F371439

General Info

Members Datasets Scaffolds Average Seq Length
262 202 524 287

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0036173|Ga0501044_0036173_3763_4713
Length 316
Sequence VKADGGVEYDPMKQRARGASRTAVLVCQGRAAADGRVATGRFADPVATQLLRAAERVSVDQVRASTPPQGWQARTAYESVRACAEVVVPRTVAIDEVLRARTTGQLVILGAGLDTRAWRLAELAQTDVWEVDHPASQRDKRARLAEAAHATRGPEEDSRPSAEPPAVARSVRFTPVDFAVDDLGAALDAAGHDPAAPTTWLWEGVVPYLTRDEVRATVAALAARSAPGSVLVVNYQAPSARAAVGRLLARVLGSSITSGEPWRSLWRPEQMAAVLAEHGLRVVSDDTLLSLAQQLGGPVPGRTSLKSGRVAVAESR

Samples

Sample ID Description Type Environment
1 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
78 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
131 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
132 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
133 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
139 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
142 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
143 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
144 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
145 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
146 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
147 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
148 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
151 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
152 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
153 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
154 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
155 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
156 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
163 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
164 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
165 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
166 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
167 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
168 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
169 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
170 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
171 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
177 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
189 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
192 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
193 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
194 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
195 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
196 2773857933 Frankia sp. BMG5.30 Isolate Nodule
197 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
198 2855683550 Micromonospora sp. RP3T Isolate Unclassified
199 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
200 2902582711 Micromonospora sp. AP08 Isolate Unclassified
201 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
202 3006393351 Streptomyces sp. SID4985 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.66
Metatranscriptomes 1.15
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0.76
Rhizoplane 8.4
Rhizosphere 86.26
Stem 0
Stem Tuber 0
Unclassified 4.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501044_0036173 3300049823 Bacteria 5166
2 Ga0070658_10092577 3300005327 Bacteria 2492
3 Ga0070683_100097963 3300005329 Bacteria 2759
4 Ga0070670_100050279 3300005331 Bacteria 3582
