F374667

General Info

Members Datasets Scaffolds Average Seq Length
267 203 534 500

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10122165|Ga0070717_101221652
Length 530
Sequence MLPLPLWSRSIDYSPMTSTATQITHPDGRVELADPAVIADSRFANPELAPVPVGKRTWNTYNYSALWVGMSHNLPTYALAAGLIAIGMNAWQALITIALGNIIVLLPMLLNSHAGTKYGIPFPVFARAFYGVRGANVAALLRAFIACGWFGIQTWIGGEGIYEIFGKLAGNGWRDAGQFFGQPWTLWLSFAIFWVIQIGIIWRGMDTLRRFENWAAPFVLVVFVALLVWILTQAGGFGPLLSQPSSLGWGSGFWKVFPASLMAMIAFWSTMSLNMPDFTRFSRSQHSQRLGQVLGLPTTMTFFSVLSVLITSGTIALYGKAIWDPIQLSAKFSNPAVVILGLITVLVATVSVNVAANVVSPSYDFSNAAPKWVSFRTGGIITGVIAVLMQPWRLLSNPHVYIFTWLGFYGGLIGAVAGVLVAGYWLIRRTQLNLADLYREGGSYWFTGGWNLPAVVATLIGALLAVGGAYSAPGQGPFPADGLIPVLKPLYDYSWAVGFVAGLVVYWVLSLPVRSKAPAQLTPVVSTEGA

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
100 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
105 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
116 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
119 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
124 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
125 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
126 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
136 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
137 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
170 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
171 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
172 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
173 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
174 2558860280 Kutzneria sp. 744 Isolate Unclassified
175 2582580736 Prauserella sp. Am3 Isolate Unclassified
176 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
177 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
178 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
179 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
180 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
181 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
182 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
183 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
184 2858868258 Micromonospora sp. MH33 Isolate Unclassified
185 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
186 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
187 2862574272 Streptomyces sp. AcE210 Isolate Nodule
188 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
189 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
190 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
191 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
192 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
193 2902582711 Micromonospora sp. AP08 Isolate Unclassified
194 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
195 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
196 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
197 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
198 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
199 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
200 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
201 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
202 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
203 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.89
Metatranscriptomes 1.12
Isolates 11.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0.75
