F372576

General Info

Members Datasets Scaffolds Average Seq Length
264 194 248 638

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10003748|Ga0105240_100037486
Length 657
Sequence MPQRKALGYIAANPMPCKALAEEITMSTPSPHEHPNQFALLGQRRFAPFFWTQFLGAANDNLFKFAFTVLITYQVQVAWLPPEMAGLVIGALFILPFLLLSATSGQLADKFEKTRLIRFVKWLEIAIMVAAALGFATHNVPLLLACVLLMGLHSTLFGPVKFAYLPQHLNERELTGGNGMVEMGTFVAILLGNVAGGLLVSIPESGARLAGWACIALAVIGRATAQAVPHSPSTDPNLKINWNPVSETWRNLKLAHGNLVVFRSLLGISWMWFFGAVFLSQFPSFAKEVLHGDEQVASLLLVVFSVGIGIGSLLCEVLSKRHVEIGLVPLGAIGMSVFAIDLYFASRGLPASAEYGLSAFLAQRAHWRVMADLALLSLFAGLYSVPMYALIQLRSKSTHRARIIAANNIMNALFMIVSSVLAGLMLKLQFSIPQIFLAVGIANALVATYIFLLMPEYLLRFIAFVLSRCVYRFKVSGDEHIPTEGAAVLVCNHVSFIDAILLMAASPRPIRFIMDYRIFQTPVLGTIFRLAKAIPIAPQKEDAKTYDAAFAEARRVLDEGDLLGIFPEGGITRDGELQPFKGGVMKILETHPVPVIPIALKNLWGSYFSRIERGTAMAKPFRRGLWSSVALVAGEAVPAAAASPDGLRARVQGLLGA