5 Ga0068869_100003790 3300005334 Bacteria 9315
6 Ga0068869_100119100 3300005334 Bacteria 2017
7 Ga0070666_10161812 3300005335 Bacteria 1565
8 Ga0070680_100125086 3300005336 Bacteria 2148
9 Ga0070680_100278803 3300005336 Bacteria 1416
10 Ga0070682_100002534 3300005337 Bacteria 10085
11 Ga0068868_100003200 3300005338 Bacteria 11394
12 Ga0070660_100095313 3300005339 Bacteria 2352
13 Ga0070660_100109613 3300005339 Bacteria 2195
14 Ga0070689_100026390 3300005340 Bacteria 4373
15 Ga0070691_10018962 3300005341 Bacteria 3170
16 Ga0070687_100050457 3300005343 Bacteria 2149
17 Ga0070692_10004930 3300005345 Bacteria 5628
18 Ga0070692_10029340 3300005345 Bacteria 2741
19 Ga0070668_100000625 3300005347 Bacteria 23783
20 Ga0070668_100134218 3300005347 Bacteria 1989
21 Ga0070675_100001370 3300005354 Bacteria 17869
22 Ga0070675_100253315 3300005354 Bacteria 1541
23 Ga0070671_100002814 3300005355 Bacteria 13518
24 Ga0070671_100519861 3300005355 Bacteria 1025
25 Ga0070673_100021331 3300005364 Bacteria 4694
26 Ga0070688_100384926 3300005365 Bacteria 1035
27 Ga0070659_100057340 3300005366 Bacteria 3071
28 Ga0070700_100083616 3300005441 Bacteria 2067
29 Ga0070663_100009540 3300005455 Bacteria 6014
30 Ga0070678_100015424 3300005456 Bacteria 4858
31 Ga0070678_100273886 3300005456 Bacteria 1424
32 Ga0070681_10326347 3300005458 Bacteria 1444
33 Ga0070706_100062943 3300005467 Unclassified 3428
34 Ga0070679_100028244 3300005530 Bacteria 5530
35 Ga0070684_100018096 3300005535 Bacteria 5795
36 Ga0070684_100398995 3300005535 Bacteria 1268
37 Ga0068853_100039008 3300005539 Bacteria 4049
38 Ga0070672_100166365 3300005543 Bacteria 1832
39 Ga0070693_100000714 3300005547 Bacteria 14647
40 Ga0070665_100084126 3300005548 Bacteria 3187
41 Ga0070704_100118877 3300005549 Bacteria 2026
42 Ga0070664_100000166 3300005564 Bacteria 45730
43 Ga0068857_100013922 3300005577 Bacteria 7000
44 Ga0068857_100109711 3300005577 Bacteria 2479
45 Ga0068857_100154650 3300005577 Unclassified 2079
46 Ga0068854_100031096 3300005578 Bacteria 3708
47 Ga0068856_100075847 3300005614 Bacteria 3331
48 Ga0070702_100000203 3300005615 Bacteria 19485
49 Ga0068852_100135485 3300005616 Bacteria 2273
50 Ga0068859_100340996 3300005617 Bacteria 1593
51 Ga0068861_100160874 3300005719 Bacteria 1852
52 Ga0068861_100320717 3300005719 Bacteria 1349
53 Ga0068851_10002679 3300005834 Bacteria 7845
54 Ga0068870_10006804 3300005840 Bacteria 5068
55 Ga0068863_100005921 3300005841 Bacteria 11992
56 Ga0068858_100011496 3300005842 Bacteria 8354
57 Ga0068858_100018170 3300005842 Bacteria 6587
58 Ga0068858_100064751 3300005842 Bacteria 3383
59 Ga0068860_100002963 3300005843 Bacteria 17521
60 Ga0068860_100240662 3300005843 Bacteria 1760
61 Ga0068862_100072540 3300005844 Bacteria 2974
62 Ga0068862_100286608 3300005844 Bacteria 1511
63 Ga0081455_10073387 3300005937 Bacteria 2829
64 Ga0081455_10075073 3300005937 Unclassified 2790
65 Ga0081455_10102927 3300005937 Unclassified 2288
66 Ga0068871_100421179 3300006358 Bacteria 1192
67 Ga0075431_100192473 3300006847 Bacteria 2089
68 Ga0075433_10049476 3300006852 Bacteria 3657
69 Ga0075434_100010454 3300006871 Bacteria 8700
70 Ga0075429_100151249 3300006880 Bacteria 2032
71 Ga0075429_100306780 3300006880 Bacteria 1390
72 Ga0075436_100049416 3300006914 Bacteria 2902
73 Ga0097620_100341006 3300006931 Bacteria 1593
74 Ga0075435_100003714 3300007076 Bacteria 10396
75 Ga0111539_10000110 3300009094 Bacteria 89582
