F375408
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 268 | 183 | 536 | 369 |
Family's Representative Sequence
| Representative Sequence | 3300006844|Ga0075428_100172823|Ga0075428_1001728233 |
| Length | 405 |
| Sequence | VPHRHRKCEVVSEAAHSDTGTQASAACARAPLGLLAELTHRCPLQCPYCSNPLELESAGAELDTATWQDVLRQAARLGVLQLHLSGGEPTVRRDLEDLVATAVETGLYTNLITAGVLLTRKRLEALAGRGLEHVQLSIQDVEPANADRIAHYAGAHARKREVARWVRELGLALTINAPVHRQNLDRIEGIIDFAVEVGARRLEVAHVQYYGWALGNLAALMPTRAQVARSVEIVDAARERLKGILVIDFVVPDYYATWPKPCMGGWGRGIINVTPSGKVLPCHAAETIPGLCFDNVRDKPLAEIWLRGQAFEKFRGTEWMLEPCRSCERREIDWGGCRCQAFAVTGNAAAADPACVKSSRHGELVALAERETASLPPEFVYRRPLRRGPLPATDGAVGRGKVNSP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 2 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 3 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 4 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 5 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 18 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 19 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 20 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 21 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 22 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 23 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 24 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 25 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 26 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 27 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 28 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 39 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 54 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 58 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 59 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 60 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 61 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 62 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 63 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 64 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 65 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 66 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 67 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 68 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 69 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 70 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 71 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 72 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 73 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 74 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 77 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 78 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 79 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 80 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 81 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 82 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 83 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 84 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 85 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 87 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 88 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 90 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 91 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 93 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 94 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 95 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 96 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 97 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 98 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 102 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 108 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 109 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 110 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 111 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 112 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 113 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 117 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 118 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 119 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 122 | 2508501127 | Mesorhizobium sp. WSM2561 | Isolate | Nodule |
| 123 | 2599185170 | Rhizobium mongolense USDA 1844 (PacBio) | Isolate | Nodule |
| 124 | 2693429783 | Mesorhizobium sp. LCM 4577 | Isolate | Rhizosphere |
