F371727

General Info

Members Datasets Scaffolds Average Seq Length
263 152 526 459

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100103534|Ga0068859_1001035342
Length 467
Sequence MEFLIYPAAFIFILGSAVVLHEFGHFIVAKLFRIRVETFSVGFGPRLFGRKWGHTDYRVSAIPLGGYVKLGGDESNAPLEGEGASDIPPEEMFNLRPRWQRICVALAGPIMNVLTALAIPFAGAMMYGVPATPAPVVYDVRTGGAADKAGLEVGDRIISFNGTEHPSWDFINGEALLSPGRPLPIVVDRKGTPLSLTITPSTRTENGDQAGFLDFVPDYGGLPVMVGDVFSGSPAEEAGLKTGDRLVKIGDQDVRSSAQVTEYIKSHGGQPMPILVQRGGQMVQLTAPERRLEGGRLGVGISEAVPLKAATIATGFKYAYETNLQILRLTGKALGQVFTGQRSVRNTLSGPIGIYQAAKTSVERLGWDGVFGMLGFLSLNLGIFNLLPIPVLDGGAIFMLLVEGLLGTVGLSISTAIRDRIQQVGFVMVLILMVFVIGNDVLKLIGIGGSKEPDRPPAAASSPVPGK

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
129 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
130 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
131 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
136 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
139 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
140 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
141 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
142 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
143 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
144 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
145 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.14
Rhizosphere 98.48
Stem 0
Stem Tuber 0
Unclassified 7.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100103534 3300005617 Bacteria 2904
2 JGI24748J21848_1000003 3300002074 Bacteria 323921
3 JGI24034J26672_10000005 3300002239 Bacteria 404185
4 JGI24751J29686_10000023 3300002459 Bacteria 97529
5 Ga0065714_10082985 3300005288 Unclassified 2252
6 Ga0065704_10001925 3300005289 Bacteria 7166
7 Ga0065704_10106690 3300005289 Bacteria 2076
8 Ga0065712_10015942 3300005290 Bacteria 2674
9 Ga0065712_10088304 3300005290 Bacteria 2526
10 Ga0065715_10094352 3300005293 Bacteria 4366
11 Ga0065715_10099168 3300005293 Bacteria 3448
12 Ga0065715_10107670 3300005293 Bacteria 2759
13 Ga0065707_10014915 3300005295 Bacteria 2341
14 Ga0070676_10047623 3300005328 Bacteria 2504
15 Ga0070676_10052991 3300005328 Unclassified 2388
16 Ga0070690_100012572 3300005330 Bacteria 4981
17 Ga0070690_100075076 3300005330 Bacteria 2203
18 Ga0070670_100000324 3300005331 Bacteria 40556
19 Ga0070670_100078794 3300005331 Bacteria 2831
20 Ga0070680_100009745 3300005336 Bacteria 7393
21 Ga0070680_100048546 3300005336 Bacteria 3460
22 Ga0070680_100165415 3300005336 Unclassified 1860
23 Ga0070682_100002049 3300005337 Bacteria 11249
24 Ga0068868_100042436 3300005338 Bacteria 3550
25 Ga0070660_100183007 3300005339 Bacteria 1696
26 Ga0070689_100000716 3300005340 Bacteria 20218
27 Ga0070687_100004638 3300005343 Bacteria 5493
28 Ga0070687_100014465 3300005343 Bacteria 3544
29 Ga0070661_100070497 3300005344 Unclassified 2571
30 Ga0070692_10002300 3300005345 Bacteria 7357
31 Ga0070692_10072564 3300005345 Bacteria 1837
32 Ga0070669_100003292 3300005353 Bacteria 11610
33 Ga0070675_100139366 3300005354 Bacteria 2072
34 Ga0070671_100068829 3300005355 Bacteria 2952
35 Ga0070673_100204135 3300005364 Bacteria 1703
36 Ga0070688_100018539 3300005365 Bacteria 4018
37 Ga0070659_100008120 3300005366 Bacteria 7656
38 Ga0070701_10053350 3300005438 Bacteria 2104
39 Ga0070694_100008520 3300005444 Bacteria 6274
40 Ga0070694_100050703 3300005444 Bacteria 2799