76 Ga0111539_10053945 3300009094 Bacteria 4785
77 Ga0105245_10050726 3300009098 Bacteria 3719
78 Ga0105247_10138938 3300009101 Bacteria 1590
79 Ga0114129_10054178 3300009147 Bacteria 5625
80 Ga0105243_10403602 3300009148 Bacteria 1270
81 Ga0105243_10517853 3300009148 Bacteria 1134
82 Ga0105241_10010886 3300009174 Bacteria 6673
83 Ga0105242_10034663 3300009176 Bacteria 4047
84 Ga0105248_10054928 3300009177 Bacteria 4467
85 Ga0105238_10061381 3300009551 Bacteria 3762
86 Ga0105249_10316628 3300009553 Bacteria 1570
87 Ga0105249_10381141 3300009553 Unclassified 1436
88 Ga0105249_10485040 3300009553 Bacteria 1279
89 Ga0105246_10015368 3300011119 Bacteria 4834
90 Ga0157373_10222003 3300013100 Bacteria 1333
91 Ga0157371_10012050 3300013102 Bacteria 6629
92 Ga0157378_10445673 3300013297 Bacteria 1284
93 Ga0157372_10180113 3300013307 Bacteria 2446
94 Ga0157375_10069637 3300013308 Bacteria 3525
95 Ga0157375_10072864 3300013308 Bacteria 3452
96 Ga0157375_10305143 3300013308 Bacteria 1756
97 Ga0163163_10190827 3300014325 Bacteria 2097
98 Ga0157379_10063044 3300014968 Bacteria 3314
99 Ga0163161_10015940 3300017792 Bacteria 5244
100 Ga0163161_10033397 3300017792 Bacteria 3677
101 Ga0206354_11288075 3300020081 Bacteria 2553
102 Ga0206353_10512591 3300020082 Bacteria 3088
103 Ga0206353_10638110 3300020082 Bacteria 1035
104 Ga0213875_10028382 3300021388 Bacteria 2658
105 Ga0207656_10007166 3300025321 Bacteria 4051
106 Ga0207710_10097731 3300025900 Bacteria 1382
107 Ga0207688_10001747 3300025901 Bacteria 11534
108 Ga0207680_10039088 3300025903 Bacteria 2750
109 Ga0207643_10000202 3300025908 Bacteria 41336
110 Ga0207705_10288405 3300025909 Bacteria 1257
111 Ga0207654_10009361 3300025911 Bacteria 4975
112 Ga0207707_10079639 3300025912 Bacteria 2861
113 Ga0207660_10045682 3300025917 Bacteria 3086
114 Ga0207657_10114651 3300025919 Bacteria 2222
115 Ga0207657_10257064 3300025919 Bacteria 1391
116 Ga0207649_10039533 3300025920 Bacteria 2861
117 Ga0207652_10013623 3300025921 Bacteria 6575
118 Ga0207650_10003889 3300025925 Bacteria 10207
119 Ga0207659_10005965 3300025926 Bacteria 7435
120 Ga0207659_10008530 3300025926 Bacteria 6371
121 Ga0207687_10012816 3300025927 Bacteria 5479
122 Ga0207644_10042107 3300025931 Bacteria 3234
123 Ga0207690_10098412 3300025932 Bacteria 2083
124 Ga0207706_10036408 3300025933 Bacteria 4371
125 Ga0207670_10087623 3300025936 Bacteria 2193
126 Ga0207704_10149706 3300025938 Bacteria 1645
127 Ga0207691_10065906 3300025940 Bacteria 3277
128 Ga0207691_10150320 3300025940 Bacteria 2048
129 Ga0207689_10002009 3300025942 Bacteria 19209
130 Ga0207689_10135589 3300025942 Bacteria 2027
131 Ga0207661_10007171 3300025944 Bacteria 7919
132 Ga0207661_10115363 3300025944 Bacteria 2278
133 Ga0207661_10206117 3300025944 Bacteria 1731
134 Ga0207661_10336956 3300025944 Bacteria 1358
135 Ga0207679_10004342 3300025945 Bacteria 8820
136 Ga0207667_10274186 3300025949 Bacteria 1724
137 Ga0207651_10213300 3300025960 Bacteria 1556
138 Ga0207651_10361274 3300025960 Bacteria 1225
139 Ga0207712_10110020 3300025961 Bacteria 2065
140 Ga0207668_10003599 3300025972 Bacteria 9106
141 Ga0207677_10099741 3300026023 Bacteria 2133
142 Ga0207703_10046907 3300026035 Bacteria 3482
143 Ga0207703_10116708 3300026035 Bacteria 2285
144 Ga0207678_10000917 3300026067 Bacteria 26978
145 Ga0207678_10018850 3300026067 Bacteria 6061
