F374455

General Info

Members Datasets Scaffolds Average Seq Length
267 182 534 401

Family's Representative Sequence

Representative Sequence 3300001979|JGI24740J21852_10000106|JGI24740J21852_1000010639
Length 467
Sequence MGSFSAHHIPVLSACKNLCFTTAYIPIFTRLAACTLCTSPSAYPYISFTFAIAKPIKTMPDISQRGRQMPPSPIRKLVPYAEAAKKKGVKVYHLNIGQPDIETPKPVLDAVRHSDFKVLEYSHSAGNESYRRKLVTYYERFNIQVNHQQIIVTTGGSEAILFSFMACLDAGDEVIVPEPFYANYNGFAVEAGITIRTIGSSIESGFALPAMEAFEKAITPRTKAILICNPNNPTGYLYSKEEMEVLKQLCLQHNLYLFSDEAYREFCYTGQHFSAMNLEGLDNHVILMDTISKRYSACGGRIGALVTKNQQVLDAVMKFAQARLSPPSFAQIAGEAAVDLPADYFDGIKAEYLARRDVLVAGLNNIPGVFCPNPGGAFYAMAKLPIDDADLFCQWLLESFAYEQQTVMMAPGTGFYATPGLGKQEVRLAYVINKEDIAKAMVCLEKALEVYPGRVATATANTIITHG