Samples

Sample ID Description Type Environment
1 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
2 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
3 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
4 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
5 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
6 2643221660 Methylibium sp. Root1272 Isolate Unclassified
7 2643221683 Variovorax sp. Root473 Isolate Unclassified
8 2818991446 Variovorax sp. 1180 Isolate Unclassified
9 2842677519 Variovorax sp. R-72495 Isolate Unclassified
10 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
11 2899924645 Variovorax sp. 369 Isolate Unclassified
12 2928037797 Variovorax sp. 1126 Isolate Unclassified
13 2928044640 Variovorax sp. 1128 Isolate Unclassified
14 2928051484 Variovorax sp. 1133 Isolate Unclassified
15 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
16 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
20 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
21 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
22 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
25 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
28 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
29 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
30 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
58 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
59 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
60 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
61 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
66 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
83 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
84 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
85 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
88 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
90 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
94 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
95 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
98 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
131 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
134 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
135 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
136 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
137 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
138 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
139 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
140 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
141 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
142 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
143 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
144 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
145 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
146 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
147 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
148 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
149 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
152 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
153 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
154 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
155 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
156 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
157 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
158 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
159 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
160 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
161 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
162 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
163 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
164 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
165 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
166 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
167 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
168 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
169 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
170 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
171 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
172 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
173 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
174 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
175 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
176 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
177 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
178 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
179 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
180 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
181 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
182 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
183 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
184 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
185 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
186 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
189 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
190 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
191 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
192 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
193 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
194 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.94
Metatranscriptomes 0
Isolates 6.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.05
Nodule 0.76
Rhizoplane 2.65
Rhizosphere 67.8
Stem 0
Stem Tuber 0
Unclassified 11.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10006383 3300001979 Bacteria 4888
2 rootL2_10091296 3300003322 Bacteria 5110
3 Ga0055535_1000522 3300003761 Bacteria 33444
4 Ga0055542_1000003 3300003762 Bacteria 582721