146 Ga0207708_10011259 3300026075 Bacteria 6656
147 Ga0207702_10001104 3300026078 Bacteria 27582
148 Ga0207641_10116702 3300026088 Bacteria 2375
149 Ga0207641_10379901 3300026088 Bacteria 1353
150 Ga0207676_10009799 3300026095 Bacteria 6813
151 Ga0207674_10001699 3300026116 Bacteria 28201
152 Ga0207675_100106789 3300026118 Bacteria 2640
153 Ga0207683_10001184 3300026121 Bacteria 23625
154 Ga0207683_10462201 3300026121 Bacteria 1170
155 Ga0207698_10007802 3300026142 Bacteria 6727
156 Ga0207698_10110940 3300026142 Bacteria 2299
157 Ga0207428_10008322 3300027907 Bacteria 9373
158 Ga0207428_10008990 3300027907 Bacteria 9000
159 Ga0268266_10048827 3300028379 Bacteria 3628
160 Ga0268265_10055362 3300028380 Bacteria 3013
161 Ga0268264_10057477 3300028381 Unclassified 3254
162 Ga0268264_10196810 3300028381 Bacteria 1841
163 Ga0307513_10182473 3300031456 Bacteria 1960
164 Ga0307509_10011716 3300031507 Bacteria 10580
165 Ga0307408_100134295 3300031548 Unclassified 1934
166 Ga0307405_10254524 3300031731 Unclassified 1308
167 Ga0307410_10073596 3300031852 Bacteria 2376
168 Ga0307412_10461468 3300031911 Bacteria 1049
169 Ga0307409_100030185 3300031995 Bacteria 3891
170 Ga0307416_100025298 3300032002 Bacteria 4349
171 Ga0307416_100180663 3300032002 Unclassified 1977
172 Ga0307414_10038601 3300032004 Bacteria 3209
173 Ga0307507_10045282 3300033179 Bacteria 4331
174 Ga0373951_0000075 3300035091 Bacteria 39283
175 Ga0373935_0026683 3300035692 Bacteria 3568
176 Ga0373927_0043089 3300035695 Bacteria 2923
177 Ga0395900_0068441 3300037418 Bacteria 3649
178 Ga0395900_0679629 3300037418 Bacteria 964
179 Ga0395898_0017550 3300037466 Bacteria 7305
180 Ga0436364_0001683 3300037853 Bacteria 4173
181 Ga0395901_0033323 3300038443 Bacteria 5318
182 Ga0451855_0297454 3300041511 Bacteria 1132
183 Ga0466968_0023925 3300044735 Bacteria 2493
184 Ga0466967_0089424 3300045976 Bacteria 2796
185 Ga0495603_0030119 3300046455 Bacteria 3270
186 Ga0495603_0033853 3300046455 Bacteria 3074
187 Ga0495629_0120338 3300046459 Bacteria 1829
188 Ga0495629_0316702 3300046459 Bacteria 1067
189 Ga0495641_0074994 3300046461 Bacteria 1517
190 Ga0495580_0323422 3300046472 Bacteria 1048
191 Ga0495662_0077816 3300046476 Bacteria 1611
192 Ga0495585_0096038 3300046492 Bacteria 1591
193 Ga0495607_0137501 3300046501 Bacteria 1264
194 Ga0495628_0037617 3300046516 Bacteria 3880
195 Ga0495652_0135765 3300046529 Bacteria 1941
196 Ga0495640_0002862 3300046533 Bacteria 13897
197 Ga0495656_0051820 3300046615 Bacteria 1758
198 Ga0495588_0013245 3300046674 Bacteria 3925
199 Ga0495588_0186433 3300046674 Bacteria 1096
200 Ga0495657_0002286 3300046675 Bacteria 16185
201 Ga0495613_0224240 3300046689 Bacteria 1318
202 Ga0495649_0230204 3300046694 Bacteria 957
203 Ga0495636_0021122 3300047318 Bacteria 2627
204 Ga0495674_0183123 3300047319 Bacteria 1744
205 Ga0495683_0000189 3300047323 Bacteria 59252
206 Ga0495675_0198006 3300047444 Bacteria 1224
207 Ga0495681_0103951 3300047470 Bacteria 1238
208 Ga0495593_0001528 3300047673 Bacteria 13621
209 Ga0495614_0029289 3300048089 Bacteria 2370
210 Ga0496100_0067288 3300048903 Unclassified 2379
211 Ga0496100_0098388 3300048903 Bacteria 2011
212 Ga0496101_0083623 3300048904 Bacteria 2363
213 Ga0496102_0011508 3300048905 Bacteria 7631
214 Ga0496102_0015031 3300048905 Bacteria 6737
215 Ga0496102_0153222 3300048905 Bacteria 2166
216 Ga0496102_0480450 3300048905 Bacteria 1164
