F372290

General Info

Members Datasets Scaffolds Average Seq Length
264 143 528 788

Family's Representative Sequence

Representative Sequence 3300000549|LJQas_1000094|LJQas_10000944
Length 839
Sequence LTFDFRPLNFEKKKSKLKGLKSKIKLNMSKRFPDLASPFSKARKTIGGYFARPFENFSKRQIFWTGFALLCIVTTFLINNPFWRSSVEQYKEGDIARENITSPADITVTDTEETDKNKQAVRESVFPIFTFESNRAEQAVQSFRSAWEKLERKSDGANINSNIKTDAQWTGAGGAELGKVFTARRFSSNEIDAVNRLLRENAQGFIYGDQDRQYFENVNEISYHDRQKPNSQGKVTNPESSMTALSVARQNVYDGLKQIKSLSEKEVEAFNAALAPLIQSSIIYDSVQTESEREAMTKGVAPVTISLKRGEVIVRDGDIITQDALRKIAAKRSYSESTRQINRFFGLLVLISALFWVAWKFIQHNQVGSRHALSAERSFALFGFIVIVQTALMAIFFRLAEFTAMQNEKAPLNDSSLWAFAIPFAFGSLMMTLLADRRMALFTGLFLALIAGMLAPKALEFTLLAAITSAVAVYGIGRYRSRQSVTIAGVLVGLASAAAAIALIGYTQQPFILNTVMLAVACGLGSGLVTAAVTAVFLPMCENVFGILTDVKLLELSNADLPVLGQLALRAPGTNQHSHAVGQLAEEACRVVGANGLLARIGALYHDIGKSAAPEHFVENQLGRNPHDKLKPSQSAKIIISHVTYGTKLAKDMRLPQRIIDFIPQHHGTRTLHFFLRKAQAEARDESEISENDFRYPGPKPQFKEAAIMMIADSCEAAARSLSEPTPENIRFIVTKIIDAILQDDQLDECDLTLRELTLIREAMIKSLVAIYHSRVDYPGYVPPSSMQKILIPDDLDSEERGMLYKNPAEIPISPGGEVEDEAVDRSHQPNKAEAKMVK