41 Ga0070708_100000158 3300005445 Bacteria 47837
42 Ga0070708_100094442 3300005445 Bacteria 2728
43 Ga0070681_10000354 3300005458 Bacteria 36996
44 Ga0070681_10004931 3300005458 Bacteria 12823
45 Ga0068867_100051103 3300005459 Bacteria 3048
46 Ga0070706_100036576 3300005467 Bacteria 4535
47 Ga0070706_100046693 3300005467 Unclassified 3997
48 Ga0070706_100097358 3300005467 Bacteria 2733
49 Ga0070698_100004618 3300005471 Bacteria 15130
50 Ga0070698_100027511 3300005471 Bacteria 5912
51 Ga0070699_100002826 3300005518 Bacteria 15494
52 Ga0070699_100004781 3300005518 Bacteria 11971
53 Ga0070679_100001229 3300005530 Bacteria 22504
54 Ga0070684_100230167 3300005535 Bacteria 1692
55 Ga0068853_100008922 3300005539 Bacteria 8073
56 Ga0068853_100047137 3300005539 Bacteria 3698
57 Ga0070672_100033282 3300005543 Bacteria 3901
58 Ga0070672_100114064 3300005543 Bacteria 2206
59 Ga0070686_100005287 3300005544 Bacteria 7137
60 Ga0070695_100028075 3300005545 Bacteria 3490
61 Ga0070695_100045102 3300005545 Bacteria 2809
62 Ga0070695_100113526 3300005545 Bacteria 1843
63 Ga0070696_100147935 3300005546 Unclassified 1722
64 Ga0070704_100012906 3300005549 Bacteria 5169
65 Ga0070704_100093803 3300005549 Unclassified 2244
66 Ga0068857_100119075 3300005577 Bacteria 2376
67 Ga0068857_100188752 3300005577 Bacteria 1877
68 Ga0070702_100005098 3300005615 Bacteria 6078
69 Ga0068852_100194622 3300005616 Bacteria 1915
70 Ga0068859_100021581 3300005617 Bacteria 6464
71 Ga0068864_100154691 3300005618 Bacteria 2080
72 Ga0068861_100011073 3300005719 Bacteria 6267
73 Ga0068863_100054965 3300005841 Bacteria 3771
74 Ga0068858_100003182 3300005842 Bacteria 16406
75 Ga0068858_100038659 3300005842 Bacteria 4427
76 Ga0068858_100044830 3300005842 Bacteria 4099
77 Ga0068858_100057465 3300005842 Unclassified 3595
78 Ga0068858_100190366 3300005842 Bacteria 1938
79 Ga0068860_100019452 3300005843 Bacteria 6585
80 Ga0068860_100040349 3300005843 Unclassified 4462
81 Ga0068860_100043092 3300005843 Bacteria 4307
82 Ga0068862_100012737 3300005844 Bacteria 6961
83 Ga0068862_100025551 3300005844 Bacteria 4958
84 Ga0081539_10003972 3300005985 Bacteria 17099
85 Ga0075432_10012882 3300006058 Bacteria 2843
86 Ga0097621_100001579 3300006237 Bacteria 15593
87 Ga0097621_100006306 3300006237 Bacteria 8412
88 Ga0068871_100004949 3300006358 Bacteria 9307
89 Ga0068871_100018400 3300006358 Bacteria 5309
90 Ga0075431_100145430 3300006847 Bacteria 2443
91 Ga0075433_10009725 3300006852 Bacteria 7702
92 Ga0075433_10021648 3300006852 Bacteria 5393
93 Ga0075433_10022596 3300006852 Bacteria 5281
94 Ga0075433_10037557 3300006852 Bacteria 4179
95 Ga0075434_100049360 3300006871 Bacteria 4178
96 Ga0075434_100130517 3300006871 Bacteria 2531
97 Ga0075434_100189024 3300006871 Bacteria 2079
98 Ga0075436_100026281 3300006914 Bacteria 4008
99 Ga0097620_100021581 3300006931 Bacteria 6464
100 Ga0097620_100103544 3300006931 Bacteria 2904
101 Ga0111539_10000296 3300009094 Bacteria 60206
102 Ga0111539_10011429 3300009094 Bacteria 11144
103 Ga0111539_10335287 3300009094 Unclassified 1760
104 Ga0105245_10043224 3300009098 Bacteria 4019
105 Ga0105245_10163904 3300009098 Bacteria 2111
106 Ga0105247_10000033 3300009101 Bacteria 184433
107 Ga0105247_10000635 3300009101 Bacteria 28087
108 Ga0114129_10007738 3300009147 Bacteria 15290
109 Ga0114129_10045998 3300009147 Bacteria 6134
110 Ga0114129_10086774 3300009147 Bacteria 4340