Rhizoplane 2.62
Rhizosphere 79.78
Stem 0
Stem Tuber 0.37
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10122165 3300006028 Bacteria 2232
2 JGI24737J22298_10002955 3300001990 Bacteria 6028
3 JGI25406J46586_10001268 3300003203 Bacteria 11846
4 Ga0070683_100087577 3300005329 Bacteria 2921
5 Ga0070690_100059328 3300005330 Bacteria 2459
6 Ga0070680_100018327 3300005336 Bacteria 5530
7 Ga0070680_100074779 3300005336 Bacteria 2788
8 Ga0070660_100024059 3300005339 Bacteria 4518
9 Ga0070689_100026189 3300005340 Bacteria 4389
10 Ga0070691_10016864 3300005341 Bacteria 3359
11 Ga0070687_100012771 3300005343 Bacteria 3719
12 Ga0070692_10001013 3300005345 Bacteria 9669
13 Ga0070668_100015583 3300005347 Bacteria 5681
14 Ga0070669_100043853 3300005353 Bacteria 3258
15 Ga0070675_100056934 3300005354 Bacteria 3223
16 Ga0070671_100089204 3300005355 Bacteria 2581
17 Ga0070674_100115352 3300005356 Bacteria 1980
18 Ga0070659_100097109 3300005366 Bacteria 2367
19 Ga0070709_10073713 3300005434 Bacteria 2211
20 Ga0070714_100002491 3300005435 Bacteria 13592
21 Ga0070714_100070452 3300005435 Bacteria 3022
22 Ga0070714_100090097 3300005435 Bacteria 2686
23 Ga0070713_100053133 3300005436 Bacteria 3356
24 Ga0070710_10000073 3300005437 Bacteria 45559
25 Ga0070710_10019892 3300005437 Bacteria 3476
26 Ga0070701_10089306 3300005438 Bacteria 1685
27 Ga0070711_100000071 3300005439 Bacteria 58870
28 Ga0070700_100079912 3300005441 Bacteria 2108
29 Ga0070700_100136487 3300005441 Bacteria 1662
30 Ga0070694_100054048 3300005444 Bacteria 2719
31 Ga0070663_100000311 3300005455 Bacteria 25155
32 Ga0070663_100040145 3300005455 Bacteria 3275
33 Ga0070678_100071880 3300005456 Bacteria 2591
34 Ga0070681_10083209 3300005458 Bacteria 3154
35 Ga0070681_10102504 3300005458 Bacteria 2807
36 Ga0070681_10191402 3300005458 Bacteria 1965
37 Ga0070698_100061264 3300005471 Bacteria 3796
38 Ga0070698_100127483 3300005471 Bacteria 2502
39 Ga0070699_100000512 3300005518 Bacteria 36772
40 Ga0070699_100024851 3300005518 Bacteria 5163
41 Ga0070679_100050925 3300005530 Bacteria 4125
42 Ga0070679_100204999 3300005530 Bacteria 1936
43 Ga0068853_100032659 3300005539 Bacteria 4411
44 Ga0070686_100024566 3300005544 Bacteria 3613
45 Ga0070696_100030520 3300005546 Bacteria 3690
46 Ga0070665_100047614 3300005548 Bacteria 4302
47 Ga0068855_100081661 3300005563 Bacteria 3747
48 Ga0070664_100014198 3300005564 Bacteria 6495
49 Ga0068854_100010544 3300005578 Bacteria 5995
50 Ga0068854_100110727 3300005578 Bacteria 2071
51 Ga0068856_100173159 3300005614 Bacteria 2171
52 Ga0068852_100059366 3300005616 Bacteria 3317
53 Ga0068862_100060849 3300005844 Bacteria 3245
54 Ga0081455_10001466 3300005937 Bacteria 29222
55 Ga0081540_1000619 3300005983 Bacteria 33751
56 Ga0081539_10001033 3300005985 Bacteria 51337
57 Ga0070712_100154060 3300006175 Bacteria 1768
58 Ga0068871_100118441 3300006358 Bacteria 2234
59 Ga0075431_100039500 3300006847 Bacteria 4861
60 Ga0075433_10028424 3300006852 Bacteria 4753
61 Ga0075434_100022719 3300006871 Bacteria 6108
62 Ga0075434_100074162 3300006871 Bacteria 3396
63 Ga0075429_100039456 3300006880 Bacteria 4109
64 Ga0075436_100001340 3300006914 Bacteria 16760
65 Ga0105251_10012373 3300009011 Bacteria 4828
66 Ga0105240_10067937 3300009093 Bacteria 4416
67 Ga0114129_10005419 3300009147 Bacteria 18018
68 Ga0114129_10175891 3300009147 Bacteria 2915