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
133 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
134 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
135 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
136 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0
Rhizoplane 0.38
Rhizosphere 97.35
Stem 0
Stem Tuber 0
Unclassified 7.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000094 3300000549 Bacteria 15455
2 JGI24751J29686_10000124 3300002459 Bacteria 38798
3 Ga0065714_10066197 3300005288 Bacteria 7372
4 Ga0065712_10067792 3300005290 Bacteria 34297
5 Ga0065712_10072798 3300005290 Unclassified 4613
6 Ga0065715_10090188 3300005293 Bacteria 7487
7 Ga0065715_10091704 3300005293 Bacteria 5600
8 Ga0065707_10006234 3300005295 Unclassified 2974
9 Ga0070658_10004176 3300005327 Bacteria 11813
10 Ga0070690_100001079 3300005330 Bacteria 13993
11 Ga0070690_100001112 3300005330 Bacteria 13830
12 Ga0070690_100015713 3300005330 Bacteria 4521
13 Ga0070670_100001822 3300005331 Bacteria 17358
14 Ga0070670_100012072 3300005331 Bacteria 7391
15 Ga0070670_100013525 3300005331 Bacteria 6993
16 Ga0070670_100037383 3300005331 Bacteria 4177
17 Ga0070670_100068197 3300005331 Bacteria 3053
18 Ga0068869_100041548 3300005334 Bacteria 3294
19 Ga0070682_100000247 3300005337 Bacteria 39158
20 Ga0070682_100006339 3300005337 Bacteria 6641
21 Ga0068868_100020326 3300005338 Bacteria 4986
22 Ga0070689_100005159 3300005340 Bacteria 8888
23 Ga0070687_100000973 3300005343 Bacteria 9748
24 Ga0070692_10017835 3300005345 Bacteria 3402
25 Ga0070669_100001203 3300005353 Bacteria 18857
26 Ga0070671_100002297 3300005355 Bacteria 14761
27 Ga0070671_100004605 3300005355 Bacteria 10936
28 Ga0070659_100009653 3300005366 Bacteria 7094
29 Ga0070667_100018627 3300005367 Bacteria 5759
30 Ga0070667_100034687 3300005367 Unclassified 4223
31 Ga0070667_100045787 3300005367 Bacteria 3679
32 Ga0070705_100001506 3300005440 Bacteria 12262
33 Ga0070700_100000173 3300005441 Bacteria 36530
34 Ga0070700_100010026 3300005441 Bacteria 5216
35 Ga0070700_100018238 3300005441 Bacteria 4031
36 Ga0070708_100000149 3300005445 Bacteria 48348
37 Ga0070708_100023170 3300005445 Bacteria 5276
38 Ga0070681_10000208 3300005458 Bacteria 45856
39 Ga0070681_10001592 3300005458 Bacteria 20185
40 Ga0068867_100009390 3300005459 Bacteria 6901
41 Ga0068867_100042679 3300005459 Bacteria 3319
42 Ga0070706_100000300 3300005467 Bacteria 60347
43 Ga0070706_100006424 3300005467 Bacteria 11104
44 Ga0070706_100026640 3300005467 Bacteria 5318
45 Ga0070706_100062617 3300005467 Bacteria 3437
46 Ga0070707_100015421 3300005468 Bacteria 7170
47 Ga0070698_100001512 3300005471 Bacteria 25768
48 Ga0070698_100011452 3300005471 Bacteria 9411
49 Ga0070698_100020717 3300005471 Bacteria 6892
50 Ga0070699_100000287 3300005518 Bacteria 48358
51 Ga0070699_100012445 3300005518 Bacteria 7341
52 Ga0070699_100020986 3300005518 Bacteria 5631
53 Ga0070699_100071422 3300005518 Bacteria 3019
54 Ga0070679_100000234 3300005530 Bacteria 45861
55 Ga0070679_100017759 3300005530 Bacteria 6888
56 Ga0070684_100047909 3300005535 Bacteria 3706
57 Ga0070697_100000462 3300005536 Bacteria 31136
58 Ga0070697_100078911 3300005536 Bacteria 2710
59 Ga0068853_100005421 3300005539 Bacteria 9992
60 Ga0068853_100007224 3300005539 Bacteria 8898
61 Ga0070686_100005875 3300005544 Bacteria 6802
62 Ga0070696_100006391 3300005546 Bacteria 7885
63 Ga0070696_100006556 3300005546 Bacteria 7771
64 Ga0070693_100001493 3300005547 Bacteria 10543
65 Ga0070704_100002582 3300005549 Bacteria 10213
66 Ga0070664_100002068 3300005564 Bacteria 16025
67 Ga0070664_100025235 3300005564 Bacteria 4924
68 Ga0068857_100000167 3300005577 Bacteria 41275
69 Ga0070702_100000327 3300005615 Bacteria 16557
70 Ga0068852_100061356 3300005616 Bacteria 3268
71 Ga0068859_100003869 3300005617 Bacteria 15295
72 Ga0068859_100012775 3300005617 Bacteria 8438