111 Ga0105243_10000386 3300009148 Bacteria 47128
112 Ga0105243_10014791 3300009148 Bacteria 5904
113 Ga0105243_10017131 3300009148 Bacteria 5480
114 Ga0105241_10030405 3300009174 Bacteria 4036
115 Ga0105242_10011687 3300009176 Bacteria 6755
116 Ga0105242_10128213 3300009176 Bacteria 2186
117 Ga0105242_10180332 3300009176 Bacteria 1863
118 Ga0105248_10030369 3300009177 Bacteria 6033
119 Ga0105248_10037194 3300009177 Bacteria 5445
120 Ga0105248_10040492 3300009177 Bacteria 5223
121 Ga0105248_10067582 3300009177 Bacteria 4013
122 Ga0105248_10090771 3300009177 Bacteria 3440
123 Ga0105248_10126528 3300009177 Bacteria 2882
124 Ga0105248_10158036 3300009177 Bacteria 2558
125 Ga0105248_10357040 3300009177 Unclassified 1645
126 Ga0105237_10010254 3300009545 Bacteria 9980
127 Ga0105249_10009278 3300009553 Bacteria 8603
128 Ga0105249_10043561 3300009553 Bacteria 4081
129 Ga0105249_10071924 3300009553 Bacteria 3197
130 Ga0105239_10038057 3300010375 Bacteria 5271
131 Ga0105239_10205646 3300010375 Bacteria 2206
132 Ga0157378_10000011 3300013297 Bacteria 158889
133 Ga0157378_10003521 3300013297 Bacteria 13887
134 Ga0157378_10010653 3300013297 Bacteria 8035
135 Ga0157378_10025162 3300013297 Bacteria 5245
136 Ga0157378_10031423 3300013297 Bacteria 4690
137 Ga0157378_10048022 3300013297 Bacteria 3795
138 Ga0163162_10022436 3300013306 Bacteria 6218
139 Ga0163162_10024201 3300013306 Bacteria 5992
140 Ga0163162_10065296 3300013306 Bacteria 3686
141 Ga0163162_10308612 3300013306 Bacteria 1714
142 Ga0157375_10002990 3300013308 Bacteria 14682
143 Ga0157375_10059991 3300013308 Bacteria 3771
144 Ga0157375_10101175 3300013308 Unclassified 2964
145 Ga0157375_10125678 3300013308 Bacteria 2679
146 Ga0163163_10006156 3300014325 Bacteria 10458
147 Ga0163163_10068291 3300014325 Bacteria 3537
148 Ga0163163_10087136 3300014325 Bacteria 3132
149 Ga0157380_10004993 3300014326 Bacteria 9244
150 Ga0157380_10008278 3300014326 Bacteria 7411
151 Ga0157380_10192679 3300014326 Bacteria 1801
152 Ga0157377_10006110 3300014745 Bacteria 5715
153 Ga0157379_10081163 3300014968 Bacteria 2905
154 Ga0157376_10066684 3300014969 Bacteria 3043
155 Ga0163161_10014722 3300017792 Bacteria 5447
156 Ga0207672_1000008 3300025223 Bacteria 26222
157 Ga0207710_10000001 3300025900 Bacteria 1797433
158 Ga0207710_10001583 3300025900 Bacteria 11152
159 Ga0207645_10049453 3300025907 Unclassified 2684
160 Ga0207645_10062175 3300025907 Bacteria 2385
161 Ga0207643_10006723 3300025908 Bacteria 6167
162 Ga0207643_10088269 3300025908 Bacteria 1805
163 Ga0207707_10000044 3300025912 Bacteria 122847
164 Ga0207671_10035599 3300025914 Bacteria 3693
165 Ga0207660_10010541 3300025917 Bacteria 6002
166 Ga0207660_10142492 3300025917 Unclassified 1833
167 Ga0207662_10008831 3300025918 Bacteria 5528
168 Ga0207662_10035901 3300025918 Bacteria 2896
169 Ga0207662_10128656 3300025918 Bacteria 1594
170 Ga0207652_10000462 3300025921 Bacteria 41666
171 Ga0207681_10010326 3300025923 Bacteria 5712
172 Ga0207650_10000112 3300025925 Bacteria 106714
173 Ga0207644_10007523 3300025931 Bacteria 7101
174 Ga0207690_10051967 3300025932 Bacteria 2743
175 Ga0207706_10010103 3300025933 Bacteria 8644
176 Ga0207686_10016080 3300025934 Bacteria 4194
177 Ga0207686_10022841 3300025934 Bacteria 3605
178 Ga0207686_10043431 3300025934 Bacteria 2754
179 Ga0207709_10001281 3300025935 Bacteria 17959
180 Ga0207709_10009567 3300025935 Bacteria 5334
