F373815

General Info

Members Datasets Scaffolds Average Seq Length
266 156 264 352

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100155854|Ga0070683_1001558541
Length 384
Sequence MLTFNADRRVEATLEAPTPHAHNTEHPPSMKATIAVLAGDGIGPEVISEGLRCLEAVGAAFGHDFAFNQLPFGGAAIDALGDPLPSSTLQPCMAADAVLLGAIGGPKWSAPDAKVRPEQGLLRLRKELGVYANLRPVKLHPCLANASTLKPEVLEGVDLIFARELTGGIYFGEKTRTPQQATDLCAYSVTEVERITRVAAKLAQQRRRKVTSIDKSNVLETSRLWREVTTRVIAKEFPDVTLDHMLVDSAAMHLIRRPRDFDVLVTENMFGDILTDEASMLAGSLGLLPSASLGDGKRGLYEPIHGSAPDIAGRGIANPVGTLMSVAMLLRYSLQLTKEADAVEAAVSTALENGARTPDIVTPGQQPLSTRQMGDAVLAALNRG

Samples

Sample ID Description Type Environment
1 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
2 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
80 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
82 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
83 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
90 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
91 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
92 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
93 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
94 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
95 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
149 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
150 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.63
Nodule 0
Rhizoplane 1.88
Rhizosphere 86.84
Stem 0
Stem Tuber 0
Unclassified 8.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10362689 3300005327 Bacteria 1241
2 Ga0070683_100052518 3300005329 Bacteria 3776
3 Ga0070683_100155854 3300005329 Bacteria 2166
4 Ga0070666_10195290 3300005335 Bacteria 1423
5 Ga0070680_100012913 3300005336 Bacteria 6497
6 Ga0070680_100060946 3300005336 Bacteria 3088
7 Ga0070680_100150171 3300005336 Bacteria 1956
8 Ga0070691_10003506 3300005341 Bacteria 7072
9 Ga0070661_100029897 3300005344 Bacteria 3934
10 Ga0070671_100000631 3300005355 Bacteria 25121
11 Ga0070667_100000028 3300005367 Bacteria 180376
12 Ga0070667_100114527 3300005367 Bacteria 2341
13 Ga0070667_100198059 3300005367 Bacteria 1782
14 Ga0070714_100028739 3300005435 Bacteria 4617
15 Ga0070711_100116171 3300005439 Bacteria 1971
16 Ga0070681_10020449 3300005458 Bacteria 6635
17 Ga0070681_10022533 3300005458 Bacteria 6325
18 Ga0070681_10026775 3300005458 Bacteria 5797
19 Ga0070681_10029415 3300005458 Bacteria 5517
20 Ga0070681_10042117 3300005458 Bacteria 4577
21 Ga0070679_100006068 3300005530 Bacteria 11242
22 Ga0070679_100011283 3300005530 Bacteria 8519
23 Ga0070679_100019559 3300005530 Bacteria 6588
24 Ga0070679_100165874 3300005530 Bacteria 2182
25 Ga0070684_100358986 3300005535 Bacteria 1341
26 Ga0068853_100000633 3300005539 Bacteria 24186
27 Ga0068853_100164380 3300005539 Bacteria 2005
28 Ga0070686_100107748 3300005544 Bacteria 1893
29 Ga0070665_100005943 3300005548 Bacteria 12497
30 Ga0070665_100019234 3300005548 Bacteria 6852
31 Ga0070665_100038592 3300005548 Bacteria 4801
32 Ga0070665_100247379 3300005548 Bacteria 1783
33 Ga0068855_100000672 3300005563 Bacteria 41718
34 Ga0068855_100001659 3300005563 Bacteria 27835
35 Ga0068855_100003554 3300005563 Bacteria 19058
36 Ga0068855_100058563 3300005563 Bacteria 4511
37 Ga0068855_100135024 3300005563 Bacteria 2815
38 Ga0068857_100002536 3300005577 Bacteria 14951
39 Ga0068857_100156221 3300005577 Bacteria 2068
40 Ga0068856_100093635 3300005614 Bacteria 2990
41 Ga0068852_100016712 3300005616 Bacteria 5732
42 Ga0068859_100000720 3300005617 Bacteria 33292
43 Ga0068859_100468423 3300005617 Bacteria 1356
44 Ga0068863_100002947 3300005841 Bacteria 16814
45 Ga0068863_100004460 3300005841 Bacteria 13801
46 Ga0068863_100022276 3300005841 Bacteria 6049
47 Ga0068858_100000571 3300005842 Bacteria 38529
48 Ga0068858_100153207 3300005842 Bacteria 2168
49 Ga0068860_100006512 3300005843 Bacteria 11720
50 Ga0068862_100040944 3300005844 Bacteria 3941
51 Ga0070716_100034182 3300006173 Bacteria 2785
52 Ga0097621_100040941 3300006237 Bacteria 3727
53 Ga0068871_100050551 3300006358 Bacteria 3363
54 Ga0097620_100000720 3300006931 Bacteria 33292
55 Ga0097620_100468418 3300006931 Bacteria 1356
56 Ga0105240_10000307 3300009093 Bacteria 94509
57 Ga0105240_10035606 3300009093 Bacteria 6414
58 Ga0105240_10039061 3300009093 Bacteria 6081
59 Ga0105240_10124912 3300009093 Bacteria 3094
60 Ga0105240_10207829 3300009093 Bacteria 2289
61 Ga0105240_10222212 3300009093 Bacteria 2200
62 Ga0105240_10252573 3300009093 Bacteria 2038
63 Ga0105240_10274048 3300009093 Bacteria 1941
64 Ga0105247_10000598 3300009101 Bacteria 29258
65 Ga0105247_10020430 3300009101 Bacteria 3982
66 Ga0105247_10164554 3300009101 Bacteria 1471
67 Ga0105237_10054943 3300009545 Bacteria 3989
