F374497

General Info

Members Datasets Scaffolds Average Seq Length
267 174 247 696

Family's Representative Sequence

Representative Sequence 3300005262|Ga0065165_1005276|Ga0065165_10052763
Length 728
Sequence MIRPLLLASAALFVAPPAFADTTPKTGGDSTTSNATPATSDVTDADASPQSDQDHNIIVTAPIRTSEADVLHGTSVVSGAELTRNMQPTIGETLAKQPGVSASSFGPSASRPILRGFQGERVRIMTDGIGSIDVSNTSADHAVVIDPLLSERVEVLRGPAALLFGSSAVGGVVNVIDNRIPRSIPANGYRLSGIATYGSAANERSGAAAGDVAIGRLVLHADGSYSKTDDLRIGGYALTPEKRAEALASAQLPPDPNDPEPIDFAANAAVKGTLPNTAAETWTAGVGAALITDGGNIGVSYSHYDSLYGVPIRFATLPGQEQEAPRLDVVQNRFDLRAEANASGFLQQVRLRVGYANYRHFELEEDGAVGTAFYNKGLEGRVELVQSDRGGWKGASGMQIFTRNFDVKGDEAFLPKNQTEQTGLFTLQQIDLGSFKAEAGLRYEFTRQSANPVAGDLRFFSGDRDFHTLSGSLGGSYGLSDAVRIGLNLSRTERAPSAEELFANGAHAGTQAYELGNPNFKPEESWGIEATLHAHGEGYSFDASAYYNWFSNYISDAQVAQSICEAAAAPSGRTVDLPCFQYTQSDARYYGFEAQGSLKVAEIGATKINVDALGDYVHANIVDQGPVPRIPAMRVLGGIEAQSDRVNGRFEVEHVFDQNRVAAYETTTDGYTMVNASVELKPFANDKIGLTLSANNIFDVDARRAASYLKDYAPLAGRDIRATLRFSL

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
3 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
4 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
5 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
6 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
7 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
8 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
9 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
10 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
11 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
12 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
13 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
14 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
15 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
16 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
17 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
18 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
19 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
20 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
21 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
22 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
23 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
24 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
25 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
26 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
27 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
28 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
29 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
30 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
31 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
32 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
37 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
38 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
39 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
70 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
72 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
73 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
78 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
112 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
113 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
114 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
115 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
116 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
117 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
118 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
119 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
120 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
121 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
125 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
126 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
127 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
130 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
131 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
132 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
133 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
151 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
152 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
153 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
154 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
155 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
156 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
157 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
158 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
162 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
163 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
164 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
165 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
166 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
167 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
168 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
169 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
170 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
171 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
172 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
173 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
174 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.88
Metatranscriptomes 0
Isolates 7.12

