F371820

General Info

Members Datasets Scaffolds Average Seq Length
263 167 526 187

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10822411|Ga0105240_108224111
Length 212
Sequence MADRAGMVKAQPCEATPAAPSRRVMQNISFAAADPTGWHGTTILCVRRDGHVTMAGDGQVSMGQTIVKGNARKVRRIGAGAAVLAGFAGATADAFTLLERLESKLERFPGQLERACVELAKDWRTDRYLRRLEAMMAVADKDRSFTLTGTGDVLEPEDGVIAIGSGGNYALAAARALMSVDGLSAEEIARRAMKIAAEICVYTNDNVIVETI

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
4 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
36 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
56 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
57 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
65 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
66 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
67 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
68 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
69 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
86 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
149 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
155 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
156 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
157 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
158 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
159 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
160 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
161 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
162 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
163 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
164 641522639 Methylobacterium sp. 4-46 Isolate Nodule
165 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
166 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
167 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.92
Metatranscriptomes 0.76
Isolates 5.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.66
Nodule 1.14
Rhizoplane 9.51
Rhizosphere 65.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10822411 3300009093 Bacteria 1005
2 JGI25151J46595_10010550 3300003187 Bacteria 4282
3 Ga0055535_1001510 3300003761 Bacteria 11554
4 Ga0055541_1000159 3300003841 Bacteria 33167
5 Ga0070658_10066490 3300005327 Bacteria 2945
6 Ga0070680_100319924 3300005336 Bacteria 1317
7 Ga0070660_100072137 3300005339 Bacteria 2697
8 Ga0070675_100727138 3300005354 Bacteria 905
9 Ga0070673_100509082 3300005364 Bacteria 1090
10 Ga0070659_100167434 3300005366 Bacteria 1799
11 Ga0070709_10170432 3300005434 Bacteria 1521
12 Ga0070714_100096875 3300005435 Bacteria 2593
13 Ga0070714_100572562 3300005435 Bacteria 1083
14 Ga0070679_100116870 3300005530 Bacteria 2652
15 Ga0070693_100171215 3300005547 Bacteria 1391
16 Ga0070665_100112222 3300005548 Bacteria 2729
17 Ga0070665_100162672 3300005548 Bacteria 2234
18 Ga0070665_100718894 3300005548 Bacteria 1012
19 Ga0068856_100225874 3300005614 Bacteria 1888
20 Ga0068856_100740767 3300005614 Bacteria 1003
21 Ga0068856_101027995 3300005614 Bacteria 842
22 Ga0068861_100399746 3300005719 Bacteria 1219
23 Ga0068862_101033980 3300005844 Bacteria 814