5 Ga0055524_1000046 3300003775 Bacteria 150909
6 Ga0055536_1004172 3300003781 Bacteria 7476
7 Ga0055530_10001542 3300003791 Bacteria 16567
8 Ga0055540_1000093 3300003792 Bacteria 98452
9 Ga0055531_10002814 3300003794 Bacteria 11419
10 Ga0070658_10005387 3300005327 Bacteria 10385
11 Ga0070670_100119256 3300005331 Bacteria 2275
12 Ga0068869_100017782 3300005334 Bacteria 4829
13 Ga0070687_100013040 3300005343 Bacteria 3691
14 Ga0070661_100000108 3300005344 Bacteria 68597
15 Ga0070661_100071454 3300005344 Bacteria 2554
16 Ga0070668_100003871 3300005347 Bacteria 11047
17 Ga0070668_100045198 3300005347 Bacteria 3379
18 Ga0070675_100000289 3300005354 Bacteria 33460
19 Ga0070675_100009416 3300005354 Bacteria 7600
20 Ga0070671_100000158 3300005355 Bacteria 44456
21 Ga0070671_100014169 3300005355 Bacteria 6438
22 Ga0070671_100052271 3300005355 Bacteria 3397
23 Ga0070671_100052685 3300005355 Bacteria 3383
24 Ga0070673_100005202 3300005364 Bacteria 8309
25 Ga0070659_100001819 3300005366 Bacteria 15338
26 Ga0070667_100010083 3300005367 Bacteria 7820
27 Ga0070667_100027133 3300005367 Bacteria 4765
28 Ga0070663_100030710 3300005455 Bacteria 3686
29 Ga0070663_100050526 3300005455 Bacteria 2958
30 Ga0070662_100016086 3300005457 Bacteria 5019
31 Ga0068867_100000099 3300005459 Bacteria 55452
32 Ga0070706_100088988 3300005467 Bacteria 2863
33 Ga0070679_100004520 3300005530 Bacteria 12855
34 Ga0070679_100007460 3300005530 Bacteria 10220
35 Ga0070684_100076990 3300005535 Bacteria 2945
36 Ga0070672_100012204 3300005543 Bacteria 6020
37 Ga0070672_100081514 3300005543 Bacteria 2594
38 Ga0070665_100006365 3300005548 Bacteria 12040
39 Ga0068855_100023891 3300005563 Bacteria 7320
40 Ga0068855_100042421 3300005563 Bacteria 5391
41 Ga0070664_100015654 3300005564 Bacteria 6206
42 Ga0068854_100020968 3300005578 Bacteria 4428
43 Ga0068856_100164210 3300005614 Bacteria 2231
44 Ga0068852_100018385 3300005616 Bacteria 5506
45 Ga0068859_100001930 3300005617 Bacteria 21145
46 Ga0068864_100000799 3300005618 Bacteria 26376
47 Ga0068864_100069778 3300005618 Bacteria 3056
48 Ga0068864_100143423 3300005618 Bacteria 2156
49 Ga0068861_100000322 3300005719 Bacteria 26974
50 Ga0068851_10001753 3300005834 Bacteria 9486
51 Ga0068863_100002575 3300005841 Bacteria 17979
52 Ga0068863_100011599 3300005841 Bacteria 8528
53 Ga0068863_100028141 3300005841 Bacteria 5366
54 Ga0068858_100000259 3300005842 Bacteria 56570
55 Ga0068858_100007047 3300005842 Bacteria 10916
56 Ga0068860_100047930 3300005843 Bacteria 4072
57 Ga0075365_10006040 3300006038 Bacteria 6613
58 Ga0075363_100019848 3300006048 Bacteria 3364
59 Ga0075362_10022559 3300006177 Bacteria 2654
60 Ga0075367_10001427 3300006178 Bacteria 10248
61 Ga0097621_100050164 3300006237 Bacteria 3393
62 Ga0075370_10000086 3300006353 Bacteria 28513
63 Ga0075370_10000320 3300006353 Bacteria 17286
64 Ga0075370_10011379 3300006353 Bacteria 4672
65 Ga0075370_10025666 3300006353 Bacteria 3261
66 Ga0068871_100013952 3300006358 Bacteria 5975
67 Ga0097620_100001930 3300006931 Bacteria 21145
68 Ga0097620_100172449 3300006931 Bacteria 2245
69 Ga0079104_1000138 3300006946 Bacteria 103200
70 Ga0105244_10002315 3300009036 Bacteria 14476
71 Ga0105240_10003748 3300009093 Bacteria 23479
72 Ga0105240_10015636 3300009093 Bacteria 10305
73 Ga0114129_10005596 3300009147 Bacteria 17780
74 Ga0105243_10001395 3300009148 Bacteria 21357
75 Ga0105243_10004478 3300009148 Bacteria 11045
76 Ga0105243_10017587 3300009148 Bacteria 5407
77 Ga0105248_10001469 3300009177 Bacteria 26234
78 Ga0105248_10006212 3300009177 Bacteria 13094
79 Ga0105248_10069333 3300009177 Bacteria 3959
80 Ga0105237_10001399 3300009545 Bacteria 31864
81 Ga0105237_10005555 3300009545 Bacteria 14220
82 Ga0105238_10002628 3300009551 Bacteria 17911
83 Ga0105238_10003505 3300009551 Bacteria 15624
84 Ga0105239_10002059 3300010375 Bacteria 26053
85 Ga0105239_10046408 3300010375 Bacteria 4761
86 Ga0157373_10049515 3300013100 Bacteria 2994
87 Ga0157371_10071031 3300013102 Bacteria 2465
88 Ga0163162_10010411 3300013306 Bacteria 9039
89 Ga0157375_10009784 3300013308 Bacteria 8427
90 Ga0157375_10011469 3300013308 Bacteria 7827
91 Ga0182008_10008869 3300014497 Bacteria 5457
92 Ga0157377_10000010 3300014745 Bacteria 380929
93 Ga0157379_10003520 3300014968 Bacteria 13259
94 Ga0157379_10040324 3300014968 Bacteria 4167
95 Ga0157376_10010742 3300014969 Bacteria 6716
96 Ga0182006_1019836 3300015261 Bacteria 2825
97 Ga0182007_10000317 3300015262 Bacteria 30601
98 Ga0183362_10007 3300015683 Bacteria 240101
99 Ga0209672_100984 3300025228 Bacteria 12502
100 Ga0209258_100015 3300025242 Bacteria 706310
101 Ga0207425_1001691 3300025245 Bacteria 8773
102 Ga0209148_1000028 3300025254 Bacteria 582773
103 Ga0209129_1000049 3300025258 Bacteria 268086
104 Ga0209130_1000966 3300025284 Bacteria 22644
105 Ga0209130_1001110 3300025284 Bacteria 19819
106 Ga0209675_1001901 3300025291 Bacteria 11262
107 Ga0209676_1000209 3300025292 Bacteria 130388
108 Ga0209025_1001092 3300025294 Bacteria 39204
109 Ga0209758_1000496 3300025297 Bacteria 64085
110 Ga0209050_1000635 3300025298 Bacteria 54572
111 Ga0209050_1006956 3300025298 Bacteria 6520
112 Ga0209050_1010335 3300025298 Bacteria 4610
113 Ga0209256_1000019 3300025299 Bacteria 558627
114 Ga0209256_1000264 3300025299 Bacteria 92750
115 Ga0207426_1000108 3300025302 Bacteria 242257
116 Ga0209051_1000004 3300025303 Bacteria 1155596
117 Ga0209051_1000156 3300025303 Bacteria 128246
118 Ga0209051_1004044 3300025303 Bacteria 9257
119 Ga0209257_1000016 3300025304 Bacteria 908015
120 Ga0209257_1000038 3300025304 Bacteria 609032
121 Ga0209257_1000044 3300025304 Bacteria 486709
122 Ga0209257_1023041 3300025304 Bacteria 2202
123 Ga0207656_10003020 3300025321 Bacteria 5757
124 Ga0207655_1001367 3300025728 Bacteria 22840
125 Ga0207682_10003513 3300025893 Bacteria 6790
126 Ga0207680_10021515 3300025903 Bacteria 3491