73 Ga0068859_100019926 3300005617 Bacteria 6734
74 Ga0068859_100020802 3300005617 Bacteria 6586
75 Ga0068859_100033404 3300005617 Bacteria 5165
76 Ga0068859_100069094 3300005617 Bacteria 3567
77 Ga0068864_100003788 3300005618 Bacteria 12471
78 Ga0068864_100004233 3300005618 Bacteria 11810
79 Ga0068864_100011576 3300005618 Bacteria 7284
80 Ga0068864_100028661 3300005618 Bacteria 4709
81 Ga0068864_100043882 3300005618 Bacteria 3829
82 Ga0068864_100077750 3300005618 Bacteria 2903
83 Ga0068866_10004637 3300005718 Bacteria 5638
84 Ga0068861_100004957 3300005719 Bacteria 8966
85 Ga0068851_10005780 3300005834 Bacteria 5633
86 Ga0068870_10013800 3300005840 Bacteria 3804
87 Ga0068863_100028818 3300005841 Bacteria 5302
88 Ga0068858_100022588 3300005842 Bacteria 5868
89 Ga0068858_100052907 3300005842 Bacteria 3757
90 Ga0068858_100083564 3300005842 Bacteria 2969
91 Ga0068860_100030334 3300005843 Bacteria 5201
92 Ga0068860_100037655 3300005843 Bacteria 4630
93 Ga0068860_100038011 3300005843 Bacteria 4606
94 Ga0068860_100047498 3300005843 Unclassified 4091
95 Ga0081539_10000990 3300005985 Bacteria 52811
96 Ga0081539_10002488 3300005985 Bacteria 25905
97 Ga0097621_100004385 3300006237 Bacteria 9820
98 Ga0097621_100013450 3300006237 Bacteria 6100
99 Ga0097621_100033153 3300006237 Bacteria 4111
100 Ga0068871_100003267 3300006358 Bacteria 11121
101 Ga0068871_100003839 3300006358 Bacteria 10355
102 Ga0075428_100065208 3300006844 Bacteria 3988
103 Ga0075430_100022226 3300006846 Bacteria 5394
104 Ga0075431_100017295 3300006847 Bacteria 7327
105 Ga0075431_100113174 3300006847 Bacteria 2801
106 Ga0075433_10027994 3300006852 Bacteria 4787
107 Ga0075433_10031289 3300006852 Bacteria 4548
108 Ga0075433_10064124 3300006852 Unclassified 3220
109 Ga0075429_100003353 3300006880 Bacteria 13654
110 Ga0097620_100003869 3300006931 Bacteria 15295
111 Ga0097620_100012775 3300006931 Bacteria 8438
112 Ga0097620_100019926 3300006931 Bacteria 6734
113 Ga0097620_100020801 3300006931 Bacteria 6586
114 Ga0097620_100033405 3300006931 Bacteria 5165
115 Ga0097620_100069092 3300006931 Bacteria 3567
116 Ga0075435_100004812 3300007076 Bacteria 9339
117 Ga0111539_10004928 3300009094 Bacteria 17367
118 Ga0111539_10031969 3300009094 Bacteria 6393
119 Ga0105247_10001646 3300009101 Bacteria 15800
120 Ga0105247_10012620 3300009101 Bacteria 5073
121 Ga0114129_10000991 3300009147 Bacteria 37136
122 Ga0114129_10033925 3300009147 Bacteria 7209
123 Ga0114129_10121887 3300009147 Unclassified 3588
124 Ga0105243_10005960 3300009148 Bacteria 9443
125 Ga0105241_10029420 3300009174 Bacteria 4099
126 Ga0105242_10000639 3300009176 Bacteria 27474
127 Ga0105242_10027412 3300009176 Unclassified 4523
128 Ga0105248_10005524 3300009177 Bacteria 13885
129 Ga0105248_10006658 3300009177 Bacteria 12676
130 Ga0105248_10017059 3300009177 Bacteria 7996
131 Ga0105248_10032880 3300009177 Bacteria 5795
132 Ga0105248_10052606 3300009177 Bacteria 4570
133 Ga0105237_10001358 3300009545 Bacteria 32392
134 Ga0105237_10035758 3300009545 Bacteria 5025
135 Ga0105238_10015961 3300009551 Bacteria 7600
136 Ga0105238_10021887 3300009551 Bacteria 6513
137 Ga0105249_10000270 3300009553 Bacteria 54601
138 Ga0105249_10051608 3300009553 Bacteria 3752
139 Ga0157373_10004420 3300013100 Bacteria 10590
140 Ga0157373_10054330 3300013100 Unclassified 2846
141 Ga0157370_10025419 3300013104 Bacteria 5861
142 Ga0157374_10022056 3300013296 Bacteria 5676
143 Ga0157378_10006572 3300013297 Bacteria 10154
144 Ga0157378_10020777 3300013297 Bacteria 5773
145 Ga0157378_10028938 3300013297 Bacteria 4891
146 Ga0163162_10000006 3300013306 Bacteria 410012
147 Ga0163162_10000886 3300013306 Bacteria 27859
148 Ga0163162_10002634 3300013306 Bacteria 17020
149 Ga0163162_10115456 3300013306 Unclassified 2785
150 Ga0157372_10050788 3300013307 Bacteria 4613
151 Ga0157375_10018178 3300013308 Bacteria 6370
152 Ga0157375_10108088 3300013308 Bacteria 2876
