F371960

General Info

Members Datasets Scaffolds Average Seq Length
263 213 526 638

Family's Representative Sequence

Representative Sequence 3300030522|Ga0307512_10022617|Ga0307512_100226172
Length 714
Sequence MRVHLVTMPWHPIDLPSLQVGLLHALLARTRPQDEVREFHGSLRWAEFLLERSGGRLRPGDYVRVGSDSIFHGLGDWVFSGVLYDDPDWGTERLRDYAERHALTVDTAREMRAHAAEFITECADAVLADEPDVVGFTTTFMQNVSSLALARELKRRRPQSAVVLGGSNCDGPMGHALHRNHRFVDQVVRGEGEYAFPALLRHLDEGTPPADVPGLCWWDGERSRANEESRRTVAPADIPSPDYDQWQTALDASPVAEYVHPKLVVEGARGCWWGEKHHCTFCGLNGSAMAFRAKPGGRLWSEIDRLVRRHRILDIVTVDNIIDMAYFKDFLPRAAASGWDLRMHYEVKSNLTRDQLALLADSGTVHIQPGIESLGSRVLDLMDKGVTGARNIRTLRECENHSLTCSWNLLYGFPGESAEDYTAVIDQLPALVHLQPPGGAHRIQLERFSPHFDDPGLGFGKRGPAEMYQHVYDLPESELADLVYLFDTEDAGIGGEAEARLKEGVERWLTGHPGSRLTFTEDCDALLVHDRREGWPHRTHRFTGWRAAALRRLEDGRNAGALHRLLTDDGHRIAAEVLDEWLQQAVTLGLLFRDGRTYVSLPTWRVPVRMDDGSVTGPSAGYVSGMLYYRRGPGFVTVMDRRDSGSSARYTLDDPDVLSAFDTLQVPTRLEELTEVQREAASLLAGEGLVRLTDGRAVALPPRIGRWPVPCTGI