Biome Distribution

Category Percentage (%)
Aerial Root 1.87
Bulb 0
Endosphere 28.84
Nodule 0
Rhizoplane 2.25
Rhizosphere 59.55
Stem 0
Stem Tuber 0
Unclassified 7.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1001855 3300001904 Bacteria 3773
2 JGI24741J21665_1001264 3300001915 Bacteria 7427
3 JGI24752J21851_1001535 3300001976 Bacteria 3108
4 JGI24740J21852_10003760 3300001979 Bacteria 6606
5 JGI24739J22299_10000898 3300001989 Bacteria 10998
6 JGI24739J22299_10002135 3300001989 Bacteria 7581
7 JGI24739J22299_10003919 3300001989 Bacteria 5691
8 JGI24737J22298_10001055 3300001990 Bacteria 9732
9 JGI24737J22298_10006048 3300001990 Bacteria 4151
10 JGI24735J21928_10001582 3300002067 Bacteria 8082
11 JGI24735J21928_10006448 3300002067 Bacteria 3862
12 JGI24738J21930_10000369 3300002075 Bacteria 12550
13 JGI25150J39212_1000798 3300002774 Bacteria 10720
14 JGI25150J39212_1001047 3300002774 Bacteria 8444
15 JGI25153J46596_10000027 3300003215 Bacteria 210760
16 JGI25153J46596_10000535 3300003215 Bacteria 23843
17 Ga0055526_1001270 3300003771 Bacteria 18096
18 Ga0055526_1001321 3300003771 Bacteria 17733
19 Ga0055537_1000482 3300003773 Bacteria 24718
20 Ga0055537_1005084 3300003773 Bacteria 3598
21 Ga0055524_1000081 3300003775 Bacteria 119940
22 Ga0055524_1000165 3300003775 Bacteria 75996
23 Ga0055530_10000084 3300003791 Bacteria 80615
24 Ga0055530_10005398 3300003791 Bacteria 6106
25 Ga0055540_1000884 3300003792 Bacteria 19850
26 Ga0055540_1001052 3300003792 Bacteria 17586
27 Ga0055531_10000090 3300003794 Bacteria 100342
28 Ga0055531_10004776 3300003794 Bacteria 8099
29 Ga0055531_10013341 3300003794 Bacteria 3793
30 Ga0065165_1003170 3300005262 Bacteria 12060
31 Ga0065165_1005276 3300005262 Bacteria 7373
32 Ga0065165_1011697 3300005262 Bacteria 3629
33 Ga0070670_100011742 3300005331 Bacteria 7492
34 Ga0070670_100067075 3300005331 Bacteria 3079
35 Ga0070666_10000664 3300005335 Bacteria 20761
36 Ga0070668_100009929 3300005347 Bacteria 7051
37 Ga0070669_100000001 3300005353 Bacteria 537589
38 Ga0070671_100000007 3300005355 Bacteria 250397
39 Ga0070667_100000232 3300005367 Bacteria 63566
40 Ga0070663_100031330 3300005455 Bacteria 3654
41 Ga0068853_100009016 3300005539 Bacteria 8035
42 Ga0070665_100000043 3300005548 Bacteria 279774
43 Ga0070665_100009931 3300005548 Bacteria 9627
44 Ga0070664_100028113 3300005564 Bacteria 4676
45 Ga0068854_100008016 3300005578 Bacteria 6767
46 Ga0068856_100001038 3300005614 Bacteria 29509
47 Ga0068859_100001637 3300005617 Bacteria 22877
48 Ga0068859_100012049 3300005617 Bacteria 8687
49 Ga0068864_100000323 3300005618 Bacteria 42172
50 Ga0068861_100003719 3300005719 Bacteria 10177
51 Ga0068861_100007015 3300005719 Bacteria 7697
52 Ga0068851_10026682 3300005834 Bacteria 2841
53 Ga0068863_100000029 3300005841 Bacteria 177191
54 Ga0068863_100062515 3300005841 Bacteria 3521
55 Ga0068858_100002506 3300005842 Bacteria 18529
56 Ga0068860_100027977 3300005843 Bacteria 5428
57 Ga0068862_100023922 3300005844 Bacteria 5120
58 Ga0081455_10000220 3300005937 Bacteria 73579
59 Ga0081539_10015064 3300005985 Bacteria 5662
60 Ga0075366_10001360 3300006195 Bacteria 12216
61 Ga0097620_100001637 3300006931 Bacteria 22877
62 Ga0097620_100012049 3300006931 Bacteria 8687
63 Ga0105247_10009946 3300009101 Bacteria 5760
64 Ga0105243_10047792 3300009148 Bacteria 3371
65 Ga0105241_10004643 3300009174 Bacteria 10154
66 Ga0105248_10002018 3300009177 Bacteria 22518
67 Ga0105249_10024063 3300009553 Bacteria 5470
68 Ga0105148_100118 3300009978 Bacteria 12217
69 Ga0105239_10080230 3300010375 Bacteria 3590
70 Ga0157369_10047319 3300013105 Bacteria 4671
71 Ga0157378_10034683 3300013297 Bacteria 4462
72 Ga0163162_10106390 3300013306 Bacteria 2901
73 Ga0183363_1008 3300015690 Bacteria 194027
74 Ga0209147_100992 3300025229 Bacteria 12328
75 Ga0207425_1000005 3300025245 Bacteria 900502
76 Ga0207425_1000094 3300025245 Bacteria 85629
77 Ga0207425_1001706 3300025245 Bacteria 8727
78 Ga0209129_1000228 3300025258 Bacteria 63465
79 Ga0209565_1000007 3300025263 Bacteria 784361