24 Ga0070717_10184544 3300006028 Bacteria 1820
25 Ga0070717_10735440 3300006028 Bacteria 897
26 Ga0105240_10441884 3300009093 Bacteria 1457
27 Ga0105245_10176677 3300009098 Bacteria 2037
28 Ga0105247_10523099 3300009101 Bacteria 868
29 Ga0105248_10362506 3300009177 Bacteria 1632
30 Ga0105237_10909454 3300009545 Bacteria 887
31 Ga0105246_11024733 3300011119 Bacteria 749
32 Ga0157370_10182963 3300013104 Bacteria 1947
33 Ga0157369_10438135 3300013105 Bacteria 1354
34 Ga0157374_10301111 3300013296 Bacteria 1586
35 Ga0163162_10727484 3300013306 Bacteria 1113
36 Ga0163163_10003018 3300014325 Bacteria 14254
37 Ga0163163_10046997 3300014325 Bacteria 4241
38 Ga0182008_10053741 3300014497 Bacteria 1994
39 Ga0157379_10625502 3300014968 Bacteria 1006
40 Ga0157376_10370209 3300014969 Bacteria 1377
41 Ga0213876_10173713 3300021384 Bacteria 1146
42 Ga0213875_10001449 3300021388 Bacteria 15374
43 Ga0213875_10003097 3300021388 Bacteria 9602
44 Ga0213875_10009998 3300021388 Bacteria 4773
45 Ga0213875_10059830 3300021388 Bacteria 1783
46 Ga0213875_10094758 3300021388 Bacteria 1392
47 Ga0213875_10144876 3300021388 Bacteria 1112
48 Ga0213875_10207728 3300021388 Bacteria 922
49 Ga0213875_10254536 3300021388 Bacteria 828
50 Ga0213871_10006266 3300021441 Bacteria 2508
51 Ga0213871_10160357 3300021441 Bacteria 688
52 Ga0209566_100076 3300025225 Bacteria 161921
53 Ga0209025_1010266 3300025294 Bacteria 6370
54 Ga0209025_1113796 3300025294 Bacteria 824
55 Ga0207688_10393554 3300025901 Bacteria 859
56 Ga0207699_10147785 3300025906 Bacteria 1552
57 Ga0207699_10415127 3300025906 Bacteria 960
58 Ga0207705_10147223 3300025909 Bacteria 1763
59 Ga0207707_10640596 3300025912 Bacteria 896
60 Ga0207695_10216504 3300025913 Bacteria 1824
61 Ga0207695_10527457 3300025913 Bacteria 1062
62 Ga0207671_10629065 3300025914 Bacteria 855
63 Ga0207693_10285393 3300025915 Bacteria 1293
64 Ga0207663_10152587 3300025916 Bacteria 1622
65 Ga0207663_10163140 3300025916 Bacteria 1576
66 Ga0207660_10270850 3300025917 Bacteria 1345
67 Ga0207657_10044690 3300025919 Bacteria 3892
68 Ga0207652_10065768 3300025921 Bacteria 3141
69 Ga0207687_10512556 3300025927 Bacteria 1002
70 Ga0207700_10234083 3300025928 Bacteria 1563
71 Ga0207664_10237213 3300025929 Bacteria 1587
72 Ga0207664_10374849 3300025929 Bacteria 1262
73 Ga0207664_10650265 3300025929 Bacteria 947
74 Ga0207679_11042523 3300025945 Bacteria 750
75 Ga0207667_10540181 3300025949 Bacteria 1179
76 Ga0207702_10166427 3300026078 Bacteria 2018
77 Ga0207702_10209356 3300026078 Bacteria 1812
78 Ga0207702_10954640 3300026078 Bacteria 850
79 Ga0265330_10024070 3300031235 Bacteria 2762
80 Ga0265328_10000024 3300031239 Bacteria 123047
81 Ga0265328_10004456 3300031239 Bacteria 6084
82 Ga0265329_10007722 3300031242 Bacteria 4134
83 Ga0265340_10186389 3300031247 Bacteria 937
84 Ga0265340_10261349 3300031247 Bacteria 771
85 Ga0265331_10000620 3300031250 Bacteria 30916
86 Ga0265331_10005654 3300031250 Bacteria 7513
87 Ga0265331_10130277 3300031250 Bacteria 1148
88 Ga0265327_10035857 3300031251 Bacteria 2736
89 Ga0265327_10120838 3300031251 Bacteria 1241
