F371687

General Info

Members Datasets Scaffolds Average Seq Length
263 147 526 220

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100339877|Ga0070706_1003398772
Length 245
Sequence MVIRVAIADDQELVRAGLRMIIEGESDFVVVAEAANGEEAVAMTLRSHPDVLLMDVQMPGLDGIRATQRIVAAGATSATRVLMLTTFDLDEYVYEAMRAGASGFLLKDLPGEDLVIAIRQAARGGDVLLAPAVTRRLIERFANSRPAALRPQSTLQDLTPRELEVLKLIARGLSNLEIAEQLQVSETTVKTHVARVLMKLGLRDRVQAVVVAYETGLVMPAAREGQDRHAAHTGRAAGEQIDHAP

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
23 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
24 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
25 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
26 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
27 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
36 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
37 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
38 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
44 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
45 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
46 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
47 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
48 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
49 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
50 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
51 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
52 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
59 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
67 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
68 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
78 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
79 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
80 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
81 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
82 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
83 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
84 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
85 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
86 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
87 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
91 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
92 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 4.94
Rhizosphere 90.87
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100339877 3300005467 Bacteria 1400
2 Ga0070658_10076651 3300005327 Bacteria 2742
3 Ga0070683_100132258 3300005329 Bacteria 2361
4 Ga0070680_100028114 3300005336 Bacteria 4509
5 Ga0070660_100010933 3300005339 Bacteria 6426
6 Ga0070708_100343542 3300005445 Bacteria 1406
7 Ga0068867_100132796 3300005459 Bacteria 1937
8 Ga0070706_100007455 3300005467 Bacteria 10255
9 Ga0070707_100056847 3300005468 Bacteria 3753
10 Ga0070707_100173749 3300005468 Bacteria 2100
11 Ga0070679_100064042 3300005530 Bacteria 3664
12 Ga0070679_100672200 3300005530 Unclassified 978
13 Ga0070684_100457345 3300005535 Bacteria 1180
14 Ga0068859_100678976 3300005617 Bacteria 1121
15 Ga0068864_100526847 3300005618 Bacteria 1140
16 Ga0081538_10118700 3300005981 Bacteria 1277
17 Ga0070717_10003482 3300006028 Bacteria 11275
18 Ga0075363_100002117 3300006048 Bacteria 7965
19 Ga0075428_100002159 3300006844 Bacteria 21265
20 Ga0097620_100679095 3300006931 Bacteria 1121
21 Ga0114129_10002952 3300009147 Bacteria 23793
22 Ga0105237_10354338 3300009545 Bacteria 1472