127 Ga0207695_10019936 3300025913 Bacteria 7701
128 Ga0207695_10041927 3300025913 Bacteria 4894
129 Ga0207671_10019987 3300025914 Bacteria 5107
130 Ga0207662_10023576 3300025918 Bacteria 3537
131 Ga0207649_10000619 3300025920 Bacteria 23893
132 Ga0207652_10041615 3300025921 Bacteria 3907
133 Ga0207681_10000397 3300025923 Bacteria 30325
134 Ga0207694_10005467 3300025924 Bacteria 9763
135 Ga0207659_10027193 3300025926 Bacteria 3869
136 Ga0207644_10000042 3300025931 Bacteria 112685
137 Ga0207644_10026311 3300025931 Bacteria 4007
138 Ga0207706_10001138 3300025933 Bacteria 27072
139 Ga0207706_10017839 3300025933 Bacteria 6392
140 Ga0207706_10119472 3300025933 Bacteria 2317
141 Ga0207709_10000433 3300025935 Bacteria 39614
142 Ga0207709_10001092 3300025935 Bacteria 19873
143 Ga0207709_10003984 3300025935 Bacteria 8612
144 Ga0207711_10010490 3300025941 Bacteria 7695
145 Ga0207711_10011606 3300025941 Bacteria 7320
146 Ga0207711_10013415 3300025941 Bacteria 6807
147 Ga0207689_10000784 3300025942 Bacteria 30501
148 Ga0207679_10000539 3300025945 Bacteria 25641
149 Ga0207651_10000437 3300025960 Bacteria 17592
150 Ga0207712_10001633 3300025961 Bacteria 15114
151 Ga0207658_10002774 3300025986 Bacteria 12619
152 Ga0207658_10029068 3300025986 Bacteria 3898
153 Ga0207677_10000498 3300026023 Bacteria 25465
154 Ga0207703_10000970 3300026035 Bacteria 27674
155 Ga0207703_10000989 3300026035 Bacteria 27361
156 Ga0207678_10069021 3300026067 Bacteria 3031
157 Ga0207702_10129605 3300026078 Bacteria 2268
158 Ga0207641_10002258 3300026088 Bacteria 17958
159 Ga0207641_10065710 3300026088 Bacteria 3103
160 Ga0207648_10000002 3300026089 Bacteria 307909
161 Ga0207676_10000660 3300026095 Bacteria 27633
162 Ga0207676_10056113 3300026095 Bacteria 3095
163 Ga0207676_10123901 3300026095 Bacteria 2184
164 Ga0207674_10006940 3300026116 Bacteria 13263
165 Ga0207698_10015090 3300026142 Bacteria 5163
166 Ga0209281_1000023 3300027111 Bacteria 519955
167 Ga0209974_10000102 3300027876 Bacteria 24127
168 Ga0268264_10001030 3300028381 Bacteria 28012
169 Ga0268264_10056685 3300028381 Bacteria 3275
170 Ga0307515_10000063 3300028794 Bacteria 245504
171 Ga0307515_10000374 3300028794 Bacteria 109304
172 Ga0307515_10000571 3300028794 Bacteria 86938
173 Ga0307515_10000585 3300028794 Bacteria 85580
174 Ga0307515_10016138 3300028794 Bacteria 13697
175 Ga0307512_10016450 3300030522 Bacteria 6829
176 Ga0307512_10032426 3300030522 Bacteria 4511
177 Ga0265332_10000217 3300031238 Bacteria 46221
178 Ga0307513_10000028 3300031456 Bacteria 193264
179 Ga0307509_10001996 3300031507 Bacteria 33693
180 Ga0307509_10006059 3300031507 Bacteria 16481
181 Ga0307509_10016120 3300031507 Bacteria 8663
182 Ga0307508_10000096 3300031616 Bacteria 103730
183 Ga0307508_10000222 3300031616 Bacteria 69029
184 Ga0307514_10001114 3300031649 Bacteria 37486
185 Ga0307516_10004121 3300031730 Bacteria 18125
186 Ga0307516_10014853 3300031730 Bacteria 8220
187 Ga0307516_10019083 3300031730 Bacteria 7110
188 Ga0307416_100010999 3300032002 Bacteria 6009
189 Ga0307510_10001088 3300033180 Bacteria 28938
190 Ga0307510_10001144 3300033180 Bacteria 28515
191 Ga0373940_0008277 3300035088 Bacteria 2380
192 Ga0373951_0004995 3300035091 Bacteria 3107
193 Ga0373939_0000103 3300035114 Bacteria 26300
194 Ga0373960_0000174 3300035121 Bacteria 11363
195 Ga0373924_0001244 3300035410 Bacteria 8162
196 Ga0373931_0000188 3300035691 Bacteria 26757
197 Ga0395898_0010261 3300037466 Bacteria 9804
198 Ga0395905_0003555 3300037471 Bacteria 16602
199 Ga0395905_0088028 3300037471 Bacteria 2911
200 Ga0439449_0000383 3300042007 Bacteria 16354
201 Ga0450918_000055 3300042531 Bacteria 22776
202 Ga0451577_0000126 3300042876 Bacteria 168037
203 Ga0466969_0000023 3300044656 Bacteria 97322
204 Ga0466969_0003265 3300044656 Bacteria 8619
205 Ga0453683_0002492 3300044673 Bacteria 14222
206 Ga0466961_0028374 3300044693 Bacteria 3598
207 Ga0466963_0006048 3300044694 Bacteria 7130
208 Ga0453684_0000365 3300044712 Bacteria 186233
209 Ga0466971_0008748 3300044719 Bacteria 4416
210 Ga0466959_0000270 3300045049 Bacteria 31887
211 Ga0466959_0012466 3300045049 Bacteria 6143
212 Ga0451576_0004526 3300045051 Bacteria 17994
213 Ga0495592_0001430 3300046454 Bacteria 16562
214 Ga0495580_0038127 3300046472 Bacteria 3444
215 Ga0495632_0007531 3300046519 Bacteria 6823
216 Ga0495666_0009633 3300046526 Bacteria 4829
217 Ga0495586_0016304 3300046535 Bacteria 3951
218 Ga0495622_0009035 3300046557 Bacteria 4615
219 Ga0495656_0000247 3300046615 Bacteria 19047
220 Ga0495625_0013410 3300046660 Bacteria 6587
221 Ga0495613_0040022 3300046689 Bacteria 3474
222 Ga0495624_0014635 3300046690 Bacteria 5316
223 Ga0495649_0005566 3300046694 Bacteria 7976
224 Ga0495660_0016736 3300046810 Bacteria 4225
225 Ga0495581_0012768 3300047315 Bacteria 4866
226 Ga0495581_0019214 3300047315 Bacteria 3965
227 Ga0495604_0022970 3300047317 Bacteria 4977
228 Ga0495636_0019873 3300047318 Bacteria 2703
229 Ga0495687_000161 3300047443 Bacteria 100635
230 Ga0495593_0015256 3300047673 Bacteria 4357
231 Ga0496100_0014192 3300048903 Bacteria 4619
232 Ga0496101_0050199 3300048904 Bacteria 3002
233 Ga0496102_0030308 3300048905 Bacteria 4841
234 Ga0496109_0058171 3300048912 Bacteria 3531
235 Ga0496112_0014001 3300048915 Bacteria 7423
236 Ga0496113_0019719 3300048916 Bacteria 4725
237 Ga0496114_0060412 3300048917 Bacteria 3168
238 Ga0501043_0000784 3300049579 Bacteria 28269
239 Ga0501047_0000087 3300049581 Bacteria 117516
240 Ga0501198_000009 3300049649 Bacteria 122302
241 Ga0501222_000001 3300049662 Bacteria 307689
242 Ga0501225_0004331 3300049705 Bacteria 4242
243 nmdc:mga0k408_4023_c1 3300050493 Bacteria 7804
244 nmdc:mga0k408_508_c1 3300050493 Bacteria 21378
245 nmdc:mga07m45_2330_c1 3300050496 Bacteria 8895
246 nmdc:mga07m45_5472_c1 3300050496 Bacteria 6324
247 Ga0500658_0007384 3300053134 Bacteria 4059
248 Ga0500559_0000020 3300053136 Bacteria 134858