90 Ga0265316_10000169 3300031344 Bacteria 73902
91 Ga0265342_10028154 3300031712 Bacteria 3504
92 Ga0307411_10181956 3300032005 Bacteria 1596
93 Ga0307510_10218499 3300033180 Bacteria 1420
94 Ga0373926_0028575 3300035083 Bacteria 1958
95 Ga0373936_0179756 3300035113 Bacteria 928
96 Ga0373957_0033061 3300035120 Bacteria 1909
97 Ga0373943_0179157 3300035170 Bacteria 1164
98 Ga0373943_0195701 3300035170 Bacteria 1117
99 Ga0373946_0126306 3300035171 Bacteria 1172
100 Ga0373946_0222200 3300035171 Bacteria 912
101 Ga0373955_0027879 3300035172 Bacteria 2924
102 Ga0373931_0079158 3300035691 Bacteria 1810
103 Ga0373935_0098242 3300035692 Bacteria 1927
104 Ga0373935_0431870 3300035692 Bacteria 949
105 Ga0373933_0006788 3300035724 Bacteria 6237
106 Ga0373933_0181768 3300035724 Bacteria 1341
107 Ga0373947_0438107 3300035725 Bacteria 884
108 Ga0373937_0036428 3300036401 Bacteria 4483
109 Ga0373937_0063800 3300036401 Bacteria 3388
110 Ga0373937_0119601 3300036401 Bacteria 2454
111 Ga0373937_0159856 3300036401 Bacteria 2112
112 Ga0373925_0036278 3300037068 Bacteria 3639
113 Ga0373925_0049115 3300037068 Bacteria 3145
114 Ga0373925_0094811 3300037068 Bacteria 2285
115 Ga0395899_0182885 3300037312 Bacteria 1470
116 Ga0395900_0417334 3300037418 Bacteria 1303
117 Ga0436364_0000778 3300037853 Bacteria 1768
118 Ga0436364_0214212 3300037853 Bacteria 1603
119 Ga0436364_0222203 3300037853 Bacteria 2636
120 Ga0436364_0277707 3300037853 Bacteria 1865
121 Ga0436364_0338724 3300037853 Bacteria 3038
122 Ga0436364_0398899 3300037853 Bacteria 3087
123 Ga0436364_0502721 3300037853 Bacteria 2631
124 Ga0436364_0573467 3300037853 Bacteria 3491
125 Ga0436364_1030011 3300037853 Bacteria 1683
126 Ga0436364_1054992 3300037853 Bacteria 1069
127 Ga0436364_1094479 3300037853 Bacteria 825
128 Ga0436364_1213020 3300037853 Bacteria 23378
129 Ga0436364_1236183 3300037853 Bacteria 2174
130 Ga0436364_1346386 3300037853 Bacteria 1421
131 Ga0436364_1395528 3300037853 Bacteria 51230
132 Ga0395901_0012138 3300038443 Bacteria 8741
133 Ga0436365_0882732 3300039437 Bacteria 819
134 Ga0436365_1035435 3300039437 Bacteria 800
135 Ga0436365_1081079 3300039437 Bacteria 712
136 Ga0436365_1323660 3300039437 Bacteria 665
137 Ga0436365_1523898 3300039437 Bacteria 965
138 Ga0436365_1682585 3300039437 Bacteria 852
139 Ga0436365_1845969 3300039437 Bacteria 610
140 Ga0436360_0149096 3300039438 Bacteria 3105
141 Ga0436360_0611922 3300039438 Bacteria 837
142 Ga0436360_0910604 3300039438 Bacteria 1263
143 Ga0436360_0966486 3300039438 Bacteria 3221
144 Ga0436361_0157873 3300039447 Bacteria 1828
145 Ga0436361_0740999 3300039447 Bacteria 3466
146 Ga0436361_1167586 3300039447 Bacteria 650
147 Ga0436363_0175728 3300039450 Bacteria 2633
148 Ga0436363_0180410 3300039450 Bacteria 748
149 Ga0436363_0467587 3300039450 Bacteria 1961
150 Ga0436363_0606568 3300039450 Bacteria 641
151 Ga0436363_0708856 3300039450 Bacteria 1809
152 Ga0436363_0859315 3300039450 Bacteria 1408
153 Ga0436363_0868816 3300039450 Bacteria 1512
154 Ga0436363_0944277 3300039450 Bacteria 949
155 Ga0436363_1093905 3300039450 Bacteria 514
156 Ga0436363_1164410 3300039450 Bacteria 1936