| 125 | 2693429784 | Mesorhizobium sp. LCM 4576 | Isolate | Rhizosphere |
| 126 | 2838035591 | Rhizobium mongolense SEMIA 4087 | Isolate | Nodule |
| 127 | 2838661181 | Rhizobium mongolense SEMIA 402 | Isolate | Nodule |
| 128 | 2841734538 | Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 | Isolate | Nodule |
| 129 | 2847686936 | Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 | Isolate | Nodule |
| 130 | 2856342000 | Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 | Isolate | Nodule |
| 131 | 2857349434 | Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 | Isolate | Nodule |
| 132 | 2871474448 | Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 | Isolate | Nodule |
| 133 | 2871495908 | Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 | Isolate | Nodule |
| 134 | 2874102143 | Mesorhizobium sp. M1A.F.Ca.IN.022.04.1.1 | Isolate | Nodule |
| 135 | 2876377896 | Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 | Isolate | Nodule |
| 136 | 2878760144 | Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 | Isolate | Nodule |
| 137 | 2878767105 | Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 | Isolate | Nodule |
| 138 | 2878788777 | Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 | Isolate | Nodule |
| 139 | 2885326080 | Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 | Isolate | Nodule |
| 140 | 2888343758 | Mesorhizobium sp. AA22 | Isolate | Unclassified |
| 141 | 2888350351 | Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 | Isolate | Nodule |
| 142 | 2889010040 | Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 | Isolate | Nodule |
| 143 | 2889016732 | Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 | Isolate | Nodule |
| 144 | 2903540706 | Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 | Isolate | Nodule |
| 145 | 2906354277 | Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 | Isolate | Nodule |
| 146 | 2922185730 | Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 | Isolate | Nodule |
| 147 | 2924754689 | Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 | Isolate | Nodule |
| 148 | 2937836603 | Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 | Isolate | Nodule |
| 149 | 2937891427 | Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 | Isolate | Nodule |
| 150 | 2937994558 | Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 | Isolate | Nodule |
| 151 | 2938014810 | Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 | Isolate | Nodule |
| 152 | 2958071322 | Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 | Isolate | Nodule |
| 153 | 2958100919 | Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 | Isolate | Nodule |
| 154 | 2958115193 | Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 | Isolate | Nodule |
| 155 | 2958165035 | Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 | Isolate | Nodule |
| 156 | 2958172287 | Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 | Isolate | Nodule |
| 157 | 2961163497 | Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 | Isolate | Nodule |
| 158 | 2965018300 | Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 | Isolate | Nodule |
| 159 | 2965062239 | Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 | Isolate | Nodule |
| 160 | 2965119406 | Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 | Isolate | Nodule |
| 161 | 2968091066 | Mesorhizobium sp. AA23 | Isolate | Unclassified |
| 162 | 2968097103 | Mesorhizobium sp. M1A.F.Ca.IN.020.30.1.1 | Isolate | Nodule |
| 163 | 2968128360 | Mesorhizobium sp. WSM3873 | Isolate | Unclassified |
| 164 | 2968171901 | Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 | Isolate | Nodule |
| 165 | 2970524798 | Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 | Isolate | Nodule |
| 166 | 2970540015 | Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 | Isolate | Nodule |
| 167 | 2970554993 | Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 | Isolate | Nodule |
| 168 | 2977942078 | Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 | Isolate | Nodule |
| 169 | 2977971508 | Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 | Isolate | Nodule |
| 170 | 2979710463 | Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 | Isolate | Nodule |
| 171 | 2979742915 | Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 | Isolate | Nodule |
| 172 | 2979779861 | Mesorhizobium sp. M1A.F.Ca.IN.022.02.1.1 | Isolate | Nodule |
| 173 | 2987636660 | Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 | Isolate | Nodule |