Samples

Sample ID Description Type Environment
1 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
101 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
102 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
103 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
138 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
143 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
144 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
150 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
151 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
172 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
173 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
174 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
177 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
178 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
182 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
183 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
184 2517572101 Frankia sp. DC12 Isolate Nodule
185 2558860280 Kutzneria sp. 744 Isolate Unclassified
186 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
187 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
188 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
189 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
190 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
191 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
192 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
193 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
194 2855683550 Micromonospora sp. RP3T Isolate Unclassified
195 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
196 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
197 2867475112 Streptomyces sp. TM32 Isolate Unclassified
198 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
199 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
200 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
201 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
202 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
203 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
204 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
205 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
206 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
207 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
208 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
209 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
210 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
211 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
212 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule
213 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.93
Metatranscriptomes 1.14
Isolates 12.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.42
Nodule 1.14
Rhizoplane 0.76
Rhizosphere 82.89
Stem 0
Stem Tuber 0
Unclassified 4.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307512_10022617 3300030522 Bacteria 5640
2 MRS1b_contig_1217430 2162886011 Bacteria 10404
3 MBSR1b_contig_9330213 2162886012 Bacteria 10404
4 JGI24737J22298_10009699 3300001990 Bacteria 3192
5 JGI25406J46586_10006086 3300003203 Bacteria 5575
6 Ga0058862_12485250 3300004803 Bacteria 5492
7 Ga0065714_10002189 3300005288 Bacteria 128055
8 Ga0065712_10067733 3300005290 Bacteria 118568
9 Ga0065707_10090022 3300005295 Bacteria 4228
10 Ga0070676_10024387 3300005328 Bacteria 3407
11 Ga0070683_100093565 3300005329 Bacteria 2824
12 Ga0070683_100115405 3300005329 Unclassified 2535
13 Ga0070682_100019471 3300005337 Unclassified 3981
14 Ga0068868_100056667 3300005338 Bacteria 3095
15 Ga0070688_100000109 3300005365 Bacteria 42946
16 Ga0070703_10008344 3300005406 Bacteria 2912
17 Ga0070714_100079009 3300005435 Bacteria 2860
18 Ga0070694_100033918 3300005444 Unclassified 3363
19 Ga0070708_100081376 3300005445 Bacteria 2932
20 Ga0070663_100016518 3300005455 Bacteria 4798
21 Ga0070681_10009275 3300005458 Bacteria 9675
22 Ga0070685_10000181 3300005466 Bacteria 42077
23 Ga0070706_100000264 3300005467 Bacteria 63788
24 Ga0070706_100011201 3300005467 Bacteria 8328
25 Ga0070707_100000412 3300005468 Bacteria 42244
26 Ga0070707_100003567 3300005468 Bacteria 14686