68 Ga0105238_10001810 3300009551 Bacteria 21419
69 Ga0105238_10006647 3300009551 Bacteria 11528
70 Ga0105238_10059157 3300009551 Bacteria 3840
71 Ga0105238_10239983 3300009551 Bacteria 1790
72 Ga0105249_10009642 3300009553 Bacteria 8462
73 Ga0105249_10069609 3300009553 Bacteria 3248
74 Ga0105239_10006662 3300010375 Bacteria 13354
75 Ga0105239_10022861 3300010375 Bacteria 6893
76 Ga0105239_10137268 3300010375 Bacteria 2723
77 Ga0157370_10000658 3300013104 Bacteria 42939
78 Ga0157370_10021388 3300013104 Bacteria 6446
79 Ga0157370_10266290 3300013104 Bacteria 1583
80 Ga0157369_10009107 3300013105 Bacteria 11359
81 Ga0157369_10027837 3300013105 Bacteria 6262
82 Ga0157369_10050603 3300013105 Bacteria 4499
83 Ga0157372_10007390 3300013307 Bacteria 11683
84 Ga0157372_10024948 3300013307 Bacteria 6498
85 Ga0163163_10006517 3300014325 Bacteria 10218
86 Ga0157379_10014619 3300014968 Bacteria 6884
87 Ga0157379_10057915 3300014968 Bacteria 3463
88 Ga0207710_10000550 3300025900 Bacteria 22540
89 Ga0207710_10010969 3300025900 Bacteria 3817
90 Ga0207707_10000054 3300025912 Bacteria 115337
91 Ga0207707_10000565 3300025912 Bacteria 37586
92 Ga0207707_10005189 3300025912 Bacteria 11416
93 Ga0207707_10156665 3300025912 Bacteria 1992
94 Ga0207695_10001074 3300025913 Bacteria 47791
95 Ga0207695_10010034 3300025913 Bacteria 11629
96 Ga0207695_10022118 3300025913 Bacteria 7231
97 Ga0207695_10147988 3300025913 Bacteria 2290
98 Ga0207695_10164966 3300025913 Bacteria 2144
99 Ga0207695_10206711 3300025913 Bacteria 1876
100 Ga0207695_10208722 3300025913 Bacteria 1865
101 Ga0207660_10020365 3300025917 Bacteria 4450
102 Ga0207660_10020440 3300025917 Bacteria 4443
103 Ga0207649_10012990 3300025920 Bacteria 4640
104 Ga0207652_10010599 3300025921 Bacteria 7419
105 Ga0207652_10017959 3300025921 Bacteria 5796
106 Ga0207652_10278321 3300025921 Bacteria 1509
107 Ga0207694_10003146 3300025924 Bacteria 13193
108 Ga0207694_10020331 3300025924 Bacteria 5021
109 Ga0207650_10233423 3300025925 Bacteria 1484
110 Ga0207644_10001716 3300025931 Bacteria 14158
111 Ga0207665_10031700 3300025939 Bacteria 3499
112 Ga0207661_10002260 3300025944 Bacteria 13277
113 Ga0207667_10003176 3300025949 Bacteria 20327
114 Ga0207667_10008845 3300025949 Bacteria 11919
115 Ga0207667_10011095 3300025949 Bacteria 10490
116 Ga0207667_10034789 3300025949 Bacteria 5408
117 Ga0207667_10136990 3300025949 Bacteria 2521
118 Ga0207712_10114410 3300025961 Bacteria 2029
119 Ga0207712_10154937 3300025961 Bacteria 1774
120 Ga0207658_10001088 3300025986 Bacteria 21940
121 Ga0207658_10002500 3300025986 Bacteria 13386
122 Ga0207703_10001111 3300026035 Bacteria 25457
123 Ga0207703_10011830 3300026035 Bacteria 6795
124 Ga0207703_10130555 3300026035 Bacteria 2169
125 Ga0207639_10000507 3300026041 Bacteria 26971
126 Ga0207639_10068077 3300026041 Bacteria 2773
127 Ga0207678_10115261 3300026067 Bacteria 2292
128 Ga0207702_10012107 3300026078 Bacteria 7175
129 Ga0207641_10000083 3300026088 Bacteria 134703
130 Ga0207641_10015568 3300026088 Bacteria 6232
131 Ga0207641_10018270 3300026088 Bacteria 5747
132 Ga0207674_10000166 3300026116 Bacteria 79149
133 Ga0207698_10205785 3300026142 Bacteria 1766
134 Ga0268266_10000632 3300028379 Bacteria 47843
135 Ga0268266_10008266 3300028379 Bacteria 9273
136 Ga0268266_10018880 3300028379 Bacteria 5874
137 Ga0268266_10102020 3300028379 Bacteria 2530
138 Ga0268265_10019303 3300028380 Bacteria 4735
139 Ga0268265_10141779 3300028380 Bacteria 2013
140 Ga0268264_10000179 3300028381 Bacteria 134401
141 Ga0268264_10299054 3300028381 Bacteria 1514
142 Ga0268264_10440712 3300028381 Bacteria 1260
143 Ga0265334_10024037 3300028573 Bacteria 2474
144 Ga0307515_10220420 3300028794 Bacteria 1717
145 Ga0307511_10014625 3300030521 Bacteria 7634
146 Ga0307511_10015811 3300030521 Bacteria 7298
147 Ga0265339_10108614 3300031249 Bacteria 1438
148 Ga0265331_10002695 3300031250 Bacteria 11826
149 Ga0307509_10000001 3300031507 Bacteria 629324
150 Ga0265342_10147652 3300031712 Bacteria 1308
151 Ga0307410_10019203 3300031852 Bacteria 4152
152 Ga0307407_10029817 3300031903 Bacteria 2935
153 Ga0307409_100058680 3300031995 Bacteria 2990
154 Ga0307411_10003714 3300032005 Bacteria 7155
155 Ga0307510_10000013 3300033180 Bacteria 274569
156 Ga0307510_10030319 3300033180 Bacteria 6133
157 Ga0373934_0000382 3300035086 Bacteria 15570
158 Ga0373936_0002303 3300035113 Bacteria 7147
159 Ga0373936_0034562 3300035113 Bacteria 2009
160 Ga0373953_0003341 3300035117 Bacteria 4979
161 Ga0373954_0009414 3300035118 Bacteria 4296
162 Ga0373955_0024554 3300035172 Bacteria 3084
163 Ga0373933_0015495 3300035724 Bacteria 4251
164 Ga0373937_0008823 3300036401 Bacteria 8746
165 Ga0373937_0062479 3300036401 Bacteria 3424