| 174 | 2987659509 | Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 | Isolate | Nodule |
| 175 | 2996336353 | Mesorhizobium sp. YM1C-6-2 | Isolate | Unclassified |
| 176 | 3000405567 | Rhodobacteraceae bacterium LNNU 3342 | Isolate | Rhizosphere |
| 177 | 3004188549 | Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 | Isolate | Nodule |
| 178 | 3004203850 | Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 | Isolate | Nodule |
| 179 | 641228493 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 180 | 8004395343 | Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 | Isolate | Nodule |
| 181 | 8004633249 | Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 | Isolate | Nodule |
| 182 | 8004703790 | Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 | Isolate | Nodule |
| 183 | 8055617313 | Mesorhizobium onobrychidis OM4 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 76.87 |
| Metatranscriptomes | 0 |
| Isolates | 23.13 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.12 |
| Nodule | 20.15 |
| Rhizoplane | 2.24 |
| Rhizosphere | 70.9 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.87 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0075428_100172823 | 3300006844 | Bacteria | 2341 |
| 2 | Ga0070680_100002609 | 3300005336 | Bacteria | 13344 |
| 3 | Ga0070691_10045669 | 3300005341 | Bacteria | 2079 |
| 4 | Ga0070703_10006284 | 3300005406 | Bacteria | 3328 |
| 5 | Ga0070701_10010374 | 3300005438 | Bacteria | 4118 |
| 6 | Ga0070705_100000950 | 3300005440 | Bacteria | 16216 |
| 7 | Ga0070700_100002600 | 3300005441 | Bacteria | 9234 |
| 8 | Ga0070694_100101206 | 3300005444 | Bacteria | 2039 |
| 9 | Ga0070708_100074408 | 3300005445 | Bacteria | 3064 |
| 10 | Ga0070681_10011979 | 3300005458 | Bacteria | 8597 |
| 11 | Ga0070707_100035847 | 3300005468 | Bacteria | 4733 |
| 12 | Ga0070699_100000958 | 3300005518 | Bacteria | 26920 |
| 13 | Ga0070695_100000397 | 3300005545 | Bacteria | 22586 |
| 14 | Ga0070695_100062557 | 3300005545 | Bacteria | 2417 |
| 15 | Ga0070696_100000229 | 3300005546 | Bacteria | 33893 |
| 16 | Ga0070665_100000913 | 3300005548 | Bacteria | 37936 |
| 17 | Ga0070665_100293710 | 3300005548 | Bacteria | 1627 |
| 18 | Ga0070704_100001299 | 3300005549 | Bacteria | 13207 |
| 19 | Ga0068857_100001246 | 3300005577 | Bacteria | 19897 |
| 20 | Ga0068859_100003426 | 3300005617 | Bacteria | 16126 |
| 21 | Ga0068860_100004306 | 3300005843 | Bacteria | 14550 |
| 22 | Ga0068860_100148073 | 3300005843 | Bacteria | 2260 |
| 23 | Ga0068862_100004070 | 3300005844 | Bacteria | 12399 |
| 24 | Ga0081455_10000209 | 3300005937 | Bacteria | 74597 |
| 25 | Ga0081455_10086298 | 3300005937 | Bacteria | 2557 |
| 26 | Ga0081538_10014368 | 3300005981 | Bacteria | 6202 |
| 27 | Ga0081538_10015648 | 3300005981 | Bacteria | 5861 |
| 28 | Ga0075428_100292393 | 3300006844 | Bacteria | 1752 |
| 29 | Ga0075430_100046323 | 3300006846 | Bacteria | 3673 |
| 30 | Ga0075431_100000333 | 3300006847 | Bacteria | 37182 |
| 31 | Ga0075431_100003698 | 3300006847 | Bacteria | 14862 |
| 32 | Ga0075431_100007917 | 3300006847 | Bacteria | 10591 |
| 33 | Ga0075431_100065627 | 3300006847 | Bacteria | 3748 |
| 34 | Ga0075434_100003619 | 3300006871 | Bacteria | 13794 |
| 35 | Ga0075429_100015560 | 3300006880 | Bacteria | 6591 |
| 36 | Ga0075429_100038291 | 3300006880 | Bacteria | 4174 |
| 37 | Ga0075429_100094820 | 3300006880 | Bacteria | 2602 |
| 38 | Ga0075436_100006111 | 3300006914 | Bacteria | 8264 |
| 39 | Ga0097620_100003426 | 3300006931 | Bacteria | 16126 |
| 40 | Ga0105240_10451216 | 3300009093 | Bacteria | 1439 |
| 41 | Ga0111539_10030253 | 3300009094 | Bacteria | 6584 |
| 42 | Ga0114129_10027925 | 3300009147 | Bacteria | 7991 |
| 43 | Ga0114129_10299782 | 3300009147 | Bacteria | 2143 |
| 44 | Ga0114129_10385440 | 3300009147 | Bacteria | 1850 |
| 45 | Ga0105237_10037676 | 3300009545 | Bacteria | 4886 |
| 46 | Ga0105238_10000852 | 3300009551 | Bacteria | 31428 |
| 47 | Ga0105238_10007469 | 3300009551 | Bacteria | 10949 |
| 48 | Ga0105249_10013768 | 3300009553 | Bacteria | 7145 |
| 49 | Ga0105239_10039767 | 3300010375 | Bacteria | 5153 |
| 50 | Ga0105239_10166567 | 3300010375 | Bacteria | 2464 |
| 51 | Ga0105246_10053527 | 3300011119 | Bacteria | 2777 |
| 52 | Ga0157370_10011654 | 3300013104 | Bacteria | 9179 |
| 53 | Ga0213875_10005161 | 3300021388 | Bacteria | 7063 |
| 54 | Ga0213875_10006825 | 3300021388 | Bacteria | 5959 |
| 55 | Ga0207653_10003265 | 3300025885 | Bacteria | 5118 |
| 56 | Ga0207647_10000883 | 3300025904 | Bacteria | 23261 |