181 Ga0207670_10001731 3300025936 Bacteria 11393
182 Ga0207704_10055499 3300025938 Bacteria 2421
183 Ga0207665_10039116 3300025939 Bacteria 3161
184 Ga0207689_10016590 3300025942 Bacteria 6232
185 Ga0207689_10110448 3300025942 Bacteria 2260
186 Ga0207689_10143439 3300025942 Bacteria 1968
187 Ga0207689_10199851 3300025942 Bacteria 1650
188 Ga0207679_10064046 3300025945 Bacteria 2746
189 Ga0207679_10064884 3300025945 Bacteria 2731
190 Ga0207651_10057056 3300025960 Bacteria 2691
191 Ga0207712_10036405 3300025961 Bacteria 3352
192 Ga0207712_10065913 3300025961 Bacteria 2587
193 Ga0207712_10072255 3300025961 Bacteria 2484
194 Ga0207640_10158318 3300025981 Bacteria 1672
195 Ga0207658_10043765 3300025986 Bacteria 3257
196 Ga0207677_10062668 3300026023 Bacteria 2581
197 Ga0207703_10000700 3300026035 Bacteria 33180
198 Ga0207703_10046794 3300026035 Bacteria 3486
199 Ga0207703_10119061 3300026035 Bacteria 2264
200 Ga0207703_10190799 3300026035 Bacteria 1814
201 Ga0207708_10013187 3300026075 Bacteria 6170
202 Ga0207708_10029384 3300026075 Bacteria 4167
203 Ga0207641_10068722 3300026088 Bacteria 3038
204 Ga0207641_10160688 3300026088 Bacteria 2042
205 Ga0207648_10005481 3300026089 Bacteria 12788
206 Ga0207648_10160958 3300026089 Bacteria 1982
207 Ga0207676_10002522 3300026095 Bacteria 13053
208 Ga0207676_10002972 3300026095 Bacteria 12095
209 Ga0207676_10010433 3300026095 Bacteria 6615
210 Ga0207674_10074118 3300026116 Bacteria 3417
211 Ga0207675_100024700 3300026118 Bacteria 5588
212 Ga0207428_10002868 3300027907 Bacteria 17091
213 Ga0207428_10198845 3300027907 Unclassified 1509
214 Ga0268265_10003451 3300028380 Bacteria 11366
215 Ga0268265_10026538 3300028380 Unclassified 4123
216 Ga0268264_10111457 3300028381 Bacteria 2397
217 Ga0268264_10125208 3300028381 Bacteria 2270
218 Ga0268264_10138936 3300028381 Bacteria 2164
219 Ga0307408_100006236 3300031548 Bacteria 7916
220 Ga0307405_10055795 3300031731 Bacteria 2474
221 Ga0307410_10064142 3300031852 Bacteria 2523
222 Ga0307410_10088641 3300031852 Bacteria 2191
223 Ga0307406_10003612 3300031901 Bacteria 8426
224 Ga0307412_10017259 3300031911 Bacteria 4318
225 Ga0307412_10019502 3300031911 Bacteria 4109
226 Ga0307409_100039532 3300031995 Bacteria 3502
227 Ga0307409_100074519 3300031995 Bacteria 2713
228 Ga0307416_100068347 3300032002 Bacteria 2935
229 Ga0307414_10002715 3300032004 Bacteria 9314
230 Ga0307414_10071630 3300032004 Bacteria 2501
231 Ga0307414_10149761 3300032004 Bacteria 1839
232 Ga0307411_10156644 3300032005 Bacteria 1700
233 Ga0373941_0009126 3300035115 Bacteria 2489
234 Ga0436365_1755736 3300039437 Bacteria 4075
235 Ga0439448_0004829 3300042005 Bacteria 3820
236 Ga0439458_0002958 3300042157 Bacteria 4077
237 Ga0453683_0008014 3300044673 Bacteria 7119
238 Ga0495632_0009924 3300046519 Bacteria 5689
239 Ga0496104_0103957 3300048907 Bacteria 2721
240 Ga0496109_0097388 3300048912 Bacteria 2727
241 Ga0496112_0085179 3300048915 Bacteria 3127
242 Ga0501298_002637 3300049521 Bacteria 2730
243 Ga0501299_000379 3300049522 Bacteria 5262
244 Ga0501076_0113019 3300049592 Bacteria 2197
245 Ga0501198_000729 3300049649 Bacteria 4101
246 Ga0501216_005394 3300049660 Bacteria 1927
247 Ga0501223_012617 3300049663 Unclassified 1688
248 Ga0501227_002858 3300049665 Bacteria 3789
249 Ga0501235_003740 3300049669 Bacteria 3284
250 Ga0501259_008254 3300049688 Unclassified 1674
251 Ga0501283_000713 3300049779 Bacteria 4369