153 Ga0157375_10118230 3300013308 Bacteria 2757
154 Ga0163163_10001023 3300014325 Bacteria 23694
155 Ga0163163_10002248 3300014325 Bacteria 16265
156 Ga0163163_10021191 3300014325 Bacteria 6130
157 Ga0157380_10004621 3300014326 Bacteria 9565
158 Ga0157380_10017949 3300014326 Bacteria 5246
159 Ga0157377_10006699 3300014745 Bacteria 5516
160 Ga0157379_10071540 3300014968 Unclassified 3102
161 Ga0163161_10002879 3300017792 Bacteria 12191
162 Ga0163161_10008998 3300017792 Bacteria 6905
163 Ga0163161_10044273 3300017792 Bacteria 3206
164 Ga0213876_10000236 3300021384 Bacteria 53620
165 Ga0213876_10000241 3300021384 Bacteria 52167
166 Ga0207697_10007717 3300025315 Unclassified 4768
167 Ga0207656_10002954 3300025321 Bacteria 5802
168 Ga0207653_10001441 3300025885 Bacteria 7715
169 Ga0207710_10000612 3300025900 Bacteria 20901
170 Ga0207643_10006382 3300025908 Bacteria 6313
171 Ga0207684_10000367 3300025910 Bacteria 60978
172 Ga0207684_10015136 3300025910 Bacteria 6642
173 Ga0207707_10000031 3300025912 Bacteria 159505
174 Ga0207707_10003614 3300025912 Bacteria 13712
175 Ga0207707_10007031 3300025912 Bacteria 9811
176 Ga0207695_10068226 3300025913 Unclassified 3644
177 Ga0207671_10002677 3300025914 Bacteria 18681
178 Ga0207662_10001249 3300025918 Bacteria 12225
179 Ga0207662_10003010 3300025918 Bacteria 8585
180 Ga0207652_10000063 3300025921 Bacteria 113213
181 Ga0207652_10007007 3300025921 Bacteria 9086
182 Ga0207681_10000943 3300025923 Bacteria 18952
183 Ga0207681_10021109 3300025923 Bacteria 4135
184 Ga0207694_10004212 3300025924 Bacteria 11255
185 Ga0207650_10000022 3300025925 Bacteria 318878
186 Ga0207650_10003577 3300025925 Bacteria 10659
187 Ga0207690_10006040 3300025932 Bacteria 7176
188 Ga0207706_10042686 3300025933 Bacteria 4020
189 Ga0207686_10005115 3300025934 Bacteria 7052
190 Ga0207670_10001276 3300025936 Bacteria 13298
191 Ga0207691_10004188 3300025940 Bacteria 14005
192 Ga0207691_10025504 3300025940 Bacteria 5550
193 Ga0207711_10002754 3300025941 Bacteria 15490
194 Ga0207711_10005070 3300025941 Bacteria 11170
195 Ga0207711_10014972 3300025941 Bacteria 6443
196 Ga0207689_10025780 3300025942 Bacteria 4926
197 Ga0207712_10000427 3300025961 Bacteria 35976
198 Ga0207712_10000826 3300025961 Bacteria 22730
199 Ga0207639_10002697 3300026041 Bacteria 11915
200 Ga0207639_10007394 3300026041 Bacteria 7487
201 Ga0207639_10028558 3300026041 Bacteria 4074
202 Ga0207639_10030368 3300026041 Bacteria 3963
203 Ga0207708_10000475 3300026075 Bacteria 31007
204 Ga0207708_10008233 3300026075 Bacteria 7725
205 Ga0207708_10014608 3300026075 Bacteria 5875
206 Ga0207648_10041795 3300026089 Unclassified 4026
207 Ga0207648_10069632 3300026089 Bacteria 3065
208 Ga0207676_10002189 3300026095 Bacteria 14090
209 Ga0207676_10008123 3300026095 Bacteria 7459
210 Ga0207676_10011003 3300026095 Bacteria 6459
211 Ga0207676_10015094 3300026095 Bacteria 5570
212 Ga0207674_10002619 3300026116 Bacteria 22514
213 Ga0207675_100002337 3300026118 Bacteria 18795
214 Ga0207675_100006942 3300026118 Bacteria 10711
215 Ga0207683_10007597 3300026121 Bacteria 9284
216 Ga0268264_10002786 3300028381 Bacteria 15261
217 Ga0268264_10014787 3300028381 Bacteria 6410
218 Ga0268264_10081069 3300028381 Bacteria 2772
219 Ga0307405_10016409 3300031731 Bacteria 4038
220 Ga0307405_10033400 3300031731 Bacteria 3051
221 Ga0307413_10001134 3300031824 Bacteria 9768
222 Ga0307413_10018200 3300031824 Unclassified 3679
223 Ga0307413_10020211 3300031824 Bacteria 3536
224 Ga0307410_10001289 3300031852 Bacteria 11162
225 Ga0307410_10022278 3300031852 Bacteria 3912
226 Ga0307406_10021400 3300031901 Unclassified 3824
227 Ga0307407_10001445 3300031903 Bacteria 8604
228 Ga0307407_10003468 3300031903 Bacteria 6476
229 Ga0307407_10005379 3300031903 Bacteria 5552
230 Ga0307412_10003227 3300031911 Bacteria 9071
231 Ga0307409_100008458 3300031995 Bacteria 6248
232 Ga0307409_100020384 3300031995 Bacteria 4516