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025921 Ga0207652_10041615 Ga0207652_100416153 573
2 3300031730 Ga0307516_10014853 Ga0307516_100148535 581
3 3300006353 Ga0075370_10000320 Ga0075370_100003207 585
4 3300050493 nmdc:mga0k408_508_c1 nmdc:mga0k408_508_c1_4107_6002 585
5 3300031507 Ga0307509_10016120 Ga0307509_100161201 592
6 3300003761 Ga0055535_1000522 Ga0055535_10005227 596
7 3300003762 Ga0055542_1000003 Ga0055542_1000003100 596
8 3300005834 Ga0068851_10001753 Ga0068851_100017538 596
9 3300025228 Ga0209672_100984 Ga0209672_10098413 596
10 3300025242 Ga0209258_100015 Ga0209258_100015219 596
11 3300025254 Ga0209148_1000028 Ga0209148_1000028449 596
12 3300025321 Ga0207656_10003020 Ga0207656_100030204 596
13 3300006177 Ga0075362_10022559 Ga0075362_100225591 597
14 3300009148 Ga0105243_10017587 Ga0105243_100175872 597
15 3300005548 Ga0070665_100006365 Ga0070665_1000063657 599
16 3300013308 Ga0157375_10009784 Ga0157375_100097843 601
17 3300028794 Ga0307515_10000063 Ga0307515_1000006359 609
18 3300003781 Ga0055536_1004172 Ga0055536_10041721 610
19 3300025292 Ga0209676_1000209 Ga0209676_100020968 610
20 3300025303 Ga0209051_1000156 Ga0209051_100015645 610
21 3300009148 Ga0105243_10001395 Ga0105243_1000139512 611
22 3300025935 Ga0207709_10000433 Ga0207709_1000043327 611
23 3300045051 Ga0451576_0004526 Ga0451576_0004526_15370_17247 611
24 3300003322 rootL2_10091296 rootL2_100912964 612
25 3300037471 Ga0395905_0088028 Ga0395905_0088028_700_2625 612
26 3300005355 Ga0070671_100052685 Ga0070671_1000526852 613
27 3300005618 Ga0068864_100069778 Ga0068864_1000697782 613
28 3300009177 Ga0105248_10069333 Ga0105248_100693333 613
29 3300025941 Ga0207711_10013415 Ga0207711_100134156 613
30 3300026095 Ga0207676_10056113 Ga0207676_100561132 613
31 3300048912 Ga0496109_0058171 Ga0496109_0058171_1259_3154 613
32 3300048915 Ga0496112_0014001 Ga0496112_0014001_845_2740 613
33 3300048916 Ga0496113_0019719 Ga0496113_0019719_2096_3991 613
34 3300031616 Ga0307508_10000222 Ga0307508_1000022246 614
35 3300031507 Ga0307509_10001996 Ga0307509_1000199626 615
36 iso_pu_bacteria 2643221654 2644305335 619
37 3300005459 Ga0068867_100000099 Ga0068867_10000009941 620
38 3300009148 Ga0105243_10004478 Ga0105243_100044789 620
39 3300014745 Ga0157377_10000010 Ga0157377_10000010282 620
40 3300026089 Ga0207648_10000002 Ga0207648_10000002219 620
41 3300031238 Ga0265332_10000217 Ga0265332_100002176 620
42 iso_pu_bacteria 2585428062 2587756722 620
43 iso_pu_bacteria 2643221639 2644220580 620
44 iso_pu_bacteria 2643221660 2644339424 620
45 3300035410 Ga0373924_0001244 Ga0373924_0001244_644_2557 621
46 iso_pu_bacteria 2643221644 2644245018 621
47 3300005327 Ga0070658_10005387 Ga0070658_100053872 622
48 3300005334 Ga0068869_100017782 Ga0068869_1000177823 622
49 3300005354 Ga0070675_100009416 Ga0070675_1000094164 622
50 3300005355 Ga0070671_100052271 Ga0070671_1000522713 622
51 3300005367 Ga0070667_100027133 Ga0070667_1000271335 622
52 3300005455 Ga0070663_100050526 Ga0070663_1000505262 622
53 3300005457 Ga0070662_100016086 Ga0070662_1000160863 622
54 3300005535 Ga0070684_100076990 Ga0070684_1000769901 622
55 3300005563 Ga0068855_100042421 Ga0068855_1000424212 622
56 3300005614 Ga0068856_100164210 Ga0068856_1001642102 622
57 3300005616 Ga0068852_100018385 Ga0068852_1000183854 622
58 3300005841 Ga0068863_100028141 Ga0068863_1000281414 622
59 3300005842 Ga0068858_100007047 Ga0068858_1000070474 622
60 3300005843 Ga0068860_100047930 Ga0068860_1000479303 622
61 3300006038 Ga0075365_10006040 Ga0075365_100060402 622
62 3300009551 Ga0105238_10003505 Ga0105238_100035055 622
63 3300013100 Ga0157373_10049515 Ga0157373_100495152 622
64 3300013102 Ga0157371_10071031 Ga0157371_100710312 622
65 3300014968 Ga0157379_10003520 Ga0157379_1000352010 622
66 3300025933 Ga0207706_10001138 Ga0207706_1000113825 622
67 3300025942 Ga0207689_10000784 Ga0207689_100007843 622
68 3300026067 Ga0207678_10069021 Ga0207678_100690212 622
69 3300026078 Ga0207702_10129605 Ga0207702_101296052 622
70 3300026088 Ga0207641_10065710 Ga0207641_100657102 622
71 3300026116 Ga0207674_10006940 Ga0207674_100069408 622
72 3300028381 Ga0268264_10056685 Ga0268264_100566852 622
73 3300030522 Ga0307512_10016450 Ga0307512_100164504 622
74 3300031507 Ga0307509_10006059 Ga0307509_100060595 622
75 3300032002 Ga0307416_100010999 Ga0307416_1000109996 622
76 3300033180 Ga0307510_10001088 Ga0307510_1000108818 622
77 3300033180 Ga0307510_10001144 Ga0307510_100011449 622
78 3300042876 Ga0451577_0000126 Ga0451577_0000126_158474_160384 622
79 3300044712 Ga0453684_0000365 Ga0453684_0000365_165799_167709 622
80 3300046454 Ga0495592_0001430 Ga0495592_0001430_2725_4617 622
81 3300046472 Ga0495580_0038127 Ga0495580_0038127_79_2001 622
82 3300046526 Ga0495666_0009633 Ga0495666_0009633_1227_3143 622
83 3300046535 Ga0495586_0016304 Ga0495586_0016304_501_2417 622
84 3300046557 Ga0495622_0009035 Ga0495622_0009035_1577_3493 622
85 3300046690 Ga0495624_0014635 Ga0495624_0014635_2164_4080 622
86 3300047315 Ga0495581_0012768 Ga0495581_0012768_1793_3709 622
87 3300047315 Ga0495581_0019214 Ga0495581_0019214_74_1990 622
88 3300047317 Ga0495604_0022970 Ga0495604_0022970_1116_3032 622
89 3300047673 Ga0495593_0015256 Ga0495593_0015256_2001_3917 622