166 Ga0373937_0390492 3300036401 Bacteria 1320
167 Ga0395905_0000875 3300037471 Bacteria 39294
168 Ga0237816_00141 3300039145 Bacteria 5624
169 Ga0436365_1719264 3300039437 Bacteria 2482
170 Ga0436363_1423519 3300039450 Bacteria 4016
171 Ga0436362_0761498 3300039453 Bacteria 2193
172 Ga0451802_1181743 3300041460 Bacteria 3575
173 Ga0450920_004426 3300042122 Bacteria 2468
174 Ga0450923_000072 3300042125 Bacteria 8270
175 Ga0450896_001823 3300042133 Bacteria 2686
176 Ga0450908_000661 3300042184 Bacteria 6615
177 Ga0451577_0154974 3300042876 Bacteria 2061
178 Ga0466969_0005214 3300044656 Bacteria 6914
179 Ga0466969_0014774 3300044656 Bacteria 4102
180 Ga0466969_0017946 3300044656 Bacteria 3691
181 Ga0466966_0002529 3300044684 Bacteria 11978
182 Ga0466961_0005805 3300044693 Bacteria 7819
183 Ga0466964_0001564 3300044706 Bacteria 7877
184 Ga0453684_0000007 3300044712 Bacteria 1301482
185 Ga0453684_0000437 3300044712 Bacteria 169900
186 Ga0453684_0012924 3300044712 Bacteria 13673
187 Ga0466971_0009475 3300044719 Bacteria 4251
188 Ga0466970_0006526 3300044765 Bacteria 5831
189 Ga0466959_0015039 3300045049 Bacteria 5637
190 Ga0451576_0000081 3300045051 Bacteria 239875
191 Ga0451576_0072288 3300045051 Bacteria 3590
192 Ga0495632_0021057 3300046519 Bacteria 3519
193 Ga0495640_0199398 3300046533 Bacteria 1269
194 Ga0495621_0001019 3300046539 Bacteria 7177
195 Ga0495647_0004383 3300046681 Bacteria 4585
196 Ga0495658_0034372 3300046683 Bacteria 2782
197 Ga0495687_084625 3300047443 Bacteria 1232
198 Ga0495675_0152004 3300047444 Bacteria 1430
199 Ga0495684_0015732 3300047471 Bacteria 5822
200 Ga0496102_0173011 3300048905 Bacteria 2033
201 Ga0496104_0047453 3300048907 Bacteria 4048
202 Ga0496112_0166486 3300048915 Bacteria 2170
203 Ga0496115_0068236 3300048918 Bacteria 2879
204 Ga0496116_0005303 3300048919 Bacteria 12016
205 Ga0496117_0000057 3300048920 Bacteria 268246
206 Ga0496118_0000028 3300048921 Bacteria 366490
207 Ga0496119_0002197 3300048922 Bacteria 21808
208 Ga0496119_0022872 3300048922 Bacteria 4454
209 Ga0496120_0001692 3300048923 Bacteria 25282
210 Ga0496120_0006140 3300048923 Bacteria 9316
211 Ga0496121_0001748 3300048924 Bacteria 35482
212 Ga0496125_0000926 3300048928 Bacteria 46052
213 Ga0496125_0004380 3300048928 Bacteria 16341
214 Ga0496125_0013303 3300048928 Bacteria 8094
215 Ga0496126_0009889 3300048929 Bacteria 10082
216 Ga0496126_0023307 3300048929 Bacteria 5999
217 Ga0496126_0040582 3300048929 Bacteria 4313
218 Ga0501032_0057187 3300049569 Bacteria 2621
219 Ga0501033_0009974 3300049570 Bacteria 7293
220 Ga0501033_0045180 3300049570 Bacteria 3279
221 Ga0501036_0019917 3300049572 Bacteria 5632
222 Ga0501038_0000506 3300049574 Bacteria 34206
223 Ga0501039_0007717 3300049575 Bacteria 8214
224 Ga0501040_0001231 3300049576 Bacteria 16284
225 Ga0501040_0002502 3300049576 Bacteria 11839
226 Ga0501041_0000142 3300049577 Bacteria 31415
227 Ga0501041_0003920 3300049577 Bacteria 8579
228 Ga0501042_0066759 3300049578 Bacteria 2571
229 Ga0501046_0042010 3300049580 Bacteria 3646
230 Ga0501048_0007281 3300049582 Bacteria 8389
231 Ga0501048_0015856 3300049582 Bacteria 5561
232 Ga0501071_0000132 3300049587 Bacteria 30299
233 Ga0501071_0022667 3300049587 Bacteria 4379
234 Ga0501072_0002731 3300049588 Bacteria 13246
235 Ga0501074_0063454 3300049590 Bacteria 2661
236 Ga0501075_0000639 3300049591 Bacteria 21426
237 Ga0501076_0000346 3300049592 Bacteria 28553
238 Ga0501076_0012876 3300049592 Bacteria 6259
239 Ga0501077_0000511 3300049593 Bacteria 23535
240 Ga0501077_0066141 3300049593 Bacteria 2293
241 Ga0501079_0000525 3300049741 Bacteria 24944
242 Ga0501079_0036761 3300049741 Bacteria 3771
243 Ga0501080_0110434 3300049742 Bacteria 2548
244 Ga0501081_0000030 3300049743 Bacteria 52652
245 Ga0501081_0031148 3300049743 Bacteria 3614
246 Ga0501035_0006743 3300049822 Bacteria 10736
247 Ga0501035_0026261 3300049822 Bacteria 5330
248 Ga0501045_0001743 3300049824 Bacteria 14669
249 Ga0501045_0011687 3300049824 Bacteria 6166
250 Ga0501045_0163873 3300049824 Bacteria 1655
251 Ga0495619_0057936 3300053085 Bacteria 2571
252 Ga0500651_0000106 3300053093 Bacteria 51110
253 Ga0500556_0000353 3300053104 Bacteria 34276
254 Ga0500568_0009161 3300053139 Bacteria 4721
255 Ga0500616_0000016 3300053153 Bacteria 627087
256 Ga0500616_0013664 3300053153 Bacteria 4703
257 Ga0500637_0011753 3300053178 Bacteria 4538
258 Ga0500637_0030570 3300053178 Bacteria 2998
259 Ga0501084_0022521 3300054114 Bacteria 5258
260 Ga0501084_0034821 3300054114 Bacteria 4210
261 Ga0501084_0117156 3300054114 Bacteria 2240
262 Ga0501082_0001960 3300060353 Bacteria 18121
263 Ga0466962_0000083 3300061719 Bacteria 38031
264 Ga0530510_0000666 3300061734 Bacteria 22261