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
94 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
95 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
140 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
145 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
146 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
147 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
148 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
149 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
150 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
151 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
152 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
153 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
157 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
161 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
162 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
163 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
164 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
167 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
168 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
169 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
170 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
171 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
172 2818991444 Filimonas endophytica 3197 Isolate Unclassified
173 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
174 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
175 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
176 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
177 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
178 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
179 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
180 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
181 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
182 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.51
Metatranscriptomes 0
Isolates 4.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.85
Nodule 0
Rhizoplane 1.12
Rhizosphere 70.79
Stem 0
Stem Tuber 0
Unclassified 5.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000106 3300001979 Bacteria 29886
2 SwRhRL2b_contig_1663676 2162886007 Bacteria 241831
3 JGI25154J39366_1000001 3300002738 Bacteria 483450
4 rootH2_10092067 3300003320 Bacteria 2410
5 rootH2_10134670 3300003320 Bacteria 3341
6 rootL2_10098619 3300003322 Bacteria 6748
7 rootL2_10105884 3300003322 Bacteria 1757
8 rootH1_10126167 3300003323 Bacteria 3975
9 JGI25160J50197_1000809 3300003354 Bacteria 16812
10 JGI25160J50197_1003018 3300003354 Bacteria 7668
11 JGI25160J50197_1005014 3300003354 Bacteria 5601
12 Ga0055535_1001625 3300003761 Bacteria 10521
13 Ga0055526_1016626 3300003771 Bacteria 2862
14 Ga0055526_1021147 3300003771 Bacteria 2276
15 Ga0055528_1000330 3300003790 Bacteria 39818
16 Ga0055530_10000331 3300003791 Bacteria 42800
17 Ga0055531_10000133 3300003794 Bacteria 84995
18 Ga0055531_10000166 3300003794 Bacteria 74728
19 Ga0065165_1000105 3300005262 Bacteria 140409
20 Ga0065165_1012048 3300005262 Bacteria 3552
21 Ga0065704_10070136 3300005289 Bacteria 560402
22 Ga0065712_10110729 3300005290 Bacteria 1831
23 Ga0070670_100037547 3300005331 Bacteria 4168
24 Ga0070680_100002381 3300005336 Bacteria 13906
25 Ga0070680_100010714 3300005336 Bacteria 7077
26 Ga0070669_100025075 3300005353 Bacteria 4281
27 Ga0070669_100087419 3300005353 Bacteria 2331
28 Ga0070669_100110887 3300005353 Bacteria 2082
29 Ga0070675_100144336 3300005354 Bacteria 2037
30 Ga0070675_100188248 3300005354 Bacteria 1787
31 Ga0070659_100099202 3300005366 Bacteria 2343
32 Ga0070667_100001551 3300005367 Bacteria 20596
33 Ga0070667_100119013 3300005367 Unclassified 2296
34 Ga0070681_10018272 3300005458 Bacteria 7008
35 Ga0070681_10112668 3300005458 Bacteria 2660
36 Ga0070685_10145572 3300005466 Bacteria 1496
37 Ga0070679_100000656 3300005530 Bacteria 29462
38 Ga0070679_100092357 3300005530 Unclassified 3014
39 Ga0070672_100008266 3300005543 Bacteria 7112
40 Ga0070686_100093382 3300005544 Bacteria 2017
41 Ga0070693_100012187 3300005547 Bacteria 4348
42 Ga0070665_100000013 3300005548 Bacteria 484927