23 Ga0105239_10839249 3300010375 Bacteria 1053
24 Ga0163162_10083943 3300013306 Bacteria 3260
25 Ga0157372_10085629 3300013307 Bacteria 3575
26 Ga0157372_10125984 3300013307 Bacteria 2945
27 Ga0157380_10616085 3300014326 Bacteria 1077
28 Ga0213874_10026813 3300021377 Bacteria 1634
29 Ga0213875_10003973 3300021388 Bacteria 8247
30 Ga0213875_10038444 3300021388 Bacteria 2255
31 Ga0224572_1005112 3300024225 Bacteria 2324
32 Ga0207705_10288691 3300025909 Bacteria 1257
33 Ga0207684_10000923 3300025910 Bacteria 33348
34 Ga0207684_10117459 3300025910 Bacteria 2279
35 Ga0207684_10169929 3300025910 Bacteria 1879
36 Ga0207660_10061542 3300025917 Bacteria 2702
37 Ga0207657_10023821 3300025919 Bacteria 5689
38 Ga0207652_10007593 3300025921 Bacteria 8731
39 Ga0207646_10042892 3300025922 Bacteria 4064
40 Ga0207646_10220963 3300025922 Bacteria 1711
41 Ga0207664_10586315 3300025929 Bacteria 1001
42 Ga0207676_10292984 3300026095 Bacteria 1483
43 Ga0307511_10002303 3300030521 Bacteria 19941
44 Ga0307408_100940964 3300031548 Bacteria 793
45 Ga0307405_10715303 3300031731 Bacteria 831
46 Ga0326468_10009050 3300031889 Bacteria 978
47 Ga0307406_10340929 3300031901 Bacteria 1167
48 Ga0307412_10292933 3300031911 Bacteria 1283
49 Ga0307416_100073325 3300032002 Bacteria 2854
50 Ga0307416_101218525 3300032002 Bacteria 858
51 Ga0307415_100732235 3300032126 Bacteria 896
52 Ga0373923_0088178 3300035111 Bacteria 1354
53 Ga0373946_0011557 3300035171 Bacteria 3296
54 Ga0373935_0292405 3300035692 Bacteria 1149
55 Ga0373925_0082349 3300037068 Bacteria 2448
56 Ga0436364_0161143 3300037853 Bacteria 26166
57 Ga0436364_1405388 3300037853 Bacteria 1166
58 Ga0436363_1295799 3300039450 Bacteria 11753
59 Ga0451795_0338316 3300041456 Bacteria 1346
60 Ga0451849_1351967 3300041505 Bacteria 932
61 Ga0451851_0357914 3300041507 Bacteria 1004
62 Ga0466969_0115649 3300044656 Bacteria 1252
63 Ga0466972_0008045 3300044658 Bacteria 5285
64 Ga0466965_0001411 3300044683 Bacteria 9682
65 Ga0466961_0007242 3300044693 Bacteria 7061
66 Ga0466963_0019652 3300044694 Bacteria 4241
67 Ga0466964_0180617 3300044706 Bacteria 1000
68 Ga0466971_0002094 3300044719 Bacteria 8468
69 Ga0466968_0007843 3300044735 Bacteria 4073
70 Ga0466968_0011939 3300044735 Bacteria 3391
71 Ga0466970_0063318 3300044765 Bacteria 1983
72 Ga0466957_0001867 3300044842 Bacteria 11140
73 Ga0466957_0005712 3300044842 Bacteria 6995
74 Ga0466957_0475109 3300044842 Bacteria 864
75 Ga0466960_0004878 3300044901 Bacteria 5275
76 Ga0466959_0002169 3300045049 Bacteria 12475
77 Ga0466959_0011570 3300045049 Bacteria 6341
78 Ga0466959_0027338 3300045049 Bacteria 4232
79 Ga0466958_0002794 3300045836 Bacteria 8881
80 Ga0466958_0143963 3300045836 Bacteria 1502
81 Ga0466958_0190333 3300045836 Bacteria 1304
82 Ga0466967_0016415 3300045976 Bacteria 5839
83 Ga0466967_0049823 3300045976 Bacteria 3665
84 Ga0466967_0134754 3300045976 Bacteria 2296
85 Ga0466967_0179471 3300045976 Bacteria 1996
86 Ga0466967_0185932 3300045976 Bacteria 1962
87 Ga0495627_051704 3300046453 Bacteria 1234
88 Ga0495603_0008388 3300046455 Bacteria 6243
89 Ga0495603_0020899 3300046455 Bacteria 3963
90 Ga0495603_0039937 3300046455 Bacteria 2810
91 Ga0495603_0183698 3300046455 Bacteria 1210
92 Ga0495591_051638 3300046458 Bacteria 1121
93 Ga0495580_0593025 3300046472 Bacteria 733
94 Ga0495582_0006256 3300046473 Bacteria 6635
95 Ga0495639_0055154 3300046475 Bacteria 1813
96 Ga0495662_0031432 3300046476 Bacteria 2565