233 Ga0307416_100003283 3300032002 Bacteria 9454
234 Ga0307416_100004248 3300032002 Bacteria 8602
235 Ga0307414_10002961 3300032004 Bacteria 8981
236 Ga0307414_10004113 3300032004 Bacteria 7858
237 Ga0307414_10011290 3300032004 Bacteria 5232
238 Ga0307411_10000399 3300032005 Bacteria 14841
239 Ga0307411_10001550 3300032005 Bacteria 9498
240 Ga0307411_10020301 3300032005 Bacteria 3860
241 Ga0307415_100006333 3300032126 Bacteria 6371
242 Ga0307415_100042254 3300032126 Bacteria 3033
243 Ga0395905_0006150 3300037471 Bacteria 12117
244 Ga0436365_0845597 3300039437 Bacteria 47720
245 Ga0436365_1125551 3300039437 Bacteria 52249
246 Ga0436365_1893231 3300039437 Bacteria 7916
247 Ga0439448_0014337 3300042005 Bacteria 2390
248 Ga0495668_0001634 3300046616 Bacteria 20928
249 Ga0496109_0035399 3300048912 Unclassified 4504
250 Ga0501299_000691 3300049522 Bacteria 4044
251 Ga0501038_0001729 3300049574 Bacteria 20311
252 Ga0501072_0015304 3300049588 Bacteria 5882
253 Ga0501223_001550 3300049663 Bacteria 5300
254 Ga0501224_002038 3300049664 Bacteria 2735
255 Ga0501243_000725 3300049675 Bacteria 4571
256 Ga0501249_003268 3300049679 Unclassified 3263
257 Ga0501283_000303 3300049779 Bacteria 6469
258 nmdc:mga05p37_74537_c1 3300050507 Unclassified 4177
259 nmdc:mga06r32_103568_c1 3300050510 Bacteria 2794
260 nmdc:mga08y16_160364_c1 3300050511 Bacteria 2337
261 nmdc:mga0n895_38928_c1 3300050512 Bacteria 4609
262 nmdc:mga08x19_3316_c2 3300050514 Unclassified 3276
263 nmdc:mga0a205_62154_c1 3300050515 Bacteria 3608
264 Ga0500616_0002232 3300053153 Bacteria 16566
265 LJQas_1000094
266 JGI24751J29686_10000124
267 Ga0065714_10066197
268 Ga0065712_10067792
269 Ga0065712_10072798
270 Ga0065715_10090188
271 Ga0065715_10091704
272 Ga0065707_10006234
273 Ga0070658_10004176
274 Ga0070690_100001079
275 Ga0070690_100001112
276 Ga0070690_100015713
277 Ga0070670_100001822
278 Ga0070670_100012072
279 Ga0070670_100013525
280 Ga0070670_100037383
281 Ga0070670_100068197
282 Ga0068869_100041548
283 Ga0070682_100000247
284 Ga0070682_100006339
285 Ga0068868_100020326
286 Ga0070689_100005159
287 Ga0070687_100000973
288 Ga0070692_10017835
289 Ga0070669_100001203
290 Ga0070671_100002297
291 Ga0070671_100004605
292 Ga0070659_100009653
293 Ga0070667_100018627
294 Ga0070667_100034687
295 Ga0070667_100045787
296 Ga0070705_100001506
297 Ga0070700_100000173
298 Ga0070700_100010026
299 Ga0070700_100018238
300 Ga0070708_100000149
301 Ga0070708_100023170
302 Ga0070681_10000208
303 Ga0070681_10001592
304 Ga0068867_100009390
305 Ga0068867_100042679
306 Ga0070706_100000300
307 Ga0070706_100006424
308 Ga0070706_100026640
309 Ga0070706_100062617
310 Ga0070707_100015421
311 Ga0070698_100001512
312 Ga0070698_100011452
313 Ga0070698_100020717
314 Ga0070699_100000287
315 Ga0070699_100012445
316 Ga0070699_100020986
317 Ga0070699_100071422
318 Ga0070679_100000234
319 Ga0070679_100017759
320 Ga0070684_100047909
321 Ga0070697_100000462
322 Ga0070697_100078911
323 Ga0068853_100005421
324 Ga0068853_100007224
325 Ga0070686_100005875
326 Ga0070696_100006391
327 Ga0070696_100006556
328 Ga0070693_100001493
329 Ga0070704_100002582
330 Ga0070664_100002068
331 Ga0070664_100025235
332 Ga0068857_100000167
333 Ga0070702_100000327
334 Ga0068852_100061356
335 Ga0068859_100003869
336 Ga0068859_100012775
337 Ga0068859_100019926
338 Ga0068859_100020802
339 Ga0068859_100033404
340 Ga0068859_100069094
341 Ga0068864_100003788
342 Ga0068864_100004233
343 Ga0068864_100011576
344 Ga0068864_100028661
345 Ga0068864_100043882
346 Ga0068864_100077750
347 Ga0068866_10004637
348 Ga0068861_100004957
349 Ga0068851_10005780
350 Ga0068870_10013800
351 Ga0068863_100028818
352 Ga0068858_100022588
353 Ga0068858_100052907
354 Ga0068858_100083564
355 Ga0068860_100030334
356 Ga0068860_100037655
357 Ga0068860_100038011
358 Ga0068860_100047498
359 Ga0081539_10000990
360 Ga0081539_10002488