43 Ga0070665_100003563 3300005548 Bacteria 16511
44 Ga0068855_100020736 3300005563 Bacteria 7883
45 Ga0068855_100170793 3300005563 Bacteria 2463
46 Ga0068857_100098911 3300005577 Bacteria 2616
47 Ga0068857_100189560 3300005577 Bacteria 1873
48 Ga0068854_100225634 3300005578 Bacteria 1484
49 Ga0068856_100017636 3300005614 Bacteria 6920
50 Ga0068859_100062859 3300005617 Bacteria 3743
51 Ga0068860_100000060 3300005843 Bacteria 195631
52 Ga0068860_100002354 3300005843 Bacteria 19854
53 Ga0068860_100025213 3300005843 Bacteria 5739
54 Ga0081540_1010354 3300005983 Bacteria 6324
55 Ga0075366_10014169 3300006195 Bacteria 4551
56 Ga0097621_100299368 3300006237 Bacteria 1420
57 Ga0075431_100003240 3300006847 Bacteria 15762
58 Ga0097620_100062860 3300006931 Bacteria 3743
59 Ga0105240_10000037 3300009093 Bacteria 270462
60 Ga0105240_10000716 3300009093 Bacteria 60717
61 Ga0105240_10004490 3300009093 Bacteria 21219
62 Ga0105240_10007731 3300009093 Bacteria 15551
63 Ga0105240_10025764 3300009093 Bacteria 7723
64 Ga0105240_10149776 3300009093 Bacteria 2781
65 Ga0105240_10196636 3300009093 Bacteria 2366
66 Ga0111539_10150364 3300009094 Unclassified 2725
67 Ga0114129_10002180 3300009147 Bacteria 26943
68 Ga0105241_10007905 3300009174 Bacteria 7819
69 Ga0105237_10001011 3300009545 Bacteria 37832
70 Ga0105237_10001524 3300009545 Bacteria 30382
71 Ga0105237_10010675 3300009545 Bacteria 9752
72 Ga0105237_10029101 3300009545 Bacteria 5619
73 Ga0105237_10074424 3300009545 Bacteria 3388
74 Ga0105237_10089082 3300009545 Bacteria 3075
75 Ga0105237_10208102 3300009545 Bacteria 1956
76 Ga0105238_10030633 3300009551 Bacteria 5476
77 Ga0105249_10281597 3300009553 Unclassified 1661
78 Ga0105239_10000632 3300010375 Bacteria 50170
79 Ga0105239_10001043 3300010375 Bacteria 38594
80 Ga0105239_10004354 3300010375 Bacteria 16963
81 Ga0105239_10009813 3300010375 Bacteria 10757
82 Ga0157373_10038103 3300013100 Bacteria 3446
83 Ga0157373_10044872 3300013100 Bacteria 3156
84 Ga0157373_10099830 3300013100 Bacteria 2043
85 Ga0157373_10204006 3300013100 Bacteria 1394
86 Ga0157371_10028450 3300013102 Bacteria 4047
87 Ga0157371_10038474 3300013102 Bacteria 3422
88 Ga0157370_10003936 3300013104 Bacteria 17285
89 Ga0157370_10006313 3300013104 Bacteria 13097
90 Ga0157369_10053625 3300013105 Bacteria 4357
91 Ga0157374_10000007 3300013296 Bacteria 595643
92 Ga0163162_10000934 3300013306 Bacteria 27147
93 Ga0157372_10002998 3300013307 Bacteria 18208
94 Ga0157372_10004831 3300013307 Bacteria 14330
95 Ga0157372_10006930 3300013307 Bacteria 12059
96 Ga0157372_10030951 3300013307 Bacteria 5857
97 Ga0157372_10472354 3300013307 Bacteria 1462
98 Ga0157375_10069194 3300013308 Bacteria 3535
99 Ga0163163_10033251 3300014325 Bacteria 4988
100 Ga0157380_10005749 3300014326 Bacteria 8676
101 Ga0157376_10002586 3300014969 Bacteria 12286
102 Ga0182005_1000147 3300015265 Bacteria 49428
103 Ga0213876_10003046 3300021384 Bacteria 9692
104 Ga0209436_100232 3300025208 Bacteria 25536
105 Ga0209436_103413 3300025208 Bacteria 4236
106 Ga0209258_100041 3300025242 Bacteria 381381
107 Ga0209646_1000002 3300025246 Bacteria 1425781
108 Ga0209026_1000299 3300025250 Bacteria 54147
109 Ga0209148_1000090 3300025254 Bacteria 250982
110 Ga0209673_1000034 3300025273 Bacteria 328788
111 Ga0209130_1001596 3300025284 Bacteria 14171
112 Ga0209564_1005409 3300025295 Bacteria 7309
113 Ga0209758_1001095 3300025297 Bacteria 35071
114 Ga0209758_1009500 3300025297 Bacteria 6027
115 Ga0209050_1000207 3300025298 Bacteria 131328
116 Ga0207426_1000030 3300025302 Bacteria 461478
117 Ga0207426_1000603 3300025302 Bacteria 46872
118 Ga0207426_1000813 3300025302 Bacteria 33506
119 Ga0207426_1003003 3300025302 Bacteria 9818
120 Ga0209257_1000001 3300025304 Bacteria 2274655
121 Ga0207647_10002343 3300025904 Bacteria 14395
122 Ga0207647_10008644 3300025904 Bacteria 7280
123 Ga0207654_10002049 3300025911 Bacteria 10345
124 Ga0207654_10114045 3300025911 Bacteria 1686
125 Ga0207707_10009630 3300025912 Bacteria 8381
126 Ga0207707_10104390 3300025912 Unclassified 2477
127 Ga0207695_10000092 3300025913 Bacteria 270514
128 Ga0207695_10000862 3300025913 Bacteria 55457
129 Ga0207695_10004710 3300025913 Bacteria 18478