| 57 | Ga0207707_10159454 | 3300025912 | Bacteria | 1973 |
| 58 | Ga0207707_10270628 | 3300025912 | Bacteria | 1472 |
| 59 | Ga0207695_10037850 | 3300025913 | Bacteria | 5202 |
| 60 | Ga0207695_10118147 | 3300025913 | Bacteria | 2623 |
| 61 | Ga0207660_10003943 | 3300025917 | Bacteria | 9668 |
| 62 | Ga0207652_10044696 | 3300025921 | Bacteria | 3774 |
| 63 | Ga0207694_10000713 | 3300025924 | Bacteria | 29856 |
| 64 | Ga0207706_10053782 | 3300025933 | Bacteria | 3554 |
| 65 | Ga0207709_10022599 | 3300025935 | Bacteria | 3568 |
| 66 | Ga0207689_10044421 | 3300025942 | Bacteria | 3674 |
| 67 | Ga0207712_10009621 | 3300025961 | Bacteria | 6122 |
| 68 | Ga0207708_10000819 | 3300026075 | Bacteria | 23412 |
| 69 | Ga0207674_10000240 | 3300026116 | Bacteria | 68544 |
| 70 | Ga0207683_10183288 | 3300026121 | Bacteria | 1899 |
| 71 | Ga0207428_10011892 | 3300027907 | Bacteria | 7664 |
| 72 | Ga0268266_10000346 | 3300028379 | Bacteria | 72336 |
| 73 | Ga0268266_10039584 | 3300028379 | Bacteria | 4016 |
| 74 | Ga0268265_10008947 | 3300028380 | Bacteria | 6772 |
| 75 | Ga0268264_10003036 | 3300028381 | Bacteria | 14555 |
| 76 | Ga0265327_10000163 | 3300031251 | Bacteria | 143328 |
| 77 | Ga0373940_0006514 | 3300035088 | Bacteria | 2593 |
| 78 | Ga0373949_0003621 | 3300035090 | Bacteria | 3632 |
| 79 | Ga0373932_0017087 | 3300035112 | Bacteria | 1858 |
| 80 | Ga0373939_0001108 | 3300035114 | Bacteria | 6629 |
| 81 | Ga0373941_0005024 | 3300035115 | Bacteria | 3085 |
| 82 | Ga0373961_0002588 | 3300035241 | Bacteria | 4656 |
| 83 | Ga0373961_0005157 | 3300035241 | Bacteria | 3142 |
| 84 | Ga0373962_0006009 | 3300035242 | Bacteria | 2930 |
| 85 | Ga0373931_0000562 | 3300035691 | Bacteria | 15314 |
| 86 | Ga0373931_0001385 | 3300035691 | Bacteria | 10380 |
| 87 | Ga0395899_0078390 | 3300037312 | Bacteria | 2408 |
| 88 | Ga0395900_0318225 | 3300037418 | Bacteria | 1537 |
| 89 | Ga0395905_0235315 | 3300037471 | Bacteria | 1712 |
| 90 | Ga0436364_0048841 | 3300037853 | Bacteria | 9354 |
| 91 | Ga0436364_0467718 | 3300037853 | Bacteria | 3604 |
| 92 | Ga0436364_0714857 | 3300037853 | Bacteria | 42197 |
| 93 | Ga0395901_0340960 | 3300038443 | Bacteria | 1548 |
| 94 | Ga0400483_058845 | 3300039062 | Bacteria | 8318 |
| 95 | Ga0400483_090797 | 3300039062 | Bacteria | 8891 |
| 96 | Ga0400483_229753 | 3300039062 | Bacteria | 10919 |
| 97 | Ga0400483_247651 | 3300039062 | Bacteria | 6152 |
| 98 | Ga0400483_285366 | 3300039062 | Bacteria | 9275 |
| 99 | Ga0466972_0102900 | 3300044658 | Bacteria | 1351 |
| 100 | Ga0451576_0092806 | 3300045051 | Bacteria | 3140 |
| 101 | Ga0495606_0047145 | 3300046507 | Bacteria | 2843 |
| 102 | Ga0495609_0016955 | 3300046538 | Bacteria | 3389 |
| 103 | Ga0496101_0064116 | 3300048904 | Bacteria | 2676 |
| 104 | Ga0496102_0046170 | 3300048905 | Bacteria | 3955 |
| 105 | Ga0496104_0129586 | 3300048907 | Bacteria | 2423 |
| 106 | Ga0496106_0011308 | 3300048909 | Bacteria | 6606 |
| 107 | Ga0496107_0010302 | 3300048910 | Bacteria | 6492 |
| 108 | Ga0496110_0285592 | 3300048913 | Bacteria | 1503 |
| 109 | Ga0501031_0011676 | 3300049568 | Bacteria | 5729 |
| 110 | Ga0501031_0137727 | 3300049568 | Bacteria | 1595 |
| 111 | Ga0501032_0100936 | 3300049569 | Unclassified | 1912 |
| 112 | Ga0501033_0041629 | 3300049570 | Bacteria | 3427 |
| 113 | Ga0501034_0016437 | 3300049571 | Bacteria | 7594 |
| 114 | Ga0501036_0044288 | 3300049572 | Bacteria | 3769 |
| 115 | Ga0501037_0155702 | 3300049573 | Bacteria | 1631 |
| 116 | Ga0501038_0087854 | 3300049574 | Bacteria | 2610 |
| 117 | Ga0501039_0011052 | 3300049575 | Bacteria | 6881 |
| 118 | Ga0501040_0006408 | 3300049576 | Bacteria | 7643 |
| 119 | Ga0501040_0007659 | 3300049576 | Bacteria | 6989 |
| 120 | Ga0501041_0037972 | 3300049577 | Bacteria | 2920 |
| 121 | Ga0501041_0065932 | 3300049577 | Bacteria | 2218 |
| 122 | Ga0501042_0003843 | 3300049578 | Bacteria | 9496 |
| 123 | Ga0501042_0148111 | 3300049578 | Unclassified | 1692 |
| 124 | Ga0501046_0233828 | 3300049580 | Bacteria | 1357 |
| 125 | Ga0501048_0007571 | 3300049582 | Bacteria | 8233 |
| 126 | Ga0501048_0007618 | 3300049582 | Bacteria | 8205 |
| 127 | Ga0501048_0062283 | 3300049582 | Bacteria | 2641 |
| 128 | Ga0501048_0136475 | 3300049582 | Bacteria | 1734 |
| 129 | Ga0501068_0139313 | 3300049584 | Bacteria | 1520 |
| 130 | Ga0501071_0010269 | 3300049587 | Bacteria | 6268 |
| 131 | Ga0501071_0017086 | 3300049587 | Bacteria | 4999 |
| 132 | Ga0501071_0025575 | 3300049587 | Bacteria | 4137 |