69 Ga0105238_10017287 3300009551 Bacteria 7327
70 Ga0105249_10016466 3300009553 Bacteria 6559
71 Ga0105249_10032720 3300009553 Unclassified 4705
72 Ga0157373_10087876 3300013100 Bacteria 2190
73 Ga0157369_10037971 3300013105 Bacteria 5269
74 Ga0157374_10178782 3300013296 Bacteria 2072
75 Ga0206354_11621039 3300020081 Bacteria 4175
76 Ga0213874_10012524 3300021377 Bacteria 2177
77 Ga0213875_10000473 3300021388 Bacteria 34472
78 Ga0213875_10006738 3300021388 Bacteria 6002
79 Ga0213875_10008221 3300021388 Bacteria 5355
80 Ga0213875_10009902 3300021388 Bacteria 4805
81 Ga0224712_10000940 3300022467 Bacteria 6288
82 Ga0224712_10004777 3300022467 Bacteria 3694
83 Ga0207653_10007146 3300025885 Bacteria 3489
84 Ga0207692_10001028 3300025898 Bacteria 10191
85 Ga0207692_10053324 3300025898 Bacteria 2059
86 Ga0207688_10024395 3300025901 Bacteria 3316
87 Ga0207647_10003348 3300025904 Bacteria 12021
88 Ga0207647_10025002 3300025904 Bacteria 3932
89 Ga0207699_10029597 3300025906 Bacteria 3055
90 Ga0207707_10035196 3300025912 Bacteria 4379
91 Ga0207707_10108418 3300025912 Bacteria 2428
92 Ga0207695_10183606 3300025913 Bacteria 2012
93 Ga0207693_10038604 3300025915 Bacteria 3759
94 Ga0207693_10089113 3300025915 Bacteria 2418
95 Ga0207663_10000051 3300025916 Bacteria 63011
96 Ga0207663_10030412 3300025916 Bacteria 3185
97 Ga0207660_10037938 3300025917 Bacteria 3360
98 Ga0207660_10074057 3300025917 Bacteria 2484
99 Ga0207657_10005492 3300025919 Bacteria 13239
100 Ga0207646_10045148 3300025922 Bacteria 3955
101 Ga0207681_10043482 3300025923 Bacteria 3007
102 Ga0207694_10045034 3300025924 Bacteria 3408
103 Ga0207700_10106328 3300025928 Bacteria 2249
104 Ga0207664_10001813 3300025929 Bacteria 14069
105 Ga0207664_10007289 3300025929 Bacteria 7671
106 Ga0207664_10013996 3300025929 Bacteria 5783
107 Ga0207664_10019802 3300025929 Bacteria 4980
108 Ga0207664_10039860 3300025929 Bacteria 3648
109 Ga0207664_10150896 3300025929 Bacteria 1974
110 Ga0207690_10076775 3300025932 Bacteria 2320
111 Ga0207691_10034840 3300025940 Bacteria 4678
112 Ga0207691_10048397 3300025940 Bacteria 3899
113 Ga0207689_10002639 3300025942 Bacteria 16600
114 Ga0207661_10061016 3300025944 Bacteria 3045
115 Ga0207661_10119652 3300025944 Bacteria 2240
116 Ga0207667_10175946 3300025949 Bacteria 2199
117 Ga0207712_10020618 3300025961 Bacteria 4320
118 Ga0207639_10018676 3300026041 Bacteria 4931
119 Ga0207678_10006524 3300026067 Bacteria 10349
120 Ga0207678_10008819 3300026067 Bacteria 8876
121 Ga0207678_10021892 3300026067 Bacteria 5604
122 Ga0207678_10026016 3300026067 Bacteria 5106
123 Ga0207678_10028145 3300026067 Bacteria 4908
124 Ga0207702_10044470 3300026078 Bacteria 3732
125 Ga0207702_10280041 3300026078 Bacteria 1576
126 Ga0207641_10088148 3300026088 Bacteria 2709
127 Ga0207683_10026032 3300026121 Bacteria 5052
128 Ga0209970_1002668 3300027614 Bacteria 3020
129 Ga0210002_1000774 3300027617 Bacteria 4332
130 Ga0209971_1001753 3300027682 Bacteria 5324
131 Ga0209974_10000184 3300027876 Bacteria 19703
132 Ga0268265_10041851 3300028380 Bacteria 3394
133 Ga0307517_10065140 3300028786 Bacteria 3377
134 Ga0307515_10020327 3300028794 Bacteria 11851
135 Ga0307511_10001664 3300030521 Bacteria 23418
136 Ga0307512_10017034 3300030522 Bacteria 6685
137 Ga0316176_1085655 3300030732 Bacteria 2182
138 Ga0307513_10064432 3300031456 Bacteria 3862
139 Ga0307509_10030384 3300031507 Bacteria 5978