27 Ga0070698_100037801 3300005471 Unclassified 4977
28 Ga0070699_100044745 3300005518 Unclassified 3832
29 Ga0070684_100027762 3300005535 Bacteria 4781
30 Ga0070697_100004081 3300005536 Bacteria 11196
31 Ga0070697_100033018 3300005536 Unclassified 4167
32 Ga0068853_100052595 3300005539 Bacteria 3508
33 Ga0070695_100002417 3300005545 Bacteria 10729
34 Ga0070695_100027037 3300005545 Bacteria 3552
35 Ga0070696_100004884 3300005546 Bacteria 8955
36 Ga0070665_100004416 3300005548 Bacteria 14774
37 Ga0070665_100089962 3300005548 Bacteria 3075
38 Ga0068855_100002781 3300005563 Bacteria 21534
39 Ga0068855_100141229 3300005563 Bacteria 2745
40 Ga0068854_100017024 3300005578 Bacteria 4858
41 Ga0068859_100005768 3300005617 Bacteria 12587
42 Ga0068864_100125185 3300005618 Bacteria 2302
43 Ga0068851_10007503 3300005834 Bacteria 5011
44 Ga0068862_100007930 3300005844 Bacteria 8783
45 Ga0081455_10000365 3300005937 Bacteria 59750
46 Ga0081539_10001807 3300005985 Bacteria 33824
47 Ga0070717_10086851 3300006028 Unclassified 2634
48 Ga0097621_100002971 3300006237 Bacteria 11640
49 Ga0068871_100002453 3300006358 Bacteria 12663
50 Ga0075428_100000033 3300006844 Bacteria 117013
51 Ga0075428_100011564 3300006844 Bacteria 9817
52 Ga0097620_100005768 3300006931 Bacteria 12587
53 Ga0075435_100001650 3300007076 Bacteria 14474
54 Ga0075435_100017277 3300007076 Bacteria 5457
55 Ga0075435_100038465 3300007076 Bacteria 3814
56 Ga0105240_10022250 3300009093 Bacteria 8410
57 Ga0105240_10049179 3300009093 Bacteria 5323
58 Ga0111539_10056266 3300009094 Unclassified 4675
59 Ga0105245_10073514 3300009098 Bacteria 3109
60 Ga0114129_10000122 3300009147 Bacteria 78726
61 Ga0114129_10038848 3300009147 Bacteria 6710
62 Ga0114129_10179889 3300009147 Unclassified 2878
63 Ga0105241_10001293 3300009174 Bacteria 19059
64 Ga0105242_10007230 3300009176 Bacteria 8559
65 Ga0105248_10036007 3300009177 Bacteria 5536
66 Ga0105248_10098988 3300009177 Bacteria 3285
67 Ga0105237_10000843 3300009545 Bacteria 41798
68 Ga0105237_10011022 3300009545 Bacteria 9592
69 Ga0105238_10024245 3300009551 Bacteria 6184
70 Ga0157374_10068191 3300013296 Bacteria 3346
71 Ga0157372_10021242 3300013307 Bacteria 7013
72 Ga0163163_10003779 3300014325 Bacteria 12897
73 Ga0157379_10019377 3300014968 Bacteria 6009
74 Ga0157376_10009741 3300014969 Bacteria 6996
75 Ga0206352_10298413 3300020078 Bacteria 4140
76 Ga0213875_10000637 3300021388 Bacteria 27944
77 Ga0209233_1004483 3300025261 Bacteria 4740
78 Ga0207426_1000885 3300025302 Bacteria 30850
79 Ga0207426_1000954 3300025302 Bacteria 28530
80 Ga0207647_10015089 3300025904 Bacteria 5307
81 Ga0207684_10000823 3300025910 Bacteria 35741
82 Ga0207654_10024151 3300025911 Bacteria 3265
83 Ga0207695_10006364 3300025913 Bacteria 15360
84 Ga0207671_10005752 3300025914 Bacteria 11294
85 Ga0207671_10054259 3300025914 Bacteria 2970
86 Ga0207646_10000452 3300025922 Bacteria 54741
87 Ga0207646_10005384 3300025922 Bacteria 13466
88 Ga0207646_10015384 3300025922 Bacteria 7227
89 Ga0207694_10006604 3300025924 Bacteria 8817
90 Ga0207664_10072556 3300025929 Unclassified 2775
91 Ga0207711_10058489 3300025941 Bacteria 3317
92 Ga0207667_10129895 3300025949 Bacteria 2595
93 Ga0207668_10010300 3300025972 Bacteria 5646
94 Ga0207640_10013354 3300025981 Bacteria 4703
95 Ga0207678_10012434 3300026067 Bacteria 7472
96 Ga0207641_10046475 3300026088 Bacteria 3660
97 Ga0207648_10019327 3300026089 Bacteria 6148
98 Ga0207676_10062926 3300026095 Bacteria 2945
99 Ga0207428_10014327 3300027907 Bacteria 6899
100 Ga0268266_10007356 3300028379 Bacteria 9946
101 Ga0268266_10063406 3300028379 Bacteria 3190
102 Ga0268265_10069910 3300028380 Bacteria 2728
103 Ga0307517_10012599 3300028786 Bacteria 11582
104 Ga0307515_10015879 3300028794 Bacteria 13839
105 Ga0307515_10019969 3300028794 Bacteria 12000
106 Ga0307515_10062568 3300028794 Bacteria 5251
107 Ga0307511_10019924 3300030521 Bacteria 6368
108 Ga0265760_10004915 3300031090 Bacteria 3824
109 Ga0307513_10058849 3300031456 Bacteria 4081
110 Ga0307508_10011669 3300031616 Bacteria 8032
111 Ga0316579_10002109 3300031691 Bacteria 7455
112 Ga0307516_10000276 3300031730 Bacteria 66471
113 Ga0307415_100028318 3300032126 Bacteria 3563
114 Ga0307507_10038526 3300033179 Bacteria 4842