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036401 Ga0373937_0390492 Ga0373937_0390492_262_1293 308
2 3300049824 Ga0501045_0163873 Ga0501045_0163873_19_957 308
3 3300048922 Ga0496119_0022872 Ga0496119_0022872_611_1678 323
4 3300048923 Ga0496120_0006140 Ga0496120_0006140_374_1441 323
5 3300048928 Ga0496125_0013303 Ga0496125_0013303_3222_4289 323
6 3300044712 Ga0453684_0000437 Ga0453684_0000437_116879_117967 328
7 3300045051 Ga0451576_0000081 Ga0451576_0000081_51934_53022 328
8 3300033180 Ga0307510_10000013 Ga0307510_1000001395 329
9 3300048905 Ga0496102_0173011 Ga0496102_0173011_433_1500 329
10 3300048919 Ga0496116_0005303 Ga0496116_0005303_5773_6840 329
11 3300048920 Ga0496117_0000057 Ga0496117_0000057_210131_211198 329
12 3300048921 Ga0496118_0000028 Ga0496118_0000028_163961_165028 329
13 3300048929 Ga0496126_0040582 Ga0496126_0040582_2153_3220 329
14 3300005367 Ga0070667_100198059 Ga0070667_1001980592 330
15 3300005539 Ga0068853_100164380 Ga0068853_1001643802 330
16 3300005548 Ga0070665_100019234 Ga0070665_1000192345 330
17 3300005617 Ga0068859_100468423 Ga0068859_1004684231 330
18 3300005841 Ga0068863_100002947 Ga0068863_10000294712 330
19 3300005843 Ga0068860_100006512 Ga0068860_1000065127 330
20 3300005844 Ga0068862_100040944 Ga0068862_1000409443 330
21 3300006931 Ga0097620_100468418 Ga0097620_1004684181 330
22 3300009093 Ga0105240_10124912 Ga0105240_101249123 330
23 3300009093 Ga0105240_10207829 Ga0105240_102078293 330
24 3300009101 Ga0105247_10164554 Ga0105247_101645542 330
25 3300025913 Ga0207695_10147988 Ga0207695_101479881 330
26 3300025913 Ga0207695_10206711 Ga0207695_102067111 330
27 3300025925 Ga0207650_10233423 Ga0207650_102334231 330
28 3300026035 Ga0207703_10011830 Ga0207703_100118303 330
29 3300026041 Ga0207639_10068077 Ga0207639_100680772 330
30 3300026067 Ga0207678_10115261 Ga0207678_101152611 330
31 3300026088 Ga0207641_10000083 Ga0207641_10000083104 330
32 3300028379 Ga0268266_10008266 Ga0268266_100082663 330
33 3300028380 Ga0268265_10019303 Ga0268265_100193031 330
34 3300028381 Ga0268264_10000179 Ga0268264_10000179102 330
35 3300046519 Ga0495632_0021057 Ga0495632_0021057_2277_3344 330
36 3300047443 Ga0495687_084625 Ga0495687_084625_31_1098 330
37 3300048928 Ga0496125_0000926 Ga0496125_0000926_30822_31889 330
38 3300048929 Ga0496126_0023307 Ga0496126_0023307_2591_3658 330
39 3300028573 Ga0265334_10024037 Ga0265334_100240373 333
40 3300031250 Ga0265331_10002695 Ga0265331_100026952 333
41 3300005458 Ga0070681_10042117 Ga0070681_100421172 336
42 3300009551 Ga0105238_10239983 Ga0105238_102399831 336
43 3300025912 Ga0207707_10156665 Ga0207707_101566651 336
44 3300031712 Ga0265342_10147652 Ga0265342_101476522 336
45 3300035086 Ga0373934_0000382 Ga0373934_0000382_9617_10696 337
46 3300035117 Ga0373953_0003341 Ga0373953_0003341_2892_3971 337
47 3300035118 Ga0373954_0009414 Ga0373954_0009414_1645_2724 337
48 3300035172 Ga0373955_0024554 Ga0373955_0024554_1938_3017 337
49 3300035724 Ga0373933_0015495 Ga0373933_0015495_325_1404 337
50 3300036401 Ga0373937_0008823 Ga0373937_0008823_3170_4249 337
51 3300047444 Ga0495675_0152004 Ga0495675_0152004_179_1258 337
52 3300047471 Ga0495684_0015732 Ga0495684_0015732_608_1681 337
53 3300006173 Ga0070716_100034182 Ga0070716_1000341822 341
54 3300025939 Ga0207665_10031700 Ga0207665_100317003 341
55 iso_pu_bacteria 2524614729 2525556747 341
56 iso_pu_bacteria 2627854209 2630648343 341
57 3300028380 Ga0268265_10141779 Ga0268265_101417793 342
58 3300039453 Ga0436362_0761498 Ga0436362_0761498_673_1725 343
59 3300053093 Ga0500651_0000106 Ga0500651_0000106_5514_6581 343
60 3300037471 Ga0395905_0000875 Ga0395905_0000875_5050_6120 344
61 3300042122 Ga0450920_004426 Ga0450920_004426_1210_2268 344
62 3300042125 Ga0450923_000072 Ga0450923_000072_2231_3289 344
63 3300042133 Ga0450896_001823 Ga0450896_001823_447_1505 344
64 3300042184 Ga0450908_000661 Ga0450908_000661_4881_5939 344
65 3300044712 Ga0453684_0000007 Ga0453684_0000007_165256_166311 344
66 3300046681 Ga0495647_0004383 Ga0495647_0004383_1009_2067 344