90 3300048903 Ga0496100_0014192 Ga0496100_0014192_1530_3452 622
91 3300048904 Ga0496101_0050199 Ga0496101_0050199_410_2332 622
92 3300049649 Ga0501198_000009 Ga0501198_000009_40967_42853 622
93 3300049662 Ga0501222_000001 Ga0501222_000001_142106_143992 622
94 3300053136 Ga0500559_0000020 Ga0500559_0000020_74564_76456 622
95 3300005343 Ga0070687_100013040 Ga0070687_1000130402 623
96 3300005344 Ga0070661_100000108 Ga0070661_10000010870 623
97 3300005344 Ga0070661_100071454 Ga0070661_1000714542 623
98 3300005347 Ga0070668_100003871 Ga0070668_1000038719 623
99 3300005355 Ga0070671_100000158 Ga0070671_1000001584 623
100 3300005366 Ga0070659_100001819 Ga0070659_10000181910 623
101 3300005455 Ga0070663_100030710 Ga0070663_1000307102 623
102 3300005530 Ga0070679_100007460 Ga0070679_1000074608 623
103 3300005543 Ga0070672_100012204 Ga0070672_1000122043 623
104 3300005578 Ga0068854_100020968 Ga0068854_1000209683 623
105 3300005618 Ga0068864_100143423 Ga0068864_1001434232 623
106 3300005719 Ga0068861_100000322 Ga0068861_10000032214 623
107 3300005841 Ga0068863_100011599 Ga0068863_1000115996 623
108 3300006048 Ga0075363_100019848 Ga0075363_1000198483 623
109 3300006178 Ga0075367_10001427 Ga0075367_100014274 623
110 3300006353 Ga0075370_10000086 Ga0075370_1000008628 623
111 3300006353 Ga0075370_10011379 Ga0075370_100113794 623
112 3300006353 Ga0075370_10025666 Ga0075370_100256662 623
113 3300009093 Ga0105240_10015636 Ga0105240_100156364 623
114 3300009177 Ga0105248_10001469 Ga0105248_1000146910 623
115 3300009177 Ga0105248_10006212 Ga0105248_100062124 623
116 3300009545 Ga0105237_10005555 Ga0105237_100055559 623
117 3300010375 Ga0105239_10046408 Ga0105239_100464083 623
118 3300013306 Ga0163162_10010411 Ga0163162_100104117 623
119 3300013308 Ga0157375_10011469 Ga0157375_100114696 623
120 3300014969 Ga0157376_10010742 Ga0157376_100107421 623
121 3300025304 Ga0209257_1023041 Ga0209257_10230411 623
122 3300025893 Ga0207682_10003513 Ga0207682_100035136 623
123 3300025903 Ga0207680_10021515 Ga0207680_100215152 623
124 3300025913 Ga0207695_10041927 Ga0207695_100419274 623
125 3300025914 Ga0207671_10019987 Ga0207671_100199874 623
126 3300025918 Ga0207662_10023576 Ga0207662_100235762 623
127 3300025920 Ga0207649_10000619 Ga0207649_100006193 623
128 3300025923 Ga0207681_10000397 Ga0207681_1000039720 623
129 3300025926 Ga0207659_10027193 Ga0207659_100271934 623
130 3300025931 Ga0207644_10000042 Ga0207644_1000004210 623
131 3300025933 Ga0207706_10119472 Ga0207706_101194722 623
132 3300025935 Ga0207709_10003984 Ga0207709_100039844 623
133 3300025941 Ga0207711_10010490 Ga0207711_100104902 623
134 3300025945 Ga0207679_10000539 Ga0207679_100005392 623
135 3300025961 Ga0207712_10001633 Ga0207712_1000163315 623
136 3300025986 Ga0207658_10002774 Ga0207658_1000277410 623
137 3300026035 Ga0207703_10000989 Ga0207703_1000098918 623
138 3300026095 Ga0207676_10123901 Ga0207676_101239012 623
139 3300026142 Ga0207698_10015090 Ga0207698_100150902 623
140 3300027876 Ga0209974_10000102 Ga0209974_1000010223 623
141 3300028381 Ga0268264_10001030 Ga0268264_1000103019 623
142 3300044656 Ga0466969_0003265 Ga0466969_0003265_3219_5183 623
143 3300044693 Ga0466961_0028374 Ga0466961_0028374_27_1991 623
144 3300044694 Ga0466963_0006048 Ga0466963_0006048_4875_6839 623
145 3300044719 Ga0466971_0008748 Ga0466971_0008748_2426_4390 623
146 3300045049 Ga0466959_0000270 Ga0466959_0000270_22969_24933 623
147 3300046519 Ga0495632_0007531 Ga0495632_0007531_3790_5685 623
148 3300046660 Ga0495625_0013410 Ga0495625_0013410_2426_4321 623
149 3300046689 Ga0495613_0040022 Ga0495613_0040022_455_2386 623
150 3300046694 Ga0495649_0005566 Ga0495649_0005566_4467_6362 623
151 3300046810 Ga0495660_0016736 Ga0495660_0016736_188_2083 623
152 3300047318 Ga0495636_0019873 Ga0495636_0019873_416_2323 623
153 3300047443 Ga0495687_000161 Ga0495687_000161_51930_53834 623
154 3300049579 Ga0501043_0000784 Ga0501043_0000784_10762_12687 623
155 3300049581 Ga0501047_0000087 Ga0501047_0000087_15583_17508 623
156 3300050493 nmdc:mga0k408_4023_c1 nmdc:mga0k408_4023_c1_2807_4759 623
157 3300050496 nmdc:mga07m45_2330_c1 nmdc:mga07m45_2330_c1_3716_5626 623
158 3300050496 nmdc:mga07m45_5472_c1 nmdc:mga07m45_5472_c1_1931_3883 623
159 3300053134 Ga0500658_0007384 Ga0500658_0007384_206_2101 623
160 3300005331 Ga0070670_100119256 Ga0070670_1001192561 624
161 3300005347 Ga0070668_100045198 Ga0070668_1000451983 624
162 3300005354 Ga0070675_100000289 Ga0070675_10000028912 624
163 3300005355 Ga0070671_100014169 Ga0070671_1000141695 624
164 3300005364 Ga0070673_100005202 Ga0070673_1000052026 624
165 3300005367 Ga0070667_100010083 Ga0070667_1000100831 624
166 3300005467 Ga0070706_100088988 Ga0070706_1000889881 624
167 3300005530 Ga0070679_100004520 Ga0070679_1000045203 624
168 3300005543 Ga0070672_100081514 Ga0070672_1000815142 624
169 3300005563 Ga0068855_100023891 Ga0068855_1000238912 624
170 3300005564 Ga0070664_100015654 Ga0070664_1000156546 624
171 3300005617 Ga0068859_100001930 Ga0068859_10000193016 624
172 3300005618 Ga0068864_100000799 Ga0068864_10000079922 624
173 3300005841 Ga0068863_100002575 Ga0068863_1000025756 624
174 3300005842 Ga0068858_100000259 Ga0068858_10000025931 624