115 Ga0307507_10046911 3300033179 Bacteria 4228
116 Ga0307510_10000658 3300033180 Bacteria 35071
117 Ga0373937_0082087 3300036401 Bacteria 2982
118 Ga0395900_0072344 3300037418 Bacteria 3545
119 Ga0395898_0041742 3300037466 Bacteria 4529
120 Ga0395905_0002408 3300037471 Bacteria 20790
121 Ga0436364_0549501 3300037853 Bacteria 49151
122 Ga0436364_0934980 3300037853 Bacteria 5304
123 Ga0436365_1111266 3300039437 Bacteria 7218
124 Ga0451853_0341563 3300041512 Bacteria 9470
125 Ga0439448_0003674 3300042005 Bacteria 4268
126 Ga0450903_001481 3300042138 Bacteria 4373
127 Ga0439458_0006740 3300042157 Bacteria 2559
128 Ga0466966_0014762 3300044684 Bacteria 5167
129 Ga0466966_0028541 3300044684 Bacteria 3633
130 Ga0466957_0001472 3300044842 Bacteria 12357
131 Ga0466959_0028958 3300045049 Bacteria 4103
132 Ga0466959_0106873 3300045049 Bacteria 2001
133 Ga0466958_0000046 3300045836 Bacteria 36245
134 Ga0466967_0067333 3300045976 Bacteria 3194
135 Ga0495592_0016079 3300046454 Bacteria 5678
136 Ga0495603_0000412 3300046455 Bacteria 23683
137 Ga0495603_0002687 3300046455 Bacteria 10485
138 Ga0495603_0035610 3300046455 Bacteria 2989
139 Ga0495629_0000886 3300046459 Bacteria 24144
140 Ga0495629_0003020 3300046459 Bacteria 12807
141 Ga0495629_0044269 3300046459 Bacteria 3124
142 Ga0495638_0017890 3300046460 Bacteria 4717
143 Ga0495651_0017718 3300046462 Bacteria 5514
144 Ga0495651_0019929 3300046462 Bacteria 5203
145 Ga0495580_0000327 3300046472 Bacteria 39015
146 Ga0495605_0002701 3300046474 Bacteria 10851
147 Ga0495662_0004490 3300046476 Bacteria 7001
148 Ga0495662_0027368 3300046476 Bacteria 2755
149 Ga0495664_0006371 3300046477 Bacteria 6522
150 Ga0495594_0001881 3300046499 Bacteria 10923
151 Ga0495606_0028237 3300046507 Bacteria 3962
152 Ga0495610_0003767 3300046512 Bacteria 11594
153 Ga0495616_0021960 3300046513 Bacteria 3449
154 Ga0495620_0010706 3300046515 Bacteria 4827
155 Ga0495628_0014952 3300046516 Bacteria 6491
156 Ga0495643_0014298 3300046522 Bacteria 4726
157 Ga0495648_0008255 3300046524 Bacteria 8212
158 Ga0495640_0027836 3300046533 Bacteria 4072
159 Ga0495587_0007364 3300046536 Bacteria 7133
160 Ga0495587_0030716 3300046536 Bacteria 3258
161 Ga0495621_0000146 3300046539 Bacteria 15283
162 Ga0495597_0005178 3300046542 Bacteria 6944
163 Ga0495597_0022529 3300046542 Bacteria 2921
164 Ga0495645_0017093 3300046543 Bacteria 5195
165 Ga0495645_0102137 3300046543 Bacteria 2038
166 Ga0495668_0006886 3300046616 Bacteria 7365
167 Ga0495668_0025328 3300046616 Bacteria 3372
168 Ga0495634_0008911 3300046642 Bacteria 7433
169 Ga0495625_0004445 3300046660 Bacteria 13252
170 Ga0495625_0075732 3300046660 Bacteria 2354
171 Ga0495635_0002600 3300046663 Bacteria 12357
172 Ga0495635_0008436 3300046663 Bacteria 7196
173 Ga0495661_0006273 3300046665 Bacteria 8361
174 Ga0495588_0001842 3300046674 Bacteria 9037
175 Ga0495599_0081605 3300046678 Bacteria 2020
176 Ga0495646_0001882 3300046680 Bacteria 12613
177 Ga0495613_0002878 3300046689 Bacteria 12885
178 Ga0495613_0011294 3300046689 Bacteria 6635
179 Ga0495613_0089377 3300046689 Bacteria 2232
180 Ga0495624_0005865 3300046690 Bacteria 8783
181 Ga0495649_0012170 3300046694 Bacteria 5018
182 Ga0495581_0008152 3300047315 Bacteria 6065
183 Ga0495604_0000582 3300047317 Bacteria 31932
184 Ga0495636_0016802 3300047318 Bacteria 2926
185 Ga0495676_0008648 3300047321 Bacteria 9321
186 Ga0495676_0014279 3300047321 Bacteria 7107
187 Ga0495676_0025034 3300047321 Bacteria 5156
188 Ga0495687_033317 3300047443 Bacteria 2338
189 Ga0495681_0003298 3300047470 Bacteria 11244
190 Ga0495686_0016105 3300047472 Bacteria 5080
191 Ga0495593_0007655 3300047673 Bacteria 6305
192 Ga0495602_0018850 3300048088 Bacteria 6872
193 Ga0495602_0068738 3300048088 Unclassified 3041
194 Ga0495614_0000690 3300048089 Bacteria 14200
195 Ga0495614_0003900 3300048089 Bacteria 6700
196 Ga0495614_0020939 3300048089 Bacteria 2826
197 Ga0495626_0003848 3300048091 Bacteria 9418
198 Ga0496100_0025578 3300048903 Bacteria 3612
199 Ga0496112_0048942 3300048915 Bacteria 4142
200 Ga0495678_005707 3300049459 Bacteria 6771
201 Ga0501033_0002009 3300049570 Bacteria 17714
202 Ga0501036_0067389 3300049572 Bacteria 3028
203 Ga0501038_0004462 3300049574 Bacteria 13008