97 Ga0495664_0052921 3300046477 Bacteria 2414
98 Ga0495584_0049475 3300046491 Bacteria 2118
99 Ga0495594_0042894 3300046499 Bacteria 2478
100 Ga0495607_0058832 3300046501 Bacteria 2195
101 Ga0495631_0085140 3300046518 Bacteria 1362
102 Ga0495631_0092470 3300046518 Bacteria 1302
103 Ga0495644_0006596 3300046523 Bacteria 4497
104 Ga0495644_0159245 3300046523 Bacteria 865
105 Ga0495663_0007871 3300046525 Bacteria 2945
106 Ga0495598_0000618 3300046537 Bacteria 6734
107 Ga0495598_0166141 3300046537 Bacteria 779
108 Ga0495609_0162381 3300046538 Bacteria 946
109 Ga0495621_0066794 3300046539 Bacteria 1316
110 Ga0495656_0014912 3300046615 Bacteria 2923
111 Ga0495656_0084941 3300046615 Bacteria 1436
112 Ga0495656_0101020 3300046615 Bacteria 1334
113 Ga0495656_0140668 3300046615 Bacteria 1157
114 Ga0495656_0242894 3300046615 Bacteria 907
115 Ga0495635_0073285 3300046663 Bacteria 2346
116 Ga0495659_0003623 3300046664 Bacteria 4914
117 Ga0495661_0151380 3300046665 Bacteria 1253
118 Ga0495588_0023720 3300046674 Bacteria 3040
119 Ga0495588_0139911 3300046674 Bacteria 1278
120 Ga0495624_0138300 3300046690 Bacteria 1492
121 Ga0495624_0480573 3300046690 Unclassified 744
122 Ga0495670_0009197 3300046691 Bacteria 4859
123 Ga0495670_0022967 3300046691 Bacteria 3079
124 Ga0495589_0064926 3300046794 Bacteria 1790
125 Ga0495581_0024233 3300047315 Bacteria 3517
126 Ga0495636_0148805 3300047318 Bacteria 1049
127 Ga0495674_0198231 3300047319 Bacteria 1666
128 Ga0495676_0085583 3300047321 Bacteria 2375
129 Ga0495676_0385003 3300047321 Bacteria 932
130 Ga0495593_0063044 3300047673 Bacteria 1936
131 Ga0496100_0081401 3300048903 Bacteria 2187
132 Ga0496103_0326597 3300048906 Bacteria 987
133 Ga0496104_0110148 3300048907 Bacteria 2639
134 Ga0496107_0045961 3300048910 Bacteria 3142
135 Ga0496108_0246405 3300048911 Bacteria 1554
136 Ga0496109_0066267 3300048912 Bacteria 3306
137 Ga0496109_0469802 3300048912 Bacteria 1188
138 Ga0496110_0044168 3300048913 Bacteria 3892
139 Ga0496113_0046028 3300048916 Bacteria 3238
140 Ga0496114_0047891 3300048917 Bacteria 3555
141 Ga0496115_0010660 3300048918 Bacteria 6874
142 Ga0496115_0641440 3300048918 Bacteria 840
143 Ga0501031_0007944 3300049568 Bacteria 6908
144 Ga0501031_0015032 3300049568 Bacteria 5027
145 Ga0501031_0075069 3300049568 Bacteria 2201
146 Ga0501032_0014916 3300049569 Bacteria 5498
147 Ga0501032_0092820 3300049569 Bacteria 2002
148 Ga0501033_0021277 3300049570 Bacteria 4893
149 Ga0501033_0081128 3300049570 Bacteria 2379
150 Ga0501033_0170903 3300049570 Bacteria 1561
151 Ga0501033_0228746 3300049570 Bacteria 1322
152 Ga0501036_0007942 3300049572 Bacteria 8683
153 Ga0501036_0021380 3300049572 Bacteria 5439
154 Ga0501036_0036967 3300049572 Bacteria 4131
155 Ga0501036_0082350 3300049572 Bacteria 2719
156 Ga0501037_0023946 3300049573 Bacteria 4514
157 Ga0501037_0120009 3300049573 Bacteria 1891
158 Ga0501037_0520346 3300049573 Bacteria 805
159 Ga0501038_0027258 3300049574 Bacteria 5085
160 Ga0501038_0038152 3300049574 Bacteria 4208
161 Ga0501038_0697364 3300049574 Bacteria 761
162 Ga0501039_0001109 3300049575 Bacteria 19797
163 Ga0501039_0006320 3300049575 Bacteria 8994
164 Ga0501039_0074315 3300049575 Bacteria 2641
165 Ga0501039_0142224 3300049575 Bacteria 1884
166 Ga0501040_0013265 3300049576 Bacteria 5418
167 Ga0501040_0026125 3300049576 Bacteria 3927
168 Ga0501040_0036345 3300049576 Bacteria 3342
169 Ga0501040_0351176 3300049576 Bacteria 1056