252 Ga0501204_002605 3300049850 Bacteria 1844
253 nmdc:mga05p37_27910_c1 3300050507 Bacteria 6876
254 nmdc:mga05p37_29348_c1 3300050507 Bacteria 6712
255 nmdc:mga08y16_22423_c1 3300050511 Bacteria 6665
256 nmdc:mga0n895_106034_c1 3300050512 Bacteria 2823
257 nmdc:mga0n895_26496_c1 3300050512 Bacteria 5492
258 nmdc:mga0rr50_63507_c1 3300050513 Unclassified 2789
259 nmdc:mga08x19_20672_c1 3300050514 Bacteria 4055
260 nmdc:mga0a205_116765_c1 3300050515 Bacteria 2567
261 nmdc:mga0a205_15000_c1 3300050515 Bacteria 7232
262 nmdc:mga0a205_27267_c1 3300050515 Bacteria 5455
263 Ga0530510_0127664 3300061734 Bacteria 1870
264 Ga0068859_100103534
265 JGI24748J21848_1000003
266 JGI24034J26672_10000005
267 JGI24751J29686_10000023
268 Ga0065714_10082985
269 Ga0065704_10001925
270 Ga0065704_10106690
271 Ga0065712_10015942
272 Ga0065712_10088304
273 Ga0065715_10094352
274 Ga0065715_10099168
275 Ga0065715_10107670
276 Ga0065707_10014915
277 Ga0070676_10047623
278 Ga0070676_10052991
279 Ga0070690_100012572
280 Ga0070690_100075076
281 Ga0070670_100000324
282 Ga0070670_100078794
283 Ga0070680_100009745
284 Ga0070680_100048546
285 Ga0070680_100165415
286 Ga0070682_100002049
287 Ga0068868_100042436
288 Ga0070660_100183007
289 Ga0070689_100000716
290 Ga0070687_100004638
291 Ga0070687_100014465
292 Ga0070661_100070497
293 Ga0070692_10002300
294 Ga0070692_10072564
295 Ga0070669_100003292
296 Ga0070675_100139366
297 Ga0070671_100068829
298 Ga0070673_100204135
299 Ga0070688_100018539
300 Ga0070659_100008120
301 Ga0070701_10053350
302 Ga0070694_100008520
303 Ga0070694_100050703
304 Ga0070708_100000158
305 Ga0070708_100094442
306 Ga0070681_10000354
307 Ga0070681_10004931
308 Ga0068867_100051103
309 Ga0070706_100036576
310 Ga0070706_100046693
311 Ga0070706_100097358
312 Ga0070698_100004618
313 Ga0070698_100027511
314 Ga0070699_100002826
315 Ga0070699_100004781
316 Ga0070679_100001229
317 Ga0070684_100230167
318 Ga0068853_100008922
319 Ga0068853_100047137
320 Ga0070672_100033282
321 Ga0070672_100114064
322 Ga0070686_100005287
323 Ga0070695_100028075
324 Ga0070695_100045102
325 Ga0070695_100113526
326 Ga0070696_100147935
327 Ga0070704_100012906
328 Ga0070704_100093803
329 Ga0068857_100119075
330 Ga0068857_100188752
331 Ga0070702_100005098
332 Ga0068852_100194622
333 Ga0068859_100021581
334 Ga0068864_100154691
335 Ga0068861_100011073
336 Ga0068863_100054965
337 Ga0068858_100003182
338 Ga0068858_100038659
339 Ga0068858_100044830
340 Ga0068858_100057465
341 Ga0068858_100190366
342 Ga0068860_100019452
343 Ga0068860_100040349
344 Ga0068860_100043092
345 Ga0068862_100012737
346 Ga0068862_100025551
347 Ga0081539_10003972
348 Ga0075432_10012882
349 Ga0097621_100001579
350 Ga0097621_100006306
351 Ga0068871_100004949
352 Ga0068871_100018400
353 Ga0075431_100145430
354 Ga0075433_10009725
355 Ga0075433_10021648
356 Ga0075433_10022596
357 Ga0075433_10037557
358 Ga0075434_100049360
359 Ga0075434_100130517
360 Ga0075434_100189024
361 Ga0075436_100026281
362 Ga0097620_100021581
363 Ga0097620_100103544
364 Ga0111539_10000296
365 Ga0111539_10011429
366 Ga0111539_10335287
367 Ga0105245_10043224
368 Ga0105245_10163904
369 Ga0105247_10000033
370 Ga0105247_10000635
371 Ga0114129_10007738
372 Ga0114129_10045998
373 Ga0114129_10086774
374 Ga0105243_10000386
375 Ga0105243_10014791
376 Ga0105243_10017131
377 Ga0105241_10030405
378 Ga0105242_10011687
379 Ga0105242_10128213