80 Ga0209565_1000012 3300025263 Bacteria 606500
81 Ga0209565_1000180 3300025263 Bacteria 78672
82 Ga0209565_1000386 3300025263 Bacteria 37364
83 Ga0209676_1001342 3300025292 Bacteria 24674
84 Ga0209025_1000515 3300025294 Bacteria 73801
85 Ga0209025_1000727 3300025294 Bacteria 55857
86 Ga0209564_1000680 3300025295 Bacteria 50194
87 Ga0209564_1002114 3300025295 Bacteria 16891
88 Ga0209758_1000002 3300025297 Bacteria 1400310
89 Ga0209758_1000108 3300025297 Bacteria 216541
90 Ga0209758_1005222 3300025297 Bacteria 10178
91 Ga0209050_1000001 3300025298 Bacteria 3563507
92 Ga0209050_1000051 3300025298 Bacteria 353153
93 Ga0209050_1000342 3300025298 Bacteria 92644
94 Ga0209050_1009035 3300025298 Bacteria 5186
95 Ga0209256_1000008 3300025299 Bacteria 975723
96 Ga0209256_1000012 3300025299 Bacteria 790371
97 Ga0209051_1000226 3300025303 Bacteria 94990
98 Ga0209051_1000999 3300025303 Bacteria 27167
99 Ga0209257_1000028 3300025304 Bacteria 699493
100 Ga0209257_1001517 3300025304 Bacteria 27226
101 Ga0209257_1001522 3300025304 Bacteria 27092
102 Ga0209257_1002018 3300025304 Bacteria 21696
103 Ga0209257_1007904 3300025304 Bacteria 6251
104 Ga0209257_1011412 3300025304 Bacteria 4280
105 Ga0209257_1016770 3300025304 Bacteria 2938
106 Ga0207697_10000248 3300025315 Bacteria 29669
107 Ga0207710_10002467 3300025900 Bacteria 8575
108 Ga0207680_10000390 3300025903 Bacteria 20913
109 Ga0207647_10000783 3300025904 Bacteria 24687
110 Ga0207647_10032139 3300025904 Bacteria 3374
111 Ga0207654_10014666 3300025911 Bacteria 4052
112 Ga0207671_10024369 3300025914 Bacteria 4551
113 Ga0207681_10000002 3300025923 Bacteria 985597
114 Ga0207650_10001327 3300025925 Bacteria 17901
115 Ga0207644_10000002 3300025931 Bacteria 942221
116 Ga0207711_10003255 3300025941 Bacteria 14149
117 Ga0207667_10025973 3300025949 Bacteria 6406
118 Ga0207712_10034595 3300025961 Bacteria 3424
119 Ga0207668_10005568 3300025972 Bacteria 7425
120 Ga0207668_10006816 3300025972 Bacteria 6769
121 Ga0207640_10005401 3300025981 Bacteria 6966
122 Ga0207658_10000137 3300025986 Bacteria 77129
123 Ga0207639_10018661 3300026041 Bacteria 4932
124 Ga0207639_10027025 3300026041 Bacteria 4175
125 Ga0207678_10000095 3300026067 Bacteria 73553
126 Ga0207702_10000981 3300026078 Bacteria 29213
127 Ga0207641_10000049 3300026088 Bacteria 177222
128 Ga0207641_10022797 3300026088 Bacteria 5154
129 Ga0207676_10000304 3300026095 Bacteria 42178
130 Ga0207674_10018773 3300026116 Bacteria 7503
131 Ga0207674_10046946 3300026116 Bacteria 4431
132 Ga0207675_100000137 3300026118 Bacteria 62412
133 Ga0207675_100007671 3300026118 Bacteria 10186
134 Ga0209813_10000015 3300027866 Bacteria 83882
135 Ga0268266_10000002 3300028379 Bacteria 3059047
136 Ga0268264_10000071 3300028381 Bacteria 267236
137 Ga0268264_10013883 3300028381 Bacteria 6622
138 Ga0307412_10031008 3300031911 Bacteria 3372
139 Ga0307414_10032549 3300032004 Bacteria 3434
140 Ga0395900_0088367 3300037418 Bacteria 3186
141 Ga0395905_0049102 3300037471 Bacteria 3954
142 Ga0439461_0000027 3300041410 Bacteria 18688
143 Ga0439461_0000611 3300041410 Bacteria 5151
144 Ga0439465_0000555 3300041413 Bacteria 11222
145 Ga0451802_1229496 3300041460 Bacteria 6014
146 Ga0451806_268655 3300041462 Bacteria 6521
147 Ga0451807_0656318 3300041486 Bacteria 4791
148 Ga0439431_0003581 3300041997 Bacteria 3424
149 Ga0439431_0004232 3300041997 Bacteria 3149
150 Ga0439445_0000215 3300042004 Bacteria 10615
151 Ga0439445_0000241 3300042004 Bacteria 10317
152 Ga0439432_001055 3300042006 Bacteria 10477
153 Ga0439432_001358 3300042006 Bacteria 9256
154 Ga0439462_0000252 3300042015 Bacteria 9594
155 Ga0439462_0001825 3300042015 Bacteria 4826
156 Ga0439462_0008922 3300042015 Bacteria 2536
157 Ga0439434_0000242 3300042435 Bacteria 15222
158 Ga0439434_0001210 3300042435 Bacteria 7426
159 Ga0439434_0004665 3300042435 Bacteria 4017
160 Ga0495627_000036 3300046453 Bacteria 205589
161 Ga0495638_0000014 3300046460 Bacteria 417060
162 Ga0495638_0000048 3300046460 Bacteria 209787
163 Ga0495638_0000758 3300046460 Bacteria 34400