170 Ga0501041_0003453 3300049577 Bacteria 9095
171 Ga0501041_0013686 3300049577 Bacteria 4813
172 Ga0501041_0017383 3300049577 Bacteria 4280
173 Ga0501041_0042624 3300049577 Bacteria 2758
174 Ga0501042_0028353 3300049578 Bacteria 3944
175 Ga0501042_0031565 3300049578 Bacteria 3747
176 Ga0501042_0171459 3300049578 Bacteria 1565
177 Ga0501042_0269811 3300049578 Bacteria 1228
178 Ga0501043_0049191 3300049579 Bacteria 3314
179 Ga0501043_0124392 3300049579 Bacteria 2022
180 Ga0501043_0153893 3300049579 Bacteria 1799
181 Ga0501046_0014193 3300049580 Bacteria 6729
182 Ga0501046_0200340 3300049580 Bacteria 1485
183 Ga0501046_0239441 3300049580 Bacteria 1338
184 Ga0501047_0709289 3300049581 Bacteria 823
185 Ga0501048_0007638 3300049582 Bacteria 8196
186 Ga0501048_0008710 3300049582 Bacteria 7649
187 Ga0501048_0021346 3300049582 Bacteria 4740
188 Ga0501048_0027913 3300049582 Bacteria 4099
189 Ga0501068_0006404 3300049584 Bacteria 6489
190 Ga0501068_0168549 3300049584 Bacteria 1381
191 Ga0501068_0170246 3300049584 Bacteria 1374
192 Ga0501069_0018086 3300049585 Bacteria 3802
193 Ga0501070_0022646 3300049586 Bacteria 5261
194 Ga0501070_0044790 3300049586 Bacteria 3680
195 Ga0501070_0064287 3300049586 Bacteria 3039
196 Ga0501071_0003789 3300049587 Bacteria 9502
197 Ga0501071_0025824 3300049587 Bacteria 4117
198 Ga0501071_0033823 3300049587 Bacteria 3633
199 Ga0501071_0078455 3300049587 Bacteria 2413
200 Ga0501072_0003055 3300049588 Bacteria 12617
201 Ga0501072_0005088 3300049588 Bacteria 10009
202 Ga0501072_0045670 3300049588 Bacteria 3445
203 Ga0501072_0128526 3300049588 Bacteria 2019
204 Ga0501072_0167043 3300049588 Bacteria 1755
205 Ga0501073_0083460 3300049589 Bacteria 2223
206 Ga0501074_0012741 3300049590 Bacteria 6113
207 Ga0501074_0079962 3300049590 Bacteria 2346
208 Ga0501074_0120604 3300049590 Bacteria 1875
209 Ga0501074_0706582 3300049590 Bacteria 711
210 Ga0501075_0008578 3300049591 Bacteria 7124
211 Ga0501075_0028803 3300049591 Bacteria 4102
212 Ga0501075_0030246 3300049591 Bacteria 4010
213 Ga0501075_0043333 3300049591 Bacteria 3375
214 Ga0501076_0004242 3300049592 Bacteria 10146
215 Ga0501076_0031148 3300049592 Bacteria 4158
216 Ga0501076_0077294 3300049592 Bacteria 2670
217 Ga0501076_0115241 3300049592 Bacteria 2174
218 Ga0501077_0023231 3300049593 Bacteria 3931
219 Ga0501077_0029825 3300049593 Bacteria 3468
220 Ga0501077_0055459 3300049593 Bacteria 2516
221 Ga0501079_0007917 3300049741 Bacteria 8056
222 Ga0501079_0012015 3300049741 Bacteria 6609
223 Ga0501079_0035774 3300049741 Bacteria 3823
224 Ga0501079_0040378 3300049741 Bacteria 3598
225 Ga0501080_0005261 3300049742 Bacteria 11525
226 Ga0501080_0056059 3300049742 Bacteria 3670
227 Ga0501080_0192927 3300049742 Bacteria 1872
228 Ga0501081_0001036 3300049743 Bacteria 16624
229 Ga0501081_0002445 3300049743 Bacteria 11722
230 Ga0501081_0032771 3300049743 Bacteria 3526
231 Ga0501081_0073455 3300049743 Bacteria 2385
232 Ga0501083_0000027 3300049744 Bacteria 117605
233 Ga0501083_0005449 3300049744 Bacteria 9012
234 Ga0501083_0026319 3300049744 Bacteria 4021
235 Ga0501083_0420871 3300049744 Bacteria 869
236 Ga0501035_0060305 3300049822 Bacteria 3377
237 Ga0501035_0070891 3300049822 Bacteria 3086
238 Ga0501044_0037757 3300049823 Bacteria 5047
239 Ga0501045_0004061 3300049824 Bacteria 10097
240 Ga0501045_0005682 3300049824 Bacteria 8631
241 Ga0501045_0027470 3300049824 Bacteria 4101
242 Ga0501045_0080711 3300049824 Bacteria 2398