130 Ga0207695_10011871 3300025913 Bacteria 10500
131 Ga0207671_10000025 3300025914 Bacteria 271617
132 Ga0207671_10001240 3300025914 Bacteria 30129
133 Ga0207671_10003400 3300025914 Bacteria 15913
134 Ga0207671_10092426 3300025914 Bacteria 2281
135 Ga0207660_10000111 3300025917 Bacteria 46780
136 Ga0207660_10160872 3300025917 Bacteria 1732
137 Ga0207652_10000460 3300025921 Bacteria 42038
138 Ga0207652_10042657 3300025921 Bacteria 3862
139 Ga0207681_10031636 3300025923 Bacteria 3458
140 Ga0207694_10042335 3300025924 Bacteria 3513
141 Ga0207659_10072973 3300025926 Bacteria 2511
142 Ga0207659_10099996 3300025926 Bacteria 2185
143 Ga0207690_10017946 3300025932 Bacteria 4332
144 Ga0207669_10104044 3300025937 Bacteria 1885
145 Ga0207667_10009578 3300025949 Bacteria 11400
146 Ga0207667_10026924 3300025949 Bacteria 6272
147 Ga0207667_10143095 3300025949 Unclassified 2462
148 Ga0207658_10013251 3300025986 Bacteria 5631
149 Ga0207702_10024835 3300026078 Bacteria 4972
150 Ga0207674_10007529 3300026116 Bacteria 12690
151 Ga0207674_10027799 3300026116 Bacteria 5976
152 Ga0207675_100447988 3300026118 Bacteria 1279
153 Ga0207698_10092371 3300026142 Bacteria 2481
154 Ga0268266_10000024 3300028379 Bacteria 490820
155 Ga0268266_10006897 3300028379 Bacteria 10340
156 Ga0268264_10000243 3300028381 Bacteria 102854
157 Ga0268264_10002376 3300028381 Bacteria 16599
158 Ga0268264_10085482 3300028381 Bacteria 2707
159 Ga0307517_10022806 3300028786 Bacteria 7824
160 Ga0265324_10033610 3300029957 Unclassified 1789
161 Ga0307511_10000680 3300030521 Bacteria 36246
162 Ga0265331_10036925 3300031250 Unclassified 2395
163 Ga0265327_10000010 3300031251 Bacteria 566817
164 Ga0265327_10035470 3300031251 Bacteria 2757
165 Ga0265316_10172824 3300031344 Bacteria 1611
166 Ga0265316_10199532 3300031344 Unclassified 1484
167 Ga0307513_10064950 3300031456 Bacteria 3841
168 Ga0307509_10174572 3300031507 Bacteria 2023
169 Ga0307508_10000413 3300031616 Bacteria 50697
170 Ga0265314_10017418 3300031711 Bacteria 5640
171 Ga0316578_10016424 3300031728 Bacteria 4007
172 Ga0307516_10002360 3300031730 Bacteria 25310
173 Ga0316577_10023109 3300031733 Bacteria 3453
174 Ga0307414_10050772 3300032004 Bacteria 2875
175 Ga0307510_10000406 3300033180 Bacteria 41007
176 Ga0373937_0331346 3300036401 Bacteria 1441
177 Ga0316582_0219055 3300036647 Bacteria 1301
178 Ga0316584_0032635 3300036712 Bacteria 3855
179 Ga0316584_0058003 3300036712 Bacteria 2899
180 Ga0316584_0099078 3300036712 Bacteria 2183
181 Ga0395900_0119520 3300037418 Bacteria 2705
182 Ga0395905_0000011 3300037471 Bacteria 424563
183 Ga0395905_0002077 3300037471 Bacteria 22806
184 Ga0400489_89068 3300039093 Bacteria 2688
185 Ga0436365_1785523 3300039437 Bacteria 13169
186 Ga0451795_0032210 3300041456 Bacteria 3976
187 Ga0451795_1502544 3300041456 Unclassified 1197
188 Ga0451577_0002701 3300042876 Bacteria 20658
189 Ga0451577_0045110 3300042876 Bacteria 3946
190 Ga0466972_0000050 3300044658 Bacteria 118759
191 Ga0466961_0105626 3300044693 Unclassified 1773
192 Ga0453684_0000143 3300044712 Bacteria 315998
193 Ga0453684_0010605 3300044712 Bacteria 15717
194 Ga0453684_0011785 3300044712 Bacteria 14572
195 Ga0453684_0016838 3300044712 Bacteria 11381
196 Ga0453684_0062209 3300044712 Bacteria 4784
197 Ga0453684_0132289 3300044712 Unclassified 2992
198 Ga0466968_0022676 3300044735 Bacteria 2553
199 Ga0466970_0003049 3300044765 Bacteria 8127
200 Ga0466959_0030956 3300045049 Bacteria 3961
201 Ga0451576_0000002 3300045051 Bacteria 1670975
202 Ga0451576_0017135 3300045051 Bacteria 7969
203 Ga0495627_007144 3300046453 Bacteria 4315
204 Ga0495592_0041095 3300046454 Bacteria 3467
205 Ga0495638_0041632 3300046460 Unclassified 2905
206 Ga0495648_0010726 3300046524 Bacteria 6957
207 Ga0495633_0000049 3300046558 Bacteria 156684
208 Ga0495634_0059245 3300046642 Bacteria 2551
209 Ga0495634_0092355 3300046642 Bacteria 1964
210 Ga0495611_0000121 3300046648 Bacteria 56074
211 Ga0495674_0051441 3300047319 Bacteria 3632
212 Ga0495672_0038672 3300047320 Bacteria 2908
213 Ga0495687_000014 3300047443 Bacteria 366896
214 Ga0495684_0033686 3300047471 Unclassified 3929
215 Ga0495686_0000034 3300047472 Bacteria 325038