| 133 | Ga0501071_0117185 | 3300049587 | Bacteria | 1972 |
| 134 | Ga0501071_0118924 | 3300049587 | Bacteria | 1958 |
| 135 | Ga0501071_0236397 | 3300049587 | Bacteria | 1377 |
| 136 | Ga0501072_0005802 | 3300049588 | Bacteria | 9403 |
| 137 | Ga0501072_0019696 | 3300049588 | Bacteria | 5219 |
| 138 | Ga0501072_0022284 | 3300049588 | Bacteria | 4914 |
| 139 | Ga0501074_0007851 | 3300049590 | Bacteria | 7729 |
| 140 | Ga0501074_0019032 | 3300049590 | Bacteria | 4987 |
| 141 | Ga0501074_0138583 | 3300049590 | Unclassified | 1740 |
| 142 | Ga0501075_0004507 | 3300049591 | Bacteria | 9431 |
| 143 | Ga0501075_0015476 | 3300049591 | Bacteria | 5475 |
| 144 | Ga0501075_0096294 | 3300049591 | Bacteria | 2246 |
| 145 | Ga0501076_0000914 | 3300049592 | Bacteria | 19255 |
| 146 | Ga0501076_0020421 | 3300049592 | Bacteria | 5071 |
| 147 | Ga0501076_0041743 | 3300049592 | Bacteria | 3610 |
| 148 | Ga0501076_0052570 | 3300049592 | Unclassified | 3227 |
| 149 | Ga0501076_0155461 | 3300049592 | Bacteria | 1861 |
| 150 | Ga0501077_0015102 | 3300049593 | Bacteria | 4856 |
| 151 | Ga0501077_0019442 | 3300049593 | Bacteria | 4296 |
| 152 | Ga0501077_0030928 | 3300049593 | Bacteria | 3406 |
| 153 | Ga0501077_0084579 | 3300049593 | Bacteria | 2011 |
| 154 | Ga0501079_0012027 | 3300049741 | Bacteria | 6605 |
| 155 | Ga0501079_0044345 | 3300049741 | Bacteria | 3432 |
| 156 | Ga0501079_0081780 | 3300049741 | Bacteria | 2498 |
| 157 | Ga0501079_0126246 | 3300049741 | Bacteria | 1990 |
| 158 | Ga0501079_0171141 | 3300049741 | Bacteria | 1694 |
| 159 | Ga0501080_0048125 | 3300049742 | Bacteria | 3969 |
| 160 | Ga0501080_0170373 | 3300049742 | Bacteria | 2008 |
| 161 | Ga0501080_0253082 | 3300049742 | Bacteria | 1606 |
| 162 | Ga0501081_0012817 | 3300049743 | Bacteria | 5513 |
| 163 | Ga0501081_0014780 | 3300049743 | Bacteria | 5152 |
| 164 | Ga0501081_0019688 | 3300049743 | Bacteria | 4496 |
| 165 | Ga0501081_0094524 | 3300049743 | Bacteria | 2106 |
| 166 | Ga0501083_0022188 | 3300049744 | Bacteria | 4406 |
| 167 | Ga0501083_0168922 | 3300049744 | Bacteria | 1430 |
| 168 | Ga0501045_0007282 | 3300049824 | Bacteria | 7685 |
| 169 | Ga0501045_0014401 | 3300049824 | Bacteria | 5604 |
| 170 | Ga0501045_0037030 | 3300049824 | Bacteria | 3546 |
| 171 | Ga0501045_0072007 | 3300049824 | Bacteria | 2544 |
| 172 | Ga0501045_0097690 | 3300049824 | Bacteria | 2173 |
| 173 | Ga0501045_0314538 | 3300049824 | Bacteria | 1165 |
| 174 | nmdc:mga05p37_189130_c1 | 3300050507 | Bacteria | 2501 |
| 175 | nmdc:mga09592_15590_c1 | 3300050508 | Bacteria | 6210 |
| 176 | nmdc:mga09592_249962_c1 | 3300050508 | Bacteria | 1537 |
| 177 | nmdc:mga09592_3387_c1 | 3300050508 | Bacteria | 12879 |
| 178 | nmdc:mga0qj67_112009_c1 | 3300050509 | Bacteria | 2203 |
| 179 | nmdc:mga0qj67_410191_c1 | 3300050509 | Bacteria | 1093 |
| 180 | nmdc:mga06r32_10342_c1 | 3300050510 | Bacteria | 8414 |
| 181 | nmdc:mga06r32_44713_c1 | 3300050510 | Bacteria | 4218 |
| 182 | nmdc:mga06r32_86944_c1 | 3300050510 | Bacteria | 3050 |
| 183 | nmdc:mga08y16_277713_c1 | 3300050511 | Bacteria | 1728 |
| 184 | nmdc:mga0n895_28250_c1 | 3300050512 | Bacteria | 5336 |
| 185 | nmdc:mga0rr50_29318_c1 | 3300050513 | Bacteria | 3879 |
| 186 | nmdc:mga08x19_77172_c1 | 3300050514 | Bacteria | 2181 |
| 187 | nmdc:mga0a205_3895_c1 | 3300050515 | Bacteria | 13360 |
| 188 | Ga0500595_008516 | 3300053119 | Bacteria | 4186 |
| 189 | Ga0500642_0141196 | 3300053130 | Bacteria | 1130 |
| 190 | Ga0500568_0000342 | 3300053139 | Bacteria | 36454 |
| 191 | Ga0501084_0006099 | 3300054114 | Bacteria | 9910 |
| 192 | Ga0501084_0013284 | 3300054114 | Bacteria | 6813 |
| 193 | Ga0501084_0130436 | 3300054114 | Bacteria | 2116 |
| 194 | Ga0501082_0020332 | 3300060353 | Bacteria | 5723 |
| 195 | Ga0501082_0028133 | 3300060353 | Bacteria | 4844 |
| 196 | Ga0501082_0037064 | 3300060353 | Bacteria | 4201 |
| 197 | Ga0501082_0051826 | 3300060353 | Bacteria | 3537 |
| 198 | Ga0501082_0057494 | 3300060353 | Plasmid | 3351 |
| 199 | Ga0501082_0059311 | 3300060353 | Bacteria | 3298 |
| 200 | Ga0501082_0168337 | 3300060353 | Bacteria | 1905 |
| 201 | Ga0530510_0003855 | 3300061734 | Bacteria | 10334 |
| 202 | Ga0530510_0008168 | 3300061734 | Bacteria | 7301 |
| 203 | Ga0530510_0024459 | 3300061734 | Bacteria | 4310 |
| 204 | Ga0530510_0036057 | 3300061734 | Bacteria | 3565 |
| 205 | Ga0530510_0062775 | 3300061734 | Bacteria | 2689 |
| 206 | Ga0530510_0074275 | 3300061734 | Unclassified | 2468 |
| 207 | 2509139834 | 2508501127 | Bacteria | 7037543 |