157 Ga0436363_1358706 3300039450 Bacteria 967
158 Ga0436363_1689468 3300039450 Bacteria 1257
159 Ga0436362_0214202 3300039453 Bacteria 2350
160 Ga0436362_0929626 3300039453 Bacteria 910
161 Ga0436362_1044422 3300039453 Bacteria 1095
162 Ga0451833_0050658 3300041491 Bacteria 703
163 Ga0466969_0049274 3300044656 Bacteria 2079
164 Ga0466961_0362576 3300044693 Bacteria 881
165 Ga0466959_0015289 3300045049 Bacteria 5588
166 Ga0466959_0173229 3300045049 Bacteria 1513
167 Ga0451576_0002621 3300045051 Bacteria 26318
168 Ga0466958_0113024 3300045836 Bacteria 1696
169 Ga0466967_0972973 3300045976 Bacteria 845
170 Ga0495629_0153593 3300046459 Bacteria 1600
171 Ga0495651_0001978 3300046462 Bacteria 15875
172 Ga0495653_0245783 3300046463 Bacteria 1190
173 Ga0495582_0379302 3300046473 Bacteria 815
174 Ga0495662_0043714 3300046476 Bacteria 2163
175 Ga0495664_0005202 3300046477 Bacteria 7137
176 Ga0495594_0194638 3300046499 Bacteria 1155
177 Ga0495608_0044480 3300046511 Bacteria 2963
178 Ga0495608_0095556 3300046511 Bacteria 1920
179 Ga0495628_0042782 3300046516 Bacteria 3611
180 Ga0495628_0825458 3300046516 Bacteria 647
181 Ga0495652_0525165 3300046529 Bacteria 817
182 Ga0495640_0089514 3300046533 Bacteria 2033
183 Ga0495640_0097788 3300046533 Bacteria 1930
184 Ga0495587_0158955 3300046536 Bacteria 1286
185 Ga0495645_0004548 3300046543 Bacteria 9464
186 Ga0495633_0105411 3300046558 Bacteria 1308
187 Ga0495667_0051775 3300046559 Bacteria 2707
188 Ga0495667_0813016 3300046559 Bacteria 576
189 Ga0495635_0046787 3300046663 Bacteria 2984
190 Ga0495657_0095904 3300046675 Bacteria 1895
191 Ga0495623_0092442 3300046679 Bacteria 1854
192 Ga0495646_0043038 3300046680 Bacteria 2768
193 Ga0495604_0105940 3300047317 Bacteria 2057
194 Ga0495674_0038720 3300047319 Bacteria 4278
195 Ga0495674_0432604 3300047319 Bacteria 1059
196 Ga0495675_0167338 3300047444 Bacteria 1351
197 Ga0495684_0022980 3300047471 Bacteria 4797
198 Ga0495684_0813572 3300047471 Bacteria 609
199 Ga0495602_0001131 3300048088 Bacteria 26114
200 Ga0495602_0035757 3300048088 Bacteria 4629
201 Ga0496100_0278826 3300048903 Bacteria 1245
202 Ga0496101_0055159 3300048904 Bacteria 2870
203 Ga0496101_0068387 3300048904 Bacteria 2597
204 Ga0496104_0002354 3300048907 Bacteria 16331
205 Ga0496104_0072195 3300048907 Bacteria 3282
206 Ga0496105_0001935 3300048908 Bacteria 14881
207 Ga0496105_0425081 3300048908 Bacteria 1051
208 Ga0496106_0339422 3300048909 Bacteria 1206
209 Ga0496107_0026179 3300048910 Bacteria 4134
210 Ga0496107_0115715 3300048910 Bacteria 1974
211 Ga0496108_0001421 3300048911 Bacteria 18876
212 Ga0496108_0218889 3300048911 Bacteria 1654
213 Ga0496108_0231793 3300048911 Bacteria 1606
214 Ga0496109_0004353 3300048912 Bacteria 11838
215 Ga0496110_0003700 3300048913 Bacteria 11776
216 Ga0496110_0080284 3300048913 Bacteria 2906
217 Ga0496111_0001071 3300048914 Bacteria 15078
218 Ga0496111_0233122 3300048914 Bacteria 1367
219 Ga0496112_0003697 3300048915 Bacteria 12758
220 Ga0496112_0050553 3300048915 Bacteria 4077
221 Ga0496112_0111025 3300048915 Bacteria 2712