67 3300046683 Ga0495658_0034372 Ga0495658_0034372_1680_2738 344
68 3300005539 Ga0068853_100000633 Ga0068853_10000063312 345
69 3300005548 Ga0070665_100038592 Ga0070665_1000385924 345
70 3300005563 Ga0068855_100003554 Ga0068855_10000355412 345
71 3300005577 Ga0068857_100156221 Ga0068857_1001562212 345
72 3300005841 Ga0068863_100022276 Ga0068863_1000222765 345
73 3300009545 Ga0105237_10054943 Ga0105237_100549432 345
74 3300009553 Ga0105249_10069609 Ga0105249_100696093 345
75 3300010375 Ga0105239_10006662 Ga0105239_1000666211 345
76 3300025949 Ga0207667_10003176 Ga0207667_100031766 345
77 3300025961 Ga0207712_10114410 Ga0207712_101144103 345
78 3300026041 Ga0207639_10000507 Ga0207639_1000050712 345
79 3300026088 Ga0207641_10018270 Ga0207641_100182705 345
80 3300028379 Ga0268266_10018880 Ga0268266_100188803 345
81 3300028794 Ga0307515_10220420 Ga0307515_102204201 345
82 3300031852 Ga0307410_10019203 Ga0307410_100192034 345
83 3300031903 Ga0307407_10029817 Ga0307407_100298172 345
84 3300031995 Ga0307409_100058680 Ga0307409_1000586803 345
85 3300032005 Ga0307411_10003714 Ga0307411_100037147 345
86 3300041460 Ga0451802_1181743 Ga0451802_1181743_1749_2834 345
87 3300045051 Ga0451576_0072288 Ga0451576_0072288_87_1145 345
88 3300046533 Ga0495640_0199398 Ga0495640_0199398_139_1197 345
89 3300049569 Ga0501032_0057187 Ga0501032_0057187_690_1751 345
90 3300049570 Ga0501033_0009974 Ga0501033_0009974_6168_7229 345
91 3300049570 Ga0501033_0045180 Ga0501033_0045180_250_1311 345
92 3300049572 Ga0501036_0019917 Ga0501036_0019917_2511_3572 345
93 3300049574 Ga0501038_0000506 Ga0501038_0000506_20567_21628 345
94 3300049575 Ga0501039_0007717 Ga0501039_0007717_129_1190 345
95 3300049576 Ga0501040_0001231 Ga0501040_0001231_12841_13902 345
96 3300049576 Ga0501040_0002502 Ga0501040_0002502_5097_6158 345
97 3300049577 Ga0501041_0000142 Ga0501041_0000142_11754_12815 345
98 3300049577 Ga0501041_0003920 Ga0501041_0003920_2211_3272 345
99 3300049578 Ga0501042_0066759 Ga0501042_0066759_982_2043 345
100 3300049580 Ga0501046_0042010 Ga0501046_0042010_76_1137 345
101 3300049582 Ga0501048_0007281 Ga0501048_0007281_4899_5960 345
102 3300049582 Ga0501048_0015856 Ga0501048_0015856_2365_3426 345
103 3300049587 Ga0501071_0000132 Ga0501071_0000132_17002_18063 345
104 3300049587 Ga0501071_0022667 Ga0501071_0022667_2719_3780 345
105 3300049588 Ga0501072_0002731 Ga0501072_0002731_307_1368 345
106 3300049590 Ga0501074_0063454 Ga0501074_0063454_313_1374 345
107 3300049591 Ga0501075_0000639 Ga0501075_0000639_2036_3097 345
108 3300049592 Ga0501076_0000346 Ga0501076_0000346_19145_20206 345
109 3300049592 Ga0501076_0012876 Ga0501076_0012876_183_1244 345
110 3300049593 Ga0501077_0000511 Ga0501077_0000511_10372_11433 345
111 3300049593 Ga0501077_0066141 Ga0501077_0066141_107_1168 345
112 3300049741 Ga0501079_0000525 Ga0501079_0000525_12369_13430 345
113 3300049741 Ga0501079_0036761 Ga0501079_0036761_27_1088 345
114 3300049742 Ga0501080_0110434 Ga0501080_0110434_484_1545 345
115 3300049743 Ga0501081_0000030 Ga0501081_0000030_21714_22775 345
116 3300049743 Ga0501081_0031148 Ga0501081_0031148_100_1161 345
117 3300049822 Ga0501035_0006743 Ga0501035_0006743_8488_9549 345
118 3300049822 Ga0501035_0026261 Ga0501035_0026261_3396_4457 345
119 3300049824 Ga0501045_0001743 Ga0501045_0001743_12870_13931 345
120 3300049824 Ga0501045_0011687 Ga0501045_0011687_2570_3631 345
121 3300053085 Ga0495619_0057936 Ga0495619_0057936_230_1288 345
122 3300054114 Ga0501084_0022521 Ga0501084_0022521_2814_3875 345
123 3300054114 Ga0501084_0034821 Ga0501084_0034821_851_1912 345
124 3300060353 Ga0501082_0001960 Ga0501082_0001960_6055_7116 345
125 3300061734 Ga0530510_0000666 Ga0530510_0000666_10201_11262 345
126 3300005367 Ga0070667_100000028 Ga0070667_100000028153 346
127 3300009101 Ga0105247_10020430 Ga0105247_100204303 346
128 3300025986 Ga0207658_10001088 Ga0207658_100010889 346
129 3300031507 Ga0307509_10000001 Ga0307509_10000001140 346
130 3300039145 Ga0237816_00141 Ga0237816_00141_1523_2611 346
131 3300042876 Ga0451577_0154974 Ga0451577_0154974_975_2036 346