140 Ga0307413_10000248 3300031824 Bacteria 16228
141 Ga0307518_10001042 3300031838 Bacteria 20741
142 Ga0307518_10019022 3300031838 Bacteria 4933
143 Ga0307507_10011011 3300033179 Bacteria 11512
144 Ga0307507_10076098 3300033179 Bacteria 2996
145 Ga0373927_0008377 3300035695 Bacteria 6960
146 Ga0373947_0018215 3300035725 Bacteria 4041
147 Ga0373925_0019390 3300037068 Bacteria 4946
148 Ga0436364_0186334 3300037853 Bacteria 2717
149 Ga0436364_0286649 3300037853 Bacteria 4034
150 Ga0436364_0287884 3300037853 Bacteria 10794
151 Ga0436364_0699238 3300037853 Bacteria 158550
152 Ga0436364_0739610 3300037853 Bacteria 33586
153 Ga0436363_1524623 3300039450 Bacteria 2507
154 Ga0451577_0081049 3300042876 Bacteria 2894
155 Ga0466969_0003414 3300044656 Bacteria 8446
156 Ga0466969_0003637 3300044656 Bacteria 8204
157 Ga0466969_0007962 3300044656 Bacteria 5624
158 Ga0466969_0034378 3300044656 Bacteria 2568
159 Ga0466969_0074635 3300044656 Bacteria 1626
160 Ga0466972_0014148 3300044658 Bacteria 3998
161 Ga0466965_0005500 3300044683 Bacteria 5712
162 Ga0466965_0015051 3300044683 Bacteria 3670
163 Ga0466966_0001399 3300044684 Bacteria 15522
164 Ga0466961_0002441 3300044693 Bacteria 11531
165 Ga0466961_0086565 3300044693 Bacteria 1980
166 Ga0466963_0009238 3300044694 Bacteria 5936
167 Ga0466970_0018300 3300044765 Bacteria 3625
168 Ga0466960_0013343 3300044901 Bacteria 3488
169 Ga0466959_0004207 3300045049 Bacteria 9589
170 Ga0466959_0007986 3300045049 Bacteria 7452
171 Ga0466958_0123821 3300045836 Bacteria 1620
172 Ga0466967_0001204 3300045976 Bacteria 14560
173 Ga0466967_0066767 3300045976 Bacteria 3206
174 Ga0466967_0069059 3300045976 Bacteria 3157
175 Ga0495592_0068911 3300046454 Bacteria 2581
176 Ga0495603_0006095 3300046455 Bacteria 7209
177 Ga0495629_0087349 3300046459 Bacteria 2176
178 Ga0495653_0091574 3300046463 Bacteria 2222
179 Ga0495664_0002649 3300046477 Bacteria 9627
180 Ga0495664_0072995 3300046477 Bacteria 2051
181 Ga0495628_0022831 3300046516 Bacteria 5137
182 Ga0495630_0102138 3300046517 Bacteria 2169
183 Ga0495666_0000699 3300046526 Bacteria 15230
184 Ga0495652_0002912 3300046529 Bacteria 17220
185 Ga0495645_0089172 3300046543 Bacteria 2205
186 Ga0495667_0011495 3300046559 Bacteria 5992
187 Ga0495667_0033510 3300046559 Bacteria 3437
188 Ga0495667_0090406 3300046559 Bacteria 1983
189 Ga0495635_0073067 3300046663 Bacteria 2349
190 Ga0495657_0030954 3300046675 Bacteria 3743
191 Ga0495657_0069791 3300046675 Bacteria 2298
192 Ga0495646_0019951 3300046680 Bacteria 4238
193 Ga0495589_0021074 3300046794 Bacteria 3331
194 Ga0495674_0157393 3300047319 Bacteria 1902
195 Ga0495680_0013419 3300047322 Bacteria 7150
196 Ga0495680_0020585 3300047322 Bacteria 5545
197 Ga0495680_0119541 3300047322 Bacteria 1946
198 Ga0495675_0072488 3300047444 Bacteria 2173
199 Ga0495684_0034736 3300047471 Bacteria 3868
200 Ga0495602_0059624 3300048088 Bacteria 3330
201 Ga0495602_0128604 3300048088 Bacteria 2024
202 Ga0496103_0043307 3300048906 Bacteria 2771
203 Ga0496106_0024838 3300048909 Bacteria 4455
204 Ga0496107_0055944 3300048910 Bacteria 2849
205 Ga0496107_0076876 3300048910 Bacteria 2432
206 Ga0496111_0027574 3300048914 Bacteria 4019
207 Ga0496112_0086120 3300048915 Bacteria 3109
208 Ga0496115_0053338 3300048918 Bacteria 3245
209 Ga0496126_0039058 3300048929 Bacteria 4408
210 Ga0496126_0043558 3300048929 Bacteria 4139