222 Ga0496113_0249255 3300048916 Bacteria 1417
223 Ga0496114_0505487 3300048917 Bacteria 1069
224 Ga0496115_0005535 3300048918 Bacteria 9191
225 Ga0496115_0070615 3300048918 Bacteria 2831
226 Ga0496119_0021231 3300048922 Bacteria 4701
227 Ga0496126_0127373 3300048929 Bacteria 2203
228 Ga0501031_0039490 3300049568 Bacteria 3080
229 Ga0501033_0078069 3300049570 Bacteria 2430
230 Ga0501036_0598285 3300049572 Bacteria 915
231 Ga0501037_0014962 3300049573 Bacteria 5707
232 Ga0501038_0501870 3300049574 Bacteria 928
233 Ga0501039_0114083 3300049575 Bacteria 2114
234 Ga0501039_0581790 3300049575 Bacteria 878
235 Ga0501040_0059527 3300049576 Bacteria 2624
236 Ga0501042_0028711 3300049578 Bacteria 3923
237 Ga0501070_0156510 3300049586 Bacteria 1879
238 Ga0501072_0351037 3300049588 Bacteria 1171
239 Ga0501074_0609647 3300049590 Bacteria 772
240 Ga0501077_0172710 3300049593 Bacteria 1373
241 Ga0501035_0159669 3300049822 Bacteria 1952
242 Ga0501044_0660836 3300049823 Bacteria 933
243 Ga0501045_0026458 3300049824 Bacteria 4173
244 nmdc:mga0sz30_339467_c1 3300050516 Bacteria 671
245 Ga0495612_0002103 3300053078 Bacteria 8187
246 Ga0495595_0007169 3300053084 Bacteria 4556
247 Ga0495619_0196511 3300053085 Bacteria 1396
248 Ga0587077_057134 3300059493 Bacteria 834
249 Ga0587083_0048177 3300059505 Bacteria 919
250 2545672782 2545555834 Bacteria 8130841
251 2738743828 2738541281 Bacteria 5112672
252 2739353058 2738543032 Bacteria 5115625
253 2837679238 2837678835 Bacteria 5252418
254 2883579099 2883577096 Bacteria 4709178
255 2891092922 2891088606 Bacteria 4762464
256 2909400658 2909399089 Bacteria 3922598
257 2928128989 2928125067 Bacteria 5937560
258 2937843725 2937843397 Bacteria 5256375
259 641337243 641228493 Bacteria 3999591
260 641640583 641522639 Bacteria 7737025
261 643392590 643348555 Bacteria 3914947
262 643603096 643348564 Bacteria 8839022
263 8055912229 8055909800 Bacteria 7278581
264 Ga0105240_10822411
265 JGI25151J46595_10010550
266 Ga0055535_1001510
267 Ga0055541_1000159
268 Ga0070658_10066490
269 Ga0070680_100319924
270 Ga0070660_100072137
271 Ga0070675_100727138
272 Ga0070673_100509082
273 Ga0070659_100167434
274 Ga0070709_10170432
275 Ga0070714_100096875
276 Ga0070714_100572562
277 Ga0070679_100116870
278 Ga0070693_100171215
279 Ga0070665_100112222
280 Ga0070665_100162672
281 Ga0070665_100718894
282 Ga0068856_100225874
283 Ga0068856_100740767
284 Ga0068856_101027995
285 Ga0068861_100399746
286 Ga0068862_101033980
287 Ga0070717_10184544
288 Ga0070717_10735440
289 Ga0105240_10441884
290 Ga0105245_10176677
291 Ga0105247_10523099
292 Ga0105248_10362506
293 Ga0105237_10909454
294 Ga0105246_11024733
295 Ga0157370_10182963
296 Ga0157369_10438135
297 Ga0157374_10301111
298 Ga0163162_10727484
299 Ga0163163_10003018
300 Ga0163163_10046997
301 Ga0182008_10053741
302 Ga0157379_10625502
303 Ga0157376_10370209
304 Ga0213876_10173713
305 Ga0213875_10001449
306 Ga0213875_10003097
307 Ga0213875_10009998
308 Ga0213875_10059830
309 Ga0213875_10094758
310 Ga0213875_10144876
311 Ga0213875_10207728
312 Ga0213875_10254536
313 Ga0213871_10006266
314 Ga0213871_10160357
315 Ga0209566_100076