132 3300044656 Ga0466969_0017946 Ga0466969_0017946_2065_3129 346
133 3300046539 Ga0495621_0001019 Ga0495621_0001019_4505_5569 346
134 3300053139 Ga0500568_0009161 Ga0500568_0009161_3430_4494 346
135 3300053153 Ga0500616_0013664 Ga0500616_0013664_1597_2661 346
136 3300005329 Ga0070683_100155854 Ga0070683_1001558541 347
137 3300005335 Ga0070666_10195290 Ga0070666_101952902 347
138 3300005336 Ga0070680_100060946 Ga0070680_1000609463 347
139 3300005336 Ga0070680_100150171 Ga0070680_1001501712 347
140 3300005355 Ga0070671_100000631 Ga0070671_10000063112 347
141 3300005367 Ga0070667_100114527 Ga0070667_1001145272 347
142 3300005439 Ga0070711_100116171 Ga0070711_1001161712 347
143 3300005458 Ga0070681_10020449 Ga0070681_100204494 347
144 3300005458 Ga0070681_10022533 Ga0070681_100225333 347
145 3300005458 Ga0070681_10026775 Ga0070681_100267754 347
146 3300005530 Ga0070679_100011283 Ga0070679_1000112835 347
147 3300005530 Ga0070679_100019559 Ga0070679_1000195594 347
148 3300005530 Ga0070679_100165874 Ga0070679_1001658742 347
149 3300005535 Ga0070684_100358986 Ga0070684_1003589862 347
150 3300005544 Ga0070686_100107748 Ga0070686_1001077482 347
151 3300005548 Ga0070665_100005943 Ga0070665_1000059435 347
152 3300005548 Ga0070665_100247379 Ga0070665_1002473792 347
153 3300005563 Ga0068855_100000672 Ga0068855_1000006724 347
154 3300005563 Ga0068855_100001659 Ga0068855_1000016592 347
155 3300005563 Ga0068855_100058563 Ga0068855_1000585634 347
156 3300005617 Ga0068859_100000720 Ga0068859_10000072020 347
157 3300005841 Ga0068863_100004460 Ga0068863_10000446012 347
158 3300005842 Ga0068858_100000571 Ga0068858_10000057122 347
159 3300005842 Ga0068858_100153207 Ga0068858_1001532074 347
160 3300006237 Ga0097621_100040941 Ga0097621_1000409413 347
161 3300006358 Ga0068871_100050551 Ga0068871_1000505512 347
162 3300006931 Ga0097620_100000720 Ga0097620_10000072015 347
163 3300009093 Ga0105240_10000307 Ga0105240_1000030755 347
164 3300009093 Ga0105240_10035606 Ga0105240_100356063 347
165 3300009093 Ga0105240_10039061 Ga0105240_100390614 347
166 3300009093 Ga0105240_10222212 Ga0105240_102222122 347
167 3300009093 Ga0105240_10252573 Ga0105240_102525732 347
168 3300009093 Ga0105240_10274048 Ga0105240_102740482 347
169 3300009101 Ga0105247_10000598 Ga0105247_1000059817 347
170 3300009551 Ga0105238_10001810 Ga0105238_1000181016 347
171 3300009551 Ga0105238_10059157 Ga0105238_100591573 347
172 3300009553 Ga0105249_10009642 Ga0105249_100096421 347
173 3300010375 Ga0105239_10137268 Ga0105239_101372681 347
174 3300013104 Ga0157370_10000658 Ga0157370_100006584 347
175 3300013104 Ga0157370_10266290 Ga0157370_102662902 347
176 3300013105 Ga0157369_10027837 Ga0157369_100278374 347
177 3300013105 Ga0157369_10050603 Ga0157369_100506035 347
178 3300013307 Ga0157372_10024948 Ga0157372_100249485 347
179 3300014325 Ga0163163_10006517 Ga0163163_100065173 347
180 3300014968 Ga0157379_10014619 Ga0157379_100146198 347
181 3300014968 Ga0157379_10057915 Ga0157379_100579152 347
182 3300025900 Ga0207710_10000550 Ga0207710_1000055016 347
183 3300025900 Ga0207710_10010969 Ga0207710_100109693 347
184 3300025912 Ga0207707_10000054 Ga0207707_1000005467 347
185 3300025912 Ga0207707_10005189 Ga0207707_100051892 347
186 3300025913 Ga0207695_10001074 Ga0207695_1000107440 347
187 3300025913 Ga0207695_10022118 Ga0207695_100221184 347
188 3300025913 Ga0207695_10164966 Ga0207695_101649663 347
189 3300025913 Ga0207695_10208722 Ga0207695_102087222 347
190 3300025917 Ga0207660_10020440 Ga0207660_100204402 347
191 3300025921 Ga0207652_10010599 Ga0207652_100105994 347
192 3300025921 Ga0207652_10278321 Ga0207652_102783212 347
193 3300025924 Ga0207694_10020331 Ga0207694_100203315 347
194 3300025931 Ga0207644_10001716 Ga0207644_1000171612 347
195 3300025949 Ga0207667_10011095 Ga0207667_100110954 347
196 3300025949 Ga0207667_10034789 Ga0207667_100347895 347
197 3300025949 Ga0207667_10136990 Ga0207667_101369902 347
198 3300025961 Ga0207712_10154937 Ga0207712_101549372 347
199 3300025986 Ga0207658_10002500 Ga0207658_100025002 347
200 3300026035 Ga0207703_10001111 Ga0207703_1000111116 347