164 Ga0495638_0041807 3300046460 Bacteria 2898
165 Ga0495650_0003174 3300046471 Bacteria 12259
166 Ga0495583_0000175 3300046506 Bacteria 108912
167 Ga0495583_0001147 3300046506 Bacteria 28828
168 Ga0495606_0001464 3300046507 Bacteria 31526
169 Ga0495610_0000278 3300046512 Bacteria 53529
170 Ga0495616_0000216 3300046513 Bacteria 48001
171 Ga0495632_0000325 3300046519 Bacteria 45939
172 Ga0495632_0000357 3300046519 Bacteria 43422
173 Ga0495637_0000782 3300046520 Bacteria 21373
174 Ga0495637_0011205 3300046520 Bacteria 4314
175 Ga0495643_0000009 3300046522 Bacteria 344767
176 Ga0495648_0000976 3300046524 Bacteria 29504
177 Ga0495648_0024164 3300046524 Bacteria 4147
178 Ga0495663_0000003 3300046525 Bacteria 362694
179 Ga0495654_0013435 3300046530 Bacteria 4383
180 Ga0495654_0035324 3300046530 Bacteria 2518
181 Ga0495633_0000102 3300046558 Bacteria 115655
182 Ga0495633_0001754 3300046558 Bacteria 16102
183 Ga0495633_0027878 3300046558 Bacteria 2756
184 Ga0495625_0000031 3300046660 Bacteria 238193
185 Ga0495670_0000036 3300046691 Bacteria 78512
186 Ga0495670_0019028 3300046691 Bacteria 3384
187 Ga0495671_0000013 3300046692 Bacteria 344767
188 Ga0495671_0000403 3300046692 Bacteria 35087
189 Ga0495673_0000842 3300047469 Bacteria 28505
190 Ga0495681_0000099 3300047470 Bacteria 75808
191 Ga0495681_0015129 3300047470 Bacteria 4378
192 Ga0495681_0025824 3300047470 Bacteria 3069
193 Ga0495686_0000876 3300047472 Bacteria 38353
194 Ga0495686_0005936 3300047472 Bacteria 9504
195 Ga0495686_0013001 3300047472 Bacteria 5798
196 Ga0495686_0013931 3300047472 Bacteria 5561
197 Ga0496111_0012574 3300048914 Bacteria 5736
198 Ga0496115_0000522 3300048918 Bacteria 29892
199 Ga0496116_0024084 3300048919 Bacteria 4511
200 Ga0496116_0083847 3300048919 Bacteria 1965
201 Ga0496121_0000065 3300048924 Bacteria 269310
202 Ga0496122_0001355 3300048925 Bacteria 39961
203 Ga0496122_0020889 3300048925 Bacteria 5887
204 Ga0496123_0003882 3300048926 Bacteria 16264
205 Ga0496123_0025343 3300048926 Bacteria 4473
206 Ga0496123_0035754 3300048926 Bacteria 3534
207 Ga0496124_0000817 3300048927 Bacteria 50627
208 Ga0496124_0001193 3300048927 Bacteria 40502
209 Ga0496124_0011535 3300048927 Bacteria 8819
210 Ga0496124_0011958 3300048927 Bacteria 8636
211 Ga0496124_0014757 3300048927 Bacteria 7539
212 Ga0496125_0000425 3300048928 Bacteria 78294
213 Ga0496126_0050770 3300048929 Bacteria 3779
214 Ga0501290_000269 3300049513 Bacteria 8542
215 Ga0501292_000001 3300049515 Bacteria 211592
216 Ga0501223_000096 3300049663 Bacteria 25352
217 Ga0501257_000019 3300049686 Bacteria 47149
218 Ga0501261_000040 3300049690 Bacteria 25841
219 Ga0501225_0000143 3300049705 Bacteria 21691
220 Ga0501225_0001769 3300049705 Bacteria 6758
221 Ga0501225_0004292 3300049705 Bacteria 4262
222 Ga0501225_0005091 3300049705 Bacteria 3873
223 Ga0501279_000001 3300049775 Bacteria 299671
224 Ga0501280_000041 3300049776 Bacteria 37942
225 Ga0501281_00006 3300049777 Bacteria 33972
226 nmdc:mga06z11_65_c1 3300050494 Bacteria 43959
227 nmdc:mga04h51_33_c1 3300050495 Bacteria 47817
228 Ga0500643_000190 3300053087 Bacteria 58677
229 Ga0500643_000538 3300053087 Bacteria 26517
230 Ga0500566_0000251 3300053094 Bacteria 28795
231 Ga0500555_000120 3300053103 Bacteria 37499
232 Ga0500562_004216 3300053108 Bacteria 3634
233 Ga0500592_000157 3300053116 Bacteria 13700
234 Ga0500592_000524 3300053116 Bacteria 6315
235 Ga0500595_000725 3300053119 Bacteria 19606
236 Ga0500658_0000303 3300053134 Bacteria 22200
237 Ga0500658_0000405 3300053134 Bacteria 18718
238 Ga0500658_0001656 3300053134 Bacteria 8862
239 Ga0500658_0002105 3300053134 Bacteria 7743
240 Ga0500573_0000040 3300053140 Bacteria 105074
241 Ga0500624_000018 3300053157 Bacteria 131677
242 Ga0500624_001105 3300053157 Bacteria 5072
243 Ga0500627_0000247 3300053158 Bacteria 15427
244 Ga0500627_0006040 3300053158 Bacteria 4083
245 Ga0500636_0020146 3300053177 Bacteria 3946
246 Ga0500645_010010 3300053730 Bacteria 3158
247 Ga0500661_001695 3300055283 Bacteria 4147

