100009435
346 Ga0097620_100025812
347 Ga0099794_10001010
348 Ga0105240_10008414
349 Ga0105240_10049966
350 Ga0105240_10094102
351 Ga0105240_10110499
352 Ga0111539_10017556
353 Ga0111539_10032550
354 Ga0111539_10094978
355 Ga0105245_10042627
356 Ga0114129_10010234
357 Ga0114129_10081013
358 Ga0114129_10113905
359 Ga0114129_10239588
360 Ga0105243_10000287
361 Ga0105243_10001044
362 Ga0105243_10075709
363 Ga0105241_10041669
364 Ga0105241_10111194
365 Ga0105242_10000022
366 Ga0105237_10029906
367 Ga0105238_10001343
368 Ga0105249_10046608
369 Ga0105239_10055598
370 Ga0105239_10222153
371 Ga0105246_10088397
372 Ga0157373_10038511
373 Ga0157370_10082776
374 Ga0157378_10000032
375 Ga0157378_10233616
376 Ga0163162_10003172
377 Ga0163162_10003898
378 Ga0163162_10065389
379 Ga0163162_10189977
380 Ga0157372_10054159
381 Ga0157372_10137916
382 Ga0157372_10217499
383 Ga0157372_10238429
384 Ga0157375_10009159
385 Ga0163163_10000550
386 Ga0163163_10061443
387 Ga0157379_10107214
388 Ga0157376_10060148
389 Ga0228598_1002064
390 Ga0207642_10039648
391 Ga0207684_10032596
392 Ga0207684_10040877
393 Ga0207684_10077368
394 Ga0207684_10182531
395 Ga0207707_10106975
396 Ga0207707_10121382
397 Ga0207695_10012864
398 Ga0207695_10020272
399 Ga0207695_10043983
400 Ga0207695_10046523
401 Ga0207671_10047002
402 Ga0207693_10000016
403 Ga0207693_10017380
404 Ga0207693_10034730
405 Ga0207663_10000272
406 Ga0207663_10007026
407 Ga0207646_10000106
408 Ga0207646_10005222
409 Ga0207646_10014519
410 Ga0207646_10016357
411 Ga0207694_10000999
412 Ga0207650_10000007
413 Ga0207700_10000132
414 Ga0207700_10121413
415 Ga0207664_10000440
416 Ga0207664_10020579
417 Ga0207664_10102828
418 Ga0207686_10000013
419 Ga0207686_10002446
420 Ga0207709_10000009
421 Ga0207704_10032821
422 Ga0207704_10057372
423 Ga0207665_10000007
424 Ga0207665_10001737
425 Ga0207665_10050830
426 Ga0207665_10052621
427 Ga0207711_10055210
428 Ga0207689_10004558
429 Ga0207689_10004578
430 Ga0207667_10175566
431 Ga0207677_10053453
432 Ga0207677_10053802
433 Ga0207703_10007402
434 Ga0207703_10134155
435 Ga0207703_10159389
436 Ga0207708_10008160
437 Ga0207708_10030340
438 Ga0207648_10098669
439 Ga0207674_10136833
440 Ga0207675_100000607
441 Ga0207675_100108986
442 Ga0207698_10143393
443 Ga0207428_10016140
444 Ga0207428_10019776
445 Ga0265356_1001435
446 Ga0268265_10157458
447 Ga0265323_10000267
448 Ga0265338_10006291
449 Ga0265338_10109367
450 Ga0265762_1000743
451 Ga0265760_10000399
452 Ga0265330_10031871
453 Ga0265325_10060634
454 Ga0265339_10013101
455 Ga0265339_10017087
456 Ga0265331_10001560
457 Ga0265316_10000818
458 Ga0265316_10004736
459 Ga0265316_10005361
460 Ga0265316_10017138
461 Ga0265316_10017962
462 Ga0265316_10018593
463 Ga0265316_10049148
464 Ga0307513_10027848
465 Ga0265314_10014419
466 Ga0265314_10016975
467 Ga0265314_10022316
468 Ga0265314_10022760
469 Ga0265314_10033745
470 Ga0265342_10014402
471 Ga0265342_10054617
472 Ga0307412_10010639
473 Ga0307416_100092258
474 Ga0307414_10033075
475 Ga0307415_100064765
476 Ga0373926_0007953
477 Ga0373923_0011377
478 Ga0373936_0000945
479 Ga0373936_0005045
480 Ga0373945_0015141
481 Ga0373956_0004421
482 Ga0373943_0000241
483 Ga0373946_0011340
484 Ga0373955_0005716
485 Ga0373935_0004680
486 Ga0373935_0006061
487 Ga0373927_0000016
488 Ga0373947_0000042
489 Ga0373947_0030366
490 Ga0373937_0071071
491 Ga0373937_0135629
492 Ga0373937_0146920
493 Ga0373925_0000744
494 Ga0373925_0005005
495 Ga0373925_0067865
496 Ga0395905_0003499
497 Ga0436365_0134757
498 Ga0439455_0009109
499 Ga0495629_0006597
500 Ga0495580_0000243
501 Ga0495580_0057404
502 Ga0495580_0106997
503 Ga0495582_0002738
504 Ga0495664_0032957
505 Ga0495630_0023298
506 Ga0495630_0072362
507 Ga0495652_0041559
508 Ga0495621_0015585
509 Ga0495645_0010652
510 Ga0495646_0035407
511 Ga0495658_0028996
512 Ga0495604_0028099
513 Ga0495674_0016099
514 Ga0495674_0030151
515 Ga0495680_0009552
516 Ga0495675_0018254
517 Ga0495675_0039904
518 Ga0496104_0136828
519 Ga0496105_0020558
520 Ga0496106_0009221
521 Ga0496109_0000027
522 Ga0496112_0018151
523 Ga0496112_0028394
524 Ga0501202_006150
525 Ga0501216_000366
526 Ga0501261_002137
527 nmdc:mga05p37_31562_c1
528 nmdc:mga05p37_63171_c1
529 nmdc:mga05p37_68300_c1
530 nmdc:mga08y16_12061_c1
531 nmdc:mga08y16_21425_c1
532 nmdc:mga08y16_70732_c1
533 nmdc:mga0n895_148420_c1
534 nmdc:mga0a205_246822_c1
535 Ga0500577_0003574
536 Ga0501082_0000185