| 208 | 2599415378 | 2599185170 | Bacteria | 7295545 |
| 209 | 2694630829 | 2693429783 | Bacteria | 7019804 |
| 210 | 2694634805 | 2693429784 | Bacteria | 7241525 |
| 211 | 2838038900 | 2838035591 | Bacteria | 7166484 |
| 212 | 2838664510 | 2838661181 | Bacteria | 7385261 |
| 213 | 2841738518 | 2841734538 | Bacteria | 6784580 |
| 214 | 2847689255 | 2847686936 | Bacteria | 6278406 |
| 215 | 2856347836 | 2856342000 | Bacteria | 7176905 |
| 216 | 2857351988 | 2857349434 | Bacteria | 7926032 |
| 217 | 2871478817 | 2871474448 | Bacteria | 6806570 |
| 218 | 2871496334 | 2871495908 | Bacteria | 6935695 |
| 219 | 2874105413 | 2874102143 | Bacteria | 6342645 |
| 220 | 2876385630 | 2876377896 | Bacteria | 6565995 |
| 221 | 2878760563 | 2878760144 | Bacteria | 6823465 |
| 222 | 2878767526 | 2878767105 | Bacteria | 6898628 |
| 223 | 2878793275 | 2878788777 | Bacteria | 6567085 |
| 224 | 2885333819 | 2885326080 | Bacteria | 7134805 |
| 225 | 2888346475 | 2888343758 | Bacteria | 6611049 |
| 226 | 2888354907 | 2888350351 | Bacteria | 7372807 |
| 227 | 2889016525 | 2889010040 | Bacteria | 6749192 |
| 228 | 2889018446 | 2889016732 | Bacteria | 6700763 |
| 229 | 2903541128 | 2903540706 | Bacteria | 7062119 |
| 230 | 2906359408 | 2906354277 | Bacteria | 6991324 |
| 231 | 2922191631 | 2922185730 | Bacteria | 7113964 |
| 232 | 2924759828 | 2924754689 | Bacteria | 6774424 |
| 233 | 2937841800 | 2937836603 | Bacteria | 6811263 |
| 234 | 2937893475 | 2937891427 | Bacteria | 6357007 |
| 235 | 2937994981 | 2937994558 | Bacteria | 7036190 |
| 236 | 2938021180 | 2938014810 | Bacteria | 6700592 |
| 237 | 2958077861 | 2958071322 | Bacteria | 6815895 |
| 238 | 2958103198 | 2958100919 | Bacteria | 6800575 |
| 239 | 2958119853 | 2958115193 | Bacteria | 6923548 |
| 240 | 2958165461 | 2958165035 | Bacteria | 6906348 |
| 241 | 2958175395 | 2958172287 | Bacteria | 6716688 |
| 242 | 2961163919 | 2961163497 | Bacteria | 6901077 |
| 243 | 2965018724 | 2965018300 | Bacteria | 6883036 |
| 244 | 2965063730 | 2965062239 | Bacteria | 7412989 |
| 245 | 2965121602 | 2965119406 | Bacteria | 6956431 |
| 246 | 2968096053 | 2968091066 | Bacteria | 6052692 |
| 247 | 2968102747 | 2968097103 | Bacteria | 6107094 |
| 248 | 2968130419 | 2968128360 | Bacteria | 6270294 |
| 249 | 2968172325 | 2968171901 | Bacteria | 6894245 |
| 250 | 2970528029 | 2970524798 | Bacteria | 6840927 |
| 251 | 2970545507 | 2970540015 | Bacteria | 6977556 |
| 252 | 2970555415 | 2970554993 | Bacteria | 6814252 |
| 253 | 2977944945 | 2977942078 | Bacteria | 7570577 |
| 254 | 2977976924 | 2977971508 | Bacteria | 7472917 |
| 255 | 2979715895 | 2979710463 | Bacteria | 6785254 |
| 256 | 2979749185 | 2979742915 | Bacteria | 7301278 |
| 257 | 2979785103 | 2979779861 | Bacteria | 6219781 |
| 258 | 2987639172 | 2987636660 | Bacteria | 8088555 |
| 259 | 2987659931 | 2987659509 | Bacteria | 6966464 |
| 260 | 2996341175 | 2996336353 | Bacteria | 5511628 |
| 261 | 3000408558 | 3000405567 | Bacteria | 3779330 |
| 262 | 3004188978 | 3004188549 | Bacteria | 6952365 |
| 263 | 3004204584 | 3004203850 | Bacteria | 7307914 |
| 264 | 641335212 | 641228493 | Bacteria | 3999591 |
| 265 | 8004403052 | 8004395343 | Bacteria | 6620908 |
| 266 | 8004638005 | 8004633249 | Bacteria | 6723080 |
| 267 | 8004707437 | 8004703790 | Bacteria | 8006957 |
| 268 | 8055620145 | 8055617313 | Bacteria | 7548464 |
| 269 | Ga0075428_100172823 | |||
| 270 | Ga0070680_100002609 | |||
| 271 | Ga0070691_10045669 | |||
| 272 | Ga0070703_10006284 | |||
| 273 | Ga0070701_10010374 | |||
| 274 | Ga0070705_100000950 | |||
| 275 | Ga0070700_100002600 | |||
| 276 | Ga0070694_100101206 | |||
| 277 | Ga0070708_100074408 | |||
| 278 | Ga0070681_10011979 | |||
| 279 | Ga0070707_100035847 | |||
| 280 | Ga0070699_100000958 | |||
| 281 | Ga0070695_100000397 | |||
| 282 | Ga0070695_100062557 | |||
| 283 | Ga0070696_100000229 | |||
| 284 | Ga0070665_100000913 | |||
| 285 | Ga0070665_100293710 | |||
| 286 | Ga0070704_100001299 | |||
| 287 | Ga0068857_100001246 | |||
| 288 | Ga0068859_100003426 | |||
| 289 | Ga0068860_100004306 | |||
| 290 | Ga0068860_100148073 | |||
| 291 | Ga0068862_100004070 | |||
| 292 | Ga0081455_10000209 | |||
| 293 | Ga0081455_10086298 | |||
| 294 | Ga0081538_10014368 | |||
| 295 | Ga0081538_10015648 | |||
| 296 | Ga0075428_100292393 | |||
| 297 | Ga0075430_100046323 | |||
| 298 | Ga0075431_100000333 | |||
| 299 | Ga0075431_100003698 | |||
| 300 | Ga0075431_100007917 | |||
| 301 | Ga0075431_100065627 | |||
| 302 | Ga0075434_100003619 | |||