380 Ga0105242_10180332
381 Ga0105248_10030369
382 Ga0105248_10037194
383 Ga0105248_10040492
384 Ga0105248_10067582
385 Ga0105248_10090771
386 Ga0105248_10126528
387 Ga0105248_10158036
388 Ga0105248_10357040
389 Ga0105237_10010254
390 Ga0105249_10009278
391 Ga0105249_10043561
392 Ga0105249_10071924
393 Ga0105239_10038057
394 Ga0105239_10205646
395 Ga0157378_10000011
396 Ga0157378_10003521
397 Ga0157378_10010653
398 Ga0157378_10025162
399 Ga0157378_10031423
400 Ga0157378_10048022
401 Ga0163162_10022436
402 Ga0163162_10024201
403 Ga0163162_10065296
404 Ga0163162_10308612
405 Ga0157375_10002990
406 Ga0157375_10059991
407 Ga0157375_10101175
408 Ga0157375_10125678
409 Ga0163163_10006156
410 Ga0163163_10068291
411 Ga0163163_10087136
412 Ga0157380_10004993
413 Ga0157380_10008278
414 Ga0157380_10192679
415 Ga0157377_10006110
416 Ga0157379_10081163
417 Ga0157376_10066684
418 Ga0163161_10014722
419 Ga0207672_1000008
420 Ga0207710_10000001
421 Ga0207710_10001583
422 Ga0207645_10049453
423 Ga0207645_10062175
424 Ga0207643_10006723
425 Ga0207643_10088269
426 Ga0207707_10000044
427 Ga0207671_10035599
428 Ga0207660_10010541
429 Ga0207660_10142492
430 Ga0207662_10008831
431 Ga0207662_10035901
432 Ga0207662_10128656
433 Ga0207652_10000462
434 Ga0207681_10010326
435 Ga0207650_10000112
436 Ga0207644_10007523
437 Ga0207690_10051967
438 Ga0207706_10010103
439 Ga0207686_10016080
440 Ga0207686_10022841
441 Ga0207686_10043431
442 Ga0207709_10001281
443 Ga0207709_10009567
444 Ga0207670_10001731
445 Ga0207704_10055499
446 Ga0207665_10039116
447 Ga0207689_10016590
448 Ga0207689_10110448
449 Ga0207689_10143439
450 Ga0207689_10199851
451 Ga0207679_10064046
452 Ga0207679_10064884
453 Ga0207651_10057056
454 Ga0207712_10036405
455 Ga0207712_10065913
456 Ga0207712_10072255
457 Ga0207640_10158318
458 Ga0207658_10043765
459 Ga0207677_10062668
460 Ga0207703_10000700
461 Ga0207703_10046794
462 Ga0207703_10119061
463 Ga0207703_10190799
464 Ga0207708_10013187
465 Ga0207708_10029384
466 Ga0207641_10068722
467 Ga0207641_10160688
468 Ga0207648_10005481
469 Ga0207648_10160958
470 Ga0207676_10002522
471 Ga0207676_10002972
472 Ga0207676_10010433
473 Ga0207674_10074118
474 Ga0207675_100024700
475 Ga0207428_10002868
476 Ga0207428_10198845
477 Ga0268265_10003451
478 Ga0268265_10026538
479 Ga0268264_10111457
480 Ga0268264_10125208
481 Ga0268264_10138936
482 Ga0307408_100006236
483 Ga0307405_10055795
484 Ga0307410_10064142
485 Ga0307410_10088641
486 Ga0307406_10003612
487 Ga0307412_10017259
488 Ga0307412_10019502
489 Ga0307409_100039532
490 Ga0307409_100074519
491 Ga0307416_100068347
492 Ga0307414_10002715
493 Ga0307414_10071630
494 Ga0307414_10149761
495 Ga0307411_10156644
496 Ga0373941_0009126
497 Ga0436365_1755736
498 Ga0439448_0004829
499 Ga0439458_0002958
500 Ga0453683_0008014
501 Ga0495632_0009924
502 Ga0496104_0103957
503 Ga0496109_0097388
504 Ga0496112_0085179
505 Ga0501298_002637
506 Ga0501299_000379
507 Ga0501076_0113019
508 Ga0501198_000729
509 Ga0501216_005394
510 Ga0501223_012617
511 Ga0501227_002858
512 Ga0501235_003740
513 Ga0501259_008254
514 Ga0501283_000713
515 Ga0501204_002605
516 nmdc:mga05p37_27910_c1
517 nmdc:mga05p37_29348_c1
518 nmdc:mga08y16_22423_c1
519 nmdc:mga0n895_106034_c1
520 nmdc:mga0n895_26496_c1
521 nmdc:mga0rr50_63507_c1
522 nmdc:mga08x19_20672_c1
523 nmdc:mga0a205_116765_c1
524 nmdc:mga0a205_15000_c1
525 nmdc:mga0a205_27267_c1
526 Ga0530510_0127664