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048919 Ga0496116_0083847 Ga0496116_0083847_24_1844 606
2 3300037418 Ga0395900_0088367 Ga0395900_0088367_404_2482 636
3 3300037471 Ga0395905_0049102 Ga0395905_0049102_1728_3806 636
4 3300001989 JGI24739J22299_10002135 JGI24739J22299_100021354 651
5 3300001990 JGI24737J22298_10001055 JGI24737J22298_100010552 651
6 3300002067 JGI24735J21928_10001582 JGI24735J21928_100015826 651
7 3300002075 JGI24738J21930_10000369 JGI24738J21930_1000036910 651
8 3300025904 Ga0207647_10000783 Ga0207647_1000078319 651
9 3300048927 Ga0496124_0014757 Ga0496124_0014757_5113_7275 652
10 3300047472 Ga0495686_0013001 Ga0495686_0013001_2335_4419 657
11 3300048926 Ga0496123_0035754 Ga0496123_0035754_85_2247 658
12 3300048927 Ga0496124_0011958 Ga0496124_0011958_1005_3167 658
13 3300025981 Ga0207640_10005401 Ga0207640_100054012 659
14 3300025914 Ga0207671_10024369 Ga0207671_100243694 660
15 3300001976 JGI24752J21851_1001535 JGI24752J21851_10015352 662
16 3300005331 Ga0070670_100011742 Ga0070670_1000117426 662
17 3300005335 Ga0070666_10000664 Ga0070666_100006646 662
18 3300005353 Ga0070669_100000001 Ga0070669_100000001326 662
19 3300005355 Ga0070671_100000007 Ga0070671_1000000075 662
20 3300005617 Ga0068859_100001637 Ga0068859_1000016377 662
21 3300005618 Ga0068864_100000323 Ga0068864_10000032345 662
22 3300005719 Ga0068861_100007015 Ga0068861_1000070153 662
23 3300005841 Ga0068863_100062515 Ga0068863_1000625154 662
24 3300005842 Ga0068858_100002506 Ga0068858_10000250610 662
25 3300005843 Ga0068860_100027977 Ga0068860_1000279773 662
26 3300005844 Ga0068862_100023922 Ga0068862_1000239224 662
27 3300006931 Ga0097620_100001637 Ga0097620_1000016377 662
28 3300009101 Ga0105247_10009946 Ga0105247_100099463 662
29 3300025315 Ga0207697_10000248 Ga0207697_1000024814 662
30 3300025900 Ga0207710_10002467 Ga0207710_1000246711 662
31 3300025903 Ga0207680_10000390 Ga0207680_100003906 662
32 3300025923 Ga0207681_10000002 Ga0207681_10000002678 662
33 3300025925 Ga0207650_10001327 Ga0207650_1000132715 662
34 3300025931 Ga0207644_10000002 Ga0207644_10000002680 662
35 3300025972 Ga0207668_10006816 Ga0207668_100068165 662
36 3300026088 Ga0207641_10022797 Ga0207641_100227974 662
37 3300026095 Ga0207676_10000304 Ga0207676_100003045 662
38 3300026118 Ga0207675_100000137 Ga0207675_1000001374 662
39 3300028381 Ga0268264_10000071 Ga0268264_10000071244 662
40 3300003792 Ga0055540_1000884 Ga0055540_10008843 663
41 3300025298 Ga0209050_1000342 Ga0209050_100034215 663
42 3300025303 Ga0209051_1000226 Ga0209051_100022612 663
43 3300025304 Ga0209257_1007904 Ga0209257_10079042 663
44 3300041460 Ga0451802_1229496 Ga0451802_1229496_816_2882 671
45 3300041462 Ga0451806_268655 Ga0451806_268655_1335_3398 671
46 3300041486 Ga0451807_0656318 Ga0451807_0656318_1098_3164 671
47 3300013105 Ga0157369_10047319 Ga0157369_100473191 672
48 3300046507 Ga0495606_0001464 Ga0495606_0001464_29454_31514 672
49 3300053730 Ga0500645_010010 Ga0500645_010010_832_2994 672
50 3300003771 Ga0055526_1001270 Ga0055526_100127013 674
51 3300005578 Ga0068854_100008016 Ga0068854_1000080164 674
52 3300025295 Ga0209564_1002114 Ga0209564_10021148 674
53 3300048914 Ga0496111_0012574 Ga0496111_0012574_53_2140 674
54 3300048925 Ga0496122_0001355 Ga0496122_0001355_27343_29430 674
55 3300048926 Ga0496123_0003882 Ga0496123_0003882_2715_4802 674
56 3300048927 Ga0496124_0011535 Ga0496124_0011535_697_2784 674
57 3300053134 Ga0500658_0000303 Ga0500658_0000303_12002_14173 674
58 3300003791 Ga0055530_10000084 Ga0055530_1000008487 675
59 3300003794 Ga0055531_10000090 Ga0055531_1000009074 675
60 3300005937 Ga0081455_10000220 Ga0081455_1000022063 675
61 3300005985 Ga0081539_10015064 Ga0081539_100150642 675
62 3300025298 Ga0209050_1000051 Ga0209050_1000051166 675
63 3300025304 Ga0209257_1000028 Ga0209257_1000028202 675
64 3300046460 Ga0495638_0041807 Ga0495638_0041807_729_2813 675
65 3300047472 Ga0495686_0000876 Ga0495686_0000876_31336_33417 675
66 3300047472 Ga0495686_0013931 Ga0495686_0013931_2964_5048 675
67 3300003775 Ga0055524_1000081 Ga0055524_100008132 676
68 3300003794 Ga0055531_10004776 Ga0055531_100047764 676
69 3300005262 Ga0065165_1003170 Ga0065165_10031705 676
70 3300005719 Ga0068861_100003719 Ga0068861_10000371910 676
71 3300025245 Ga0207425_1001706 Ga0207425_10017062 676
72 3300025263 Ga0209565_1000012 Ga0209565_1000012484 676
73 3300025297 Ga0209758_1005222 Ga0209758_10052229 676
74 3300025299 Ga0209256_1000012 Ga0209256_1000012675 676
75 3300026118 Ga0207675_100007671 Ga0207675_10000767110 676
76 3300053119 Ga0500595_000725 Ga0500595_000725_6097_8256 676
77 3300046506 Ga0495583_0000175 Ga0495583_0000175_11756_13843 677
78 3300046691 Ga0495670_0019028 Ga0495670_0019028_550_2637 677
79 3300053103 Ga0500555_000120 Ga0500555_000120_30300_32387 677
80 3300002774 JGI25150J39212_1001047 JGI25150J39212_10010477 678
81 3300003215 JGI25153J46596_10000535 JGI25153J46596_100005357 678
82 3300025245 Ga0207425_1000094 Ga0207425_100009416 678
83 3300025294 Ga0209025_1000727 Ga0209025_100072741 678
84 3300025297 Ga0209758_1000002 Ga0209758_100000216 678
85 3300025297 Ga0209758_1000108 Ga0209758_1000108201 678
86 3300042015 Ga0439462_0008922 Ga0439462_0008922_165_2273 678
87 3300042435 Ga0439434_0004665 Ga0439434_0004665_939_3047 678
88 3300047472 Ga0495686_0005936 Ga0495686_0005936_7012_9183 679
89 3300001989 JGI24739J22299_10003919 JGI24739J22299_100039194 681