| 303 | Ga0075429_100015560 | |||
| 304 | Ga0075429_100038291 | |||
| 305 | Ga0075429_100094820 | |||
| 306 | Ga0075436_100006111 | |||
| 307 | Ga0097620_100003426 | |||
| 308 | Ga0105240_10451216 | |||
| 309 | Ga0111539_10030253 | |||
| 310 | Ga0114129_10027925 | |||
| 311 | Ga0114129_10299782 | |||
| 312 | Ga0114129_10385440 | |||
| 313 | Ga0105237_10037676 | |||
| 314 | Ga0105238_10000852 | |||
| 315 | Ga0105238_10007469 | |||
| 316 | Ga0105249_10013768 | |||
| 317 | Ga0105239_10039767 | |||
| 318 | Ga0105239_10166567 | |||
| 319 | Ga0105246_10053527 | |||
| 320 | Ga0157370_10011654 | |||
| 321 | Ga0213875_10005161 | |||
| 322 | Ga0213875_10006825 | |||
| 323 | Ga0207653_10003265 | |||
| 324 | Ga0207647_10000883 | |||
| 325 | Ga0207707_10159454 | |||
| 326 | Ga0207707_10270628 | |||
| 327 | Ga0207695_10037850 | |||
| 328 | Ga0207695_10118147 | |||
| 329 | Ga0207660_10003943 | |||
| 330 | Ga0207652_10044696 | |||
| 331 | Ga0207694_10000713 | |||
| 332 | Ga0207706_10053782 | |||
| 333 | Ga0207709_10022599 | |||
| 334 | Ga0207689_10044421 | |||
| 335 | Ga0207712_10009621 | |||
| 336 | Ga0207708_10000819 | |||
| 337 | Ga0207674_10000240 | |||
| 338 | Ga0207683_10183288 | |||
| 339 | Ga0207428_10011892 | |||
| 340 | Ga0268266_10000346 | |||
| 341 | Ga0268266_10039584 | |||
| 342 | Ga0268265_10008947 | |||
| 343 | Ga0268264_10003036 | |||
| 344 | Ga0265327_10000163 | |||
| 345 | Ga0373940_0006514 | |||
| 346 | Ga0373949_0003621 | |||
| 347 | Ga0373932_0017087 | |||
| 348 | Ga0373939_0001108 | |||
| 349 | Ga0373941_0005024 | |||
| 350 | Ga0373961_0002588 | |||
| 351 | Ga0373961_0005157 | |||
| 352 | Ga0373962_0006009 | |||
| 353 | Ga0373931_0000562 | |||
| 354 | Ga0373931_0001385 | |||
| 355 | Ga0395899_0078390 | |||
| 356 | Ga0395900_0318225 | |||
| 357 | Ga0395905_0235315 | |||
| 358 | Ga0436364_0048841 | |||
| 359 | Ga0436364_0467718 | |||
| 360 | Ga0436364_0714857 | |||
| 361 | Ga0395901_0340960 | |||
| 362 | Ga0400483_058845 | |||
| 363 | Ga0400483_090797 | |||
| 364 | Ga0400483_229753 | |||
| 365 | Ga0400483_247651 | |||
| 366 | Ga0400483_285366 | |||
| 367 | Ga0466972_0102900 | |||
| 368 | Ga0451576_0092806 | |||
| 369 | Ga0495606_0047145 | |||
| 370 | Ga0495609_0016955 | |||
| 371 | Ga0496101_0064116 | |||
| 372 | Ga0496102_0046170 | |||
| 373 | Ga0496104_0129586 | |||
| 374 | Ga0496106_0011308 | |||
| 375 | Ga0496107_0010302 | |||
| 376 | Ga0496110_0285592 | |||
| 377 | Ga0501031_0011676 | |||
| 378 | Ga0501031_0137727 | |||
| 379 | Ga0501032_0100936 | |||
| 380 | Ga0501033_0041629 | |||
| 381 | Ga0501034_0016437 | |||
| 382 | Ga0501036_0044288 | |||
| 383 | Ga0501037_0155702 | |||
| 384 | Ga0501038_0087854 | |||
| 385 | Ga0501039_0011052 | |||
| 386 | Ga0501040_0006408 | |||
| 387 | Ga0501040_0007659 | |||
| 388 | Ga0501041_0037972 | |||
| 389 | Ga0501041_0065932 | |||
| 390 | Ga0501042_0003843 | |||
| 391 | Ga0501042_0148111 | |||
| 392 | Ga0501046_0233828 | |||
| 393 | Ga0501048_0007571 | |||
| 394 | Ga0501048_0007618 | |||
| 395 | Ga0501048_0062283 | |||
| 396 | Ga0501048_0136475 | |||
| 397 | Ga0501068_0139313 | |||
| 398 | Ga0501071_0010269 | |||
| 399 | Ga0501071_0017086 | |||
| 400 | Ga0501071_0025575 | |||
| 401 | Ga0501071_0117185 | |||
| 402 | Ga0501071_0118924 | |||
| 403 | Ga0501071_0236397 | |||
| 404 | Ga0501072_0005802 | |||
| 405 | Ga0501072_0019696 | |||
| 406 | Ga0501072_0022284 | |||
| 407 | Ga0501074_0007851 | |||
| 408 | Ga0501074_0019032 | |||
| 409 | Ga0501074_0138583 | |||
| 410 | Ga0501075_0004507 | |||
| 411 | Ga0501075_0015476 | |||
| 412 | Ga0501075_0096294 | |||
| 413 | Ga0501076_0000914 | |||
| 414 | Ga0501076_0020421 | |||
| 415 | Ga0501076_0041743 | |||
| 416 | Ga0501076_0052570 | |||
| 417 | Ga0501076_0155461 | |||
| 418 | Ga0501077_0015102 | |||
| 419 | Ga0501077_0019442 | |||
| 420 | Ga0501077_0030928 | |||
| 421 | Ga0501077_0084579 | |||
| 422 | Ga0501079_0012027 | |||
| 423 | Ga0501079_0044345 | |||
| 424 | Ga0501079_0081780 | |||
| 425 | Ga0501079_0126246 | |||
| 426 | Ga0501079_0171141 | |||
| 427 | Ga0501080_0048125 | |||
| 428 | Ga0501080_0170373 | |||
| 429 | Ga0501080_0253082 | |||
| 430 | Ga0501081_0012817 | |||
| 431 | Ga0501081_0014780 | |||
| 432 | Ga0501081_0019688 | |||
| 433 | Ga0501081_0094524 | |||
| 434 | Ga0501083_0022188 | |||
| 435 | Ga0501083_0168922 | |||
| 436 | Ga0501045_0007282 | |||
| 437 | Ga0501045_0014401 | |||
| 438 | Ga0501045_0037030 | |||
| 439 | Ga0501045_0072007 | |||
| 440 | Ga0501045_0097690 | |||
| 441 | Ga0501045_0314538 | |||
| 442 | nmdc:mga05p37_189130_c1 | |||