216 Ga0496101_0083358 3300048904 Bacteria 2367
217 Ga0496121_0000030 3300048924 Bacteria 412079
218 Ga0496126_0014180 3300048929 Bacteria 8067
219 Ga0501297_001328 3300049520 Bacteria 2267
220 Ga0501298_008234 3300049521 Bacteria 1747
221 Ga0501032_0174638 3300049569 Bacteria 1408
222 Ga0501047_0079085 3300049581 Bacteria 3162
223 Ga0501077_0158091 3300049593 Bacteria 1439
224 Ga0501201_000605 3300049651 Bacteria 3335
225 Ga0501202_000325 3300049652 Bacteria 6627
226 Ga0501217_000366 3300049661 Bacteria 7233
227 Ga0501222_001393 3300049662 Bacteria 3382
228 Ga0501235_000331 3300049669 Bacteria 9024
229 Ga0501243_001122 3300049675 Bacteria 3800
230 Ga0501252_000446 3300049682 Bacteria 3140
231 Ga0501259_002133 3300049688 Bacteria 3255
232 Ga0501221_003226 3300049704 Bacteria 2679
233 Ga0501225_0013956 3300049705 Bacteria 2246
234 Ga0501035_0036572 3300049822 Bacteria 4450
235 Ga0501044_0109535 3300049823 Bacteria 2771
236 Ga0501212_003284 3300049851 Bacteria 2020
237 nmdc:mga0k408_112217_c1 3300050493 Bacteria 1612
238 nmdc:mga05p37_41075_c1 3300050507 Bacteria 5679
239 nmdc:mga06r32_22508_c1 3300050510 Bacteria 5826
240 Ga0500644_0000572 3300053088 Bacteria 14318
241 Ga0500646_0001408 3300053090 Bacteria 6379
242 Ga0500646_0006575 3300053090 Bacteria 2957
243 Ga0500583_0002954 3300053092 Bacteria 5241
244 Ga0500651_0097031 3300053093 Bacteria 1811
245 Ga0500651_0113287 3300053093 Bacteria 1653
246 Ga0500652_037680 3300053131 Bacteria 1930
247 Ga0500568_0003862 3300053139 Bacteria 8171
248 Ga0500568_0007228 3300053139 Bacteria 5472
249 Ga0500589_003866 3300053147 Bacteria 5510
250 Ga0500590_005208 3300053148 Bacteria 6240
251 Ga0500622_0000354 3300053156 Bacteria 44739
252 Ga0500622_0000655 3300053156 Bacteria 30835
253 Ga0500622_0002127 3300053156 Bacteria 14751
254 Ga0500633_0000135 3300053160 Bacteria 9737
255 Ga0500645_003030 3300053730 Bacteria 7083
256 2819573360 2818991442 Bacteria 8318214
257 2819587955 2818991444 Bacteria 6968812
258 2819681042 2818991460 Bacteria 7595395
259 2821136773 2821136567 Bacteria 8080116
260 2883072472 2883068021 Bacteria 6192739
261 2884795817 2884791551 Bacteria 8511252
262 2896087605 2896085136 Bacteria 6129793
263 2896112671 2896109856 Bacteria 7140722
264 2904468482 2904467357 Bacteria 8057758
265 2929158022 2929154850 Bacteria 6753285
266 2929923019 2929921140 Bacteria 8649150
267 8003152353 8003151029 Bacteria 8187759
268 JGI24740J21852_10000106
269 SwRhRL2b_contig_1663676
270 JGI25154J39366_1000001
271 rootH2_10092067
272 rootH2_10134670
273 rootL2_10098619
274 rootL2_10105884
275 rootH1_10126167
276 JGI25160J50197_1000809
277 JGI25160J50197_1003018
278 JGI25160J50197_1005014
279 Ga0055535_1001625
280 Ga0055526_1016626
281 Ga0055526_1021147
282 Ga0055528_1000330
283 Ga0055530_10000331
284 Ga0055531_10000133
285 Ga0055531_10000166
286 Ga0065165_1000105
287 Ga0065165_1012048
288 Ga0065704_10070136
289 Ga0065712_10110729
290 Ga0070670_100037547
291 Ga0070680_100002381
292 Ga0070680_100010714
293 Ga0070669_100025075
294 Ga0070669_100087419
295 Ga0070669_100110887
296 Ga0070675_100144336
297 Ga0070675_100188248
298 Ga0070659_100099202
299 Ga0070667_100001551
300 Ga0070667_100119013
301 Ga0070681_10018272
302 Ga0070681_10112668
303 Ga0070685_10145572
304 Ga0070679_100000656
305 Ga0070679_100092357
306 Ga0070672_100008266
307 Ga0070686_100093382
308 Ga0070693_100012187
309 Ga0070665_100000013
310 Ga0070665_100003563
311 Ga0068855_100020736
312 Ga0068855_100170793
313 Ga0068857_100098911
314 Ga0068857_100189560
315 Ga0068854_100225634
316 Ga0068856_100017636
317 Ga0068859_100062859
318 Ga0068860_100000060
319 Ga0068860_100002354
320 Ga0068860_100025213
321 Ga0081540_1010354
322 Ga0075366_10014169
323 Ga0097621_100299368
324 Ga0075431_100003240
325 Ga0097620_100062860
326 Ga0105240_10000037
327 Ga0105240_10000716
328 Ga0105240_10004490
329 Ga0105240_10007731
330 Ga0105240_10025764
331 Ga0105240_10149776
332 Ga0105240_10196636
333 Ga0111539_10150364
334 Ga0114129_10002180
335 Ga0105241_10007905
336 Ga0105237_10001011
337 Ga0105237_10001524
338 Ga0105237_10010675
339 Ga0105237_10029101
340 Ga0105237_10074424
341 Ga0105237_10089082
342 Ga0105237_10208102
343 Ga0105238_10030633
344 Ga0105249_10281597