201 3300026035 Ga0207703_10130555 Ga0207703_101305552 347
202 3300026088 Ga0207641_10015568 Ga0207641_100155684 347
203 3300028379 Ga0268266_10000632 Ga0268266_1000063238 347
204 3300028379 Ga0268266_10102020 Ga0268266_101020202 347
205 3300028381 Ga0268264_10299054 Ga0268264_102990542 347
206 3300028381 Ga0268264_10440712 Ga0268264_104407121 347
207 3300030521 Ga0307511_10014625 Ga0307511_100146257 347
208 3300030521 Ga0307511_10015811 Ga0307511_100158114 347
209 3300031249 Ga0265339_10108614 Ga0265339_101086142 347
210 3300033180 Ga0307510_10030319 Ga0307510_100303194 347
211 3300035113 Ga0373936_0002303 Ga0373936_0002303_3248_4315 347
212 3300035113 Ga0373936_0034562 Ga0373936_0034562_58_1125 347
213 3300039437 Ga0436365_1719264 Ga0436365_1719264_1346_2413 347
214 3300039450 Ga0436363_1423519 Ga0436363_1423519_2908_3975 347
215 3300044656 Ga0466969_0005214 Ga0466969_0005214_5221_6291 347
216 3300044656 Ga0466969_0014774 Ga0466969_0014774_1186_2265 347
217 3300044684 Ga0466966_0002529 Ga0466966_0002529_3617_4687 347
218 3300044693 Ga0466961_0005805 Ga0466961_0005805_4390_5460 347
219 3300044706 Ga0466964_0001564 Ga0466964_0001564_3963_5033 347
220 3300044719 Ga0466971_0009475 Ga0466971_0009475_2429_3499 347
221 3300044765 Ga0466970_0006526 Ga0466970_0006526_674_1744 347
222 3300045049 Ga0466959_0015039 Ga0466959_0015039_2599_3669 347
223 3300048915 Ga0496112_0166486 Ga0496112_0166486_1047_2117 347
224 3300048922 Ga0496119_0002197 Ga0496119_0002197_13917_14984 347
225 3300048923 Ga0496120_0001692 Ga0496120_0001692_9971_11038 347
226 3300048924 Ga0496121_0001748 Ga0496121_0001748_33209_34279 347
227 3300048928 Ga0496125_0004380 Ga0496125_0004380_8512_9582 347
228 3300048929 Ga0496126_0009889 Ga0496126_0009889_6670_7740 347
229 3300053104 Ga0500556_0000353 Ga0500556_0000353_4347_5420 347
230 3300053153 Ga0500616_0000016 Ga0500616_0000016_230896_231963 347
231 3300053178 Ga0500637_0011753 Ga0500637_0011753_100_1167 347
232 3300053178 Ga0500637_0030570 Ga0500637_0030570_883_1959 347
233 3300054114 Ga0501084_0117156 Ga0501084_0117156_697_1761 347
234 3300061719 Ga0466962_0000083 Ga0466962_0000083_29799_30869 347
235 3300044712 Ga0453684_0012924 Ga0453684_0012924_11443_12513 348
236 3300005327 Ga0070658_10362689 Ga0070658_103626891 357
237 3300005329 Ga0070683_100052518 Ga0070683_1000525184 357
238 3300005336 Ga0070680_100012913 Ga0070680_1000129134 357
239 3300005341 Ga0070691_10003506 Ga0070691_100035064 357
240 3300005344 Ga0070661_100029897 Ga0070661_1000298974 357
241 3300005435 Ga0070714_100028739 Ga0070714_1000287393 357
242 3300005458 Ga0070681_10029415 Ga0070681_100294152 357
243 3300005530 Ga0070679_100006068 Ga0070679_10000606810 357
244 3300005563 Ga0068855_100135024 Ga0068855_1001350243 357
245 3300005577 Ga0068857_100002536 Ga0068857_1000025368 357
246 3300005614 Ga0068856_100093635 Ga0068856_1000936353 357
247 3300005616 Ga0068852_100016712 Ga0068852_1000167122 357
248 3300009551 Ga0105238_10006647 Ga0105238_1000664710 357
249 3300010375 Ga0105239_10022861 Ga0105239_100228614 357
250 3300013104 Ga0157370_10021388 Ga0157370_100213884 357
251 3300013105 Ga0157369_10009107 Ga0157369_1000910710 357
252 3300013307 Ga0157372_10007390 Ga0157372_1000739010 357
253 3300025912 Ga0207707_10000565 Ga0207707_100005659 357
254 3300025913 Ga0207695_10010034 Ga0207695_1001003410 357
255 3300025917 Ga0207660_10020365 Ga0207660_100203654 357
256 3300025920 Ga0207649_10012990 Ga0207649_100129903 357
257 3300025921 Ga0207652_10017959 Ga0207652_100179592 357
258 3300025924 Ga0207694_10003146 Ga0207694_1000314610 357
259 3300025944 Ga0207661_10002260 Ga0207661_1000226012 357
260 3300025949 Ga0207667_10008845 Ga0207667_1000884510 357
261 3300026078 Ga0207702_10012107 Ga0207702_100121077 357
262 3300026116 Ga0207674_10000166 Ga0207674_1000016638 357
263 3300026142 Ga0207698_10205785 Ga0207698_102057852 357
264 3300036401 Ga0373937_0062479 Ga0373937_0062479_2047_3120 357
265 3300048907 Ga0496104_0047453 Ga0496104_0047453_1870_2943 357
266 3300048918 Ga0496115_0068236 Ga0496115_0068236_440_1513 357