217 Ga0496104_0002342 3300048907 Bacteria 16376
218 Ga0496104_0095582 3300048907 Bacteria 2843
219 Ga0496105_0032654 3300048908 Bacteria 4273
220 Ga0496106_0007983 3300048909 Bacteria 7821
221 Ga0496107_0029230 3300048910 Bacteria 3920
222 Ga0496108_0089327 3300048911 Bacteria 2618
223 Ga0496109_0104216 3300048912 Bacteria 2633
224 Ga0496109_0272435 3300048912 Bacteria 1595
225 Ga0496110_0147431 3300048913 Bacteria 2129
226 Ga0496111_0006147 3300048914 Bacteria 7770
227 Ga0496113_0669268 3300048916 Bacteria 829
228 Ga0496114_0253247 3300048917 Bacteria 1549
229 Ga0496114_0404576 3300048917 Bacteria 1209
230 Ga0496114_0468766 3300048917 Bacteria 1114
231 Ga0496115_0125658 3300048918 Bacteria 2113
232 Ga0501031_0029268 3300049568 Bacteria 3593
233 Ga0501032_0001352 3300049569 Bacteria 19486
234 Ga0501034_0104352 3300049571 Bacteria 2828
235 Ga0501037_0004330 3300049573 Bacteria 10302
236 Ga0501043_0018172 3300049579 Bacteria 5513
237 Ga0501035_0112704 3300049822 Bacteria 2383
238 Ga0501044_0001080 3300049823 Bacteria 32578
239 nmdc:mga05p37_55876_c1 3300050507 Bacteria 4860
240 nmdc:mga0qj67_293912_c1 3300050509 Bacteria 1316
241 nmdc:mga0qj67_72569_c1 3300050509 Bacteria 2748
242 nmdc:mga06r32_103904_c1 3300050510 Bacteria 2790
243 nmdc:mga06r32_572657_c1 3300050510 Bacteria 1102
244 nmdc:mga08y16_14826_c1 3300050511 Bacteria 8196
245 nmdc:mga08y16_265020_c1 3300050511 Unclassified 1774
246 nmdc:mga08y16_4166_c1 3300050511 Bacteria 15097
247 nmdc:mga0n895_23815_c1 3300050512 Bacteria 5761
248 nmdc:mga0rr50_8685_c1 3300050513 Bacteria 6336
249 nmdc:mga08x19_76923_c1 3300050514 Bacteria 2185
250 nmdc:mga0a205_60979_c1 3300050515 Bacteria 3643
251 Ga0500616_0001670 3300053153 Bacteria 20457
252 2616701948 2616644814 Bacteria 11555299
253 2686534343 2684623035 Bacteria 8032739
254 2689993411 2687453743 Bacteria 8361025
255 2753267887 2751185782 Bacteria 11227053
256 2774904852 2773857933 Bacteria 5818019
257 2808917007 2808606375 Bacteria 9466072
258 2855683811 2855683550 Bacteria 7134265
259 2895888758 2895880812 Bacteria 11255272
260 2902585093 2902582711 Bacteria 6187705
261 2912730973 2912723979 Bacteria 8557534
262 3006398081 3006393351 Bacteria 6615579
263 Ga0501044_0036173
264 Ga0070658_10092577
265 Ga0070683_100097963
266 Ga0070670_100050279
267 Ga0068869_100003790
268 Ga0068869_100119100
269 Ga0070666_10161812
270 Ga0070680_100125086
271 Ga0070680_100278803
272 Ga0070682_100002534
273 Ga0068868_100003200
274 Ga0070660_100095313
275 Ga0070660_100109613
276 Ga0070689_100026390
277 Ga0070691_10018962
278 Ga0070687_100050457
279 Ga0070692_10004930
280 Ga0070692_10029340
281 Ga0070668_100000625
282 Ga0070668_100134218
283 Ga0070675_100001370
284 Ga0070675_100253315
285 Ga0070671_100002814
286 Ga0070671_100519861
287 Ga0070673_100021331
288 Ga0070688_100384926
289 Ga0070659_100057340
290 Ga0070700_100083616
291 Ga0070663_100009540
292 Ga0070678_100015424
293 Ga0070678_100273886
294 Ga0070681_10326347
295 Ga0070706_100062943
296 Ga0070679_100028244
297 Ga0070684_100018096
298 Ga0070684_100398995
299 Ga0068853_100039008
300 Ga0070672_100166365
301 Ga0070693_100000714
302 Ga0070665_100084126
303 Ga0070704_100118877
304 Ga0070664_100000166
305 Ga0068857_100013922
306 Ga0068857_100109711
307 Ga0068857_100154650
308 Ga0068854_100031096
309 Ga0068856_100075847
310 Ga0070702_100000203
311 Ga0068852_100135485