204 Ga0501038_0011598 3300049574 Bacteria 8041
205 Ga0501040_0005128 3300049576 Bacteria 8471
206 Ga0501041_0006565 3300049577 Bacteria 6811
207 Ga0501047_0022059 3300049581 Bacteria 6117
208 Ga0501072_0024538 3300049588 Bacteria 4691
209 Ga0501075_0075049 3300049591 Bacteria 2557
210 Ga0501077_0005680 3300049593 Bacteria 7606
211 Ga0501079_0027046 3300049741 Bacteria 4397
212 Ga0501081_0062728 3300049743 Bacteria 2578
213 Ga0501035_0014637 3300049822 Bacteria 7243
214 nmdc:mga05p37_10255_c1 3300050507 Bacteria 11127
215 nmdc:mga05p37_125801_c1 3300050507 Unclassified 3148
216 nmdc:mga05p37_7293_c1 3300050507 Bacteria 13045
217 nmdc:mga06r32_22768_c1 3300050510 Bacteria 5794
218 nmdc:mga08y16_43233_c1 3300050511 Plasmid 4721
219 Ga0495601_0008211 3300053077 Bacteria 6159
220 Ga0495612_0000717 3300053078 Bacteria 13443
221 Ga0500640_023470 3300053095 Bacteria 2673
222 Ga0500569_002154 3300053109 Bacteria 3835
223 Ga0500595_002837 3300053119 Bacteria 8330
224 Ga0500559_0017893 3300053136 Bacteria 2995
225 Ga0500625_005702 3300053729 Bacteria 5236
226 Ga0500596_000412 3300053735 Bacteria 7837
227 Ga0501084_0004687 3300054114 Bacteria 11167
228 Ga0501082_0062049 3300060353 Bacteria 3217
229 Ga0530510_0008863 3300061734 Bacteria 7040
230 2515719473 2515154129 Bacteria 5584369
231 2516083812 2515154202 Bacteria 5471270
232 2517764347 2517572101 Bacteria 6884336
233 2559423268 2558860280 Bacteria 11429938
234 2616905692 2616644941 Bacteria 8510691
235 2786666807 2786546132 Bacteria 10419719
236 2791913332 2791354901 Bacteria 8322202
237 2791914927 2791354901 Bacteria 8322202
238 2795785101 2795385470 Bacteria 8317180
239 2795792380 2795385472 Bacteria 6627535
240 2808845888 2808606359 Bacteria 9866990
241 2808914174 2808606375 Bacteria 9466072
242 2811842620 2808606982 Bacteria 7791042
243 2855687608 2855683550 Bacteria 7134265
244 2858906887 2858902515 Bacteria 7086037
245 2866552073 2866552031 Bacteria 5824618
246 2867475872 2867475112 Bacteria 6909112
247 2873317856 2873314349 Bacteria 8512634
248 2879164794 2879163058 Bacteria 4223965
249 2935775731 2935769743 Bacteria 7878163
250 2947232285 2947224130 Bacteria 9938529
251 2954681892 2954673503 Bacteria 9685905
252 2954691032 2954682443 Bacteria 9862841
253 2990089535 2990088156 Bacteria 6657676
254 2997603754 2997600082 Bacteria 9896405
255 3006493862 3006486233 Bacteria 8157040
256 8003859306 8003856774 Bacteria 7675274
257 8008576588 8008574985 Bacteria 7815457
258 8047710756 8047710418 Bacteria 11023148
259 8053947649 8053945823 Bacteria 8962862
260 8053948348 8053945823 Bacteria 8962862
261 8055066230 8055066027 Bacteria 9479577
262 8055307589 8055301274 Bacteria 8587385
263 8056061483 8056060235 Bacteria 7259403
264 Ga0307512_10022617
265 MRS1b_contig_1217430
266 MBSR1b_contig_9330213
267 JGI24737J22298_10009699
268 JGI25406J46586_10006086
269 Ga0058862_12485250
270 Ga0065714_10002189
271 Ga0065712_10067733
272 Ga0065707_10090022
273 Ga0070676_10024387
274 Ga0070683_100093565
275 Ga0070683_100115405
276 Ga0070682_100019471
277 Ga0068868_100056667
278 Ga0070688_100000109
279 Ga0070703_10008344
280 Ga0070714_100079009
281 Ga0070694_100033918
282 Ga0070708_100081376
283 Ga0070663_100016518
284 Ga0070681_10009275
285 Ga0070685_10000181
286 Ga0070706_100000264
287 Ga0070706_100011201
288 Ga0070707_100000412
289 Ga0070707_100003567
290 Ga0070698_100037801
291 Ga0070699_100044745
292 Ga0070684_100027762
293 Ga0070697_100004081
294 Ga0070697_100033018
295 Ga0068853_100052595
296 Ga0070695_100002417
297 Ga0070695_100027037
298 Ga0070696_100004884
299 Ga0070665_100004416
300 Ga0070665_100089962
301 Ga0068855_100002781
302 Ga0068855_100141229
303 Ga0068854_100017024
304 Ga0068859_100005768
305 Ga0068864_100125185
306 Ga0068851_10007503
307 Ga0068862_100007930
308 Ga0081455_10000365
309 Ga0081539_10001807
310 Ga0070717_10086851
311 Ga0097621_100002971
312 Ga0068871_100002453
313 Ga0075428_100000033
314 Ga0075428_100011564
315 Ga0097620_100005768
316 Ga0075435_100001650
317 Ga0075435_100017277
318 Ga0075435_100038465
319 Ga0105240_10022250
320 Ga0105240_10049179
321 Ga0111539_10056266
322 Ga0105245_10073514
323 Ga0114129_10000122
324 Ga0114129_10038848
325 Ga0114129_10179889
326 Ga0105241_10001293
327 Ga0105242_10007230