175 3300006237 Ga0097621_100050164 Ga0097621_1000501642 624
176 3300006358 Ga0068871_100013952 Ga0068871_1000139525 624
177 3300006931 Ga0097620_100001930 Ga0097620_10000193016 624
178 3300006931 Ga0097620_100172449 Ga0097620_1001724492 624
179 3300009036 Ga0105244_10002315 Ga0105244_1000231514 624
180 3300009093 Ga0105240_10003748 Ga0105240_100037486 624
181 3300009545 Ga0105237_10001399 Ga0105237_1000139917 624
182 3300009551 Ga0105238_10002628 Ga0105238_1000262814 624
183 3300010375 Ga0105239_10002059 Ga0105239_100020594 624
184 3300014497 Ga0182008_10008869 Ga0182008_100088695 624
185 3300014968 Ga0157379_10040324 Ga0157379_100403243 624
186 3300015261 Ga0182006_1019836 Ga0182006_10198362 624
187 3300015262 Ga0182007_10000317 Ga0182007_1000031714 624
188 3300015683 Ga0183362_10007 Ga0183362_1000799 624
189 3300025245 Ga0207425_1001691 Ga0207425_10016918 624
190 3300025258 Ga0209129_1000049 Ga0209129_1000049224 624
191 3300025284 Ga0209130_1000966 Ga0209130_10009665 624
192 3300025284 Ga0209130_1001110 Ga0209130_10011102 624
193 3300025294 Ga0209025_1001092 Ga0209025_100109223 624
194 3300025297 Ga0209758_1000496 Ga0209758_100049626 624
195 3300025298 Ga0209050_1006956 Ga0209050_10069567 624
196 3300025299 Ga0209256_1000264 Ga0209256_100026440 624
197 3300025302 Ga0207426_1000108 Ga0207426_1000108190 624
198 3300025303 Ga0209051_1004044 Ga0209051_10040446 624
199 3300025304 Ga0209257_1000016 Ga0209257_1000016669 624
200 3300025728 Ga0207655_1001367 Ga0207655_100136715 624
201 3300025913 Ga0207695_10019936 Ga0207695_100199366 624
202 3300025924 Ga0207694_10005467 Ga0207694_100054674 624
203 3300025931 Ga0207644_10026311 Ga0207644_100263112 624
204 3300025935 Ga0207709_10001092 Ga0207709_100010929 624
205 3300025941 Ga0207711_10011606 Ga0207711_100116064 624
206 3300025960 Ga0207651_10000437 Ga0207651_1000043716 624
207 3300025986 Ga0207658_10029068 Ga0207658_100290682 624
208 3300026023 Ga0207677_10000498 Ga0207677_1000049819 624
209 3300026035 Ga0207703_10000970 Ga0207703_1000097027 624
210 3300026088 Ga0207641_10002258 Ga0207641_100022585 624
211 3300026095 Ga0207676_10000660 Ga0207676_100006608 624
212 3300028794 Ga0307515_10000374 Ga0307515_1000037473 624
213 3300028794 Ga0307515_10000585 Ga0307515_1000058574 624
214 3300028794 Ga0307515_10016138 Ga0307515_1001613810 624
215 3300030522 Ga0307512_10032426 Ga0307512_100324262 624
216 3300031456 Ga0307513_10000028 Ga0307513_10000028148 624
217 3300031616 Ga0307508_10000096 Ga0307508_1000009686 624
218 3300031730 Ga0307516_10004121 Ga0307516_1000412113 624
219 3300031730 Ga0307516_10019083 Ga0307516_100190832 624
220 3300035088 Ga0373940_0008277 Ga0373940_0008277_413_2311 624
221 3300035091 Ga0373951_0004995 Ga0373951_0004995_729_2627 624
222 3300035114 Ga0373939_0000103 Ga0373939_0000103_10962_12860 624
223 3300035121 Ga0373960_0000174 Ga0373960_0000174_2482_4380 624
224 3300035691 Ga0373931_0000188 Ga0373931_0000188_13003_14901 624
225 3300037466 Ga0395898_0010261 Ga0395898_0010261_2941_4872 624
226 3300042531 Ga0450918_000055 Ga0450918_000055_5823_7727 624
227 3300044656 Ga0466969_0000023 Ga0466969_0000023_8480_10408 624
228 3300044673 Ga0453683_0002492 Ga0453683_0002492_6609_8543 624
229 3300045049 Ga0466959_0012466 Ga0466959_0012466_1432_3360 624
230 3300046615 Ga0495656_0000247 Ga0495656_0000247_1159_3111 624
231 iso_pu_bacteria 2513020051 2513227537 624
232 iso_pu_bacteria 2643221683 2644466513 624
233 iso_pu_bacteria 2818991446 2819597974 624
234 iso_pu_bacteria 2842677519 2842678312 624
235 iso_pu_bacteria 2899924645 2899929393 624
236 iso_pu_bacteria 2928037797 2928040163 624
237 iso_pu_bacteria 2928044640 2928047088 624
238 iso_pu_bacteria 2928051484 2928057708 624
239 iso_pu_bacteria 2928064002 2928067909 624
240 3300003775 Ga0055524_1000046 Ga0055524_1000046121 625
241 3300003791 Ga0055530_10001542 Ga0055530_1000154212 625
242 3300003792 Ga0055540_1000093 Ga0055540_100009319 625
243 3300003794 Ga0055531_10002814 Ga0055531_100028149 625
244 3300006946 Ga0079104_1000138 Ga0079104_100013820 625
245 3300009147 Ga0114129_10005596 Ga0114129_100055968 625
246 3300025291 Ga0209675_1001901 Ga0209675_10019015 625
247 3300025298 Ga0209050_1000635 Ga0209050_100063518 625
248 3300025298 Ga0209050_1010335 Ga0209050_10103354 625
249 3300025299 Ga0209256_1000019 Ga0209256_100001928 625
250 3300025303 Ga0209051_1000004 Ga0209051_1000004374 625
251 3300025304 Ga0209257_1000038 Ga0209257_1000038508 625
252 3300025304 Ga0209257_1000044 Ga0209257_100004451 625
253 3300025933 Ga0207706_10017839 Ga0207706_100178395 625
254 3300027111 Ga0209281_1000023 Ga0209281_1000023405 625
255 3300028794 Ga0307515_10000571 Ga0307515_1000057137 625
256 3300031649 Ga0307514_10001114 Ga0307514_100011148 625
257 3300037471 Ga0395905_0003555 Ga0395905_0003555_7590_9485 625
258 3300042007 Ga0439449_0000383 Ga0439449_0000383_8340_10301 625
259 3300048905 Ga0496102_0030308 Ga0496102_0030308_413_2350 625
260 3300049705 Ga0501225_0004331 Ga0501225_0004331_445_2406 625
261 iso_pu_bacteria 2885192300 2885197748 625
262 iso_pu_bacteria 2954767861 2954769626 625
263 3300001979 JGI24740J21852_10006383 JGI24740J21852_100063833 626
264 3300048917 Ga0496114_0060412 Ga0496114_0060412_188_2164 626