345 Ga0105239_10000632
346 Ga0105239_10001043
347 Ga0105239_10004354
348 Ga0105239_10009813
349 Ga0157373_10038103
350 Ga0157373_10044872
351 Ga0157373_10099830
352 Ga0157373_10204006
353 Ga0157371_10028450
354 Ga0157371_10038474
355 Ga0157370_10003936
356 Ga0157370_10006313
357 Ga0157369_10053625
358 Ga0157374_10000007
359 Ga0163162_10000934
360 Ga0157372_10002998
361 Ga0157372_10004831
362 Ga0157372_10006930
363 Ga0157372_10030951
364 Ga0157372_10472354
365 Ga0157375_10069194
366 Ga0163163_10033251
367 Ga0157380_10005749
368 Ga0157376_10002586
369 Ga0182005_1000147
370 Ga0213876_10003046
371 Ga0209436_100232
372 Ga0209436_103413
373 Ga0209258_100041
374 Ga0209646_1000002
375 Ga0209026_1000299
376 Ga0209148_1000090
377 Ga0209673_1000034
378 Ga0209130_1001596
379 Ga0209564_1005409
380 Ga0209758_1001095
381 Ga0209758_1009500
382 Ga0209050_1000207
383 Ga0207426_1000030
384 Ga0207426_1000603
385 Ga0207426_1000813
386 Ga0207426_1003003
387 Ga0209257_1000001
388 Ga0207647_10002343
389 Ga0207647_10008644
390 Ga0207654_10002049
391 Ga0207654_10114045
392 Ga0207707_10009630
393 Ga0207707_10104390
394 Ga0207695_10000092
395 Ga0207695_10000862
396 Ga0207695_10004710
397 Ga0207695_10011871
398 Ga0207671_10000025
399 Ga0207671_10001240
400 Ga0207671_10003400
401 Ga0207671_10092426
402 Ga0207660_10000111
403 Ga0207660_10160872
404 Ga0207652_10000460
405 Ga0207652_10042657
406 Ga0207681_10031636
407 Ga0207694_10042335
408 Ga0207659_10072973
409 Ga0207659_10099996
410 Ga0207690_10017946
411 Ga0207669_10104044
412 Ga0207667_10009578
413 Ga0207667_10026924
414 Ga0207667_10143095
415 Ga0207658_10013251
416 Ga0207702_10024835
417 Ga0207674_10007529
418 Ga0207674_10027799
419 Ga0207675_100447988
420 Ga0207698_10092371
421 Ga0268266_10000024
422 Ga0268266_10006897
423 Ga0268264_10000243
424 Ga0268264_10002376
425 Ga0268264_10085482
426 Ga0307517_10022806
427 Ga0265324_10033610
428 Ga0307511_10000680
429 Ga0265331_10036925
430 Ga0265327_10000010
431 Ga0265327_10035470
432 Ga0265316_10172824
433 Ga0265316_10199532
434 Ga0307513_10064950
435 Ga0307509_10174572
436 Ga0307508_10000413
437 Ga0265314_10017418
438 Ga0316578_10016424
439 Ga0307516_10002360
440 Ga0316577_10023109
441 Ga0307414_10050772
442 Ga0307510_10000406
443 Ga0373937_0331346
444 Ga0316582_0219055
445 Ga0316584_0032635
446 Ga0316584_0058003
447 Ga0316584_0099078
448 Ga0395900_0119520
449 Ga0395905_0000011
450 Ga0395905_0002077
451 Ga0400489_89068
452 Ga0436365_1785523
453 Ga0451795_0032210
454 Ga0451795_1502544
455 Ga0451577_0002701
456 Ga0451577_0045110
457 Ga0466972_0000050
458 Ga0466961_0105626
459 Ga0453684_0000143
460 Ga0453684_0010605
461 Ga0453684_0011785
462 Ga0453684_0016838
463 Ga0453684_0062209
464 Ga0453684_0132289
465 Ga0466968_0022676
466 Ga0466970_0003049
467 Ga0466959_0030956
468 Ga0451576_0000002
469 Ga0451576_0017135
470 Ga0495627_007144
471 Ga0495592_0041095
472 Ga0495638_0041632
473 Ga0495648_0010726
474 Ga0495633_0000049
475 Ga0495634_0059245
476 Ga0495634_0092355
477 Ga0495611_0000121
478 Ga0495674_0051441
479 Ga0495672_0038672
480 Ga0495687_000014
481 Ga0495684_0033686
482 Ga0495686_0000034
483 Ga0496101_0083358
484 Ga0496121_0000030
485 Ga0496126_0014180
486 Ga0501297_001328
487 Ga0501298_008234
488 Ga0501032_0174638
489 Ga0501047_0079085
490 Ga0501077_0158091
491 Ga0501201_000605
492 Ga0501202_000325
493 Ga0501217_000366
494 Ga0501222_001393
495 Ga0501235_000331
496 Ga0501243_001122
497 Ga0501252_000446
498 Ga0501259_002133
499 Ga0501221_003226
500 Ga0501225_0013956
501 Ga0501035_0036572
502 Ga0501044_0109535
503 Ga0501212_003284
504 nmdc:mga0k408_112217_c1
505 nmdc:mga05p37_41075_c1
506 nmdc:mga06r32_22508_c1
507 Ga0500644_0000572
508 Ga0500646_0001408
509 Ga0500646_0006575
510 Ga0500583_0002954
511 Ga0500651_0097031
512 Ga0500651_0113287
513 Ga0500652_037680
514 Ga0500568_0003862
515 Ga0500568_0007228
516 Ga0500589_003866
517 Ga0500590_005208
518 Ga0500622_0000354
519 Ga0500622_0000655
520 Ga0500622_0002127
521 Ga0500633_0000135
522 Ga0500645_003030
523 2819573360
524 2819587955
525 2819681042
526 2821136773
527 2883072472
528 2884795817
529 2896087605
530 2896112671
531 2904468482
532 2929158022
533 2929923019
534 8003152353