211 Ga0496126_0115805 3300048929 Bacteria 2330
212 Ga0501032_0009418 3300049569 Bacteria 7078
213 Ga0501033_0039067 3300049570 Bacteria 3545
214 Ga0501034_0023615 3300049571 Bacteria 6264
215 Ga0501036_0020835 3300049572 Bacteria 5507
216 Ga0501038_0040789 3300049574 Bacteria 4050
217 Ga0501039_0124800 3300049575 Bacteria 2019
218 Ga0501043_0021251 3300049579 Bacteria 5088
219 Ga0501047_0022406 3300049581 Bacteria 6065
220 Ga0501070_0118567 3300049586 Bacteria 2187
221 Ga0501076_0041686 3300049592 Bacteria 3613
222 Ga0501035_0009786 3300049822 Bacteria 8907
223 Ga0501044_0105187 3300049823 Bacteria 2835
224 nmdc:mga05p37_154490_c1 3300050507 Bacteria 2805
225 nmdc:mga09592_65231_c1 3300050508 Bacteria 3084
226 nmdc:mga06r32_30_c1 3300050510 Bacteria 11810
227 nmdc:mga0n895_126457_c1 3300050512 Bacteria 2580
228 nmdc:mga08x19_2_c1 3300050514 Bacteria 741277
229 nmdc:mga08x19_92049_c1 3300050514 Bacteria 2002
230 nmdc:mga0a205_108184_c1 3300050515 Bacteria 2678
231 nmdc:mga0a205_48342_c1 3300050515 Bacteria 4106
232 Ga0495601_0005072 3300053077 Bacteria 7644
233 Ga0495612_0032613 3300053078 Bacteria 2105
234 Ga0500573_0000100 3300053140 Bacteria 37372
235 Ga0501082_0057281 3300060353 Bacteria 3358
236 2515857282 2515154155 Bacteria 7985436
237 2558906160 2558860112 Bacteria 9931328
238 2559425335 2558860280 Bacteria 11429938
239 2583150992 2582580736 Bacteria 5325865
240 2586063139 2585427649 Bacteria 9053857
241 2623589449 2622736626 Bacteria 7181580
242 2753074583 2751185734 Bacteria 8863695
243 2791911537 2791354901 Bacteria 8322202
244 2795782637 2795385470 Bacteria 8317180
245 2809587715 2808606522 Bacteria 9488490
246 2812477698 2811994917 Bacteria 7761064
247 2816509843 2816332139 Bacteria 9138787
248 2858872093 2858868258 Bacteria 7683772
249 2862183971 2862178590 Bacteria 8583590
250 2862294913 2862290372 Bacteria 7471434
251 2862576480 2862574272 Bacteria 10567477
252 2866613968 2866612099 Bacteria 7543886
253 2870725522 2870721527 Bacteria 9689237
254 2870786317 2870782633 Bacteria 9624083
255 2899367495 2899359706 Bacteria 10940472
256 2899375393 2899370129 Bacteria 6781179
257 2902585149 2902582711 Bacteria 6187705
258 2915768911 2915768154 Bacteria 8424322
259 2917737299 2917736166 Bacteria 9690793
260 2929223906 2929219909 Bacteria 6984360
261 2990089959 2990088156 Bacteria 6657676
262 2996228370 2996221748 Bacteria 6799777
263 2997457454 2997451912 Bacteria 8492419
264 3006499934 3006493962 Bacteria 8825450
265 8003318323 8003314358 Bacteria 10575343
266 8047718677 8047710418 Bacteria 11023148
267 8055414216 8055412473 Bacteria 6257500
268 Ga0070717_10122165
269 JGI24737J22298_10002955
270 JGI25406J46586_10001268
271 Ga0070683_100087577
272 Ga0070690_100059328
273 Ga0070680_100018327
274 Ga0070680_100074779
275 Ga0070660_100024059
276 Ga0070689_100026189
277 Ga0070691_10016864
278 Ga0070687_100012771
279 Ga0070692_10001013
280 Ga0070668_100015583
281 Ga0070669_100043853
282 Ga0070675_100056934
283 Ga0070671_100089204
284 Ga0070674_100115352
285 Ga0070659_100097109
286 Ga0070709_10073713
287 Ga0070714_100002491
288 Ga0070714_100070452
289 Ga0070714_100090097
290 Ga0070713_100053133
291 Ga0070710_10000073
292 Ga0070710_10019892
293 Ga0070701_10089306
294 Ga0070711_100000071
295 Ga0070700_100079912
296 Ga0070700_100136487
297 Ga0070694_100054048
298 Ga0070663_100000311
299 Ga0070663_100040145