312 Ga0068859_100340996
313 Ga0068861_100160874
314 Ga0068861_100320717
315 Ga0068851_10002679
316 Ga0068870_10006804
317 Ga0068863_100005921
318 Ga0068858_100011496
319 Ga0068858_100018170
320 Ga0068858_100064751
321 Ga0068860_100002963
322 Ga0068860_100240662
323 Ga0068862_100072540
324 Ga0068862_100286608
325 Ga0081455_10073387
326 Ga0081455_10075073
327 Ga0081455_10102927
328 Ga0068871_100421179
329 Ga0075431_100192473
330 Ga0075433_10049476
331 Ga0075434_100010454
332 Ga0075429_100151249
333 Ga0075429_100306780
334 Ga0075436_100049416
335 Ga0097620_100341006
336 Ga0075435_100003714
337 Ga0111539_10000110
338 Ga0111539_10053945
339 Ga0105245_10050726
340 Ga0105247_10138938
341 Ga0114129_10054178
342 Ga0105243_10403602
343 Ga0105243_10517853
344 Ga0105241_10010886
345 Ga0105242_10034663
346 Ga0105248_10054928
347 Ga0105238_10061381
348 Ga0105249_10316628
349 Ga0105249_10381141
350 Ga0105249_10485040
351 Ga0105246_10015368
352 Ga0157373_10222003
353 Ga0157371_10012050
354 Ga0157378_10445673
355 Ga0157372_10180113
356 Ga0157375_10069637
357 Ga0157375_10072864
358 Ga0157375_10305143
359 Ga0163163_10190827
360 Ga0157379_10063044
361 Ga0163161_10015940
362 Ga0163161_10033397
363 Ga0206354_11288075
364 Ga0206353_10512591
365 Ga0206353_10638110
366 Ga0213875_10028382
367 Ga0207656_10007166
368 Ga0207710_10097731
369 Ga0207688_10001747
370 Ga0207680_10039088
371 Ga0207643_10000202
372 Ga0207705_10288405
373 Ga0207654_10009361
374 Ga0207707_10079639
375 Ga0207660_10045682
376 Ga0207657_10114651
377 Ga0207657_10257064
378 Ga0207649_10039533
379 Ga0207652_10013623
380 Ga0207650_10003889
381 Ga0207659_10005965
382 Ga0207659_10008530
383 Ga0207687_10012816
384 Ga0207644_10042107
385 Ga0207690_10098412
386 Ga0207706_10036408
387 Ga0207670_10087623
388 Ga0207704_10149706
389 Ga0207691_10065906
390 Ga0207691_10150320
391 Ga0207689_10002009
392 Ga0207689_10135589
393 Ga0207661_10007171
394 Ga0207661_10115363
395 Ga0207661_10206117
396 Ga0207661_10336956
397 Ga0207679_10004342
398 Ga0207667_10274186
399 Ga0207651_10213300
400 Ga0207651_10361274
401 Ga0207712_10110020
402 Ga0207668_10003599
403 Ga0207677_10099741
404 Ga0207703_10046907
405 Ga0207703_10116708
406 Ga0207678_10000917
407 Ga0207678_10018850
408 Ga0207708_10011259
409 Ga0207702_10001104
410 Ga0207641_10116702
411 Ga0207641_10379901
412 Ga0207676_10009799
413 Ga0207674_10001699
414 Ga0207675_100106789
415 Ga0207683_10001184
416 Ga0207683_10462201
417 Ga0207698_10007802
418 Ga0207698_10110940
419 Ga0207428_10008322
420 Ga0207428_10008990
421 Ga0268266_10048827
422 Ga0268265_10055362
423 Ga0268264_10057477
424 Ga0268264_10196810
425 Ga0307513_10182473
426 Ga0307509_10011716
427 Ga0307408_100134295
428 Ga0307405_10254524
429 Ga0307410_10073596
430 Ga0307412_10461468
431 Ga0307409_100030185
432 Ga0307416_100025298
433 Ga0307416_100180663
434 Ga0307414_10038601
435 Ga0307507_10045282
436 Ga0373951_0000075
437 Ga0373935_0026683
438 Ga0373927_0043089
439 Ga0395900_0068441
440 Ga0395900_0679629
441 Ga0395898_0017550
442 Ga0436364_0001683
443 Ga0395901_0033323
444 Ga0451855_0297454
445 Ga0466968_0023925
446 Ga0466967_0089424
447 Ga0495603_0030119
448 Ga0495603_0033853
449 Ga0495629_0120338
450 Ga0495629_0316702
451 Ga0495641_0074994
452 Ga0495580_0323422
453 Ga0495662_0077816
454 Ga0495585_0096038
455 Ga0495607_0137501
456 Ga0495628_0037617
457 Ga0495652_0135765
458 Ga0495640_0002862