361 Ga0097621_100004385
362 Ga0097621_100013450
363 Ga0097621_100033153
364 Ga0068871_100003267
365 Ga0068871_100003839
366 Ga0075428_100065208
367 Ga0075430_100022226
368 Ga0075431_100017295
369 Ga0075431_100113174
370 Ga0075433_10027994
371 Ga0075433_10031289
372 Ga0075433_10064124
373 Ga0075429_100003353
374 Ga0097620_100003869
375 Ga0097620_100012775
376 Ga0097620_100019926
377 Ga0097620_100020801
378 Ga0097620_100033405
379 Ga0097620_100069092
380 Ga0075435_100004812
381 Ga0111539_10004928
382 Ga0111539_10031969
383 Ga0105247_10001646
384 Ga0105247_10012620
385 Ga0114129_10000991
386 Ga0114129_10033925
387 Ga0114129_10121887
388 Ga0105243_10005960
389 Ga0105241_10029420
390 Ga0105242_10000639
391 Ga0105242_10027412
392 Ga0105248_10005524
393 Ga0105248_10006658
394 Ga0105248_10017059
395 Ga0105248_10032880
396 Ga0105248_10052606
397 Ga0105237_10001358
398 Ga0105237_10035758
399 Ga0105238_10015961
400 Ga0105238_10021887
401 Ga0105249_10000270
402 Ga0105249_10051608
403 Ga0157373_10004420
404 Ga0157373_10054330
405 Ga0157370_10025419
406 Ga0157374_10022056
407 Ga0157378_10006572
408 Ga0157378_10020777
409 Ga0157378_10028938
410 Ga0163162_10000006
411 Ga0163162_10000886
412 Ga0163162_10002634
413 Ga0163162_10115456
414 Ga0157372_10050788
415 Ga0157375_10018178
416 Ga0157375_10108088
417 Ga0157375_10118230
418 Ga0163163_10001023
419 Ga0163163_10002248
420 Ga0163163_10021191
421 Ga0157380_10004621
422 Ga0157380_10017949
423 Ga0157377_10006699
424 Ga0157379_10071540
425 Ga0163161_10002879
426 Ga0163161_10008998
427 Ga0163161_10044273
428 Ga0213876_10000236
429 Ga0213876_10000241
430 Ga0207697_10007717
431 Ga0207656_10002954
432 Ga0207653_10001441
433 Ga0207710_10000612
434 Ga0207643_10006382
435 Ga0207684_10000367
436 Ga0207684_10015136
437 Ga0207707_10000031
438 Ga0207707_10003614
439 Ga0207707_10007031
440 Ga0207695_10068226
441 Ga0207671_10002677
442 Ga0207662_10001249
443 Ga0207662_10003010
444 Ga0207652_10000063
445 Ga0207652_10007007
446 Ga0207681_10000943
447 Ga0207681_10021109
448 Ga0207694_10004212
449 Ga0207650_10000022
450 Ga0207650_10003577
451 Ga0207690_10006040
452 Ga0207706_10042686
453 Ga0207686_10005115
454 Ga0207670_10001276
455 Ga0207691_10004188
456 Ga0207691_10025504
457 Ga0207711_10002754
458 Ga0207711_10005070
459 Ga0207711_10014972
460 Ga0207689_10025780
461 Ga0207712_10000427
462 Ga0207712_10000826
463 Ga0207639_10002697
464 Ga0207639_10007394
465 Ga0207639_10028558
466 Ga0207639_10030368
467 Ga0207708_10000475
468 Ga0207708_10008233
469 Ga0207708_10014608
470 Ga0207648_10041795
471 Ga0207648_10069632
472 Ga0207676_10002189
473 Ga0207676_10008123
474 Ga0207676_10011003
475 Ga0207676_10015094
476 Ga0207674_10002619
477 Ga0207675_100002337
478 Ga0207675_100006942
479 Ga0207683_10007597
480 Ga0268264_10002786
481 Ga0268264_10014787
482 Ga0268264_10081069
483 Ga0307405_10016409
484 Ga0307405_10033400
485 Ga0307413_10001134
486 Ga0307413_10018200
487 Ga0307413_10020211
488 Ga0307410_10001289
489 Ga0307410_10022278
490 Ga0307406_10021400
491 Ga0307407_10001445
492 Ga0307407_10003468
493 Ga0307407_10005379
494 Ga0307412_10003227
495 Ga0307409_100008458
496 Ga0307409_100020384
497 Ga0307416_100003283
498 Ga0307416_100004248
499 Ga0307414_10002961
500 Ga0307414_10004113
501 Ga0307414_10011290
502 Ga0307411_10000399
503 Ga0307411_10001550
504 Ga0307411_10020301
505 Ga0307415_100006333
506 Ga0307415_100042254
507 Ga0395905_0006150
508 Ga0436365_0845597
509 Ga0436365_1125551
510 Ga0436365_1893231
511 Ga0439448_0014337
512 Ga0495668_0001634
513 Ga0496109_0035399
514 Ga0501299_000691
515 Ga0501038_0001729
516 Ga0501072_0015304
517 Ga0501223_001550
518 Ga0501224_002038
519 Ga0501243_000725
520 Ga0501249_003268
521 Ga0501283_000303
522 nmdc:mga05p37_74537_c1
523 nmdc:mga06r32_103568_c1
524 nmdc:mga08y16_160364_c1
525 nmdc:mga0n895_38928_c1
526 nmdc:mga08x19_3316_c2
527 nmdc:mga0a205_62154_c1
528 Ga0500616_0002232