| 443 | nmdc:mga09592_15590_c1 | |||
| 444 | nmdc:mga09592_249962_c1 | |||
| 445 | nmdc:mga09592_3387_c1 | |||
| 446 | nmdc:mga0qj67_112009_c1 | |||
| 447 | nmdc:mga0qj67_410191_c1 | |||
| 448 | nmdc:mga06r32_10342_c1 | |||
| 449 | nmdc:mga06r32_44713_c1 | |||
| 450 | nmdc:mga06r32_86944_c1 | |||
| 451 | nmdc:mga08y16_277713_c1 | |||
| 452 | nmdc:mga0n895_28250_c1 | |||
| 453 | nmdc:mga0rr50_29318_c1 | |||
| 454 | nmdc:mga08x19_77172_c1 | |||
| 455 | nmdc:mga0a205_3895_c1 | |||
| 456 | Ga0500595_008516 | |||
| 457 | Ga0500642_0141196 | |||
| 458 | Ga0500568_0000342 | |||
| 459 | Ga0501084_0006099 | |||
| 460 | Ga0501084_0013284 | |||
| 461 | Ga0501084_0130436 | |||
| 462 | Ga0501082_0020332 | |||
| 463 | Ga0501082_0028133 | |||
| 464 | Ga0501082_0037064 | |||
| 465 | Ga0501082_0051826 | |||
| 466 | Ga0501082_0057494 | |||
| 467 | Ga0501082_0059311 | |||
| 468 | Ga0501082_0168337 | |||
| 469 | Ga0530510_0003855 | |||
| 470 | Ga0530510_0008168 | |||
| 471 | Ga0530510_0024459 | |||
| 472 | Ga0530510_0036057 | |||
| 473 | Ga0530510_0062775 | |||
| 474 | Ga0530510_0074275 | |||
| 475 | 2509139834 | |||
| 476 | 2599415378 | |||
| 477 | 2694630829 | |||
| 478 | 2694634805 | |||
| 479 | 2838038900 | |||
| 480 | 2838664510 | |||
| 481 | 2841738518 | |||
| 482 | 2847689255 | |||
| 483 | 2856347836 | |||
| 484 | 2857351988 | |||
| 485 | 2871478817 | |||
| 486 | 2871496334 | |||
| 487 | 2874105413 | |||
| 488 | 2876385630 | |||
| 489 | 2878760563 | |||
| 490 | 2878767526 | |||
| 491 | 2878793275 | |||
| 492 | 2885333819 | |||
| 493 | 2888346475 | |||
| 494 | 2888354907 | |||
| 495 | 2889016525 | |||
| 496 | 2889018446 | |||
| 497 | 2903541128 | |||
| 498 | 2906359408 | |||
| 499 | 2922191631 | |||
| 500 | 2924759828 | |||
| 501 | 2937841800 | |||
| 502 | 2937893475 | |||
| 503 | 2937994981 | |||
| 504 | 2938021180 | |||
| 505 | 2958077861 | |||
| 506 | 2958103198 | |||
| 507 | 2958119853 | |||
| 508 | 2958165461 | |||
| 509 | 2958175395 | |||
| 510 | 2961163919 | |||
| 511 | 2965018724 | |||
| 512 | 2965063730 | |||
| 513 | 2965121602 | |||
| 514 | 2968096053 | |||
| 515 | 2968102747 | |||
| 516 | 2968130419 | |||
| 517 | 2968172325 | |||
| 518 | 2970528029 | |||
| 519 | 2970545507 | |||
| 520 | 2970555415 | |||
| 521 | 2977944945 | |||
| 522 | 2977976924 | |||
| 523 | 2979715895 | |||
| 524 | 2979749185 | |||
| 525 | 2979785103 | |||
| 526 | 2987639172 | |||
| 527 | 2987659931 | |||
| 528 | 2996341175 | |||
| 529 | 3000408558 | |||
| 530 | 3004188978 | |||
| 531 | 3004204584 | |||
| 532 | 641335212 | |||
| 533 | 8004403052 | |||
| 534 | 8004638005 | |||
| 535 | 8004707437 | |||
| 536 | 8055620145 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6c8v-assembly1.cif.gz_A | x-ray structure of pqqe from methylobacterium extorquens | 0.9356 | 18 | 352 |
| 6c8v-assembly1.cif.gz_A | x-ray structure of pqqe from methylobacterium extorquens | 0.9153 | 18 | 352 |
| 6efn-assembly1.cif.gz_A-2 | structure of a ripp maturase, skfb | 0.8926 | 17 | 270 |
| 7tom-assembly1.cif.gz_A | x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound | 0.8413 | 18 | 223 |
| 5vsm-assembly2.cif.gz_B | crystal structure of viperin with bound [4fe-4s] cluster, 5'-deoxyadenosine, and l-methionine | 0.837 | 23 | 236 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WJ79_7_303_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.8525 | 13 | 304 | 3.20.20.70 |
| af_O33183_77_264_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.8521 | 20 | 201 | 3.20.20.70 |
| af_P9WJ79_7_303_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.8363 | 13 | 304 | 3.20.20.70 |
| af_O33183_77_264_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.8223 | 20 | 201 | 3.20.20.70 |
| af_Q2FX16_20_293_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.8152 | 16 | 235 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2P5M1H1-F1-model_v4 | Pyrroloquinoline quinone biosynthesis protein PqqE | 0.9904 | 17 | 311 |
GO:0016491
GO:0018189 GO:0046872 GO:0048038 GO:0051539 |
| AF-A0A257PGK9-F1-model_v4 | Pyrroloquinoline quinone biosynthesis protein PqqE | 0.987 | 18 | 286 |
GO:0003824
GO:0018189 GO:0046872 GO:0051539 |
| AF-A0A3S1GZD5-F1-model_v4 | Pyrroloquinoline quinone biosynthesis protein PqqE | 0.98 | 18 | 362 |
GO:0016491
GO:0018189 GO:0046872 GO:0051539 |
| AF-A0A4R3DIU0-F1-model_v4 | deleted | 0.9736 | 17 | 368 |
|
| AF-A0A257PGK9-F1-model_v4 | Pyrroloquinoline quinone biosynthesis protein PqqE | 0.9692 | 18 | 286 |
GO:0003824
GO:0018189 GO:0046872 GO:0051539 |