316 Ga0209025_1010266
317 Ga0209025_1113796
318 Ga0207688_10393554
319 Ga0207699_10147785
320 Ga0207699_10415127
321 Ga0207705_10147223
322 Ga0207707_10640596
323 Ga0207695_10216504
324 Ga0207695_10527457
325 Ga0207671_10629065
326 Ga0207693_10285393
327 Ga0207663_10152587
328 Ga0207663_10163140
329 Ga0207660_10270850
330 Ga0207657_10044690
331 Ga0207652_10065768
332 Ga0207687_10512556
333 Ga0207700_10234083
334 Ga0207664_10237213
335 Ga0207664_10374849
336 Ga0207664_10650265
337 Ga0207679_11042523
338 Ga0207667_10540181
339 Ga0207702_10166427
340 Ga0207702_10209356
341 Ga0207702_10954640
342 Ga0265330_10024070
343 Ga0265328_10000024
344 Ga0265328_10004456
345 Ga0265329_10007722
346 Ga0265340_10186389
347 Ga0265340_10261349
348 Ga0265331_10000620
349 Ga0265331_10005654
350 Ga0265331_10130277
351 Ga0265327_10035857
352 Ga0265327_10120838
353 Ga0265316_10000169
354 Ga0265342_10028154
355 Ga0307411_10181956
356 Ga0307510_10218499
357 Ga0373926_0028575
358 Ga0373936_0179756
359 Ga0373957_0033061
360 Ga0373943_0179157
361 Ga0373943_0195701
362 Ga0373946_0126306
363 Ga0373946_0222200
364 Ga0373955_0027879
365 Ga0373931_0079158
366 Ga0373935_0098242
367 Ga0373935_0431870
368 Ga0373933_0006788
369 Ga0373933_0181768
370 Ga0373947_0438107
371 Ga0373937_0036428
372 Ga0373937_0063800
373 Ga0373937_0119601
374 Ga0373937_0159856
375 Ga0373925_0036278
376 Ga0373925_0049115
377 Ga0373925_0094811
378 Ga0395899_0182885
379 Ga0395900_0417334
380 Ga0436364_0000778
381 Ga0436364_0214212
382 Ga0436364_0222203
383 Ga0436364_0277707
384 Ga0436364_0338724
385 Ga0436364_0398899
386 Ga0436364_0502721
387 Ga0436364_0573467
388 Ga0436364_1030011
389 Ga0436364_1054992
390 Ga0436364_1094479
391 Ga0436364_1213020
392 Ga0436364_1236183
393 Ga0436364_1346386
394 Ga0436364_1395528
395 Ga0395901_0012138
396 Ga0436365_0882732
397 Ga0436365_1035435
398 Ga0436365_1081079
399 Ga0436365_1323660
400 Ga0436365_1523898
401 Ga0436365_1682585
402 Ga0436365_1845969
403 Ga0436360_0149096
404 Ga0436360_0611922
405 Ga0436360_0910604
406 Ga0436360_0966486
407 Ga0436361_0157873
408 Ga0436361_0740999
409 Ga0436361_1167586
410 Ga0436363_0175728
411 Ga0436363_0180410
412 Ga0436363_0467587
413 Ga0436363_0606568
414 Ga0436363_0708856
415 Ga0436363_0859315
416 Ga0436363_0868816
417 Ga0436363_0944277
418 Ga0436363_1093905
419 Ga0436363_1164410
420 Ga0436363_1358706
421 Ga0436363_1689468
422 Ga0436362_0214202
423 Ga0436362_0929626
424 Ga0436362_1044422
425 Ga0451833_0050658
426 Ga0466969_0049274
427 Ga0466961_0362576
428 Ga0466959_0015289
429 Ga0466959_0173229
430 Ga0451576_0002621
431 Ga0466958_0113024
432 Ga0466967_0972973
433 Ga0495629_0153593
434 Ga0495651_0001978
435 Ga0495653_0245783
436 Ga0495582_0379302
437 Ga0495662_0043714
438 Ga0495664_0005202
439 Ga0495594_0194638
440 Ga0495608_0044480
441 Ga0495608_0095556
442 Ga0495628_0042782
443 Ga0495628_0825458
444 Ga0495652_0525165
445 Ga0495640_0089514
446 Ga0495640_0097788
447 Ga0495587_0158955
448 Ga0495645_0004548
449 Ga0495633_0105411
450 Ga0495667_0051775
451 Ga0495667_0813016
452 Ga0495635_0046787
453 Ga0495657_0095904
454 Ga0495623_0092442