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

89

444

0.91

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

120

268

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gb3-assembly3.cif.gz_F crystal structure of aspartate aminotransferase (tm1698) from thermotoga maritima at 2.50 a resolution 0.9632 3 394
2gb3-assembly3.cif.gz_F crystal structure of aspartate aminotransferase (tm1698) from thermotoga maritima at 2.50 a resolution 0.9583 3 394
1o4s-assembly1.cif.gz_A crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution 0.9447 4 392
1o4s-assembly1.cif.gz_A crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution 0.9398 4 392
1j32-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9394 2 392
ID Description Score Start End Superfamily
2gb3B02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9604 45 282 3.40.640.10
2gb3B02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9564 45 282 3.40.640.10
af_A0A0R0HS10_77_301_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.956 62 283 3.40.640.10
1j32B02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9516 62 282 3.40.640.10
1gd9A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9466 62 281 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A524H2H3-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9934 163 395 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A7V5H4Y4-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9927 238 395 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A4Z0P8F8-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9915 1 396 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A1F3EF76-F1-model_v4 Aspartate aminotransferase 0.99 128 395 GO:0006520
GO:0008483
GO:0009058
GO:0030170
AF-A0A4Z0P8F8-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9865 1 396 GO:0006520
GO:0008483
GO:0009058
GO:0030170

Map