90 3300002774 JGI25150J39212_1000798 JGI25150J39212_10007988 681
91 3300003215 JGI25153J46596_10000027 JGI25153J46596_10000027195 681
92 3300003773 Ga0055537_1005084 Ga0055537_10050842 681
93 3300025245 Ga0207425_1000005 Ga0207425_1000005209 681
94 3300025258 Ga0209129_1000228 Ga0209129_10002287 681
95 3300025263 Ga0209565_1000180 Ga0209565_100018070 681
96 3300025294 Ga0209025_1000515 Ga0209025_10005158 681
97 3300025297 Ga0209758_1000002 Ga0209758_10000021135 681
98 3300041410 Ga0439461_0000611 Ga0439461_0000611_1046_3220 681
99 3300041997 Ga0439431_0003581 Ga0439431_0003581_657_2831 681
100 3300042004 Ga0439445_0000215 Ga0439445_0000215_4198_6372 681
101 3300042006 Ga0439432_001055 Ga0439432_001055_6944_9118 681
102 3300042015 Ga0439462_0000252 Ga0439462_0000252_1369_3543 681
103 3300042435 Ga0439434_0001210 Ga0439434_0001210_1525_3699 681
104 3300048918 Ga0496115_0000522 Ga0496115_0000522_10946_13072 681
105 3300006195 Ga0075366_10001360 Ga0075366_1000136010 682
106 3300053140 Ga0500573_0000040 Ga0500573_0000040_26968_29034 682
107 3300003773 Ga0055537_1000482 Ga0055537_100048212 683
108 3300003775 Ga0055524_1000165 Ga0055524_100016549 683
109 3300003794 Ga0055531_10013341 Ga0055531_100133413 683
110 3300005262 Ga0065165_1011697 Ga0065165_10116972 683
111 3300015690 Ga0183363_1008 Ga0183363_100830 683
112 3300025263 Ga0209565_1000007 Ga0209565_1000007527 683
113 3300025299 Ga0209256_1000008 Ga0209256_1000008369 683
114 3300025304 Ga0209257_1002018 Ga0209257_10020186 683
115 3300031911 Ga0307412_10031008 Ga0307412_100310082 683
116 3300048927 Ga0496124_0000817 Ga0496124_0000817_40023_42188 683
117 3300053116 Ga0500592_000524 Ga0500592_000524_1796_3919 683
118 iso_pu_bacteria 2643221622 2644125419 683
119 3300003791 Ga0055530_10005398 Ga0055530_100053983 684
120 3300003792 Ga0055540_1001052 Ga0055540_10010528 684
121 3300025292 Ga0209676_1001342 Ga0209676_10013428 684
122 3300025298 Ga0209050_1000001 Ga0209050_10000011123 684
123 3300025303 Ga0209051_1000999 Ga0209051_10009995 684
124 3300025304 Ga0209257_1001517 Ga0209257_100151710 684
125 3300026116 Ga0207674_10018773 Ga0207674_100187734 684
126 3300005617 Ga0068859_100012049 Ga0068859_1000120494 685
127 3300006931 Ga0097620_100012049 Ga0097620_1000120499 685
128 3300009148 Ga0105243_10047792 Ga0105243_100477921 685
129 3300009177 Ga0105248_10002018 Ga0105248_1000201811 685
130 3300013297 Ga0157378_10034683 Ga0157378_100346832 685
131 3300025941 Ga0207711_10003255 Ga0207711_1000325513 685
132 3300025304 Ga0209257_1011412 Ga0209257_10114124 686
133 3300025304 Ga0209257_1016770 Ga0209257_10167701 686
134 3300041410 Ga0439461_0000027 Ga0439461_0000027_4020_6128 686
135 3300041413 Ga0439465_0000555 Ga0439465_0000555_978_3086 686
136 3300041997 Ga0439431_0004232 Ga0439431_0004232_480_2588 686
137 3300042004 Ga0439445_0000241 Ga0439445_0000241_2639_4747 686
138 3300042006 Ga0439432_001358 Ga0439432_001358_1260_3368 686
139 3300042015 Ga0439462_0001825 Ga0439462_0001825_1952_4060 686
140 3300042435 Ga0439434_0000242 Ga0439434_0000242_1226_3334 686
141 3300046530 Ga0495654_0013435 Ga0495654_0013435_1992_4076 686
142 3300046691 Ga0495670_0000036 Ga0495670_0000036_36606_38720 686
143 3300049513 Ga0501290_000269 Ga0501290_000269_1168_3252 686
144 3300049515 Ga0501292_000001 Ga0501292_000001_17837_19921 686
145 3300049686 Ga0501257_000019 Ga0501257_000019_17397_19484 686
146 3300049690 Ga0501261_000040 Ga0501261_000040_22131_24215 686
147 3300049705 Ga0501225_0005091 Ga0501225_0005091_615_2699 686
148 3300049775 Ga0501279_000001 Ga0501279_000001_17699_19783 686
149 3300049776 Ga0501280_000041 Ga0501280_000041_11797_13881 686
150 3300049777 Ga0501281_00006 Ga0501281_00006_28372_30456 686
151 3300053087 Ga0500643_000190 Ga0500643_000190_45632_47731 686
152 3300053116 Ga0500592_000157 Ga0500592_000157_2516_4600 686
153 3300053158 Ga0500627_0000247 Ga0500627_0000247_7101_9185 686
154 iso_pu_bacteria 2928027323 2928030327 686
155 iso_pu_bacteria 2984555340 2984558904 686
156 iso_pu_bacteria 2984564862 2984566582 686
157 iso_pu_bacteria 2993356040 2993357778 686
158 3300003771 Ga0055526_1001321 Ga0055526_100132111 687
159 3300025295 Ga0209564_1000680 Ga0209564_100068032 687
160 3300025298 Ga0209050_1009035 Ga0209050_10090352 687
161 3300025304 Ga0209257_1001522 Ga0209257_100152211 687
162 3300047470 Ga0495681_0025824 Ga0495681_0025824_625_2733 687
163 3300053094 Ga0500566_0000251 Ga0500566_0000251_13431_15542 687
164 3300053134 Ga0500658_0002105 Ga0500658_0002105_5202_7310 687
165 3300053157 Ga0500624_001105 Ga0500624_001105_2265_4394 687
166 3300053177 Ga0500636_0020146 Ga0500636_0020146_963_3092 687
167 iso_pu_bacteria 2643221622 2644128650 687
168 iso_pu_bacteria 2830075706 2830079022 687
169 3300025263 Ga0209565_1000386 Ga0209565_100038634 688
170 3300032004 Ga0307414_10032549 Ga0307414_100325492 688
171 3300046460 Ga0495638_0000758 Ga0495638_0000758_19588_21747 688
172 3300053157 Ga0500624_000018 Ga0500624_000018_42231_44375 688
173 iso_pu_bacteria 8057101203 8057101626 688
174 3300005539 Ga0068853_100009016 Ga0068853_1000090163 689
175 3300005548 Ga0070665_100000043 Ga0070665_100000043242 689
176 3300026041 Ga0207639_10027025 Ga0207639_100270253 689
177 3300028379 Ga0268266_10000002 Ga0268266_10000002349 689
178 3300053134 Ga0500658_0001656 Ga0500658_0001656_2824_4986 689
179 iso_pu_bacteria 2885429604 2885430841 689