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00180

Iso_dh

Isocitrate/isopropylmalate dehydrogenase

33

377

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1a05-assembly1.cif.gz_B crystal structure of the complex of 3-isopropylmalate dehydrogenase from thiobacillus ferrooxidans with 3-isopropylmalate 0.9653 2 354
5j33-assembly3.cif.gz_F isopropylmalate dehydrogenase in complex with nad+ 0.9545 2 354
4xxv-assembly1.cif.gz_B crystal structure of 3-isopropylmalate dehydrogenase from burkholderia thailandensis in complex with nad 0.9505 1 353
3wzy-assembly1.cif.gz_A-2 s266a mutant 3-isopropylmalate dehydrogenase from shewanella oneidensis mr-1 at 580mpa - complex with ipm and mg 0.9486 2 356
3u1h-assembly1.cif.gz_B crystal structure of ipmdh from the last common ancestor of bacillus 0.9485 2 356
ID Description Score Start End Superfamily
3u1hA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9415 1 356 3.40.718.10
5hn5A00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9264 2 356 3.40.718.10
3u1hA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9209 1 356 3.40.718.10
2d1cA01 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9062 2 354 3.40.718.10
5hn5A00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.902 2 356 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A352GK28-F1-model_v4 3-isopropylmalate dehydrogenase 1.002 158 239 GO:0003862
GO:0005829
GO:0009098
GO:0046872
AF-A0A522X9R8-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) (IMDH) 0.9717 1 353 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287
AF-A0A6L5C3H2-F1-model_v4 deleted 0.969 2 355
AF-S8E5L3-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.9685 2 356 GO:0000287
GO:0003862
GO:0009098
GO:0051287
AF-A0A2N2LIF6-F1-model_v4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (3-IPM-DH) (Beta-IPM dehydrogenase) 0.9682 155 354 GO:0000287
GO:0003862
GO:0005829
GO:0009098
GO:0051287

Feature Viewer

pLDDT pTM Quality
88.73 0.9 High
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Predicted Structure (AlphaFold2)

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