300 Ga0070678_100071880
301 Ga0070681_10083209
302 Ga0070681_10102504
303 Ga0070681_10191402
304 Ga0070698_100061264
305 Ga0070698_100127483
306 Ga0070699_100000512
307 Ga0070699_100024851
308 Ga0070679_100050925
309 Ga0070679_100204999
310 Ga0068853_100032659
311 Ga0070686_100024566
312 Ga0070696_100030520
313 Ga0070665_100047614
314 Ga0068855_100081661
315 Ga0070664_100014198
316 Ga0068854_100010544
317 Ga0068854_100110727
318 Ga0068856_100173159
319 Ga0068852_100059366
320 Ga0068862_100060849
321 Ga0081455_10001466
322 Ga0081540_1000619
323 Ga0081539_10001033
324 Ga0070712_100154060
325 Ga0068871_100118441
326 Ga0075431_100039500
327 Ga0075433_10028424
328 Ga0075434_100022719
329 Ga0075434_100074162
330 Ga0075429_100039456
331 Ga0075436_100001340
332 Ga0105251_10012373
333 Ga0105240_10067937
334 Ga0114129_10005419
335 Ga0114129_10175891
336 Ga0105238_10017287
337 Ga0105249_10016466
338 Ga0105249_10032720
339 Ga0157373_10087876
340 Ga0157369_10037971
341 Ga0157374_10178782
342 Ga0206354_11621039
343 Ga0213874_10012524
344 Ga0213875_10000473
345 Ga0213875_10006738
346 Ga0213875_10008221
347 Ga0213875_10009902
348 Ga0224712_10000940
349 Ga0224712_10004777
350 Ga0207653_10007146
351 Ga0207692_10001028
352 Ga0207692_10053324
353 Ga0207688_10024395
354 Ga0207647_10003348
355 Ga0207647_10025002
356 Ga0207699_10029597
357 Ga0207707_10035196
358 Ga0207707_10108418
359 Ga0207695_10183606
360 Ga0207693_10038604
361 Ga0207693_10089113
362 Ga0207663_10000051
363 Ga0207663_10030412
364 Ga0207660_10037938
365 Ga0207660_10074057
366 Ga0207657_10005492
367 Ga0207646_10045148
368 Ga0207681_10043482
369 Ga0207694_10045034
370 Ga0207700_10106328
371 Ga0207664_10001813
372 Ga0207664_10007289
373 Ga0207664_10013996
374 Ga0207664_10019802
375 Ga0207664_10039860
376 Ga0207664_10150896
377 Ga0207690_10076775
378 Ga0207691_10034840
379 Ga0207691_10048397
380 Ga0207689_10002639
381 Ga0207661_10061016
382 Ga0207661_10119652
383 Ga0207667_10175946
384 Ga0207712_10020618
385 Ga0207639_10018676
386 Ga0207678_10006524
387 Ga0207678_10008819
388 Ga0207678_10021892
389 Ga0207678_10026016
390 Ga0207678_10028145
391 Ga0207702_10044470
392 Ga0207702_10280041
393 Ga0207641_10088148
394 Ga0207683_10026032
395 Ga0209970_1002668
396 Ga0210002_1000774
397 Ga0209971_1001753
398 Ga0209974_10000184
399 Ga0268265_10041851
400 Ga0307517_10065140
401 Ga0307515_10020327
402 Ga0307511_10001664
403 Ga0307512_10017034
404 Ga0316176_1085655
405 Ga0307513_10064432
406 Ga0307509_10030384
407 Ga0307413_10000248
408 Ga0307518_10001042
409 Ga0307518_10019022
410 Ga0307507_10011011
411 Ga0307507_10076098
412 Ga0373927_0008377
413 Ga0373947_0018215
414 Ga0373925_0019390
415 Ga0436364_0186334
416 Ga0436364_0286649
417 Ga0436364_0287884
418 Ga0436364_0699238
419 Ga0436364_0739610
420 Ga0436363_1524623
421 Ga0451577_0081049
422 Ga0466969_0003414
423 Ga0466969_0003637
424 Ga0466969_0007962
425 Ga0466969_0034378
426 Ga0466969_0074635
427 Ga0466972_0014148
428 Ga0466965_0005500
429 Ga0466965_0015051
430 Ga0466966_0001399
431 Ga0466961_0002441
432 Ga0466961_0086565
433 Ga0466963_0009238
434 Ga0466970_0018300
435 Ga0466960_0013343
436 Ga0466959_0004207
437 Ga0466959_0007986
438 Ga0466958_0123821
439 Ga0466967_0001204
440 Ga0466967_0066767
441 Ga0466967_0069059
442 Ga0495592_0068911
443 Ga0495603_0006095
444 Ga0495629_0087349
445 Ga0495653_0091574
446 Ga0495664_0002649