328 Ga0105248_10036007
329 Ga0105248_10098988
330 Ga0105237_10000843
331 Ga0105237_10011022
332 Ga0105238_10024245
333 Ga0157374_10068191
334 Ga0157372_10021242
335 Ga0163163_10003779
336 Ga0157379_10019377
337 Ga0157376_10009741
338 Ga0206352_10298413
339 Ga0213875_10000637
340 Ga0209233_1004483
341 Ga0207426_1000885
342 Ga0207426_1000954
343 Ga0207647_10015089
344 Ga0207684_10000823
345 Ga0207654_10024151
346 Ga0207695_10006364
347 Ga0207671_10005752
348 Ga0207671_10054259
349 Ga0207646_10000452
350 Ga0207646_10005384
351 Ga0207646_10015384
352 Ga0207694_10006604
353 Ga0207664_10072556
354 Ga0207711_10058489
355 Ga0207667_10129895
356 Ga0207668_10010300
357 Ga0207640_10013354
358 Ga0207678_10012434
359 Ga0207641_10046475
360 Ga0207648_10019327
361 Ga0207676_10062926
362 Ga0207428_10014327
363 Ga0268266_10007356
364 Ga0268266_10063406
365 Ga0268265_10069910
366 Ga0307517_10012599
367 Ga0307515_10015879
368 Ga0307515_10019969
369 Ga0307515_10062568
370 Ga0307511_10019924
371 Ga0265760_10004915
372 Ga0307513_10058849
373 Ga0307508_10011669
374 Ga0316579_10002109
375 Ga0307516_10000276
376 Ga0307415_100028318
377 Ga0307507_10038526
378 Ga0307507_10046911
379 Ga0307510_10000658
380 Ga0373937_0082087
381 Ga0395900_0072344
382 Ga0395898_0041742
383 Ga0395905_0002408
384 Ga0436364_0549501
385 Ga0436364_0934980
386 Ga0436365_1111266
387 Ga0451853_0341563
388 Ga0439448_0003674
389 Ga0450903_001481
390 Ga0439458_0006740
391 Ga0466966_0014762
392 Ga0466966_0028541
393 Ga0466957_0001472
394 Ga0466959_0028958
395 Ga0466959_0106873
396 Ga0466958_0000046
397 Ga0466967_0067333
398 Ga0495592_0016079
399 Ga0495603_0000412
400 Ga0495603_0002687
401 Ga0495603_0035610
402 Ga0495629_0000886
403 Ga0495629_0003020
404 Ga0495629_0044269
405 Ga0495638_0017890
406 Ga0495651_0017718
407 Ga0495651_0019929
408 Ga0495580_0000327
409 Ga0495605_0002701
410 Ga0495662_0004490
411 Ga0495662_0027368
412 Ga0495664_0006371
413 Ga0495594_0001881
414 Ga0495606_0028237
415 Ga0495610_0003767
416 Ga0495616_0021960
417 Ga0495620_0010706
418 Ga0495628_0014952
419 Ga0495643_0014298
420 Ga0495648_0008255
421 Ga0495640_0027836
422 Ga0495587_0007364
423 Ga0495587_0030716
424 Ga0495621_0000146
425 Ga0495597_0005178
426 Ga0495597_0022529
427 Ga0495645_0017093
428 Ga0495645_0102137
429 Ga0495668_0006886
430 Ga0495668_0025328
431 Ga0495634_0008911
432 Ga0495625_0004445
433 Ga0495625_0075732
434 Ga0495635_0002600
435 Ga0495635_0008436
436 Ga0495661_0006273
437 Ga0495588_0001842
438 Ga0495599_0081605
439 Ga0495646_0001882
440 Ga0495613_0002878
441 Ga0495613_0011294
442 Ga0495613_0089377
443 Ga0495624_0005865
444 Ga0495649_0012170
445 Ga0495581_0008152
446 Ga0495604_0000582
447 Ga0495636_0016802
448 Ga0495676_0008648
449 Ga0495676_0014279
450 Ga0495676_0025034
451 Ga0495687_033317
452 Ga0495681_0003298
453 Ga0495686_0016105
454 Ga0495593_0007655
455 Ga0495602_0018850
456 Ga0495602_0068738
457 Ga0495614_0000690
458 Ga0495614_0003900
459 Ga0495614_0020939
460 Ga0495626_0003848
461 Ga0496100_0025578
462 Ga0496112_0048942
463 Ga0495678_005707
464 Ga0501033_0002009
465 Ga0501036_0067389
466 Ga0501038_0004462
467 Ga0501038_0011598
468 Ga0501040_0005128
469 Ga0501041_0006565
470 Ga0501047_0022059
471 Ga0501072_0024538
472 Ga0501075_0075049
473 Ga0501077_0005680
474 Ga0501079_0027046
475 Ga0501081_0062728
476 Ga0501035_0014637
477 nmdc:mga05p37_10255_c1
478 nmdc:mga05p37_125801_c1
479 nmdc:mga05p37_7293_c1
480 nmdc:mga06r32_22768_c1
481 nmdc:mga08y16_43233_c1
482 Ga0495601_0008211
483 Ga0495612_0000717
484 Ga0500640_023470
485 Ga0500569_002154
486 Ga0500595_002837
487 Ga0500559_0017893
488 Ga0500625_005702
489 Ga0500596_000412
490 Ga0501084_0004687
491 Ga0501082_0062049
492 Ga0530510_0008863
493 2515719473
494 2516083812
495 2517764347
496 2559423268
497 2616905692
498 2786666807
499 2791913332
500 2791914927
501 2795785101
502 2795792380
503 2808845888
504 2808914174
505 2811842620
506 2855687608
507 2858906887
508 2866552073
509 2867475872
510 2873317856
511 2879164794
512 2935775731
513 2947232285
514 2954681892
515 2954691032
516 2990089535
517 2997603754
518 3006493862
519 8003859306
520 8008576588
521 8047710756
522 8053947649
523 8053948348
524 8055066230
525 8055307589
526 8056061483