243 nmdc:mga05p37_534_c1 3300050507 Bacteria 41952
244 nmdc:mga0qj67_8_c2 3300050509 Bacteria 13650
245 nmdc:mga06r32_1008695_c1 3300050510 Bacteria 785
246 nmdc:mga06r32_1715_c1 3300050510 Bacteria 13186
247 Ga0495655_0003538 3300053083 Bacteria 2585
248 Ga0495619_0070638 3300053085 Bacteria 2335
249 Ga0500573_0018149 3300053140 Bacteria 4010
250 Ga0501084_0001744 3300054114 Bacteria 17275
251 Ga0501084_0048162 3300054114 Bacteria 3568
252 Ga0501084_0071380 3300054114 Bacteria 2907
253 Ga0501084_0093988 3300054114 Bacteria 2518
254 Ga0590075_010589 3300059424 Bacteria 2221
255 Ga0501082_0008051 3300060353 Bacteria 9093
256 Ga0501082_0008405 3300060353 Bacteria 8905
257 Ga0501082_0129930 3300060353 Bacteria 2185
258 Ga0501082_0268178 3300060353 Bacteria 1485
259 Ga0466962_0008173 3300061719 Bacteria 5018
260 Ga0466962_0099549 3300061719 Bacteria 1396
261 Ga0530510_0004966 3300061734 Bacteria 9188
262 Ga0530510_0008500 3300061734 Bacteria 7159
263 Ga0530510_0093504 3300061734 Bacteria 2195
264 Ga0070706_100339877
265 Ga0070658_10076651
266 Ga0070683_100132258
267 Ga0070680_100028114
268 Ga0070660_100010933
269 Ga0070708_100343542
270 Ga0068867_100132796
271 Ga0070706_100007455
272 Ga0070707_100056847
273 Ga0070707_100173749
274 Ga0070679_100064042
275 Ga0070679_100672200
276 Ga0070684_100457345
277 Ga0068859_100678976
278 Ga0068864_100526847
279 Ga0081538_10118700
280 Ga0070717_10003482
281 Ga0075363_100002117
282 Ga0075428_100002159
283 Ga0097620_100679095
284 Ga0114129_10002952
285 Ga0105237_10354338
286 Ga0105239_10839249
287 Ga0163162_10083943
288 Ga0157372_10085629
289 Ga0157372_10125984
290 Ga0157380_10616085
291 Ga0213874_10026813
292 Ga0213875_10003973
293 Ga0213875_10038444
294 Ga0224572_1005112
295 Ga0207705_10288691
296 Ga0207684_10000923
297 Ga0207684_10117459
298 Ga0207684_10169929
299 Ga0207660_10061542
300 Ga0207657_10023821
301 Ga0207652_10007593
302 Ga0207646_10042892
303 Ga0207646_10220963
304 Ga0207664_10586315
305 Ga0207676_10292984
306 Ga0307511_10002303
307 Ga0307408_100940964
308 Ga0307405_10715303
309 Ga0326468_10009050
310 Ga0307406_10340929
311 Ga0307412_10292933
312 Ga0307416_100073325
313 Ga0307416_101218525
314 Ga0307415_100732235
315 Ga0373923_0088178
316 Ga0373946_0011557
317 Ga0373935_0292405
318 Ga0373925_0082349
319 Ga0436364_0161143
320 Ga0436364_1405388
321 Ga0436363_1295799
322 Ga0451795_0338316
323 Ga0451849_1351967
324 Ga0451851_0357914
325 Ga0466969_0115649
326 Ga0466972_0008045
327 Ga0466965_0001411
328 Ga0466961_0007242
329 Ga0466963_0019652
330 Ga0466964_0180617
331 Ga0466971_0002094
332 Ga0466968_0007843
333 Ga0466968_0011939
334 Ga0466970_0063318
335 Ga0466957_0001867
336 Ga0466957_0005712
337 Ga0466957_0475109
338 Ga0466960_0004878
339 Ga0466959_0002169
340 Ga0466959_0011570
341 Ga0466959_0027338
342 Ga0466958_0002794
343 Ga0466958_0143963
344 Ga0466958_0190333
345 Ga0466967_0016415
346 Ga0466967_0049823
347 Ga0466967_0134754
348 Ga0466967_0179471
349 Ga0466967_0185932
350 Ga0495627_051704
351 Ga0495603_0008388
352 Ga0495603_0020899
353 Ga0495603_0039937
354 Ga0495603_0183698
355 Ga0495591_051638
356 Ga0495580_0593025
357 Ga0495582_0006256
358 Ga0495639_0055154
359 Ga0495662_0031432
360 Ga0495664_0052921
361 Ga0495584_0049475
362 Ga0495594_0042894
363 Ga0495607_0058832
364 Ga0495631_0085140
365 Ga0495631_0092470
366 Ga0495644_0006596
367 Ga0495644_0159245
368 Ga0495663_0007871
369 Ga0495598_0000618
370 Ga0495598_0166141
371 Ga0495609_0162381