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

9

432

0.97

PF17820

PDZ_6

PDZ domain

225

278

0.94

PF13180

PDZ_2

PDZ domain

126

199

0.93

PF13180

PDZ_2

PDZ domain

207

288

0.87

PF17820

PDZ_6

PDZ domain

136

189

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pzd-assembly1.cif.gz_B crystal structure of the htra2/omi pdz domain bound to a phage-derived ligand (wtmfwv) 0.9202 225 292
3id4-assembly1.cif.gz_A crystal structure of rsep pdz2 domain fused gkaspv peptide 0.9129 136 219
2zpm-assembly1.cif.gz_A crystal structure analysis of pdz domain b 0.8973 137 219
2ytw-assembly1.cif.gz_A solution structure of the pdz-domain of human protease htra 1 precursor 0.885 227 292
7w71-assembly2.cif.gz_A crystal structure of the pdz-c domain of e. coli rsep in complex with 12c7 fab 0.8787 136 219
ID Description Score Start End Superfamily
5fhtA03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9292 225 290 2.30.42.10
2p3wB01 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9282 227 292 2.30.42.10
3pv2B02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9235 227 291 2.30.42.10
af_Q9VFJ3_320_421_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9175 225 291 2.30.42.10
af_A9JRB3_372_475_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9146 227 297 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A352MV81-F1-model_v4 Peptidase M50 domain-containing protein 0.9228 6 113 GO:0004222
GO:0006508
GO:0016020
AF-A0A356TKY7-F1-model_v4 RIP metalloprotease RseP 0.9166 9 116 GO:0004222
GO:0006508
GO:0016020
AF-A0A7C5FIU8-F1-model_v4 RIP metalloprotease 0.9018 7 121 GO:0004222
GO:0006508
GO:0016020
AF-A0A4Y7RZ56-F1-model_v4 Putative zinc metalloprotease (EC 3.4.24.-) 0.8999 7 129 GO:0004222
GO:0006508
GO:0016020
AF-A0A2M6Y818-F1-model_v4 RIP metalloprotease RseP 0.8934 9 111 GO:0004222
GO:0006508
GO:0016020

Map