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02310

B12-binding

B12 binding domain

8

128

0.93

PF04055

Radical_SAM

Radical SAM superfamily

196

365

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.738 2 441
6wte-assembly1.cif.gz_A structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with cobalamin and [4fe-4s] cluster bound 0.7345 2 393
6wtf-assembly1.cif.gz_A structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with tryptophan substrate and sam analog (aza-sam) bound 0.7164 2 393
6fd2-assembly1.cif.gz_B radical sam 1,2-diol dehydratase aprd4 in complex with its substrate paromamine 0.7129 2 474
6wte-assembly2.cif.gz_B structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with cobalamin and [4fe-4s] cluster bound 0.7118 2 398
ID Description Score Start End Superfamily
af_A4HWS3_271_391_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8621 278 355 3.80.30.20
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.7993 195 399 3.80.30.20
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.7554 195 399 3.80.30.20
af_F1LV76_14_128_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.7553 304 429 3.30.750.200
4jc0B03 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.7441 304 444 3.30.750.200
ID Description Score Start End GO Terms
AF-A0A2V8Q903-F1-model_v4 B12-binding domain-containing protein 0.9726 18 145 GO:0005829
GO:0031419
GO:0046872
GO:0051536
AF-A0A7W1JCV2-F1-model_v4 Cobalamin B12-binding domain-containing protein 0.9548 1 138 GO:0005829
GO:0031419
GO:0046872
GO:0051536
AF-A0A7W1JCV2-F1-model_v4 Cobalamin B12-binding domain-containing protein 0.948 1 138 GO:0005829
GO:0031419
GO:0046872
GO:0051536
AF-A0A353C7I4-F1-model_v4 Radical SAM core domain-containing protein 0.9457 191 396 GO:0003824
GO:0005829
GO:0051539
AF-A0A3E0PJZ0-F1-model_v4 Radical SAM protein 0.9429 1 514 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051539

Map