459 Ga0495656_0051820
460 Ga0495588_0013245
461 Ga0495588_0186433
462 Ga0495657_0002286
463 Ga0495613_0224240
464 Ga0495649_0230204
465 Ga0495636_0021122
466 Ga0495674_0183123
467 Ga0495683_0000189
468 Ga0495675_0198006
469 Ga0495681_0103951
470 Ga0495593_0001528
471 Ga0495614_0029289
472 Ga0496100_0067288
473 Ga0496100_0098388
474 Ga0496101_0083623
475 Ga0496102_0011508
476 Ga0496102_0015031
477 Ga0496102_0153222
478 Ga0496102_0480450
479 Ga0496104_0002342
480 Ga0496104_0095582
481 Ga0496105_0032654
482 Ga0496106_0007983
483 Ga0496107_0029230
484 Ga0496108_0089327
485 Ga0496109_0104216
486 Ga0496109_0272435
487 Ga0496110_0147431
488 Ga0496111_0006147
489 Ga0496113_0669268
490 Ga0496114_0253247
491 Ga0496114_0404576
492 Ga0496114_0468766
493 Ga0496115_0125658
494 Ga0501031_0029268
495 Ga0501032_0001352
496 Ga0501034_0104352
497 Ga0501037_0004330
498 Ga0501043_0018172
499 Ga0501035_0112704
500 Ga0501044_0001080
501 nmdc:mga05p37_55876_c1
502 nmdc:mga0qj67_293912_c1
503 nmdc:mga0qj67_72569_c1
504 nmdc:mga06r32_103904_c1
505 nmdc:mga06r32_572657_c1
506 nmdc:mga08y16_14826_c1
507 nmdc:mga08y16_265020_c1
508 nmdc:mga08y16_4166_c1
509 nmdc:mga0n895_23815_c1
510 nmdc:mga0rr50_8685_c1
511 nmdc:mga08x19_76923_c1
512 nmdc:mga0a205_60979_c1
513 Ga0500616_0001670
514 2616701948
515 2686534343
516 2689993411
517 2753267887
518 2774904852
519 2808917007
520 2855683811
521 2895888758
522 2902585093
523 2912730973
524 3006398081

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04072

LCM

Leucine carboxyl methyltransferase

23

222

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6id6-assembly1.cif.gz_A crystal structure of rv0731c from mycobacterium tuberculosis at 1.63 angstroms. 0.7683 2 281
3cgg-assembly2.cif.gz_B crystal structure of tehb-like sam-dependent methyltransferase (np_600671.1) from corynebacterium glutamicum atcc 13032 kitasato at 2.00 a resolution 0.7639 71 281
6id6-assembly1.cif.gz_A crystal structure of rv0731c from mycobacterium tuberculosis at 1.63 angstroms. 0.7635 2 281
7ezg-assembly1.cif.gz_A the structure of the human mettl6 enzyme in complex with sah 0.7335 82 280
2i6g-assembly1.cif.gz_A crystal structure of a putative methyltransferase (tehb, stm1608) from salmonella typhimurium lt2 at 1.90 a resolution 0.7294 70 281
ID Description Score Start End Superfamily
af_Q54NV3_191_506_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9114 64 200 3.40.50.150
af_P9WFI1_1_301_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8163 2 281 3.40.50.150
af_P9WFI1_1_301_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.811 2 281 3.40.50.150
af_P9WFH5_2_312_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8034 2 281 3.40.50.150
af_Q9P3E7_8_144_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8034 80 194 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A853CIE9-F1-model_v4 S-adenosyl-L-methionine-dependent methyltransferase (EC 2.1.1.-) 0.9794 2 281 GO:0008168
GO:0032259
AF-A0A853CIE9-F1-model_v4 S-adenosyl-L-methionine-dependent methyltransferase (EC 2.1.1.-) 0.9691 2 281 GO:0008168
GO:0032259
AF-A0A7D6ZUF1-F1-model_v4 S-adenosyl-L-methionine-dependent methyltransferase (EC 2.1.1.-) 0.9679 2 281 GO:0008168
GO:0032259
AF-A0A7D6ZUF1-F1-model_v4 S-adenosyl-L-methionine-dependent methyltransferase (EC 2.1.1.-) 0.9612 2 281 GO:0008168
GO:0032259
AF-A0A6B1K724-F1-model_v4 deleted 0.9548 2 240

Map