455 Ga0495646_0043038
456 Ga0495604_0105940
457 Ga0495674_0038720
458 Ga0495674_0432604
459 Ga0495675_0167338
460 Ga0495684_0022980
461 Ga0495684_0813572
462 Ga0495602_0001131
463 Ga0495602_0035757
464 Ga0496100_0278826
465 Ga0496101_0055159
466 Ga0496101_0068387
467 Ga0496104_0002354
468 Ga0496104_0072195
469 Ga0496105_0001935
470 Ga0496105_0425081
471 Ga0496106_0339422
472 Ga0496107_0026179
473 Ga0496107_0115715
474 Ga0496108_0001421
475 Ga0496108_0218889
476 Ga0496108_0231793
477 Ga0496109_0004353
478 Ga0496110_0003700
479 Ga0496110_0080284
480 Ga0496111_0001071
481 Ga0496111_0233122
482 Ga0496112_0003697
483 Ga0496112_0050553
484 Ga0496112_0111025
485 Ga0496113_0249255
486 Ga0496114_0505487
487 Ga0496115_0005535
488 Ga0496115_0070615
489 Ga0496119_0021231
490 Ga0496126_0127373
491 Ga0501031_0039490
492 Ga0501033_0078069
493 Ga0501036_0598285
494 Ga0501037_0014962
495 Ga0501038_0501870
496 Ga0501039_0114083
497 Ga0501039_0581790
498 Ga0501040_0059527
499 Ga0501042_0028711
500 Ga0501070_0156510
501 Ga0501072_0351037
502 Ga0501074_0609647
503 Ga0501077_0172710
504 Ga0501035_0159669
505 Ga0501044_0660836
506 Ga0501045_0026458
507 nmdc:mga0sz30_339467_c1
508 Ga0495612_0002103
509 Ga0495595_0007169
510 Ga0495619_0196511
511 Ga0587077_057134
512 Ga0587083_0048177
513 2545672782
514 2738743828
515 2739353058
516 2837679238
517 2883579099
518 2891092922
519 2909400658
520 2928128989
521 2937843725
522 641337243
523 641640583
524 643392590
525 643603096
526 8055912229

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00227

Proteasome

Proteasome subunit

38

212

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kr1-assembly2.cif.gz_B atp dependent protease hslv from staphylococcus aureus 0.9697 9 180
6kr1-assembly4.cif.gz_E atp dependent protease hslv from staphylococcus aureus 0.967 9 180
6kr1-assembly3.cif.gz_I atp dependent protease hslv from staphylococcus aureus 0.9634 9 180
6kr1-assembly2.cif.gz_B atp dependent protease hslv from staphylococcus aureus 0.9584 9 180
6kr1-assembly4.cif.gz_E atp dependent protease hslv from staphylococcus aureus 0.9557 9 180
ID Description Score Start End Superfamily
1nedC00 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9392 9 180 3.60.20.10
1nedC00 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8845 9 180 3.60.20.10
af_Q556Q0_41_257_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8138 6 179 3.60.20.10
af_A0A1D6NV82_62_282_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.812 9 177 3.60.20.10
af_P9WHT9_20_291_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8108 6 178 3.60.20.10
ID Description Score Start End GO Terms
AF-A0A380EIE8-F1-model_v4 ATP-dependent protease HslV (EC 3.4.25.-, EC 3.4.25.2) 0.9972 119 178 GO:0005839
GO:0008233
GO:0051603
AF-A0A7H4ULS3-F1-model_v4 deleted 0.9968 104 176
AF-S2RZP3-F1-model_v4 ATP-dependent protease subunit HslV (EC 3.4.25.1) 0.986 119 178 GO:0006508
GO:0008233
AF-A0A7X6IU10-F1-model_v4 deleted 0.9848 53 124
AF-A0A645FJN8-F1-model_v4 ATP-dependent protease subunit ClpQ (EC 3.4.21.-) 0.9829 81 178 GO:0004298
GO:0005839
GO:0009376
GO:0051603

Map