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07698

7TM-7TMR_HD

7TM receptor with intracellular HD hydrolase

341

549

0.93

PF01966

HD

HD domain

574

718

0.91

PF07697

7TMR-HDED

7TM-HD extracellular

91

334

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4s1c-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain 0.9669 562 773
4s1b-assembly3.cif.gz_D-2 crystal structure of l. monocytogenes phosphodiesterase pgph hd domain in complex with cyclic-di-amp 0.9645 562 772
4s1c-assembly3.cif.gz_D-2 crystal structure of l. monocytogenes phosphodiesterase pgph hd domain 0.9566 562 773
4s1b-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain in complex with cyclic-di-amp 0.9543 562 778
4s1c-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain 0.9532 562 773
ID Description Score Start End Superfamily
af_Q58188_1_153_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.6446 562 736 1.10.3210.10
af_Q2FZ08_320_474_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.6385 563 748 1.10.3210.10
5kc4E00 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.6147 387 534 1.10.1760.20
3p5nB00 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.6096 388 543 1.10.1760.20
af_Q58188_1_153_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.5961 562 736 1.10.3210.10
ID Description Score Start End GO Terms
AF-A0A5C8MF40-F1-model_v4 HDIG domain-containing protein 0.9615 547 709
AF-X1CL80-F1-model_v4 HD domain-containing protein 0.9578 548 766
AF-A0A535S5B5-F1-model_v4 HDIG domain-containing protein 0.9545 562 713
AF-A0A150KF17-F1-model_v4 HD domain-containing protein 0.9509 489 753 GO:0016020
AF-A0A5C8MF40-F1-model_v4 HDIG domain-containing protein 0.9499 547 709

Map