372 Ga0495621_0066794
373 Ga0495656_0014912
374 Ga0495656_0084941
375 Ga0495656_0101020
376 Ga0495656_0140668
377 Ga0495656_0242894
378 Ga0495635_0073285
379 Ga0495659_0003623
380 Ga0495661_0151380
381 Ga0495588_0023720
382 Ga0495588_0139911
383 Ga0495624_0138300
384 Ga0495624_0480573
385 Ga0495670_0009197
386 Ga0495670_0022967
387 Ga0495589_0064926
388 Ga0495581_0024233
389 Ga0495636_0148805
390 Ga0495674_0198231
391 Ga0495676_0085583
392 Ga0495676_0385003
393 Ga0495593_0063044
394 Ga0496100_0081401
395 Ga0496103_0326597
396 Ga0496104_0110148
397 Ga0496107_0045961
398 Ga0496108_0246405
399 Ga0496109_0066267
400 Ga0496109_0469802
401 Ga0496110_0044168
402 Ga0496113_0046028
403 Ga0496114_0047891
404 Ga0496115_0010660
405 Ga0496115_0641440
406 Ga0501031_0007944
407 Ga0501031_0015032
408 Ga0501031_0075069
409 Ga0501032_0014916
410 Ga0501032_0092820
411 Ga0501033_0021277
412 Ga0501033_0081128
413 Ga0501033_0170903
414 Ga0501033_0228746
415 Ga0501036_0007942
416 Ga0501036_0021380
417 Ga0501036_0036967
418 Ga0501036_0082350
419 Ga0501037_0023946
420 Ga0501037_0120009
421 Ga0501037_0520346
422 Ga0501038_0027258
423 Ga0501038_0038152
424 Ga0501038_0697364
425 Ga0501039_0001109
426 Ga0501039_0006320
427 Ga0501039_0074315
428 Ga0501039_0142224
429 Ga0501040_0013265
430 Ga0501040_0026125
431 Ga0501040_0036345
432 Ga0501040_0351176
433 Ga0501041_0003453
434 Ga0501041_0013686
435 Ga0501041_0017383
436 Ga0501041_0042624
437 Ga0501042_0028353
438 Ga0501042_0031565
439 Ga0501042_0171459
440 Ga0501042_0269811
441 Ga0501043_0049191
442 Ga0501043_0124392
443 Ga0501043_0153893
444 Ga0501046_0014193
445 Ga0501046_0200340
446 Ga0501046_0239441
447 Ga0501047_0709289
448 Ga0501048_0007638
449 Ga0501048_0008710
450 Ga0501048_0021346
451 Ga0501048_0027913
452 Ga0501068_0006404
453 Ga0501068_0168549
454 Ga0501068_0170246
455 Ga0501069_0018086
456 Ga0501070_0022646
457 Ga0501070_0044790
458 Ga0501070_0064287
459 Ga0501071_0003789
460 Ga0501071_0025824
461 Ga0501071_0033823
462 Ga0501071_0078455
463 Ga0501072_0003055
464 Ga0501072_0005088
465 Ga0501072_0045670
466 Ga0501072_0128526
467 Ga0501072_0167043
468 Ga0501073_0083460
469 Ga0501074_0012741
470 Ga0501074_0079962
471 Ga0501074_0120604
472 Ga0501074_0706582
473 Ga0501075_0008578
474 Ga0501075_0028803
475 Ga0501075_0030246
476 Ga0501075_0043333
477 Ga0501076_0004242
478 Ga0501076_0031148
479 Ga0501076_0077294
480 Ga0501076_0115241
481 Ga0501077_0023231
482 Ga0501077_0029825
483 Ga0501077_0055459
484 Ga0501079_0007917
485 Ga0501079_0012015
486 Ga0501079_0035774
487 Ga0501079_0040378
488 Ga0501080_0005261
489 Ga0501080_0056059
490 Ga0501080_0192927
491 Ga0501081_0001036
492 Ga0501081_0002445
493 Ga0501081_0032771
494 Ga0501081_0073455
495 Ga0501083_0000027
496 Ga0501083_0005449
497 Ga0501083_0026319
498 Ga0501083_0420871
499 Ga0501035_0060305
500 Ga0501035_0070891
501 Ga0501044_0037757
502 Ga0501045_0004061
503 Ga0501045_0005682
504 Ga0501045_0027470
505 Ga0501045_0080711
506 nmdc:mga05p37_534_c1
507 nmdc:mga0qj67_8_c2
508 nmdc:mga06r32_1008695_c1
509 nmdc:mga06r32_1715_c1
510 Ga0495655_0003538
511 Ga0495619_0070638
512 Ga0500573_0018149
513 Ga0501084_0001744
514 Ga0501084_0048162
515 Ga0501084_0071380
516 Ga0501084_0093988
517 Ga0590075_010589
518 Ga0501082_0008051
519 Ga0501082_0008405
520 Ga0501082_0129930
521 Ga0501082_0268178
522 Ga0466962_0008173
523 Ga0466962_0099549
524 Ga0530510_0004966
525 Ga0530510_0008500
526 Ga0530510_0093504