447 Ga0495664_0072995
448 Ga0495628_0022831
449 Ga0495630_0102138
450 Ga0495666_0000699
451 Ga0495652_0002912
452 Ga0495645_0089172
453 Ga0495667_0011495
454 Ga0495667_0033510
455 Ga0495667_0090406
456 Ga0495635_0073067
457 Ga0495657_0030954
458 Ga0495657_0069791
459 Ga0495646_0019951
460 Ga0495589_0021074
461 Ga0495674_0157393
462 Ga0495680_0013419
463 Ga0495680_0020585
464 Ga0495680_0119541
465 Ga0495675_0072488
466 Ga0495684_0034736
467 Ga0495602_0059624
468 Ga0495602_0128604
469 Ga0496103_0043307
470 Ga0496106_0024838
471 Ga0496107_0055944
472 Ga0496107_0076876
473 Ga0496111_0027574
474 Ga0496112_0086120
475 Ga0496115_0053338
476 Ga0496126_0039058
477 Ga0496126_0043558
478 Ga0496126_0115805
479 Ga0501032_0009418
480 Ga0501033_0039067
481 Ga0501034_0023615
482 Ga0501036_0020835
483 Ga0501038_0040789
484 Ga0501039_0124800
485 Ga0501043_0021251
486 Ga0501047_0022406
487 Ga0501070_0118567
488 Ga0501076_0041686
489 Ga0501035_0009786
490 Ga0501044_0105187
491 nmdc:mga05p37_154490_c1
492 nmdc:mga09592_65231_c1
493 nmdc:mga06r32_30_c1
494 nmdc:mga0n895_126457_c1
495 nmdc:mga08x19_2_c1
496 nmdc:mga08x19_92049_c1
497 nmdc:mga0a205_108184_c1
498 nmdc:mga0a205_48342_c1
499 Ga0495601_0005072
500 Ga0495612_0032613
501 Ga0500573_0000100
502 Ga0501082_0057281
503 2515857282
504 2558906160
505 2559425335
506 2583150992
507 2586063139
508 2623589449
509 2753074583
510 2791911537
511 2795782637
512 2809587715
513 2812477698
514 2816509843
515 2858872093
516 2862183971
517 2862294913
518 2862576480
519 2866613968
520 2870725522
521 2870786317
522 2899367495
523 2899375393
524 2902585149
525 2915768911
526 2917737299
527 2929223906
528 2990089959
529 2996228370
530 2997457454
531 3006499934
532 8003318323
533 8047718677
534 8055414216

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02133

Transp_cyt_pur

Permease for cytosine/purines, uracil, thiamine, allantoin

50

498

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jln-assembly1.cif.gz_A structure of mhp1, a nucleobase-cation-symport-1 family transporter 0.8745 23 433
2x79-assembly1.cif.gz_A inward facing conformation of mhp1 0.8546 26 438
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.8272 29 417
2jln-assembly1.cif.gz_A structure of mhp1, a nucleobase-cation-symport-1 family transporter 0.7601 23 433
2x79-assembly1.cif.gz_A inward facing conformation of mhp1 0.7492 26 438
ID Description Score Start End Superfamily
af_I1L943_79_546_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.9497 22 436 1.10.4160.10
af_O14035_41_517_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.9371 26 438 1.10.4160.10
af_P75712_7_482_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.9241 26 438 1.10.4160.10
af_P38196_104_581_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.9179 18 434 1.10.4160.10
af_Q05998_19_505_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.9126 23 438 1.10.4160.10
ID Description Score Start End GO Terms
AF-A0A563EVY8-F1-model_v4 NCS1 family nucleobase:cation symporter-1 0.9799 2 440 GO:0005886
GO:0015205
AF-A0A2V9F7B9-F1-model_v4 Nitrate reductase 0.9759 69 438 GO:0005886
GO:0015205
AF-A0A2W2KHD8-F1-model_v4 Nitrate reductase 0.9745 22 440 GO:0005886
GO:0015205
AF-A0A2V8DRQ3-F1-model_v4 Nitrate reductase 0.9727 1 433 GO:0005886
GO:0015205
AF-A0A2V7VE93-F1-model_v4 Nitrate reductase 0.9716 21 435 GO:0005886
GO:0015205

Map