180 3300005841 Ga0068863_100000029 Ga0068863_100000029170 690
181 3300025972 Ga0207668_10005568 Ga0207668_100055682 690
182 3300026088 Ga0207641_10000049 Ga0207641_10000049170 690
183 3300046471 Ga0495650_0003174 Ga0495650_0003174_3636_5747 690
184 iso_pu_bacteria 2599185359 2600228036 690
185 iso_pu_bacteria 2818991466 2819714487 690
186 iso_pu_bacteria 2879163058 2879165858 690
187 iso_pu_bacteria 2928526807 2928530703 690
188 iso_pu_bacteria 2928968154 2928968507 690
189 iso_pu_bacteria 2990265787 2990266653 690
190 iso_pu_bacteria 2993693658 2993695546 690
191 3300005262 Ga0065165_1005276 Ga0065165_10052763 691
192 iso_pu_bacteria 2946787523 2946788334 691
193 3300013306 Ga0163162_10106390 Ga0163162_101063901 692
194 3300046460 Ga0495638_0000048 Ga0495638_0000048_3970_6129 692
195 3300046530 Ga0495654_0035324 Ga0495654_0035324_25_2199 692
196 3300046660 Ga0495625_0000031 Ga0495625_0000031_140198_142357 692
197 3300053134 Ga0500658_0000405 Ga0500658_0000405_58_2217 692
198 3300049663 Ga0501223_000096 Ga0501223_000096_15881_18037 694
199 3300049705 Ga0501225_0000143 Ga0501225_0000143_3630_5786 694
200 3300025229 Ga0209147_100992 Ga0209147_10099212 697
201 3300046453 Ga0495627_000036 Ga0495627_000036_202062_204233 699
202 3300046524 Ga0495648_0024164 Ga0495648_0024164_786_2957 699
203 3300046558 Ga0495633_0027878 Ga0495633_0027878_405_2576 699
204 3300046512 Ga0495610_0000278 Ga0495610_0000278_31598_33739 700
205 3300046520 Ga0495637_0011205 Ga0495637_0011205_1334_3475 700
206 3300047470 Ga0495681_0000099 Ga0495681_0000099_2016_4157 700
207 3300053108 Ga0500562_004216 Ga0500562_004216_128_2260 700
208 iso_pu_bacteria 2512564014 2512645374 700
209 iso_pu_bacteria 2775507255 2778126188 700
210 3300005331 Ga0070670_100067075 Ga0070670_1000670752 701
211 3300005367 Ga0070667_100000232 Ga0070667_10000023224 701
212 3300025986 Ga0207658_10000137 Ga0207658_1000013725 701
213 3300028381 Ga0268264_10013883 Ga0268264_100138832 701
214 3300046519 Ga0495632_0000357 Ga0495632_0000357_1368_3473 701
215 3300046525 Ga0495663_0000003 Ga0495663_0000003_4593_6698 701
216 3300046558 Ga0495633_0001754 Ga0495633_0001754_1260_3365 701
217 3300009978 Ga0105148_100118 Ga0105148_1001184 702
218 3300049705 Ga0501225_0001769 Ga0501225_0001769_4524_6635 702
219 3300049705 Ga0501225_0004292 Ga0501225_0004292_616_2727 702
220 3300005347 Ga0070668_100009929 Ga0070668_1000099292 703
221 3300005548 Ga0070665_100009931 Ga0070665_1000099312 703
222 3300046460 Ga0495638_0000014 Ga0495638_0000014_52291_54408 703
223 3300046506 Ga0495583_0001147 Ga0495583_0001147_17272_19389 703
224 3300046513 Ga0495616_0000216 Ga0495616_0000216_38358_40478 703
225 3300046519 Ga0495632_0000325 Ga0495632_0000325_35593_37710 703
226 3300046524 Ga0495648_0000976 Ga0495648_0000976_16725_18842 703
227 3300046692 Ga0495671_0000403 Ga0495671_0000403_9440_11557 703
228 3300047469 Ga0495673_0000842 Ga0495673_0000842_9440_11557 703
229 3300048919 Ga0496116_0024084 Ga0496116_0024084_219_2363 703
230 3300048924 Ga0496121_0000065 Ga0496121_0000065_196895_199006 703
231 3300053087 Ga0500643_000538 Ga0500643_000538_19378_21495 703
232 3300053158 Ga0500627_0006040 Ga0500627_0006040_130_2250 703
233 3300055283 Ga0500661_001695 Ga0500661_001695_972_3089 703
234 3300001904 JGI24736J21556_1001855 JGI24736J21556_10018552 704
235 3300001915 JGI24741J21665_1001264 JGI24741J21665_10012645 704
236 3300001979 JGI24740J21852_10003760 JGI24740J21852_100037606 704
237 3300001989 JGI24739J22299_10000898 JGI24739J22299_100008983 704
238 3300001990 JGI24737J22298_10006048 JGI24737J22298_100060482 704
239 3300002067 JGI24735J21928_10006448 JGI24735J21928_100064483 704
240 3300005455 Ga0070663_100031330 Ga0070663_1000313302 704
241 3300005564 Ga0070664_100028113 Ga0070664_1000281132 704
242 3300005614 Ga0068856_100001038 Ga0068856_10000103836 704
243 3300005834 Ga0068851_10026682 Ga0068851_100266822 704
244 3300009174 Ga0105241_10004643 Ga0105241_100046437 704
245 3300009553 Ga0105249_10024063 Ga0105249_100240631 704
246 3300010375 Ga0105239_10080230 Ga0105239_100802302 704
247 3300025904 Ga0207647_10032139 Ga0207647_100321392 704
248 3300025911 Ga0207654_10014666 Ga0207654_100146663 704
249 3300025949 Ga0207667_10025973 Ga0207667_100259733 704
250 3300025961 Ga0207712_10034595 Ga0207712_100345952 704
251 3300026041 Ga0207639_10018661 Ga0207639_100186613 704
252 3300026067 Ga0207678_10000095 Ga0207678_1000009511 704
253 3300026078 Ga0207702_10000981 Ga0207702_100009819 704
254 3300026116 Ga0207674_10046946 Ga0207674_100469462 704
255 3300027866 Ga0209813_10000015 Ga0209813_1000001582 704
256 3300046520 Ga0495637_0000782 Ga0495637_0000782_1278_3395 704
257 3300046522 Ga0495643_0000009 Ga0495643_0000009_175948_178065 704
258 3300046558 Ga0495633_0000102 Ga0495633_0000102_60209_62326 704
259 3300046692 Ga0495671_0000013 Ga0495671_0000013_175948_178065 704
260 3300047470 Ga0495681_0015129 Ga0495681_0015129_1420_3537 704
261 3300048925 Ga0496122_0020889 Ga0496122_0020889_3687_5804 704
262 3300048926 Ga0496123_0025343 Ga0496123_0025343_1216_3333 704
263 3300048927 Ga0496124_0001193 Ga0496124_0001193_2919_5036 704
264 3300048928 Ga0496125_0000425 Ga0496125_0000425_44133_46250 704
265 3300048929 Ga0496126_0050770 Ga0496126_0050770_525_2642 704
266 3300050494 nmdc:mga06z11_65_c1 nmdc:mga06z11_65_c1_29795_31924 704
267 3300050495 nmdc:mga04h51_33_c1 nmdc:mga04h51_33_c1_44251_46380 704