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

265

428

0.9

PF19142

DUF5825

Family of unknown function (DUF5825)

602

714

0.86

PF02310

B12-binding

B12 binding domain

78

200

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wq2-assembly1.cif.gz_A neutron crystal structure of dissimilatory sulfite reductase d (dsrd) 0.8143 549 603
1wq2-assembly1.cif.gz_B neutron crystal structure of dissimilatory sulfite reductase d (dsrd) 0.7746 549 603
2yxb-assembly1.cif.gz_A crystal structure of the methylmalonyl-coa mutase alpha-subunit from aeropyrum pernix 0.7458 145 232
4lda-assembly7.cif.gz_G crystal structure of a chey-like protein (tadz) from pseudomonas aeruginosa pao1 at 2.70 a resolution 0.7186 145 229
4lda-assembly8.cif.gz_H crystal structure of a chey-like protein (tadz) from pseudomonas aeruginosa pao1 at 2.70 a resolution 0.7124 145 229
ID Description Score Start End Superfamily
af_Q9QY24_7_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9035 552 603 1.10.10.10
af_P0ACK8_1_59_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8777 551 603 1.10.10.10
af_Q9H171_1_74_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8576 552 606 1.10.10.10
af_Q874R3_599_681_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8572 563 603 1.10.10.10
4g6qB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8528 552 604 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A848GX07-F1-model_v4 RiPP maturation radical SAM protein 1 0.9479 9 632 GO:0003824
GO:0005829
GO:0031419
GO:0046872
GO:0051536
AF-W4M8X9-F1-model_v4 Radical SAM core domain-containing protein 0.9431 328 607 GO:0003824
GO:0005829
GO:0051536
AF-A0A3R7R9I4-F1-model_v4 deleted 0.9316 14 228
AF-A0A023X8U9-F1-model_v4 deleted 0.9262 258 611
AF-A0A3M1RWY4-F1-model_v4 ATP-binding protein 0.9254 414 607

Map