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01553

Acyltransferase

Acyltransferase

472

601

0.96

PF07690

MFS_1

Major Facilitator Superfamily

283

461

0.82

PF05977

MFS_3

Transmembrane secretion effector

37

368

0.81

PF07690

MFS_1

Major Facilitator Superfamily

49

361

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
8t69-assembly1.cif.gz_A human vmat2 in complex with tetrabenazine 0.804 20 426
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.7976 23 421
8t69-assembly1.cif.gz_A human vmat2 in complex with tetrabenazine 0.7873 20 426
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.7858 20 430
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.7829 25 424
ID Description Score Start End Superfamily
af_Q9VCJ5_201_360_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8694 56 202 1.20.1250.20
af_Q8IL62_347_573_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8486 20 201 1.20.1250.20
af_Q2G1R0_3_202_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8477 13 216 1.20.1250.20
af_A0A1D6L8U4_23_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8477 20 201 1.20.1250.20
af_Q2FZP8_8_190_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8474 18 206 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A5R9JF13-F1-model_v4 MFS transporter 0.9231 17 422 GO:0005886
GO:0022857
AF-A0A257WU83-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9156 66 421 GO:0005886
GO:0022857
AF-A0A3D0XD17-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9097 1 310 GO:0005886
GO:0022857
AF-A0A257WU83-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8816 66 421 GO:0005886
GO:0022857
AF-A0A7C3I3B3-F1-model_v4 MFS transporter 0.878 17 421 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
85.83 0.81 High
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Predicted Structure (AlphaFold2)

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