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

66

172

0.95

PF14905

OMP_b-brl_3

Outer membrane protein beta-barrel family

418

713

0.79

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

272

697

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4rvw-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with 20 micromolar zinc) 0.9239 59 704
4rvw-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with 20 micromolar zinc) 0.9062 59 704
4rdt-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8777 50 704
4rdt-assembly2.cif.gz_B structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8764 50 704
4rdt-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8764 50 704
ID Description Score Start End Superfamily
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8188 167 704 2.40.170.20
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8111 167 704 2.40.170.20
4rdrA01 Mainly Beta;Beta Complex;Ferric Hydroxamate Uptake Protein; Chain A, domain 1;TonB-dependent receptor, plug domain 0.8108 49 168 2.170.130.10
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8024 169 704 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8006 169 704 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A4Q2YUM5-F1-model_v4 TonB-dependent receptor 0.9205 112 665 GO:0009279
GO:0015344
AF-A0A4Q2YUM5-F1-model_v4 TonB-dependent receptor 0.9155 112 665 GO:0009279
GO:0015344
AF-A0A3D2SNF0-F1-model_v4 TonB-dependent receptor 0.9022 395 577 GO:0009279
GO:0015344
AF-A0A7W3U9B2-F1-model_v4 deleted 0.8955 54 704
AF-A0A3D2SNF0-F1-model_v4 TonB-dependent receptor 0.892 395 577 GO:0009279
GO:0015344

Feature Viewer

pLDDT pTM Quality
83.73 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map