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

156

212

0.97

PF00072

Response_reg

Response regulator receiver domain

5

119

0.96

PF04545

Sigma70_r4

Sigma-70, region 4

154

201

0.96

PF08281

Sigma70_r4_2

Sigma-70, region 4

152

200

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9777 143 207
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9759 145 207
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9732 143 207
1je8-assembly2.cif.gz_E two-component response regulator narl/dna complex: dna bending found in a high affinity site 0.9705 144 203
4wul-assembly1.cif.gz_B crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9702 146 207
ID Description Score Start End Superfamily
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9828 146 203 1.10.10.10
af_O53213_1064_1134_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9763 145 205 1.10.10.10
3eulC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.967 1 119 3.40.50.2300
4tmyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9596 1 118 3.40.50.2300
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9592 143 207 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A6L4AE68-F1-model_v4 Response regulator transcription factor 0.9824 1 122 GO:0000160
GO:0003677
AF-A0A5J4KNV9-F1-model_v4 Response regulatory domain-containing protein 0.9806 1 122 GO:0000160
GO:0003677
AF-A0A2T1F546-F1-model_v4 Response regulatory domain-containing protein 0.9805 1 122 GO:0000160
GO:0003677
GO:0016020
AF-A0A1X4HWI9-F1-model_v4 DNA-binding response regulator 0.9791 2 122 GO:0000160
GO:0003677
AF-A0A1Z4RV16-F1-model_v4 HlyD family secretion protein 0.9775 1 123 GO:0000160
GO:0016020

Map